RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRA (Homo sapiens)

Ensembl gene IDs: ENSG00000132670

Ensembl transcript IDs: ENST00000216877.10, ENST00000318266.9, ENST00000356147.3, ENST00000380393.7, ENST00000399903.6, ENST00000399903.7, ENST00000430705.5, ENST00000431048.5, ENST00000455631.5

Found 429 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCCTCTCTCAGATAACTCAGAGAGAACAGCAACAGGAGGGCCATaGACAGCCGAGGAGAGCCCCAGCCTGTATGGCTGCCCCACCCCC +
Preference number: 1 (lower is better)
Translates to: WPLSDNSERTATGGP*TAEESPSLYGCPTP
Trigger: GGGGGTGGGGCAGCCATACAGGCTGGGGCTCTCCTCGGCTGTTCATGGCCCTCCTGTTGCTGTTCTCTCTGAGTTATCTGAGAGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
3UTR CCA 90 bp CCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACTaGCCTCAGCCCAAAGCTGAGCCAGCTCTAGTCTCCCCTGTGCCC +
Preference number: 1 (lower is better)
Translates to: PDSFVAKHHRLERSD*PQPKAEPALVSPVP
Trigger: GGGCACAGGGGAGACTAGAGCTGGCTCAGCTTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
3UTR-3UTR CCA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCGTGGACAGGAGGAGCTaGGGGACTGTGGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFVDRRS*GTVASL
Trigger: GAGAGAGGCCACAGTCCCCCAGCTCCTCCTGTCCAC...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216877.10
3UTR-3UTR CCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCGGAGCTGGGGGACTGTaGCCTCTCTCAGATAACTCA +
Preference number: 2 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIGAGGL*PLSDNS
Trigger: TGAGTTATCTGAGAGAGGCCACAGTCCCCCAGCTCC...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216877.10
3UTR-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGATATTTACAGTGCATaGTGGTACGGGGACAACCAC +
Preference number: 2 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPDIYSA*WYGDNH
Trigger: GTGGTTGTCCCCGTACCACCATGCACTGTAAATATC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGATATTTACAGTGCATaGTGGTACGGGGACAACCAC +
Preference number: 2 (lower is better)
Translates to: RDTALVLLLPMISVVGMGDIYSA*WYGDNH
Trigger: GTGGTTGTCCCCGTACCACCATGCACTGTAAATATC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR TCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGCCCAATTTCTCGGCTaGGGATTTCACGATATCAAT +
Preference number: 2 (lower is better)
Translates to: RDTALVLLLPMISVVGMGAQFLG*GFHDIN
Trigger: ATTGATATCGTGAAATCCTCAGCCGAGAAATTGGGC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR TCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGGCCCAATTTCTCGGCTaGGGATTTCACGATATCAAT +
Preference number: 2 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSAQFLG*GFHDIN
Trigger: ATTGATATCGTGAAATCCTCAGCCGAGAAATTGGGC...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR TCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGCCCAATTTCTCGGCTaGGGATTTCACGATATCAAT +
Preference number: 2 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPAQFLG*GFHDIN
Trigger: ATTGATATCGTGAAATCCTCAGCCGAGAAATTGGGC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCGATATTTACAGTGCATaGTGGTACGGGGACAACCAC +
Preference number: 2 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSDIYSA*WYGDNH
Trigger: GTGGTTGTCCCCGTACCACCATGCACTGTAAATATC...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR TCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGCCCAATTTCTCGGCTaGGGATTTCACGATATCAAT +
Preference number: 2 (lower is better)
Translates to: HGGTGTTTFLESSENFVLAQFLG*GFHDIN
Trigger: ATTGATATCGTGAAATCCTCAGCCGAGAAATTGGGC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTGGTGCCGAGCTACCTaGAATGGATTTTGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLWCRAT*NGFCVY
Trigger: ATAAACACAAAATCCATTCCAGGTAGCTCGGCACCA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATGGTGCCGAGCTACCTaGAATGGATTTTGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPWCRAT*NGFCVY
Trigger: ATAAACACAAAATCCATTCCAGGTAGCTCGGCACCA...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCTGGTGCCGAGCTACCTaGAATGGATTTTGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSWCRAT*NGFCVY
Trigger: ATAAACACAAAATCCATTCCAGGTAGCTCGGCACCA...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR TCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGCCCAATTTCTCGGCTaGGGATTTCACGATATCAAT +
Preference number: 2 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLAQFLG*GFHDIN
Trigger: ATTGATATCGTGAAATCCTCAGCCGAGAAATTGGGC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCATTTACAGTGCATGGTaGTACGGGGACAACCACTTT +
Preference number: 2 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLIYSAW*YGDNHF
Trigger: AAAGTGGTTGTCCCCGTACCACCATGCACTGTAAAT...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGATTTACAGTGCATGGTaGTACGGGGACAACCACTTT +
Preference number: 2 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQIYSAW*YGDNHF
Trigger: AAAGTGGTTGTCCCCGTACCACCATGCACTGTAAAT...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
3UTR TCA 72 bp AGTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTaGGGACCTGGCCACCTTCCTAGGGAGGGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: SLPCAPVLKETQ*GPGHLPREGGW
Trigger: CCAGCCTCCCTCCCTAGGAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
3UTR TCA 72 bp CAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAAGCTaGGCCAGCTCTAGTCTCCCCTGTGCCCCTGTCCTT +
Preference number: 3 (lower is better)
Translates to: QTGEVRLASAQS*ASSSLPCAPVL
Trigger: AAGGACAGGGGCACAGGGGAGACTAGAGCTGGCTCAGCTTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
3UTR CCA 72 bp GGAATGAAAGGAGGGTCCTGGAGATCACCTAAGAACTaGAAGGGCTGTGTTTGGTGGACAGGAGGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: GMKGGSWRSPKN*KGCVWWTGGAG
Trigger: CCCAGCTCCTCCTGTCCACCAAACACAGCCCTTCCAGTTCTTAGGTGATCTCCAGGACCCTCCTTTCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
3UTR-3UTR CAA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTACCTGGAATGGATTTaGTGTTTATCTTCTTTAGGG +
Preference number: 3 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLYLEWI*CLSSLG
Trigger: CCCTAAAGAAGATAAACACAAAATCCATTCCAGGTA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CAA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTACCTGGAATGGATTTaGTGTTTATCTTCTTTAGGG +
Preference number: 3 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSYLEWI*CLSSLG
Trigger: CCCTAAAGAAGATAAACACAAAATCCATTCCAGGTA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTACCTGGAATGGATTTaGTGTTTATCTTCTTTAGGG +
Preference number: 3 (lower is better)
Translates to: RDTALVLLLPMISVVGMGYLEWI*CLSSLG
Trigger: CCCTAAAGAAGATAAACACAAAATCCATTCCAGGTA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
3UTR-3UTR CAA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCTACCTGGAATGGATTTaGTGTTTATCTTCTTTAGGG +
Preference number: 3 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSYLEWI*CLSSLG
Trigger: CCCTAAAGAAGATAAACACAAAATCCATTCCAGGTA...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000380393.7
ENST00000399903.6
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGCCCCGGCGCTGCAGTaGACGGTGATGGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQAPALQ*TVMGWF
Trigger: GAACCACCCCATCACCGTGCACTGCAGCGCCGGGGC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGGTCCCCGTCCTTCCTaGCCCGGCGCTGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPGPRPS*PGAAVH
Trigger: GTGCACTGCAGCGCCGGGGCAGGAAGGACGGGGACC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGTTGGGCGGGACCGCTaGGGACGAGGACAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPVGRDR*GRGQRL
Trigger: GAGCCGCTGTCCTCGTCCCCAGCGGTCCCGCCCAAC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216877.10
ENST00000318266.9
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCCACAGAGTCGGGCGTTaGGCGGGACCGCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCHRVGR*AGPLGT
Trigger: CGTCCCCAGCGGTCCCGCCCAACGCCCGACTCTGTG...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216877.10
ENST00000318266.9
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGCCCTACACCTGCACTaGAGTGGACCACGATGGCCC +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQALHLH*SGPRWP
Trigger: GGGCCATCGTGGTCCACTGCAGTGCAGGTGTAGGGC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGCCCCGGCGCTGCAGTaGACGGTGATGGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCAPALQ*TVMGWF
Trigger: GAACCACCCCATCACCGTGCACTGCAGCGCCGGGGC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGGTCCCCGTCCTTCCTaGCCCGGCGCTGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLGPRPS*PGAAVH
Trigger: GTGCACTGCAGCGCCGGGGCAGGAAGGACGGGGACC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGCGGCCTCGCCTCCATaGCGAGGGGAAGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLAASPP*RGEAAE
Trigger: CTCAGCCGCTTCCCCTCGCCATGGAGGCGAGGCCGC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCGTAGCCGCAGGCTCTTaGCAGTCTGGAAGACATCCA +
Preference number: 4 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFVAAGS*QSGRHP
Trigger: TGGATGTCTTCCAGACTGTCAAGAGCCTGCGGCTAC...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGAGTGGTTGCTGCGGTaGTGGAATTCCCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQEWLLR*WNSPPR
Trigger: CCTGGGAGGGGAATTCCAGCACCGCAGCAACCACTC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCCCATGGAAGTGGAACTaGCGGATCTGCCGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFPWKWN*RICRLL
Trigger: TAAGAGCCGGCAGATCCGGCAGTTCCACTTCCATGG...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp GCAAAGCACCACAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAAGCTGAGCCAGTCCACGGGCAGGGGTaGGTATTTCCTGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AKHHRLERSDWPQPKAEPVHGQG*VFPVGA
Trigger: AGCACCAACAGGAAATACCCACCCCTGCCCGTGGAC...TGGCTCAGCTTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAATGGCCCCTGCATACTaGGGGTTACAGGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQMAPAY*GLQAFT
Trigger: GGTGAAGGCCTGTAACCCTCAGTATGCAGGGGCCAT...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTCTCCCTGGTGTTGGTaGCCAGGAGGTCTCGGACGG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSSPWCW*PGGLGR
Trigger: CCGTCCGAGACCTCCTGGTCACCAACACCAGGGAGA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTCTCCCTGGTGTTGGTaGCCAGGAGGTCTCGGACGG +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGSPWCW*PGGLGR
Trigger: CCGTCCGAGACCTCCTGGTCACCAACACCAGGGAGA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCACGCTGCAGTGCACGGTaGTGGGGTGGTTCCCTGACT +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPRCSAR*WGGSLT
Trigger: AGTCAGGGAACCACCCCATCACCGTGCACTGCAGCG...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCCGCTGCAGTGCACGGTaGTGGGGTGGTTCCCTGACT +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCRCSAR*WGGSLT
Trigger: AGTCAGGGAACCACCCCATCACCGTGCACTGCAGCG...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCGCTGCAGTGCACGGTaGTGGGGTGGTTCCCTGACT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSRCSAR*WGGSLT
Trigger: AGTCAGGGAACCACCCCATCACCGTGCACTGCAGCG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGCTCCACATCCTCAGTaGGGCCGTTGGATAAGCGGA +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQAPHPQ*GRWISG
Trigger: TCCGCTTATCCAACGGCCGCACTGAGGATGTGGAGC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGCCCTACACCTGCACTaGAGTGGACCACGATGGCCC +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGALHLH*SGPRWP
Trigger: GGGCCATCGTGGTCCACTGCAGTGCAGGTGTAGGGC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCCTGACTGCTGCTGCTaGTTCTGCACGGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSPDCCC*FCTAAM
Trigger: CATCGCCGCCGTGCAGAAGCAGCAGCAGCAGTCAGG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCCCTGACTGCTGCTGCTaGTTCTGCACGGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCPDCCC*FCTAAM
Trigger: CATCGCCGCCGTGCAGAAGCAGCAGCAGCAGTCAGG...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCACGCTCCAGGACGGTaGTCAGGGCACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSHAPGR*SGHRRS
Trigger: GGACCTTCTGTGCCCTGAGCACCGTCCTGGAGCGTG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGCACGCTCCAGGACGGTaGTCAGGGCACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGHAPGR*SGHRRS
Trigger: GGACCTTCTGTGCCCTGAGCACCGTCCTGGAGCGTG...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGAGTTGGGCGGGACCGCTaGGGACGAGGACAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: VTQSRQFCSKAPQTGEVRVGRDR*GRGQRL
Trigger: GAGCCGCTGTCCTCGTCCCCAGCGGTCCCGCCCAAC...TCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATGGTTGCTGCGGTGCTaGAATTCCCCTCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQWLLRC*NSPPRV
Trigger: AACCCTGGGAGGGGAATTCCAGCACCGCAGCAACCA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGATGGGGTGGTTCCCTaGCTGCTGCTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCDGVVP*LLLLLL
Trigger: CAGAAGCAGCAGCAGCAGTCAGGGAACCACCCCATC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGGATGGGGTGGTTCCCTaGCTGCTGCTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSDGVVP*LLLLLL
Trigger: CAGAAGCAGCAGCAGCAGTCAGGGAACCACCCCATC...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCGCCTCAGCCCAAAGCTaGGCCAGCTCTAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIASAQS*ASSSLP
Trigger: GGGGAGACTAGAGCTGGCTCAGCTTTGGGCTGAGGC...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGAGTGGTTGCTGCGGTaGTGGAATTCCCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGEWLLR*WNSPPR
Trigger: CCTGGGAGGGGAATTCCAGCACCGCAGCAACCACTC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGAGTGGTTGCTGCGGTaGTGGAATTCCCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCEWLLR*WNSPPR
Trigger: CCTGGGAGGGGAATTCCAGCACCGCAGCAACCACTC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGCCCTACACCTGCACTaGAGTGGACCACGATGGCCC +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLALHLH*SGPRWP
Trigger: GGGCCATCGTGGTCCACTGCAGTGCAGGTGTAGGGC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCATCTGGCAGCGCTGTaGCCGGATCCGGCTCACAAA +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSHLAAL*PDPAHK
Trigger: TTTGTGAGCCGGATCCGGGCACAGCGCTGCCAGATG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCATCTGGCAGCGCTGTaGCCGGATCCGGCTCACAAA +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLHLAAL*PDPAHK
Trigger: TTTGTGAGCCGGATCCGGGCACAGCGCTGCCAGATG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATGGAACTGCCGGATCTaGCGGCTCTTATTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQWNCRI*RLLFSL
Trigger: CAGGGAGAATAAGAGCCGGCAGATCCGGCAGTTCCA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCTGACTGCTGCTGCTaGTTCTGCACGGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSPDCCC*FCTAAM
Trigger: CATCGCCGCCGTGCAGAAGCAGCAGCAGCAGTCAGG...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATGGTTCCCTGACTGCTaGTGCTGCTTCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPWFPDC*CCFCTA
Trigger: CGCCGTGCAGAAGCAGCAGCAGCAGTCAGGGAACCA...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGGTCCCCGTCCTTCCTaGCCCGGCGCTGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLGPRPS*PGAAVH
Trigger: GTGCACTGCAGCGCCGGGGCAGGAAGGACGGGGACC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCGGAAAGTTTCTGGAGTaGTTGCTGCGGTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFGKFLE*LLRCWN
Trigger: ATTCCAGCACCGCAGCAACCACTCCAGAAACTTTCC...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCACACCTGCACTGCAGTaGACCACGATGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCTPALQ*TTMAPA
Trigger: TGCAGGGGCCATCGTGGTCCACTGCAGTGCAGGTGT...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTCGGTTTGCACCATCTaGCAGCGCTGTGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCSVCTI*QRCARI
Trigger: GATCCGGGCACAGCGCTGCCAGATGGTGCAAACCGA...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCGGCCAGCCATGGAAGTaGAACTGCCGGATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIGQPWK*NCRICR
Trigger: CCGGCAGATCCGGCAGTTCCACTTCCATGGCTGGCC...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGGCCAGCCATGGAAGTaGAACTGCCGGATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLGQPWK*NCRICR
Trigger: CCGGCAGATCCGGCAGTTCCACTTCCATGGCTGGCC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTGCCCTTTCCGTCACTaGGGATGCCCACTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGCPFRH*GCPLQA
Trigger: GGCCTGAAGTGGGCATCCCCAGTGACGGAAAGGGCA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTGCCCTTTCCGTCACTaGGGATGCCCACTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLCPFRH*GCPLQA
Trigger: GGCCTGAAGTGGGCATCCCCAGTGACGGAAAGGGCA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTGCCCTTTCCGTCACTaGGGATGCCCACTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCCPFRH*GCPLQA
Trigger: GGCCTGAAGTGGGCATCCCCAGTGACGGAAAGGGCA...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGGAGCTGGGGGACTGTaGCCTCTCTCAGATAACTCA +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQGAGGL*PLSDNS
Trigger: TGAGTTATCTGAGAGAGGCCACAGTCCCCCAGCTCC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACTGTTCTGGCATCCGTaGACTGGTTATCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQLFWHP*TGYLEA
Trigger: GGCTTCCAGATAACCAGTTCACGGATGCCAGAACAG...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGATGGGGTGGTTCCCTaGCTGCTGCTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLDGVVP*LLLLLL
Trigger: CAGAAGCAGCAGCAGCAGTCAGGGAACCACCCCATC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAAGTTTCTGGAGTGGTTaGTGCGGTGCTGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQSFWSG*CGAGIP
Trigger: GGGAATTCCAGCACCGCAGCAACCACTCCAGAAACT...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGCTCCACATCCTCAGTaGGGCCGTTGGATAAGCGGA +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGAPHPQ*GRWISG
Trigger: TCCGCTTATCCAACGGCCGCACTGAGGATGTGGAGC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGACCACGATGGCCCCTaGATACTGAGGGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGDHDGP*ILRVTG
Trigger: GCCTGTAACCCTCAGTATGCAGGGGCCATCGTGGTC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTTCCGTCACTGGGGATaGCCACTTCAGGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLFRHWG*PLQASH
Trigger: ATGGCTGGCCTGAAGTGGGCATCCCCAGTGACGGAA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTTCCGTCACTGGGGATaGCCACTTCAGGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSFRHWG*PLQASH
Trigger: ATGGCTGGCCTGAAGTGGGCATCCCCAGTGACGGAA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCTGCTTGCTGTTCTTGTaGTCCCATTGTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFCLLFL*SHCQSL
Trigger: CAGACTCTGACAATGGGACCACAAGAACAGCAAGCA...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTGGTTGCTGCGGTGCTaGAATTCCCCTCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGWLLRC*NSPPRV
Trigger: AACCCTGGGAGGGGAATTCCAGCACCGCAGCAACCA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCTCAGTGCGGCCGTTaGATAAGCGGAAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQPQCGR*ISGKNW
Trigger: CCAATTCTTTCCGCTTATCCAACGGCCGCACTGAGG...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGGTCCACGGGCAGGGGTaGGTATTTCCTGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSVHGQG*VFPVGA
Trigger: AGCACCAACAGGAAATACCCACCCCTGCCCGTGGAC...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGCCTCACAGGTGGCCTaGATAGGACATGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPASQVA*IGHAGR
Trigger: TCTCCCTGCATGTCCTATCCAGGCCACCTGTGAGGC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAATGTCGCCCACCTGCTaGATGCAGAACTTCCGTACT +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQMSPTC*MQNFRT
Trigger: AGTACGGAAGTTCTGCATCCAGCAGGTGGGCGACAT...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTGCAGTGGACCACGATaGCCCCTGCATACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSCSGPR*PLHTEG
Trigger: ACCCTCAGTATGCAGGGGCCATCGTGGTCCACTGCA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTGCAGTGGACCACGATaGCCCCTGCATACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLCSGPR*PLHTEG
Trigger: ACCCTCAGTATGCAGGGGCCATCGTGGTCCACTGCA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCACACCTGCACTGCAGTaGACCACGATGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSTPALQ*TTMAPA
Trigger: TGCAGGGGCCATCGTGGTCCACTGCAGTGCAGGTGT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCGGTTCTTCTTCATGTTaGCTGGAAGGTTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFGSSSC*LEGFQS
Trigger: GGACTGGAAACCTTCCAGCCAACATGAAGAAGAACC...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACACCAGTCCATCAGATaGCCAGTACTGGGCACACTT +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQHQSIR*PVLGTL
Trigger: AAGTGTGCCCAGTACTGGCCATCTGATGGACTGGTG...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCTGCACGGTGATGGGGTaGTTCCCTGACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSCTVMG*FPDCCC
Trigger: GCAGCAGCAGTCAGGGAACCACCCCATCACCGTGCA...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCCTGGAGAGGTCAGACTaGCCTCAGCCCAAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCLERSD*PQPKAE
Trigger: CTCAGCTTTGGGCTGAGGCCAGTCTGACCTCTCCAG...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCTGGTAAAGTGGAACTaGGTGATGAGGCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLLVKWN*VMRRCG
Trigger: GCCACAGCGCCTCATCACTCAGTTCCACTTTACCAG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCACTGGTAAAGTGGAACTaGGTGATGAGGCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPLVKWN*VMRRCG
Trigger: GCCACAGCGCCTCATCACTCAGTTCCACTTTACCAG...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCATGGCCCCTGCATACTaGGGGTTACAGGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSMAPAY*GLQAFT
Trigger: GGTGAAGGCCTGTAACCCTCAGTATGCAGGGGCCAT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp GTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGATCTCCCTGGTGTTGGTaGCCAGGAGGTCTCGGACGG +
Preference number: 4 (lower is better)
Translates to: VTQSRQFCSKAPQTGEVRSPWCW*PGGLGR
Trigger: CCGTCCGAGACCTCCTGGTCACCAACACCAGGGAGA...TCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGTAGCCGCAGGCTCTTaGCAGTCTGGAAGACATCCA +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPVAAGS*QSGRHP
Trigger: TGGATGTCTTCCAGACTGTCAAGAGCCTGCGGCTAC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCGCCCAATTTCTCGGCTaGGGATTTCACGATATCAAT +
Preference number: 4 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFAQFLG*GFHDIN
Trigger: ATTGATATCGTGAAATCCTCAGCCGAGAAATTGGGC...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATCCTATTACTCCCCATaGTATCAGTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQSYYSP*YQWWGW
Trigger: CCATCCCCACCACTGATATCATGGGGAGTAATAGGA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGCAACAGGAGGGCCATaGACAGCCGAGGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLATGGP*TAEESP
Trigger: GGGGCTCTCCTCGGCTGTTCATGGCCCTCCTGTTGC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGTAGGAACAGCACTCTaGAGAGTTGCCAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQVGTAL*RVASER
Trigger: TCTCTCACTGGCAACTCTTCAGAGTGCTGTTCCTAC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTTCTGGAGTGGTTGCTaGGGTGCTGGAATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSFWSGC*GAGIPL
Trigger: GAGGGGAATTCCAGCACCGCAGCAACCACTCCAGAA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCGCTCCACATCCTCAGTaGGGCCGTTGGATAAGCGGA +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSAPHPQ*GRWISG
Trigger: TCCGCTTATCCAACGGCCGCACTGAGGATGTGGAGC...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCCGCCCACCTGCTGGATaGAGAACTTCCGTACTGTGT +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCRPPAG*RTSVLC
Trigger: ACACAGTACGGAAGTTCTGCATCCAGCAGGTGGGCG...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTGTCATGTCGCCCACCTaGTGGATGCAGAACTTCCGT +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLVMSPT*WMQNFR
Trigger: ACGGAAGTTCTGCATCCAGCAGGTGGGCGACATGAC...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCGACCACGATGGCCCCTaGATACTGAGGGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSDHDGP*ILRVTG
Trigger: GCCTGTAACCCTCAGTATGCAGGGGCCATCGTGGTC...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTGGAACTGCCGGATCTaGCGGCTCTTATTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSWNCRI*RLLFSL
Trigger: CAGGGAGAATAAGAGCCGGCAGATCCGGCAGTTCCA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCCATGGAAGTGGAACTaGCGGATCTGCCGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSPWKWN*RICRLL
Trigger: TAAGAGCCGGCAGATCCGGCAGTTCCACTTCCATGG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTTCCGTCACTGGGGATaGCCACTTCAGGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLFRHWG*PLQASH
Trigger: ATGGCTGGCCTGAAGTGGGCATCCCCAGTGACGGAA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACACGCTCCAGGACGGTaGTCAGGGCACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VTQSRQFCSKAPQTGEVRHAPGR*SGHRRS
Trigger: GGACCTTCTGTGCCCTGAGCACCGTCCTGGAGCGTG...TCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAAGAAGTGGCACACTCTaGGGCTCCACATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPRSGTL*GSTSSV
Trigger: CACTGAGGATGTGGAGCCCCAGAGTGTGCCACTTCT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGCCTCACAGGTGGCCTaGATAGGACATGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLASQVA*IGHAGR
Trigger: TCTCCCTGCATGTCCTATCCAGGCCACCTGTGAGGC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTGGTCTGGCCAGTACTaGGCGCACTTGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLWSGQY*AHLHSF
Trigger: AAAGGAGTGCAAGTGCGCCCAGTACTGGCCAGACCA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTGGTCTGGCCAGTACTaGGCGCACTTGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGWSGQY*AHLHSF
Trigger: AAAGGAGTGCAAGTGCGCCCAGTACTGGCCAGACCA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGCTGTGGCTTTCTGTTaGTCATGTCGCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGAVAFC*SCRPPA
Trigger: AGCAGGTGGGCGACATGACCAACAGAAAGCCACAGC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTGGGCACACTTCTCCTaGCCTCTCTCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLWAHFS*PLSSSS
Trigger: AGAACTGGAGGAGAGAGGCCAGGAGAAGTGTGCCCA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTGGGCACACTTCTCCTaGCCTCTCTCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGWAHFS*PLSSSS
Trigger: AGAACTGGAGGAGAGAGGCCAGGAGAAGTGTGCCCA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCAGATGGCCAGTACTaGGCACACTTCTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLSDGQY*AHFSWP
Trigger: AGGCCAGGAGAAGTGTGCCCAGTACTGGCCATCTGA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTCAGATGGCCAGTACTaGGCACACTTCTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSSDGQY*AHFSWP
Trigger: AGGCCAGGAGAAGTGTGCCCAGTACTGGCCATCTGA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATACTGTTCCAGTGTCTaGACCATGTGTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQYCSSV*TMCGLC
Trigger: ACAGAGGCCACACATGGTCCAGACACTGGAACAGTA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTCCTAGGGAGGGAGGCTaGCCAGGACCACTAAACCAA +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLPREGG*PGPLNQ
Trigger: TTGGTTTAGTGGTCCTGGCCAGCCTCCCTCCCTAGG...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCAAAGCACCACAGACTaGAGAGGTCAGACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSQSTTD*RGQTGL
Trigger: GAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGATCACCAGGGGAGGGTaGAGTAGGAACAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSITRGG*SRNSTL
Trigger: CAGAGTGCTGTTCCTACTCCACCCTCCCCTGGTGAT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCTGTTCTGGCATCCGTaGACTGGTTATCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLLFWHP*TGYLEA
Trigger: GGCTTCCAGATAACCAGTTCACGGATGCCAGAACAG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCTTGTTGCCGCTTACTTaGAGTTGGCATAATCTGAGA +
Preference number: 4 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFLLPLT*SWHNLR
Trigger: TCTCAGATTATGCCAACTTCAAGTAAGCGGCAACAA...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTTCTGGAGTGGTTGCTaGGGTGCTGGAATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLFWSGC*GAGIPL
Trigger: GAGGGGAATTCCAGCACCGCAGCAACCACTCCAGAA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAAGTTTCTGGAGTGGTTaGTGCGGTGCTGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPSFWSG*CGAGIP
Trigger: GGGAATTCCAGCACCGCAGCAACCACTCCAGAAACT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTGGCCTGGATAGGACATaGAGGGAGAGCGTTGAATTC +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLGLDRT*RESVEF
Trigger: GAATTCAACGCTCTCCCTGCATGTCCTATCCAGGCC...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGTCATGTCGCCCACCTaGTGGATGCAGAACTTCCGT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLVMSPT*WMQNFR
Trigger: ACGGAAGTTCTGCATCCAGCAGGTGGGCGACATGAC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCGTCATGTCGCCCACCTaGTGGATGCAGAACTTCCGT +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSVMSPT*WMQNFR
Trigger: ACGGAAGTTCTGCATCCAGCAGGTGGGCGACATGAC...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACATCTGGCAGCGCTGTaGCCGGATCCGGCTCACAAA +
Preference number: 4 (lower is better)
Translates to: VTQSRQFCSKAPQTGEVRHLAAL*PDPAHK
Trigger: TTTGTGAGCCGGATCCGGGCACAGCGCTGCCAGATG...TCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp AGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAATGGAACTGCCGGATCTaGCGGCTCTTATTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SFVAKHHRLERSDWPQPKWNCRI*RLLFSL
Trigger: CAGGGAGAATAAGAGCCGGCAGATCCGGCAGTTCCA...TTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATGGAAGTGGAACTaGCGGATCTGCCGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSPWKWN*RICRLL
Trigger: TAAGAGCCGGCAGATCCGGCAGTTCCACTTCCATGG...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGGCCCCGGCGCTGCAGTaGACGGTGATGGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQAPALQ*TVMGWF
Trigger: GAACCACCCCATCACCGTGCACTGCAGCGCCGGGGC...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGAGGGATATTTACAGTaGATGGTGGTACGGGGACAA +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQEGYLQ*MVVRGQ
Trigger: TTGTCCCCGTACCACCATGCACTGTAAATATCCCTC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GCAAAGCACCACAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAAGCTGAGCCATCCCAGAGTTATATTTaGGCTGAATGTTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: AKHHRLERSDWPQPKAEPSQSYI*AECWCH
Trigger: GTGGCACCAACATTCAGCCCAAATATAACTCTGGGA...TGGCTCAGCTTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATGCTTGCTGTTCTTGTaGTCCCATTGTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQCLLFL*SHCQSL
Trigger: CAGACTCTGACAATGGGACCACAAGAACAGCAAGCA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCAGGAGGGAAAGTTTCTaGAGTGGTTGCTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCRRESF*SGCCGA
Trigger: AGCACCGCAGCAACCACTCCAGAAACTTTCCCTCCT...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGCCTCAGTGCGGCCGTTaGATAAGCGGAAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGPQCGR*ISGKNW
Trigger: CCAATTCTTTCCGCTTATCCAACGGCCGCACTGAGG...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTGTGGGTATTTCCTGTTaGTGCTTGGGGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLVGISC*CLGIWP
Trigger: TGGCCAGATCCCCAAGCACCAACAGGAAATACCCAC...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCACCTTGTTTTCCTCCTTaGAAGCAGCCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPPCFPP*KQPHRW
Trigger: CCACCTGTGAGGCTGCTTCCAAGGAGGAAAACAAGG...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCCTTGTTTTCCTCCTTaGAAGCAGCCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSPCFPP*KQPHRW
Trigger: CCACCTGTGAGGCTGCTTCCAAGGAGGAAAACAAGG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCGCTGTGGCTTTCTGTTaGTCATGTCGCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIAVAFC*SCRPPA
Trigger: AGCAGGTGGGCGACATGACCAACAGAAAGCCACAGC...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCGCTGTGGCTTTCTGTTaGTCATGTCGCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSAVAFC*SCRPPA
Trigger: AGCAGGTGGGCGACATGACCAACAGAAAGCCACAGC...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAAGGCACCCCAAAGTCTaGCCAGCTGGTAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPRHPKV*PAGKVE
Trigger: TTCCACTTTACCAGCTGGCCAGACTTTGGGGTGCCT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGAGGCACCCCAAAGTCTaGCCAGCTGGTAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSRHPKV*PAGKVE
Trigger: TTCCACTTTACCAGCTGGCCAGACTTTGGGGTGCCT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGAACACCTGCACTGCAGTaGACCACGATGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VTQSRQFCSKAPQTGEVRTPALQ*TTMAPA
Trigger: TGCAGGGGCCATCGTGGTCCACTGCAGTGCAGGTGT...TCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGTCGGTTTGCACCATCTaGCAGCGCTGTGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGESVCTI*QRCARI
Trigger: GATCCGGGCACAGCGCTGCCAGATGGTGCAAACCGA...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTAAGTCCTCAATTGTGTaGAGAAGAGGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLKSSIV*RRGPWL
Trigger: CAGCCAGGGCCCTCTTCTCCACACAATTGAGGACTT...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGAAGTCCTCAATTGTGTaGAGAAGAGGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSKSSIV*RRGPWL
Trigger: CAGCCAGGGCCCTCTTCTCCACACAATTGAGGACTT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTGGGCACACTTCTCCTaGCCTCTCTCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLWAHFS*PLSSSS
Trigger: AGAACTGGAGGAGAGAGGCCAGGAGAAGTGTGCCCA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTCAGATGGCCAGTACTaGGCACACTTCTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLSDGQY*AHFSWP
Trigger: AGGCCAGGAGAAGTGTGCCCAGTACTGGCCATCTGA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGCACCAGTCCATCAGATaGCCAGTACTGGGCACACTT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGHQSIR*PVLGTL
Trigger: AAGTGTGCCCAGTACTGGCCATCTGATGGACTGGTG...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGTGCACGGTGATGGGGTaGTTCCCTGACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGECTVMG*FPDCCC
Trigger: GCAGCAGCAGTCAGGGAACCACCCCATCACCGTGCA...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAAGATCACCTAAGAACTaGAAGGGCTGTGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQRSPKN*KGCVWW
Trigger: CCACCAAACACAGCCCTTCCAGTTCTTAGGTGATCT...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCATCACCAGGGGAGGGTaGAGTAGGAACAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSITRGG*SRNSTL
Trigger: CAGAGTGCTGTTCCTACTCCACCCTCCCCTGGTGAT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTCCTATTACTCCCCATaGTATCAGTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGSYYSP*YQWWGW
Trigger: CCATCCCCACCACTGATATCATGGGGAGTAATAGGA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTGTAGGAACAGCACTCTaGAGAGTTGCCAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLVGTAL*RVASER
Trigger: TCTCTCACTGGCAACTCTTCAGAGTGCTGTTCCTAC...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGGGTATTTCCTGTTGGTaGTTGGGGATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSGISCW*LGIWPE
Trigger: TTCTGGCCAGATCCCCAAGCACCAACAGGAAATACC...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGGTATTTCCTGTTGGTaGTTGGGGATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGGISCW*LGIWPE
Trigger: TTCTGGCCAGATCCCCAAGCACCAACAGGAAATACC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGGCCTGGATAGGACATaGAGGGAGAGCGTTGAATTC +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLGLDRT*RESVEF
Trigger: GAATTCAACGCTCTCCCTGCATGTCCTATCCAGGCC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCAGTACTGGGCGCACTTaGACTCCTTTCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCSTGRT*TPFSPS
Trigger: TGAAGGAGAGAAAGGAGTGCAAGTGCGCCCAGTACT...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATACTGCATATCGGTTTaGACCATCTGGCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPYCISV*TIWQRC
Trigger: ACAGCGCTGCCAGATGGTGCAAACCGATATGCAGTA...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCTGGCATCCGTGAACTaGTTATCTGGAAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSLASVN*LSGSHV
Trigger: AACGTGGCTTCCAGATAACCAGTTCACGGATGCCAG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTGGAAAGTTTCTGGAGTaGTTGCTGCGGTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLGKFLE*LLRCWN
Trigger: ATTCCAGCACCGCAGCAACCACTCCAGAAACTTTCC...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTAGGAGGGAAAGTTTCTaGAGTGGTTGCTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLRRESF*SGCCGA
Trigger: AGCACCGCAGCAACCACTCCAGAAACTTTCCCTCCT...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCGTGGGTATTTCCTGTTaGTGCTTGGGGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIVGISC*CLGIWP
Trigger: TGGCCAGATCCCCAAGCACCAACAGGAAATACCCAC...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGAGTGATGAGGCGCTGTaGCTTTCTGTTGGTCATGTC +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSSDEAL*LSVGHV
Trigger: GACATGACCAACAGAAAGCCACAGCGCCTCATCACT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTCGGTTTGCACCATCTaGCAGCGCTGTGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLSVCTI*QRCARI
Trigger: GATCCGGGCACAGCGCTGCCAGATGGTGCAAACCGA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCACCAGTCCATCAGATaGCCAGTACTGGGCACACTT +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSHQSIR*PVLGTL
Trigger: AAGTGTGCCCAGTACTGGCCATCTGATGGACTGGTG...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGTGGAAGGGCTGTGTTTaGTGGACAGGAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEWKGCV*WTGGAG
Trigger: CCCAGCTCCTCCTGTCCACCAAACACAGCCCTTCCA...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACAGAGTCTGAAGAATTaGCAGTGGTTAAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQQSLKN*QWLNRW
Trigger: CCACCTATTTAACCACTGTCAATTCTTCAGACTCTG...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATTGTTGCCGCTTACTTaGAGTTGGCATAATCTGAGA +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQLLPLT*SWHNLR
Trigger: TCTCAGATTATGCCAACTTCAAGTAAGCGGCAACAA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCTCCTATTACTCCCCATaGTATCAGTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSSYYSP*YQWWGW
Trigger: CCATCCCCACCACTGATATCATGGGGAGTAATAGGA...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp GTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACTTAAGGAGACTCAGTaGGGACCTGGCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: VTQSRQFCSKAPQTGEVRLKETQ*GPGHLP
Trigger: AGGAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAG...TCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGGTATTTCCTGTTGGTaGTTGGGGATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLGISCW*LGIWPE
Trigger: TTCTGGCCAGATCCCCAAGCACCAACAGGAAATACC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGAGCTTATTGTCGTCTaGCATTCTCCGGTTAATTTC +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQELIVV*HSPVNF
Trigger: GAAATTAACCGGAGAATGGCAGACGACAATAAGCTC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGACCACGATGGCCCCTaGATACTGAGGGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLDHDGP*ILRVTG
Trigger: GCCTGTAACCCTCAGTATGCAGGGGCCATCGTGGTC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTACCTTCCGTTCTGTATaGATCATGTCCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLTFRSV*IMSSMA
Trigger: TGCCATGCTGGACATGATGCATACAGAACGGAAGGT...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGACCTTCCGTTCTGTATaGATCATGTCCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSTFRSV*IMSSMA
Trigger: TGCCATGCTGGACATGATGCATACAGAACGGAAGGT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAACCTTCCGTTCTGTATaGATCATGTCCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPTFRSV*IMSSMA
Trigger: TGCCATGCTGGACATGATGCATACAGAACGGAAGGT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTACTGCATATCGGTTTaGACCATCTGGCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLYCISV*TIWQRC
Trigger: ACAGCGCTGCCAGATGGTGCAAACCGATATGCAGTA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTATCCAAAATCCCCTCTaGTTTCACACGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLIQNPL*FHTLQD
Trigger: GTCCTGGAGCGTGTGAAAGCAGAGGGGATTTTGGAT...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCATCCAAAATCCCCTCTaGTTTCACACGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSIQNPL*FHTLQD
Trigger: GTCCTGGAGCGTGTGAAAGCAGAGGGGATTTTGGAT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTGCTTGCTGTTCTTGTaGTCCCATTGTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCCLLFL*SHCQSL
Trigger: CAGACTCTGACAATGGGACCACAAGAACAGCAAGCA...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCGTGAACTGGTTATCTaGAAGCCACGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSRELVI*KPRSIW
Trigger: CCAAATGGAACGTGGCTTCCAGATAACCAGTTCACG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTCTGGCATCCGTGAACTaGTTATCTGGAAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLLASVN*LSGSHV
Trigger: AACGTGGCTTCCAGATAACCAGTTCACGGATGCCAG...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGTCCACGGGCAGGGGTaGGTATTTCCTGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLVHGQG*VFPVGA
Trigger: AGCACCAACAGGAAATACCCACCCCTGCCCGTGGAC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGCCTCACAGGTGGCCTaGATAGGACATGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLASQVA*IGHAGR
Trigger: TCTCCCTGCATGTCCTATCCAGGCCACCTGTGAGGC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACACCGTTTCTTCTTTTaGTCCTTGTGCAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQHRFFF*SLCSNE
Trigger: TTCATTGCTGCACAAGGACCAAAAGAAGAAACGGTG...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCAGTGATGAGGCGCTGTaGCTTTCTGTTGGTCATGTC +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSSDEAL*LSVGHV
Trigger: GACATGACCAACAGAAAGCCACAGCGCCTCATCACT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGCAGTGGACCACGATaGCCCCTGCATACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLCSGPR*PLHTEG
Trigger: ACCCTCAGTATGCAGGGGCCATCGTGGTCCACTGCA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGCTTCTTCATGTTGGCTaGAAGGTTTCCAGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGLLHVG*KVSSPH
Trigger: ATGCGGACTGGAAACCTTCCAGCCAACATGAAGAAG...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCTTCTTCATGTTGGCTaGAAGGTTTCCAGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSLLHVG*KVSSPH
Trigger: ATGCGGACTGGAAACCTTCCAGCCAACATGAAGAAG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGGTTCTTCTTCATGTTaGCTGGAAGGTTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGGSSSC*LEGFQS
Trigger: GGACTGGAAACCTTCCAGCCAACATGAAGAAGAACC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGGTGGACAGGAGGAGCTaGGGGACTGTGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQVDRRS*GTVASL
Trigger: GAGAGAGGCCACAGTCCCCCAGCTCCTCCTGTCCAC...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCGAGCAGAACAAGAATaGACCAGGAATCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLRAEQE*TRNPCL
Trigger: TAAGCATGGATTCCTGGTTCATTCTTGTTCTGCTCG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCCGAGCAGAACAAGAATaGACCAGGAATCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCRAEQE*TRNPCL
Trigger: TAAGCATGGATTCCTGGTTCATTCTTGTTCTGCTCG...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGTAGCCGTTGATGAATaGAGCATTGATGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQVAVDE*SIDVIR
Trigger: TCTGATTACATCAATGCTTCATTCATCAACGGCTAC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGTCCTTGTGCAGCAATaGATTTGTTCTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQVLVQQ*ICSFLG
Trigger: ACCAAGAAAAGAACAAATTCATTGCTGCACAAGGAC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCCTGGTAAAGTGGAACTaGGTGATGAGGCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLLVKWN*VMRRCG
Trigger: GCCACAGCGCCTCATCACTCAGTTCCACTTTACCAG...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGAAGGGCTTGGTATATaGAGACATACTGCATATCGG +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCEGLGI*RHTAYR
Trigger: CCGATATGCAGTATGTCTTCATATACCAAGCCCTTC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGTAGCCGCAGGCTCTTaGCAGTCTGGAAGACATCCA +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLVAAGS*QSGRHP
Trigger: TGGATGTCTTCCAGACTGTCAAGAGCCTGCGGCTAC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTTCTGGAGTGGTTGCTaGGGTGCTGGAATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLFWSGC*GAGIPL
Trigger: GAGGGGAATTCCAGCACCGCAGCAACCACTCCAGAA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGAATGGCTCCCAGCTTaGTTGTATTTCTTAAACCTT +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQEWLPA*LYFLNL
Trigger: AAGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCCGCCCACCTGCTGGATaGAGAACTTCCGTACTGTGT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLRPPAG*RTSVLC
Trigger: ACACAGTACGGAAGTTCTGCATCCAGCAGGTGGGCG...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCCTCTAATCCATTGTTaGTGGTCCCTGGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSPLIHC*WSLGFC
Trigger: ACAAAATCCCAGGGACCAGCAACAATGGATTAGAGG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCGAGGGATATTTACAGTaGATGGTGGTACGGGGACAA +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSEGYLQ*MVVRGQ
Trigger: TTGTCCCCGTACCACCATGCACTGTAAATATCCCTC...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCGTGAACTGGTTATCTaGAAGCCACGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSRELVI*KPRSIW
Trigger: CCAAATGGAACGTGGCTTCCAGATAACCAGTTCACG...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCAGAAGTGGCACACTCTaGGGCTCCACATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLRSGTL*GSTSSV
Trigger: CACTGAGGATGTGGAGCCCCAGAGTGTGCCACTTCT...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGATGTAATCAGAATCTaGAACCCCTTCAACCGGTGT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGDVIRI*NPFNRC
Trigger: ACACCGGTTGAAGGGGTTCCAGATTCTGATTACATC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGATGTCGCCCACCTGCTaGATGCAGAACTTCCGTACT +
Preference number: 4 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEMSPTC*MQNFRT
Trigger: AGTACGGAAGTTCTGCATCCAGCAGGTGGGCGACAT...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATGCTCCAGAAGGGCTTaGTATATGAAGACATACTGC +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPCSRRA*YMKTYC
Trigger: GCAGTATGTCTTCATATACCAAGCCCTTCTGGAGCA...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTGCTCCAGAAGGGCTTaGTATATGAAGACATACTGC +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCCSRRA*YMKTYC
Trigger: GCAGTATGTCTTCATATACCAAGCCCTTCTGGAGCA...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTGCTCCAGAAGGGCTTaGTATATGAAGACATACTGC +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSCSRRA*YMKTYC
Trigger: GCAGTATGTCTTCATATACCAAGCCCTTCTGGAGCA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTTCGCCCCGCTTAACTaGAATGATCACTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLFAPLN*NDHSVE
Trigger: TTCAACAGAGTGATCATTCCAGTTAAGCGGGGCGAA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCATTTACAGTGCATGGTaGTACGGGGACAACCACTTT +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCIYSAW*YGDNHF
Trigger: AAAGTGGTTGTCCCCGTACCACCATGCACTGTAAAT...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAATTTACAGTGCATGGTaGTACGGGGACAACCACTTT +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPIYSAW*YGDNHF
Trigger: AAAGTGGTTGTCCCCGTACCACCATGCACTGTAAAT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGATTTACAGTGCATGGTaGTACGGGGACAACCACTTT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGIYSAW*YGDNHF
Trigger: AAAGTGGTTGTCCCCGTACCACCATGCACTGTAAAT...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCGATATTTACAGTGCATaGTGGTACGGGGACAACCAC +
Preference number: 4 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIDIYSA*WYGDNH
Trigger: GTGGTTGTCCCCGTACCACCATGCACTGTAAATATC...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTATGAAAGGAGGGTCCTaGAGATCACCTAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLMKGGS*RSPKNW
Trigger: CCAGTTCTTAGGTGATCTCCAGGACCCTCCTTTCAT...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp AGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAACGAGCAGAACAAGAATaGACCAGGAATCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: SFVAKHHRLERSDWPQPKRAEQE*TRNPCL
Trigger: TAAGCATGGATTCCTGGTTCATTCTTGTTCTGCTCG...TTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGAGTTATATTTGGGCTaGATGTTGGTGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGELYLG*MLVPQK
Trigger: TTTCTGTGGCACCAACATTCAGCCCAAATATAACTC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCAGAGTCTGAAGAATTaGCAGTGGTTAAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLQSLKN*QWLNRW
Trigger: CCACCTATTTAACCACTGTCAATTCTTCAGACTCTG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCCTGTTCTGGCATCCGTaGACTGGTTATCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLLFWHP*TGYLEA
Trigger: GGCTTCCAGATAACCAGTTCACGGATGCCAGAACAG...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGAAGGGCTTGGTATATaGAGACATACTGCATATCGG +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLEGLGI*RHTAYR
Trigger: CCGATATGCAGTATGTCTTCATATACCAAGCCCTTC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATTGTTGCCGCTTACTTaGAGTTGGCATAATCTGAGA +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPLLPLT*SWHNLR
Trigger: TCTCAGATTATGCCAACTTCAAGTAAGCGGCAACAA...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGGCCTGGATAGGACATaGAGGGAGAGCGTTGAATTC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLGLDRT*RESVEF
Trigger: GAATTCAACGCTCTCCCTGCATGTCCTATCCAGGCC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGTACTGCATATCGGTTTaGACCATCTGGCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEYCISV*TIWQRC
Trigger: ACAGCGCTGCCAGATGGTGCAAACCGATATGCAGTA...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCCCTCTAATCCATTGTTaGTGGTCCCTGGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIPLIHC*WSLGFC
Trigger: ACAAAATCCCAGGGACCAGCAACAATGGATTAGAGG...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCTCTAATCCATTGTTaGTGGTCCCTGGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSPLIHC*WSLGFC
Trigger: ACAAAATCCCAGGGACCAGCAACAATGGATTAGAGG...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGCCATCAATAAAGGATaGGTTCACATAGTCTGTATT +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQAINKG*VHIVCI
Trigger: AATACAGACTATGTGAACGCATCCTTTATTGATGGC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGTGGGTATTTCCTGTTaGTGCTTGGGGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLVGISC*CLGIWP
Trigger: TGGCCAGATCCCCAAGCACCAACAGGAAATACCCAC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGATGTAATCAGAATCTaGAACCCCTTCAACCGGTGT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLDVIRI*NPFNRC
Trigger: ACACCGGTTGAAGGGGTTCCAGATTCTGATTACATC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCCACCGTTTCTTCTTTTaGTCCTTGTGCAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCHRFFF*SLCSNE
Trigger: TTCATTGCTGCACAAGGACCAAAAGAAGAAACGGTG...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCACCGTTTCTTCTTTTaGTCCTTGTGCAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLHRFFF*SLCSNE
Trigger: TTCATTGCTGCACAAGGACCAAAAGAAGAAACGGTG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCATGTCGCCCACCTGCTaGATGCAGAACTTCCGTACT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLMSPTC*MQNFRT
Trigger: AGTACGGAAGTTCTGCATCCAGCAGGTGGGCGACAT...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCAAGTCCTCAATTGTGTaGAGAAGAGGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLKSSIV*RRGPWL
Trigger: CAGCCAGGGCCCTCTTCTCCACACAATTGAGGACTT...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGTACTGTTCCAGTGTCTaGACCATGTGTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEYCSSV*TMCGLC
Trigger: ACAGAGGCCACACATGGTCCAGACACTGGAACAGTA...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTGGTGCCGAGCTACCTaGAATGGATTTTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGWCRAT*NGFCVY
Trigger: ATAAACACAAAATCCATTCCAGGTAGCTCGGCACCA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCGAGTTATATTTGGGCTaGATGTTGGTGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIELYLG*MLVPQK
Trigger: TTTCTGTGGCACCAACATTCAGCCCAAATATAACTC...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGTCCTTGTGCAGCAATaGATTTGTTCTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCVLVQQ*ICSFLG
Trigger: ACCAAGAAAAGAACAAATTCATTGCTGCACAAGGAC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGTCCTTGTGCAGCAATaGATTTGTTCTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGVLVQQ*ICSFLG
Trigger: ACCAAGAAAAGAACAAATTCATTGCTGCACAAGGAC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGAAACTGGCAAGCTTCTaGAGAAGTCTAGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGKLASF*RSLASF
Trigger: AAAAGAAGCTAGACTTCTTCAGAAGCTTGCCAGTTT...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGAAACTGGCAAGCTTCTaGAGAAGTCTAGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSKLASF*RSLASF
Trigger: AAAAGAAGCTAGACTTCTTCAGAAGCTTGCCAGTTT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAAATTCCTACAGAAGGTaGAACTGTGGTAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPNSYRR*NCGSIV
Trigger: AACAATGCTACCACAGTTGCACCTTCTGTAGGAATT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTATAGAATTGGTGCTTaGTGTTCTTGTGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGYRIGA*CSCGPI
Trigger: AATGGGACCACAAGAACAGCAAGCACCAATTCTATA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGAATGGCTCCCAGCTTaGTTGTATTTCTTAAACCTT +
Preference number: 4 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCEWLPA*LYFLNL
Trigger: AAGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGAATGGCTCCCAGCTTaGTTGTATTTCTTAAACCTT +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPEWLPA*LYFLNL
Trigger: AAGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCAGTACTGGGCGCACTTaGACTCCTTTCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLSTGRT*TPFSPS
Trigger: TGAAGGAGAGAAAGGAGTGCAAGTGCGCCCAGTACT...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGCGCCCACCTGCTGGATaGAGAACTTCCGTACTGTGT +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQRPPAG*RTSVLC
Trigger: ACACAGTACGGAAGTTCTGCATCCAGCAGGTGGGCG...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCAGTGGTTAAATAGGTaGGTCCCAGAGTTATATTTG +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLQWLNR*VPELYL
Trigger: CAAATATAACTCTGGGACCCACCTATTTAACCACTG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCAGTGGTTAAATAGGTaGGTCCCAGAGTTATATTTG +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSQWLNR*VPELYL
Trigger: CAAATATAACTCTGGGACCCACCTATTTAACCACTG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCCTGGCATCCGTGAACTaGTTATCTGGAAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLLASVN*LSGSHV
Trigger: AACGTGGCTTCCAGATAACCAGTTCACGGATGCCAG...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGGAAAGTTTCTGGAGTaGTTGCTGCGGTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLGKFLE*LLRCWN
Trigger: ATTCCAGCACCGCAGCAACCACTCCAGAAACTTTCC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAATTGTTGCTGGTCCCTaGGATTTTGTTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQIVAGP*DFVVNF
Trigger: AAAATTTACAACAAAATCCCAGGGACCAGCAACAAT...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTACTGTTCCAGTGTCTaGACCATGTGTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLYCSSV*TMCGLC
Trigger: ACAGAGGCCACACATGGTCCAGACACTGGAACAGTA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGATCAGCTTGAAAAACTaGCAAGCTTCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSISLKN*QASEEV
Trigger: GACTTCTTCAGAAGCTTGCCAGTTTTTCAAGCTGAT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAATCAGCTTGAAAAACTaGCAAGCTTCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPISLKN*QASEEV
Trigger: GACTTCTTCAGAAGCTTGCCAGTTTTTCAAGCTGAT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGAAGTTGGCATAATCTaGGAATGCATCAATATACTC +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGEVGII*ECINIL
Trigger: GAGTATATTGATGCATTCTCAGATTATGCCAACTTC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCAATTCCTACAGAAGGTaGAACTGTGGTAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSNSYRR*NCGSIV
Trigger: AACAATGCTACCACAGTTGCACCTTCTGTAGGAATT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTATAGAATTGGTGCTTaGTGTTCTTGTGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: HGGTGTTTFLESSENFVLYRIGA*CSCGPI
Trigger: AATGGGACCACAAGAACAGCAAGCACCAATTCTATA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGGCCATCAATAAAGGATaGGTTCACATAGTCTGTATT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSAINKG*VHIVCI
Trigger: AATACAGACTATGTGAACGCATCCTTTATTGATGGC...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCCAGTGGTTAAATAGGTaGGTCCCAGAGTTATATTTG +
Preference number: 4 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIQWLNR*VPELYL
Trigger: CAAATATAACTCTGGGACCCACCTATTTAACCACTG...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGCCTCAGTGCGGCCGTTaGATAAGCGGAAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQPQCGR*ISGKNW
Trigger: CCAATTCTTTCCGCTTATCCAACGGCCGCACTGAGG...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGGTTCTTCTTCATGTTaGCTGGAAGGTTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLGSSSC*LEGFQS
Trigger: GGACTGGAAACCTTCCAGCCAACATGAAGAAGAACC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp GTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGATTCGCCCCGCTTAACTaGAATGATCACTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VTQSRQFCSKAPQTGEVRFAPLN*NDHSVE
Trigger: TTCAACAGAGTGATCATTCCAGTTAAGCGGGGCGAA...TCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGAAGATGTGCTGGGAATaGAAGGAGGGTCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQKMCWE*KEGPGD
Trigger: ATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTT...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTTCTTTTGGTCCTTGTaGAGCAATGAATTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLFFWSL*SNEFVL
Trigger: AAGAACAAATTCATTGCTGCACAAGGACCAAAAGAA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTCCCAGAGTTATATTTaGGCTGAATGTTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLSQSYI*AECWCH
Trigger: GTGGCACCAACATTCAGCCCAAATATAACTCTGGGA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGATTGTTGCTGGTCCCTaGGATTTTGTTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSIVAGP*DFVVNF
Trigger: AAAATTTACAACAAAATCCCAGGGACCAGCAACAAT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGCGCATCTTGTCATTCTaGATTTTGATTGATGTTAAC +
Preference number: 4 (lower is better)
Translates to: RDTALVLLLPMISVVGMGRILSF*ILIDVN
Trigger: GTTAACATCAATCAAAATCCAGAATGACAAGATGCG...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGCGCATCTTGTCATTCTaGATTTTGATTGATGTTAAC +
Preference number: 4 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSRILSF*ILIDVN
Trigger: GTTAACATCAATCAAAATCCAGAATGACAAGATGCG...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCACGCATCTTGTCATTCTaGATTTTGATTGATGTTAAC +
Preference number: 4 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPRILSF*ILIDVN
Trigger: GTTAACATCAATCAAAATCCAGAATGACAAGATGCG...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTTCGCCCCGCTTAACTaGAATGATCACTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLFAPLN*NDHSVE
Trigger: TTCAACAGAGTGATCATTCCAGTTAAGCGGGGCGAA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGAGCTTATTGTCGTCTaGCATTCTCCGGTTAATTTC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLELIVV*HSPVNF
Trigger: GAAATTAACCGGAGAATGGCAGACGACAATAAGCTC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCTTCTTTTGGTCCTTGTaGAGCAATGAATTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSFFWSL*SNEFVL
Trigger: AAGAACAAATTCATTGCTGCACAAGGACCAAAAGAA...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGGAGGGATATTTACAGTaGATGGTGGTACGGGGACAA +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQEGYLQ*MVVRGQ
Trigger: TTGTCCCCGTACCACCATGCACTGTAAATATCCCTC...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CCA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCATTGTTGCTGGTCCCTaGGATTTTGTTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSIVAGP*DFVVNF
Trigger: AAAATTTACAACAAAATCCCAGGGACCAGCAACAAT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTGCCGAGCTACCTaGAATGGATTTTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLWCRAT*NGFCVY
Trigger: ATAAACACAAAATCCATTCCAGGTAGCTCGGCACCA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGTAGCCGTTGATGAATaGAGCATTGATGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLVAVDE*SIDVIR
Trigger: TCTGATTACATCAATGCTTCATTCATCAACGGCTAC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGGAAGGGCTTGGTATATaGAGACATACTGCATATCGG +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQEGLGI*RHTAYR
Trigger: CCGATATGCAGTATGTCTTCATATACCAAGCCCTTC...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR TCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGAAGTTGGCATAATCTaGGAATGCATCAATATACTC +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLEVGII*ECINIL
Trigger: GAGTATATTGATGCATTCTCAGATTATGCCAACTTC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGCCATCAATAAAGGATaGGTTCACATAGTCTGTATT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLAINKG*VHIVCI
Trigger: AATACAGACTATGTGAACGCATCCTTTATTGATGGC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR GCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGTATAGAATTGGTGCTTaGTGTTCTTGTGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQYRIGA*CSCGPI
Trigger: AATGGGACCACAAGAACAGCAAGCACCAATTCTATA...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR GCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTTCTTTTGGTCCTTGTaGAGCAATGAATTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLFFWSL*SNEFVL
Trigger: AAGAACAAATTCATTGCTGCACAAGGACCAAAAGAA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CCA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTCCATTACCACTCAGTaGAATTCCATAAATACCTTT +
Preference number: 4 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLSITTQ*NSINTF
Trigger: AAAGGTATTTATGGAATTCCACTGAGTGGTAATGGA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR TCA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGGAAGTTGGCATAATCTaGGAATGCATCAATATACTC +
Preference number: 4 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQEVGII*ECINIL
Trigger: GAGTATATTGATGCATTCTCAGATTATGCCAACTTC...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS CCA 90 bp ATGCTCTTTGAACATGTGTCAGAGTCGGGCGTTGGGCGGGACCGCTaGGGACGAGGACAGCGGCTCCGCCTCGGCTCCGCGGCGGCGTTT +
Preference number: 5 (lower is better)
Translates to: MLFEHVSESGVGRDR*GRGQRLRLGSAAAF
Trigger: AAACGCCGCCGCGGAGCCGAGGCGGAGCCGCTGTCCTCGTCCCCAGCGGTCCCGCCCAACGCCCGACTCTGACACATGTTCAAAGAGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431048.5
CDS CCA 90 bp AACCAGGAATCCATGCTTATAGAGTCGGGCGTTGGGCGGGACCGCTaGGGACGAGGACAGCGGCTCCGCCTCGGCTCCGCGGCGGCGTTT +
Preference number: 5 (lower is better)
Translates to: NQESMLIESGVGRDR*GRGQRLRLGSAAAF
Trigger: AAACGCCGCCGCGGAGCCGAGGCGGAGCCGCTGTCCTCGTCCCCAGCGGTCCCGCCCAACGCCCGACTCTATAAGCATGGATTCCTGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455631.5
CDS GCA 90 bp CAGTGCACGGTGATGGGGTGGTTCCCTGACTGCTGCTGCTGCTTCTaGACGGCGGCGATGATGCTGATCATGCCCTTTCCGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: QCTVMGWFPDCCCCF*TAAMMLIMPFPSLG
Trigger: CCCCAGTGACGGAAAGGGCATGATCAGCATCATCGCCGCCGTGCAGAAGCAGCAGCAGCAGTCAGGGAACCACCCCATCACCGTGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS-3UTR CAA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCACAGAGTCGGGCGTaGGGCGGGACCGCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLSQSRA*GGTAGD
Trigger: GTCCCCAGCGGTCCCGCCCAACGCCCGACTCTGTGA...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216877.10
ENST00000318266.9
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTCACAGAGTCGGGCGTaGGGCGGGACCGCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGSQSRA*GGTAGD
Trigger: GTCCCCAGCGGTCCCGCCCAACGCCCGACTCTGTGA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216877.10
ENST00000318266.9
CDS CCA 90 bp CCCTTTCCGTCACTGGGGATGCCCACTTCAGGCCAGCCATGGAAGTaGAACTGCCGGATCTGCCGGCTCTTATTCTCCCTGGTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PFPSLGMPTSGQPWK*NCRICRLLFSLVLV
Trigger: CACCAACACCAGGGAGAATAAGAGCCGGCAGATCCGGCAGTTCCACTTCCATGGCTGGCCTGAAGTGGGCATCCCCAGTGACGGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS-3UTR CAA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCTTATTCTCCCTGGTGTaGGTGACCAGGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFLFSLV*VTRRSR
Trigger: CCGAGACCTCCTGGTCACCAACACCAGGGAGAATAA...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCTCCCTGAAGAGCTTATaGTCGTCTGCCATTCTCCGG +
Preference number: 5 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFSLKSL*SSAILR
Trigger: CCGGAGAATGGCAGACGACAATAAGCTCTTCAGGGA...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCGCTGTGGCTTTCTGTaGGTCATGTCGCCCACCTGC +
Preference number: 5 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLRCGFL*VMSPTC
Trigger: GCAGGTGGGCGACATGACCAACAGAAAGCCACAGCG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCACGCTGTGGCTTTCTGTaGGTCATGTCGCCCACCTGC +
Preference number: 5 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPRCGFL*VMSPTC
Trigger: GCAGGTGGGCGACATGACCAACAGAAAGCCACAGCG...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GCAAAGCACCACAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAAGCTGAGCCAGATAAGCGGAAAGAATaGGAATGGCTCCCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: AKHHRLERSDWPQPKAEPDKRKE*EWLPAC
Trigger: GCAAGCTGGGAGCCATTCCAATTCTTTCCGCTTATC...TGGCTCAGCTTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGGTGGGTATTTCCTGTaGGTGCTTGGGGATCTGGCC +
Preference number: 5 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCGGYFL*VLGDLA
Trigger: GGCCAGATCCCCAAGCACCAACAGGAAATACCCACC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTATTTCCTCTTCCAGCTaGTCCACGGGCAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLISSSS*STGRGG
Trigger: CCCACCCCTGCCCGTGGACAAGCTGGAAGAGGAAAT...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCATTTCCTCTTCCAGCTaGTCCACGGGCAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSISSSS*STGRGG
Trigger: CCCACCCCTGCCCGTGGACAAGCTGGAAGAGGAAAT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATCCCTGAAGAGCTTATaGTCGTCTGCCATTCTCCGG +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQSLKSL*SSAILR
Trigger: CCGGAGAATGGCAGACGACAATAAGCTCTTCAGGGA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAATACTGCATATCGGTTaGCACCATCTGGCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQILHIG*HHLAAL
Trigger: CAGCGCTGCCAGATGGTGCAAACCGATATGCAGTAT...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS GCA 90 bp TATGAAGACATACTGCATATCGGTTTGCACCATCTGGCAGCGCTGTaGCCGGATCCGGCTCACAAAGCCATACACGTCCACCTTCCGTTC +
Preference number: 5 (lower is better)
Translates to: YEDILHIGLHHLAAL*PDPAHKAIHVHLPF
Trigger: GAACGGAAGGTGGACGTGTATGGCTTTGTGAGCCGGATCCGGGCACAGCGCTGCCAGATGGTGCAAACCGATATGCAGTATGTCTTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATGGTGCTTGCTGTTCTaGTGGTCCCATTGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQWCLLF*WSHCQS
Trigger: ACTCTGACAATGGGACCACAAGAACAGCAAGCACCA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCGGTGGGTATTTCCTGTaGGTGCTTGGGGATCTGGCC +
Preference number: 5 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSGGYFL*VLGDLA
Trigger: GGCCAGATCCCCAAGCACCAACAGGAAATACCCACC...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGCATGCAGGGAGAGCGTaGAATTCCTCCCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGHAGRA*NSSLKS
Trigger: GCTCTTCAGGGAGGAATTCAACGCTCTCCCTGCATG...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTCAGTACTGGGCGCACTaGCACTCCTTTCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLQYWAH*HSFLSF
Trigger: GAAGGAGAGAAAGGAGTGCAAGTGCGCCCAGTACTG...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATCCTCCTCTAATCCATaGTTGCTGGTCCCTGGGATT +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQSSSNP*LLVPGI
Trigger: AATCCCAGGGACCAGCAACAATGGATTAGAGGAGGA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGGCCAGAAGTCCTCAATaGTGTGGAGAAGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSARSPQ*CGEEGP
Trigger: AGGGCCCTCTTCTCCACACAATTGAGGACTTCTGGC...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATTATTCTCCCTGGTGTaGGTGACCAGGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPLFSLV*VTRRSR
Trigger: CCGAGACCTCCTGGTCACCAACACCAGGGAGAATAA...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTTATTCTCCCTGGTGTaGGTGACCAGGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGLFSLV*VTRRSR
Trigger: CCGAGACCTCCTGGTCACCAACACCAGGGAGAATAA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGAAGTTTCTGGAGTGGTaGCTGCGGTGCTGGAATTCC +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGKFLEW*LRCWNS
Trigger: GGAATTCCAGCACCGCAGCAACCACTCCAGAAACTT...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTCCTCAGTGCGGCCGTaGGATAAGCGGAAAGAATTG +
Preference number: 5 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCSSVRP*DKRKEL
Trigger: CAATTCTTTCCGCTTATCCAACGGCCGCACTGAGGA...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTCCTCAGTGCGGCCGTaGGATAAGCGGAAAGAATTG +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGSSVRP*DKRKEL
Trigger: CAATTCTTTCCGCTTATCCAACGGCCGCACTGAGGA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGATGGTGGCTGTGTTTaGTTCCCAGATCATCCGCCA +
Preference number: 5 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCDGGCV*FPDHPP
Trigger: TGGCGGATGATCTGGGAACAAAACACAGCCACCATC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGATGGTGGCTGTGTTTaGTTCCCAGATCATCCGCCA +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGDGGCV*FPDHPP
Trigger: TGGCGGATGATCTGGGAACAAAACACAGCCACCATC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAACAGTACTGGGCGCACTaGCACTCCTTTCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SFVAKHHRLERSDWPQPKQYWAH*HSFLSF
Trigger: GAAGGAGAGAAAGGAGTGCAAGTGCGCCCAGTACTG...TTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTATACTGCATATCGGTTaGCACCATCTGGCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLILHIG*HHLAAL
Trigger: CAGCGCTGCCAGATGGTGCAAACCGATATGCAGTAT...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGCCAGAAGTCCTCAATaGTGTGGAGAAGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLARSPQ*CGEEGP
Trigger: AGGGCCCTCTTCTCCACACAATTGAGGACTTCTGGC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS GCA 90 bp TGCAGGGAGAGCGTTGAATTCCTCCCTGAAGAGCTTATTGTCGTCTaGCATTCTCCGGTTAATTTCCTCTTCCAGCTTGTCCACGGGCAG +
Preference number: 5 (lower is better)
Translates to: CRESVEFLPEELIVV*HSPVNFLFQLVHGQ
Trigger: CTGCCCGTGGACAAGCTGGAAGAGGAAATTAACCGGAGAATGGCAGACGACAATAAGCTCTTCAGGGAGGAATTCAACGCTCTCCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS-3UTR CAA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTGGTGCTTGCTGTTCTaGTGGTCCCATTGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCWCLLF*WSHCQS
Trigger: ACTCTGACAATGGGACCACAAGAACAGCAAGCACCA...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATGGTGCTTGCTGTTCTaGTGGTCCCATTGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPWCLLF*WSHCQS
Trigger: ACTCTGACAATGGGACCACAAGAACAGCAAGCACCA...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCAAGTTTCTGGAGTGGTaGCTGCGGTGCTGGAATTCC +
Preference number: 5 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIKFLEW*LRCWNS
Trigger: GGAATTCCAGCACCGCAGCAACCACTCCAGAAACTT...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTAAGTTTCTGGAGTGGTaGCTGCGGTGCTGGAATTCC +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLKFLEW*LRCWNS
Trigger: GGAATTCCAGCACCGCAGCAACCACTCCAGAAACTT...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGGAATGGCTCCCAGCTaGCTTGTATTTCTTAAACCT +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQGMAPS*LVFLKP
Trigger: AGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTCC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGGATAAGCGGAAAGAATaGGAATGGCTCCCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSDKRKE*EWLPAC
Trigger: GCAAGCTGGGAGCCATTCCAATTCTTTCCGCTTATC...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTCCTCAGTGCGGCCGTaGGATAAGCGGAAAGAATTG +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLSSVRP*DKRKEL
Trigger: CAATTCTTTCCGCTTATCCAACGGCCGCACTGAGGA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTATTTCCTGTTGGTGCTaGGGGATCTGGCCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLISCWC*GIWPEV
Trigger: CACTTCTGGCCAGATCCCCAAGCACCAACAGGAAAT...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCATTTCCTGTTGGTGCTaGGGGATCTGGCCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSISCWC*GIWPEV
Trigger: CACTTCTGGCCAGATCCCCAAGCACCAACAGGAAAT...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCATTTCCTCTTCCAGCTaGTCCACGGGCAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLISSSS*STGRGG
Trigger: CCCACCCCTGCCCGTGGACAAGCTGGAAGAGGAAAT...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAATCCTTGTTTTCCTCCTaGGAAGCAGCCTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: SFVAKHHRLERSDWPQPKSLFSS*EAASQV
Trigger: CACCTGTGAGGCTGCTTCCAAGGAGGAAAACAAGGA...TTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTCCTTGTTTTCCTCCTaGGAAGCAGCCTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLSLFSS*EAASQV
Trigger: CACCTGTGAGGCTGCTTCCAAGGAGGAAAACAAGGA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGATGGTGGCTGTGTTTaGTTCCCAGATCATCCGCCA +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLDGGCV*FPDHPP
Trigger: TGGCGGATGATCTGGGAACAAAACACAGCCACCATC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGACTGGCCTCAGCCCAAAATACTGCATATCGGTTaGCACCATCTGGCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: SFVAKHHRLERSDWPQPKILHIG*HHLAAL
Trigger: CAGCGCTGCCAGATGGTGCAAACCGATATGCAGTAT...TTTGGGCTGAGGCCAGTCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTCCTCCTCTAATCCATaGTTGCTGGTCCCTGGGATT +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGSSSNP*LLVPGI
Trigger: AATCCCAGGGACCAGCAACAATGGATTAGAGGAGGA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS GCA 90 bp CGGATCCGGCTCACAAAGCCATACACGTCCACCTTCCGTTCTGTATaGATCATGTCCAGCATGGCATCAATGACGACAAAGGTACCTGTA +
Preference number: 5 (lower is better)
Translates to: RIRLTKPYTSTFRSV*IMSSMASMTTKVPV
Trigger: TACAGGTACCTTTGTCGTCATTGATGCCATGCTGGACATGATGCATACAGAACGGAAGGTGGACGTGTATGGCTTTGTGAGCCGGATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGTAATGCCTATAGAATaGGTGCTTGCTGTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQVMPIE*VLAVLV
Trigger: CACAAGAACAGCAAGCACCAATTCTATAGGCATTAC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATGGCTCCCAGCTTGCTaGTATTTCTTAAACCTTAAC +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQWLPAC*YFLNLN
Trigger: GTTAAGGTTTAAGAAATACAAGCAAGCTGGGAGCCA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGGTGGGTATTTCCTGTaGGTGCTTGGGGATCTGGCC +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLGGYFL*VLGDLA
Trigger: GGCCAGATCCCCAAGCACCAACAGGAAATACCCACC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTCCTCTAATCCATTGTaGCTGGTCCCTGGGATTTTG +
Preference number: 5 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCSSNPL*LVPGIL
Trigger: CAAAATCCCAGGGACCAGCAACAATGGATTAGAGGA...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTCCTCTAATCCATTGTaGCTGGTCCCTGGGATTTTG +
Preference number: 5 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSSSNPL*LVPGIL
Trigger: CAAAATCCCAGGGACCAGCAACAATGGATTAGAGGA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTCCTCTAATCCATTGTaGCTGGTCCCTGGGATTTTG +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGSSNPL*LVPGIL
Trigger: CAAAATCCCAGGGACCAGCAACAATGGATTAGAGGA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCGGTTCTTCTTCATGTaGGCTGGAAGGTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSRFFFM*AGRFPV
Trigger: GACTGGAAACCTTCCAGCCAACATGAAGAAGAACCG...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTCGGTTCTTCTTCATGTaGGCTGGAAGGTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLRFFFM*AGRFPV
Trigger: GACTGGAAACCTTCCAGCCAACATGAAGAAGAACCG...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGCCAGAAGTCCTCAATaGTGTGGAGAAGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEARSPQ*CGEEGP
Trigger: AGGGCCCTCTTCTCCACACAATTGAGGACTTCTGGC...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp GTCTCCCCTGTGCCCCTGTCCTTAAGGAGACTCAGTGAGGACCTGGCCACCTTCTACCTGGAATGGATTTaGTGTTTATCTTCTTTAGGG +
Preference number: 5 (lower is better)
Translates to: VSPVPLSLRRLSEDLATFYLEWI*CLSSLG
Trigger: CCCTAAAGAAGATAAACACAAAATCCATTCCAGGTA...GAAGGTGGCCAGGTCCTCACTGAGTCTCCTTAAGGACAGGGGCACAGGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS CCA 90 bp GTGCTGGAATTCCCCTCCCAGGGTTCTGTTCTGGCATCCGTGAACTaGTTATCTGGAAGCCACGTTCCATTTGGTGAAATTGTAATGCCT +
Preference number: 5 (lower is better)
Translates to: VLEFPSQGSVLASVN*LSGSHVPFGEIVMP
Trigger: AGGCATTACAATTTCACCAAATGGAACGTGGCTTCCAGATAACCAGTTCACGGATGCCAGAACAGAACCCTGGGAGGGGAATTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000430705.5
ENST00000431048.5
ENST00000455631.5
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGACTGTGGTAGCATTGTaGGCACTGACACATATCAGA +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGTVVAL*ALTHIR
Trigger: TCTGATATGTGTCAGTGCCAACAATGCTACCACAGT...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAACTGTGGTAGCATTGTaGGCACTGACACATATCAGA +
Preference number: 5 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPTVVAL*ALTHIR
Trigger: TCTGATATGTGTCAGTGCCAACAATGCTACCACAGT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGACTGTGGTAGCATTGTaGGCACTGACACATATCAGA +
Preference number: 5 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSTVVAL*ALTHIR
Trigger: TCTGATATGTGTCAGTGCCAACAATGCTACCACAGT...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CCAGGACCACTAAACCAAAGATGTGCTGGGAATGAAAGGAGGGTCCTGGAGATCGCAACTGTGGTAGCATaGTTGGCACTGACACATATC +
Preference number: 5 (lower is better)
Translates to: PGPLNQRCAGNERRVLEIATVVA*LALTHI
Trigger: GATATGTGTCAGTGCCAACAATGCTACCACAGTTGC...GATCTCCAGGACCCTCCTTTCATTCCCAGCACATCTTTGGTTTAGTGGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp TACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCGCAACTGTGGTAGCATaGTTGGCACTGACACATATC +
Preference number: 5 (lower is better)
Translates to: YLIVPSVVPEIPLWSYYSATVVA*LALTHI
Trigger: GATATGTGTCAGTGCCAACAATGCTACCACAGTTGC...GGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAAGTGAAGAAGTTGGATTaGAAGTTTTGGCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQVKKLD*KFWPLL
Trigger: AAGAAGAGGCCAAAACTTCAAATCCAACTTCTTCAC...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCGTTCTTGTGGTCCCATaGTCAGAGTCTGAAGAATTG +
Preference number: 5 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCVLVVP*SESEEL
Trigger: CAATTCTTCAGACTCTGACAATGGGACCACAAGAAC...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGTTCTTGTGGTCCCATaGTCAGAGTCTGAAGAATTG +
Preference number: 5 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPVLVVP*SESEEL
Trigger: CAATTCTTCAGACTCTGACAATGGGACCACAAGAAC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCCATGCAGGGAGAGCGTaGAATTCCTCCCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLHAGRA*NSSLKS
Trigger: GCTCTTCAGGGAGGAATTCAACGCTCTCCCTGCATG...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCCAGTACTGGGCGCACTaGCACTCCTTTCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLQYWAH*HSFLSF
Trigger: GAAGGAGAGAAAGGAGTGCAAGTGCGCCCAGTACTG...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGGAATGGCTCCCAGCTaGCTTGTATTTCTTAAACCT +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLGMAPS*LVFLKP
Trigger: AGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTCC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTATGCTCCAGAAGGGCTaGGTATATGAAGACATACTG +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLMLQKG*VYEDIL
Trigger: CAGTATGTCTTCATATACCAAGCCCTTCTGGAGCAT...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GGGACCAGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAATACCTGGAATGGATTTaGTGTTTATCTTCTTTAGGG +
Preference number: 5 (lower is better)
Translates to: GTRERGEGYLQCMVVRGQYLEWI*CLSSLG
Trigger: CCCTAAAGAAGATAAACACAAAATCCATTCCAGGTA...TTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCTGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTGTGAGAGAAATCAGCTaGAAAAACTGGCAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLVREIS*KNWQAS
Trigger: AGAAGCTTGCCAGTTTTTCAAGCTGATTTCTCTCAC...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAGTTGGATTTGAAGTTTaGGCCTCTTCTTTAACTGGT +
Preference number: 5 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPVGFEV*ASSLTG
Trigger: ACCAGTTAAAGAAGAGGCCAAAACTTCAAATCCAAC...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGGGAGAGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTGTTGGATTTGAAGTTTaGGCCTCTTCTTTAACTGGT +
Preference number: 5 (lower is better)
Translates to: RERGEGYLQCMVVRGQPLVGFEV*ASSLTG
Trigger: ACCAGTTAAAGAAGAGGCCAAAACTTCAAATCCAAC...AAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCTCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGGTGAAGAAGTTGGATTaGAAGTTTTGGCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGVKKLD*KFWPLL
Trigger: AAGAAGAGGCCAAAACTTCAAATCCAACTTCTTCAC...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGTAATGCCTATAGAATaGGTGCTTGCTGTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLVMPIE*VLAVLV
Trigger: CACAAGAACAGCAAGCACCAATTCTATAGGCATTAC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGATAAGCGGAAAGAATaGGAATGGCTCCCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLDKRKE*EWLPAC
Trigger: GCAAGCTGGGAGCCATTCCAATTCTTTCCGCTTATC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTCCTCCTCTAATCCATaGTTGCTGGTCCCTGGGATT +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLSSSNP*LLVPGI
Trigger: AATCCCAGGGACCAGCAACAATGGATTAGAGGAGGA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTTTCCAGTCCGCATCTaGTCATTCTGGATTTTGATT +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGFPVRI*SFWILI
Trigger: AATCAAAATCCAGAATGACAAGATGCGGACTGGAAA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TGCATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTCCAGTCCGCATCTaGTCATTCTGGATTTTGATT +
Preference number: 5 (lower is better)
Translates to: CMVVRGQPLSSRALRTLCFPVRI*SFWILI
Trigger: AATCAAAATCCAGAATGACAAGATGCGGACTGGAAA...GCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTGTGAGAGAAATCAGCTaGAAAAACTGGCAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLVREIS*KNWQAS
Trigger: AGAAGCTTGCCAGTTTTTCAAGCTGATTTCTCTCAC...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGAGATACCGCTCTGGTCCTATTACTCCCCATGATATCAGTGGTGGGGATGGGGTGTGTCCTTAGTTATTaGAACTGCATCATCCATTAC +
Preference number: 5 (lower is better)
Translates to: RDTALVLLLPMISVVGMGCVLSY*NCIIHY
Trigger: GTAATGGATGATGCAGTTCAAATAACTAAGGACACA...CCCCATCCCCACCACTGATATCATGGGGAGTAATAGGACCAGAGCGGTATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGCAACTGTGGTAGCATaGTTGGCACTGACACATATC +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLATVVA*LALTHI
Trigger: GATATGTGTCAGTGCCAACAATGCTACCACAGTTGC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCAAAGTTAGTGAAGAAGTaGGATTTGAAGTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPKLVKK*DLKFWP
Trigger: AGGCCAAAACTTCAAATCCAACTTCTTCACTAACTT...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTTCTTGTGGTCCCATaGTCAGAGTCTGAAGAATTG +
Preference number: 5 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEVLVVP*SESEEL
Trigger: CAATTCTTCAGACTCTGACAATGGGACCACAAGAAC...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp AGAGGGGAGGGATATTTACAGTGCATGGTGGTACGGGGACAACCACTTTCCTCGTTCTTCTTTTGGTCCTaGTGCAGCAATGAATTTGTT +
Preference number: 5 (lower is better)
Translates to: RGEGYLQCMVVRGQPLSSFFFWS*CSNEFV
Trigger: AACAAATTCATTGCTGCACAAGGACCAAAAGAAGAA...CGAGGAAAGTGGTTGTCCCCGTACCACCATGCACTGTAAATATCCCTCCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGGTCCTATTACTCCCCATTCTTCTTTTGGTCCTaGTGCAGCAATGAATTTGTT +
Preference number: 5 (lower is better)
Translates to: LIVPSVVPEIPLWSYYSPFFFWS*CSNEFV
Trigger: AACAAATTCATTGCTGCACAAGGACCAAAAGAAGAA...TGGGGAGTAATAGGACCAGAGCGGTATCTCTGGCACCACACTAGGGACTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGATGCTCCAGAAGGGCTaGGTATATGAAGACATACTG +
Preference number: 5 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEMLQKG*VYEDIL
Trigger: CAGTATGTCTTCATATACCAAGCCCTTCTGGAGCAT...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTTGTGTCCTTAGTTATTaGAACTGCATCATCCATTAC +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLCVLSY*NCIIHY
Trigger: GTAATGGATGATGCAGTTCAAATAACTAAGGACACA...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp CATGGTGGTACGGGGACAACCACTTTCCTCGAGAGCTCTGAGAACTTTGTGCTTAAGTTAGTGAAGAAGTaGGATTTGAAGTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: HGGTGTTTFLESSENFVLKLVKK*DLKFWP
Trigger: AGGCCAAAACTTCAAATCCAACTTCTTCACTAACTT...AAGCACAAAGTTCTCAGAGCTCTCGAGGAAAGTGGTTGTCCCCGTACCACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTAATGCCTATAGAATaGGTGCTTGCTGTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEVMPIE*VLAVLV
Trigger: CACAAGAACAGCAAGCACCAATTCTATAGGCATTAC...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp GATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGTGGCTCCCAGCTTGCTaGTATTTCTTAAACCTTAAC +
Preference number: 5 (lower is better)
Translates to: DRVTQSRQFCSKAPQTGEWLPAC*YFLNLN
Trigger: GTTAAGGTTTAAGAAATACAAGCAAGCTGGGAGCCA...CTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCATGCTCCAGAAGGGCTaGGTATATGAAGACATACTG +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLMLQKG*VYEDIL
Trigger: CAGTATGTCTTCATATACCAAGCCCTTCTGGAGCAT...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGCGGTTCTTCTTCATGTaGGCTGGAAGGTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQRFFFM*AGRFPV
Trigger: GACTGGAAACCTTCCAGCCAACATGAAGAAGAACCG...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS TCA 90 bp TCTGGCATCCGTGAACTGGTTATCTGGAAGCCACGTTCCATTTGGTaGAATTGTAATGCCTATAGAATTGGTGCTTGCTGTTCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: SGIRELVIWKPRSIW*NCNAYRIGACCSCG
Trigger: ACCACAAGAACAGCAAGCACCAATTCTATAGGCATTACAATTTCACCAAATGGAACGTGGCTTCCAGATAACCAGTTCACGGATGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000430705.5
ENST00000431048.5
ENST00000455631.5
CDS CCA 90 bp TCCACATCCTCAGTGCGGCCGTTGGATAAGCGGAAAGAATTGGAATaGCTCCCAGCTTGCTTGTATTTCTTAAACCTTAACATGTACAAA +
Preference number: 5 (lower is better)
Translates to: STSSVRPLDKRKELE*LPACLYFLNLNMYK
Trigger: TTTGTACATGTTAAGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTCCAATTCTTTCCGCTTATCCAACGGCCGCACTGAGGATGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS-3UTR CAA 90 bp GTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGACTGGAGAGGTCAGAGTTGGATTTGAAGTTTaGGCCTCTTCTTTAACTGGT +
Preference number: 5 (lower is better)
Translates to: VTQSRQFCSKAPQTGEVRVGFEV*ASSLTG
Trigger: ACCAGTTAAAGAAGAGGCCAAAACTTCAAATCCAAC...TCTGACCTCTCCAGTCTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCGTGAAGAAGTTGGATTaGAAGTTTTGGCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLVKKLD*KFWPLL
Trigger: AAGAAGAGGCCAAAACTTCAAATCCAACTTCTTCAC...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp TTTATCCTAGATAGGGTGACACAATCCAGACAGTTTTGTAGCAAAGCACCACAGGGAATGGCTCCCAGCTaGCTTGTATTTCTTAAACCT +
Preference number: 5 (lower is better)
Translates to: FILDRVTQSRQFCSKAPQGMAPS*LVFLKP
Trigger: AGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTCC...CTGTGGTGCTTTGCTACAAAACTGTCTGGATTGTGTCACCCTATCTAGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216877.10
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCTGTGTCCTTAGTTATTaGAACTGCATCATCCATTAC +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLCVLSY*NCIIHY
Trigger: GTAATGGATGATGCAGTTCAAATAACTAAGGACACA...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS-3UTR CAA 90 bp AGTCAAAGCTTTTATTACCTGATAGTCCCTAGTGTGGTGCCAGAGATACCGCTCAAGTTAGTGAAGAAGTaGGATTTGAAGTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SQSFYYLIVPSVVPEIPLKLVKK*DLKFWP
Trigger: AGGCCAAAACTTCAAATCCAACTTCTTCACTAACTT...GAGCGGTATCTCTGGCACCACACTAGGGACTATCAGGTAATAAAAGCTTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
CDS TCA 72 bp GGCGGCGGCCTCGCCTCCATGGCGAGGGGAAGCGGCTaGGGGGCGACTGGGCGGGCGACAGTGATGGCGGCA +
Preference number: 6 (lower is better)
Translates to: GGGLASMARGSG*GATGRATVMAA
Trigger: TGCCGCCATCACTGTCGCCCGCCCAGTCGCCCCTCAGCCGCTTCCCCTCGCCATGGAGGCGAGGCCGCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000399903.7
ENST00000431048.5
ENST00000455631.5
CDS CCA 72 bp AGTTGTGTCACAGAGTCGGGCGTTGGGCGGGACCGCTaGGGACGAGGACAGCGGCTCCGCCTCGGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: SCVTESGVGRDR*GRGQRLRLGSA
Trigger: CGCGGAGCCGAGGCGGAGCCGCTGTCCTCGTCCCCAGCGGTCCCGCCCAACGCCCGACTCTGTGACACAACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000399903.7
ENST00000430705.5
CDS CCA 72 bp GAACATGTGTCAGAGTCGGGCGTTGGGCGGGACCGCTaGGGACGAGGACAGCGGCTCCGCCTCGGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: EHVSESGVGRDR*GRGQRLRLGSA
Trigger: CGCGGAGCCGAGGCGGAGCCGCTGTCCTCGTCCCCAGCGGTCCCGCCCAACGCCCGACTCTGACACATGTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431048.5
CDS CCA 72 bp TCCATGCTTATAGAGTCGGGCGTTGGGCGGGACCGCTaGGGACGAGGACAGCGGCTCCGCCTCGGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: SMLIESGVGRDR*GRGQRLRLGSA
Trigger: CGCGGAGCCGAGGCGGAGCCGCTGTCCTCGTCCCCAGCGGTCCCGCCCAACGCCCGACTCTATAAGCATGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455631.5
CDS CAA 72 bp CGCCGCACTCGCCGCAGCCTCGCTCCCGACCCGGCCTaGGCTGTAAGACGCGTGTTCATTGGCTGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: RRTRRSLAPDPA*AVRRVFIGCSE
Trigger: CTCTGAACAGCCAATGAACACGCGTCTTACAGCCAAGGCCGGGTCGGGAGCGAGGCTGCGGCGAGTGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455631.5
CDS CAA 90 bp CTCTGTCAGCGCCGCACTCGCCGCAGCCTCGCTCCCGACCCGGCCTaGGCTGTAAGACGCGTGTTCATTGGCTGTTCAGAGACAGGCGCT +
Preference number: 6 (lower is better)
Translates to: LCQRRTRRSLAPDPA*AVRRVFIGCSETGA
Trigger: AGCGCCTGTCTCTGAACAGCCAATGAACACGCGTCTTACAGCCAAGGCCGGGTCGGGAGCGAGGCTGCGGCGAGTGCGGCGCTGACAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455631.5
CDS GCA 72 bp TGCACGGTGATGGGGTGGTTCCCTGACTGCTGCTGCTaGTTCTGCACGGCGGCGATGATGCTGATCATGCCC +
Preference number: 6 (lower is better)
Translates to: CTVMGWFPDCCC*FCTAAMMLIMP
Trigger: GGGCATGATCAGCATCATCGCCGCCGTGCAGAAGCAGCAGCAGCAGTCAGGGAACCACCCCATCACCGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CCA 72 bp AATGAACCAGGAATCCATGCTTATAGAGTCGGGCGTTaGGCGGGACCGCTGGGGACGAGGACAGCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: NEPGIHAYRVGR*AGPLGTRTAAP
Trigger: CGGAGCCGCTGTCCTCGTCCCCAGCGGTCCCGCCCAACGCCCGACTCTATAAGCATGGATTCCTGGTTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455631.5
CDS GCA 72 bp GTGATGGGGTGGTTCCCTGACTGCTGCTGCTGCTTCTaGACGGCGGCGATGATGCTGATCATGCCCTTTCCG +
Preference number: 6 (lower is better)
Translates to: VMGWFPDCCCCF*TAAMMLIMPFP
Trigger: CGGAAAGGGCATGATCAGCATCATCGCCGCCGTGCAGAAGCAGCAGCAGCAGTCAGGGAACCACCCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS GCA 72 bp CAGTGCACGGTGATGGGGTGGTTCCCTGACTGCTGCTaGTGCTTCTGCACGGCGGCGATGATGCTGATCATG +
Preference number: 6 (lower is better)
Translates to: QCTVMGWFPDCC*CFCTAAMMLIM
Trigger: CATGATCAGCATCATCGCCGCCGTGCAGAAGCAGCAGCAGCAGTCAGGGAACCACCCCATCACCGTGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CCA 72 bp GTATTTCCTGTTGGTGCTTGGGGATCTGGCCAGAAGTaGCACACTCTGGGGCTCCACATCCTCAGTGCGGCC +
Preference number: 6 (lower is better)
Translates to: VFPVGAWGSGQK*HTLGLHILSAA
Trigger: GGCCGCACTGAGGATGTGGAGCCCCAGAGTGTGCCACTTCTGGCCAGATCCCCAAGCACCAACAGGAAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS CCA 72 bp TCACTGGGGATGCCCACTTCAGGCCAGCCATGGAAGTaGAACTGCCGGATCTGCCGGCTCTTATTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: SLGMPTSGQPWK*NCRICRLLFSL
Trigger: CAGGGAGAATAAGAGCCGGCAGATCCGGCAGTTCCACTTCCATGGCTGGCCTGAAGTGGGCATCCCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CCA 72 bp TTTCCGTCACTGGGGATGCCCACTTCAGGCCAGCCATaGAAGTGGAACTGCCGGATCTGCCGGCTCTTATTC +
Preference number: 6 (lower is better)
Translates to: FPSLGMPTSGQP*KWNCRICRLLF
Trigger: GAATAAGAGCCGGCAGATCCGGCAGTTCCACTTCCATGGCTGGCCTGAAGTGGGCATCCCCAGTGACGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CAA 72 bp GGCACACTCTGGGGCTCCACATCCTCAGTGCGGCCGTaGGATAAGCGGAAAGAATTGGAATGGCTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: GTLWGSTSSVRP*DKRKELEWLPA
Trigger: AGCTGGGAGCCATTCCAATTCTTTCCGCTTATCCAACGGCCGCACTGAGGATGTGGAGCCCCAGAGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS GCA 72 bp ATACTGCATATCGGTTTGCACCATCTGGCAGCGCTGTaGCCGGATCCGGCTCACAAAGCCATACACGTCCAC +
Preference number: 6 (lower is better)
Translates to: ILHIGLHHLAAL*PDPAHKAIHVH
Trigger: GTGGACGTGTATGGCTTTGTGAGCCGGATCCGGGCACAGCGCTGCCAGATGGTGCAAACCGATATGCAGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CCA 72 bp GCACACTCTGGGGCTCCACATCCTCAGTGCGGCCGTTaGATAAGCGGAAAGAATTGGAATGGCTCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: AHSGAPHPQCGR*ISGKNWNGSQL
Trigger: AAGCTGGGAGCCATTCCAATTCTTTCCGCTTATCCAACGGCCGCACTGAGGATGTGGAGCCCCAGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS GCA 72 bp GCTCTTGACAGTCTGGAAGACATCCAAAATCCCCTCTaGTTTCACACGCTCCAGGACGGTGCTCAGGGCACA +
Preference number: 6 (lower is better)
Translates to: ALDSLEDIQNPL*FHTLQDGAQGT
Trigger: TGTGCCCTGAGCACCGTCCTGGAGCGTGTGAAAGCAGAGGGGATTTTGGATGTCTTCCAGACTGTCAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CCA 72 bp CCAGCTGGTAAAGTGGAACTGAGTGATGAGGCGCTGTaGCTTTCTGTTGGTCATGTCGCCCACCTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: PAGKVELSDEAL*LSVGHVAHLLD
Trigger: ATCCAGCAGGTGGGCGACATGACCAACAGAAAGCCACAGCGCCTCATCACTCAGTTCCACTTTACCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CCA 72 bp TTGGTGTCTCATCTGAAGGAGGGAAAGTTTCTGGAGTaGTTGCTGCGGTGCTGGAATTCCCCTCCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: LVSHLKEGKFLE*LLRCWNSPPRV
Trigger: AACCCTGGGAGGGGAATTCCAGCACCGCAGCAACCACTCCAGAAACTTTCCCTCCTTCAGATGAGACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000455631.5
CDS CAA 72 bp TCGTCTGCCATTCTCCGGTTAATTTCCTCTTCCAGCTaGTCCACGGGCAGGGGTGGGTATTTCCTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: SSAILRLISSSS*STGRGGYFLLV
Trigger: CACCAACAGGAAATACCCACCCCTGCCCGTGGACAAGCTGGAAGAGGAAATTAACCGGAGAATGGCAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS CAA 90 bp CCTTCGAGTCAGAATTACCTGAAGGAGGGAAAGTTTCTGGAGTGGTaGCTGCGGTGCTGGAATTCCCCTCCCAGGGTTCTGTTCTGGCAT +
Preference number: 6 (lower is better)
Translates to: PSSQNYLKEGKFLEW*LRCWNSPPRVLFWH
Trigger: ATGCCAGAACAGAACCCTGGGAGGGGAATTCCAGCACCGCAGCAACCACTCCAGAAACTTTCCCTCCTTCAGGTAATTCTGACTCGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399903.7
ENST00000430705.5
CDS TCA 72 bp TGGAATTCCCCTCCCAGGGTTCTGTTCTGGCATCCGTaGACTGGTTATCTGGAAGCCACGTTCCATTTGGTG +
Preference number: 6 (lower is better)
Translates to: WNSPPRVLFWHP*TGYLEATFHLV
Trigger: CACCAAATGGAACGTGGCTTCCAGATAACCAGTTCACGGATGCCAGAACAGAACCCTGGGAGGGGAATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000430705.5
ENST00000431048.5
ENST00000455631.5
CDS CCA 72 bp TATATGAAGACATACTGCATATCGGTTTGCACCATCTaGCAGCGCTGTGCCCGGATCCGGCTCACAAAGCCA +
Preference number: 6 (lower is better)
Translates to: YMKTYCISVCTI*QRCARIRLTKP
Trigger: TGGCTTTGTGAGCCGGATCCGGGCACAGCGCTGCCAGATGGTGCAAACCGATATGCAGTATGTCTTCATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CCA 72 bp CACTGTAATATCTCCATAGGACACCAGTCCATCAGATaGCCAGTACTGGGCACACTTCTCCTGGCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: HCNISIGHQSIR*PVLGTLLLASL
Trigger: GAGAGAGGCCAGGAGAAGTGTGCCCAGTACTGGCCATCTGATGGACTGGTGTCCTATGGAGATATTACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CCA 72 bp AGTCAGAATTACCTGAAGGAGGGAAAGTTTCTGGAGTaGTTGCTGCGGTGCTGGAATTCCCCTCCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: SQNYLKEGKFLE*LLRCWNSPPRV
Trigger: AACCCTGGGAGGGGAATTCCAGCACCGCAGCAACCACTCCAGAAACTTTCCCTCCTTCAGGTAATTCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399903.7
ENST00000430705.5
CDS CAA 90 bp AGCTTATTGTCGTCTGCCATTCTCCGGTTAATTTCCTCTTCCAGCTaGTCCACGGGCAGGGGTGGGTATTTCCTGTTGGTGCTTGGGGAT +
Preference number: 6 (lower is better)
Translates to: SLLSSAILRLISSSS*STGRGGYFLLVLGD
Trigger: ATCCCCAAGCACCAACAGGAAATACCCACCCCTGCCCGTGGACAAGCTGGAAGAGGAAATTAACCGGAGAATGGCAGACGACAATAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS CAA 90 bp TGGGGCTCCACATCCTCAGTGCGGCCGTTGGATAAGCGGAAAGAATaGGAATGGCTCCCAGCTTGCTTGTATTTCTTAAACCTTAACATG +
Preference number: 6 (lower is better)
Translates to: WGSTSSVRPLDKRKE*EWLPACLYFLNLNM
Trigger: CATGTTAAGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTCCAATTCTTTCCGCTTATCCAACGGCCGCACTGAGGATGTGGAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS GCA 72 bp CTCACAAAGCCATACACGTCCACCTTCCGTTCTGTATaGATCATGTCCAGCATGGCATCAATGACGACAAAG +
Preference number: 6 (lower is better)
Translates to: LTKPYTSTFRSV*IMSSMASMTTK
Trigger: CTTTGTCGTCATTGATGCCATGCTGGACATGATGCATACAGAACGGAAGGTGGACGTGTATGGCTTTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS GCA 72 bp ATAGGAGTCCTTCTGCCGGTAGCCATCAATAAAGGATaGGTTCACATAGTCTGTATTCTCTTCGCCCCGCTT +
Preference number: 6 (lower is better)
Translates to: IGVLLPVAINKG*VHIVCILFAPL
Trigger: AAGCGGGGCGAAGAGAATACAGACTATGTGAACGCATCCTTTATTGATGGCTACCGGCAGAAGGACTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS TCA 72 bp TTATCACCAGGGGAGGGTGGAGTAGGAACAGCACTCTaGAGAGTTGCCAGTGAGAGAAATCAGCTTGAAAAA +
Preference number: 6 (lower is better)
Translates to: LSPGEGGVGTAL*RVASERNQLEK
Trigger: TTTTTCAAGCTGATTTCTCTCACTGGCAACTCTTCAGAGTGCTGTTCCTACTCCACCCTCCCCTGGTGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318266.9
ENST00000356147.3
CDS GCA 72 bp AGCGTTGAATTCCTCCCTGAAGAGCTTATTGTCGTCTaGCATTCTCCGGTTAATTTCCTCTTCCAGCTTGTC +
Preference number: 6 (lower is better)
Translates to: SVEFLPEELIVV*HSPVNFLFQLV
Trigger: GACAAGCTGGAAGAGGAAATTAACCGGAGAATGGCAGACGACAATAAGCTCTTCAGGGAGGAATTCAACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS CAA 72 bp ACATCCTCAGTGCGGCCGTTGGATAAGCGGAAAGAATaGGAATGGCTCCCAGCTTGCTTGTATTTCTTAAAC +
Preference number: 6 (lower is better)
Translates to: TSSVRPLDKRKE*EWLPACLYFLN
Trigger: GTTTAAGAAATACAAGCAAGCTGGGAGCCATTCCAATTCTTTCCGCTTATCCAACGGCCGCACTGAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5
CDS CAA 90 bp TCTGGAAGCCACGTTCCATTTGGTGAAATTGTAATGCCTATAGAATaGGTGCTTGCTGTTCTTGTGGTCCCATTGTCAGAGTCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: SGSHVPFGEIVMPIE*VLAVLVVPLSESEE
Trigger: TTCTTCAGACTCTGACAATGGGACCACAAGAACAGCAAGCACCAATTCTATAGGCATTACAATTTCACCAAATGGAACGTGGCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000430705.5
ENST00000431048.5
ENST00000455631.5
CDS TCA 72 bp TGGTTAAATAGGTGGGTCCCAGAGTTATATTTGGGCTaGATGTTGGTGCCACAGAAAGAGAAGTTAGTGAAG +
Preference number: 6 (lower is better)
Translates to: WLNRWVPELYLG*MLVPQKEKLVK
Trigger: CTTCACTAACTTCTCTTTCTGTGGCACCAACATTCAGCCCAAATATAACTCTGGGACCCACCTATTTAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000430705.5
ENST00000431048.5
ENST00000455631.5
CDS TCA 72 bp CGTGAACTGGTTATCTGGAAGCCACGTTCCATTTGGTaGAATTGTAATGCCTATAGAATTGGTGCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: RELVIWKPRSIW*NCNAYRIGACC
Trigger: ACAGCAAGCACCAATTCTATAGGCATTACAATTTCACCAAATGGAACGTGGCTTCCAGATAACCAGTTCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000430705.5
ENST00000431048.5
ENST00000455631.5
CDS CAA 90 bp ACACGGTTCTTCTTCATGTTGGCTGGAAGGTTTCCAGTCCGCATCTaGTCATTCTGGATTTTGATTGATGTTAACTTCTTAAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: TRFFFMLAGRFPVRI*SFWILIDVNFLNSS
Trigger: GGAGGAGTTTAAGAAGTTAACATCAATCAAAATCCAGAATGACAAGATGCGGACTGGAAACCTTCCAGCCAACATGAAGAAGAACCGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS CAA 72 bp TTCTTCATGTTGGCTGGAAGGTTTCCAGTCCGCATCTaGTCATTCTGGATTTTGATTGATGTTAACTTCTTA +
Preference number: 6 (lower is better)
Translates to: FFMLAGRFPVRI*SFWILIDVNFL
Trigger: TAAGAAGTTAACATCAATCAAAATCCAGAATGACAAGATGCGGACTGGAAACCTTCCAGCCAACATGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
CDS GCA 72 bp TTGGATAAGCGGAAAGAATTGGAATGGCTCCCAGCTTaGTTGTATTTCTTAAACCTTAACATGTACAAAACT +
Preference number: 6 (lower is better)
Translates to: LDKRKELEWLPA*LYFLNLNMYKT
Trigger: AGTTTTGTACATGTTAAGGTTTAAGAAATACAAGCAAGCTGGGAGCCATTCCAATTCTTTCCGCTTATCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216877.10
ENST00000318266.9
ENST00000356147.3
ENST00000399903.7
ENST00000455631.5