Pregenerated sensors for PTPRCAP (Homo sapiens)
Ensembl gene IDs: ENSG00000213402Ensembl transcript IDs: ENST00000326294.4
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCATGGTCATGTGGGCTGGGGGTCCAGTCCAGCCATGGCATCTTaGGAAGCAGAGGCACGGGGAGTGAGCGGCTGTGACAGGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: RHGHVGWGSSPAMAS*EAEARGVSGCDRDG Trigger: CCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGCTTCCCAAGATGCCATGGCTGGACTGGACCCCCAGCCCACATGACCATGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| 3UTR CCA 90 bp | TGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGCTaGGGGTCCAGTCCAGCCATGGCATCTTGGGAAGCAGAGGCACGG | + |
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Preference number: 1 (lower is better) Translates to: WELVGGDSLRHGHVG*GSSPAMASWEAEAR Trigger: CCGTGCCTCTGCTTCCCAAGATGCCATGGCTGGACTGGACCCCCAGCCCACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCGTTCCCGTGGTGAGCGGGGTACACATGGACTTGGGAACTGGTAGGGGGGGTCCAGTCCAGCCATaGCATCTTGGGAAGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GAVPVVSGVHMDLGTGRGGPVQP*HLGKQR Trigger: CCTCTGCTTCCCAAGATGCCATGGCTGGACTGGACC...CCCCCTACCAGTTCCCAAGTCCATGTGTACCCCGCTCACCACGGGAACGGCCCC 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| 3UTR-3UTR TCA 90 bp | GGGTACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATCAGAGGCACGGGGAGTaGGCGGCTGTGACAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: GYTWTWELVGGDSLRHGHQRHGE*AAVTGM Trigger: CATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTG...ATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| 3UTR-3UTR TCA 90 bp | GGGTACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGGGAGTGAGCGGCTGTaGCAGGGATGGGACACCAAG | + |
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Preference number: 2 (lower is better) Translates to: GYTWTWELVGGDSLRHGHGSERL*QGWDTK Trigger: CTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCC...ATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| 3UTR CCA 72 bp | CATGTGGGCTGGGGGTCCAGTCCAGCCATGGCATCTTaGGAAGCAGAGGCACGGGGAGTGAGCGGCTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: HVGWGSSPAMAS*EAEARGVSGCD Trigger: GTCACAGCCGCTCACTCCCCGTGCCTCTGCTTCCCAAGATGCCATGGCTGGACTGGACCCCCAGCCCACATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| 3UTR CCA 72 bp | GTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGCTaGGGGTCCAGTCCAGCCATGGCATCTTGGGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: VGGDSLRHGHVG*GSSPAMASWEA Trigger: TGCTTCCCAAGATGCCATGGCTGGACTGGACCCCCAGCCCACATGACCATGCCTCAGACTGTCACCCCCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | GCAGAGGCACGGGGAGTGAGCGGCTGTGACAGGGATGGGACACCAAGACCGGCCCGAGCCCAAGGCCCCTaGCAGGGCCAGCAGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: AEARGVSGCDRDGTPRPARAQGP*QGQQHP Trigger: GGGATGCTGCTGGCCCTGCCAGGGGCCTTGGGCTCG...GGCCGGTCTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR TCA 90 bp | GCAGAGGCACGGGGAGTGAGCGGCTGTGACAGGGATGGGACACCAAGACCGGCCGCAGCAGGACAACGGTaGCAGAGCTGGAGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: AEARGVSGCDRDGTPRPAAAGQR*QSWSPR Trigger: GCGTGGGCTCCAGCTCTGTCACCGTTGTCCTGCTGC...GGCCGGTCTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR TCA 90 bp | GGGGCCGTTCCCGTGGTGAGCGGGGTACACATGGACTTGGGAACTGGTAGGGGGGTGGTAGTAGCCCCCTaGGTCACGGCTGAGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: GAVPVVSGVHMDLGTGRGVVVAP*VTAEAA Trigger: CGCCGCCTCAGCCGTGACTCAGGGGGCTACTACCAC...CCCCCTACCAGTTCCCAAGTCCATGTGTACCCCGCTCACCACGGGAACGGCCCC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR TCA 90 bp | GCAGAGGCACGGGGAGTGAGCGGCTGTGACAGGGATGGGACACCAAGACCGGCCCAGAGGCACGGGGAGTaGGCGGCTGTGACAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: AEARGVSGCDRDGTPRPAQRHGE*AAVTGM Trigger: CATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTG...GGCCGGTCTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | CAGTCTGAGGCATGGTCATGTGGGCTGGGGGTCCAGTCCAGCCATGGCATCTTGGTGACATGGAGGCCCTaGCCCCCAGCTGCCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QSEAWSCGLGVQSSHGILVTWRP*PPAALA Trigger: CGCCAGGGCAGCTGGGGGCCAGGGCCTCCATGTCAC...CAAGATGCCATGGCTGGACTGGACCCCCAGCCCACATGACCATGCCTCAGACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR TCA 90 bp | ACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGCCCCCTGAGTCACGGCTaGGGCGGCGCCAGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TWTWELVGGDSLRHGHVGPLSHG*GGARPV Trigger: CACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGG...GCCCACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | CAGTCTGAGGCATGGTCATGTGGGCTGGGGGTCCAGTCCAGCCATGGCATCTTGGCAGGGCAGAGCCATTaGTCCGCAGGCCCCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: QSEAWSCGLGVQSSHGILAGQSH*SAGPSV Trigger: CACGGAGGGGCCTGCGGACCAATGGCTCTGCCCTGC...CAAGATGCCATGGCTGGACTGGACCCCCAGCCCACATGACCATGCCTCAGACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAGCAGAGGCACGGGGAGTGAGCGGCTGTGACAGGGATGGGACACCAAGACACGGGGACCTGCTCTaGGCTGGACGCCTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: WEAEARGVSGCDRDGTPRHGDLL*AGRLST Trigger: TGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTG...TCTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGCTTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR TCA 90 bp | GGGGCCGTTCCCGTGGTGAGCGGGGTACACATGGACTTGGGAACTGGTAGGGGGGGAACTGGTAGGGGGTaGCAGTCTGAGGCATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GAVPVVSGVHMDLGTGRGGTGRG*QSEAWS Trigger: TGACCATGCCTCAGACTGTCACCCCCTACCAGTTCC...CCCCCTACCAGTTCCCAAGTCCATGTGTACCCCGCTCACCACGGGAACGGCCCC 63% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | GGGGCCGTTCCCGTGGTGAGCGGGGTACACATGGACTTGGGAACTGGTAGGGGGCAAGGTCATTGTCTGTaGACCCCAGCTCAGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GAVPVVSGVHMDLGTGRGQGHCL*TPAQLG Trigger: CCCGAGCTGAGCTGGGGTCCACAGACAATGACCTTG...CCCCCTACCAGTTCCCAAGTCCATGTGTACCCCGCTCACCACGGGAACGGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | CAGTCTGAGGCATGGTCATGTGGGCTGGGGGTCCAGTCCAGCCATGGCATCTTGCCGTGTCACTGTCTCTaGCTTCCTCAGCCCGCACGG | + |
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Preference number: 4 (lower is better) Translates to: QSEAWSCGLGVQSSHGILPCHCL*LPQPAR Trigger: CCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGG...CAAGATGCCATGGCTGGACTGGACCCCCAGCCCACATGACCATGCCTCAGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAGCAGAGGCACGGGGAGTGAGCGGCTGTGACAGGGATGGGACACCAAGAACCCACCTCCAGCTCTaGCTGTGTCGAGCGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: WEAEARGVSGCDRDGTPRTHLQL*LCRARS Trigger: ACTTCTCGCTCGACACAGCCAGAGCTGGAGGTGGGT...TCTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGCTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | TACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGCCCCCAGCTGCCCTaGCGCTGTCATCCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: YTWTWELVGGDSLRHGHVGPQLP*RCHPRL Trigger: CAGCCTGGGATGACAGCGCCAGGGCAGCTGGGGGCC...CACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR TCA 90 bp | TACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGCCTCTACAGTGCGGTaGCATGGAGGCCCTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: YTWTWELVGGDSLRHGHVASTVR*HGGPGP Trigger: GGGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGC...CACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR TCA 90 bp | ACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGCGGGAGTGAGCGGCTGTaGCAGGGATGGGACACCAAG | + |
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Preference number: 4 (lower is better) Translates to: TWTWELVGGDSLRHGHVGGSERL*QGWDTK Trigger: CTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCC...GCCCACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR TCA 90 bp | GGGTACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGGGCCGTTCCCGTGGTaGGCGGGGTACACATGGACT | + |
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Preference number: 4 (lower is better) Translates to: GYTWTWELVGGDSLRHGHGPFPW*AGYTWT Trigger: AGTCCATGTGTACCCCGCTCACCACGGGAACGGCCC...ATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR GCA 90 bp | ACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGCTCCCGAGCCCTAAGGTaGAGGGCAGAGCCATTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TWTWELVGGDSLRHGHVGSRALR*RAEPLV Trigger: GACCAATGGCTCTGCCCTGCACCTTAGGGCTCGGGA...GCCCACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | ACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGCGGACCTGCTCTGGGCTaGACGCCTCTCCACATTGCT | + |
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Preference number: 4 (lower is better) Translates to: TWTWELVGGDSLRHGHVGGPALG*TPLHIA Trigger: AGCAATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCC...GCCCACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | TACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGTACAGTGCGGTGACATaGAGGCCCTGGCCCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: YTWTWELVGGDSLRHGHVYSAVT*RPWPPA Trigger: AGCTGGGGGCCAGGGCCTCCATGTCACCGCACTGTA...CACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | GGGTACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATCCAGCCATGGCATCTTaGGAAGCAGAGGCACGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GYTWTWELVGGDSLRHGHPAMAS*EAEARG Trigger: TCCCCGTGCCTCTGCTTCCCAAGATGCCATGGCTGG...ATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | TACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGCCAGTGCTAGGCCAGTaGCCAGCAGTAGGAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YTWTWELVGGDSLRHGHVPVLGQ*PAVGAA Trigger: TGCTGCTCCTACTGCTGGCCACTGGCCTAGCACTGG...CACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CCA 90 bp | TACACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGTCCAGTCCAGCCATaGCATCTTGGGAAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: YTWTWELVGGDSLRHGHVGPVQP*HLGKQR Trigger: CCTCTGCTTCCCAAGATGCCATGGCTGGACTGGACC...CACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS-3UTR CAA 90 bp | ACATGGACTTGGGAACTGGTAGGGGGTGACAGTCTGAGGCATGGTCATGTGGGCTGCAGGGCAGAGCCATaGGTCCGCAGGCCCCTCCGT | + |
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Preference number: 5 (lower is better) Translates to: TWTWELVGGDSLRHGHVGCRAEP*VRRPLR Trigger: ACGGAGGGGCCTGCGGACCAATGGCTCTGCCCTGCA...GCCCACATGACCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS GCA 72 bp | GTGCAGGGCAGAGCCATTGGTCCGCAGGCCCCTCCGTaGCGGGCACCCACCTCCAGCTCTGGCTGTGTCGAG | + |
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Preference number: 6 (lower is better) Translates to: VQGRAIGPQAPP*RAPTSSSGCVE Trigger: CTCGACACAGCCAGAGCTGGAGGTGGGTGCCCGGCACGGAGGGGCCTGCGGACCAATGGCTCTGCCCTGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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| CDS GCA 72 bp | CCCCTGGCAGGGCCAGCAGCATCCCGAGCCCTAAGGTaGAGGGCAGAGCCATTGGTCCGCAGGCCCCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: PLAGPAASRALR*RAEPLVRRPLR Trigger: ACGGAGGGGCCTGCGGACCAATGGCTCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326294.4 |
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