RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPN9 (Homo sapiens)

Ensembl gene IDs: ENSG00000169410

Ensembl transcript IDs: ENST00000306726.6, ENST00000561731.1, ENST00000563835.1, ENST00000564970.1, ENST00000568108.1, ENST00000618819.5

Found 475 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCAGAACTCAAAGTCTCAGATACTGAAGGCTTGGGTCCCTCCCTaGCTCCCTCATCCCTCCCAGACCAGCTCCTGGACCCCCTCCCTC +
Preference number: 1 (lower is better)
Translates to: CQNSKSQILKAWVPP*LPHPSQTSSWTPSL
Trigger: GAGGGAGGGGGTCCAGGAGCTGGTCTGGGAGGGATGAGGGAGGCAGGGAGGGACCCAAGCCTTCAGTATCTGAGACTTTGAGTTCTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 90 bp CTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTaGCTGCTCAGTGAGTTCATCTCTACCCTCCGCCTCCCATCCCTG +
Preference number: 1 (lower is better)
Translates to: LPLLPSKIRTDCIWL*LLSEFISTLRLPSL
Trigger: CAGGGATGGGAGGCGGAGGGTAGAGATGAACTCACTGAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR GCA 90 bp CCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTaGTCAGTGAGTTCATCTCTACCCTCCGCCTCCCATCCCTGGGAT +
Preference number: 1 (lower is better)
Translates to: PSFLLRFVPIAFGSG*SVSSSLPSASHPWD
Trigger: ATCCCAGGGATGGGAGGCGGAGGGTAGAGATGAACTCACTGAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR GCA 90 bp CTCATACCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTaGATTTGGCTCTGGCTGCTCAGTGAGTTCATCTCTACCCTCCGC +
Preference number: 1 (lower is better)
Translates to: LIPGLPLLPSKIRTD*IWLWLLSEFISTLR
Trigger: GCGGAGGGTAGAGATGAACTCACTGAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGGTATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 90 bp GCACCTAGCATAGTGCTTAGCACATCTCAAGCACTGAACTGGTGCTaGTCCCTCTGTCCAGAGATAGGGCCATGGCCTACAGACAAGGTG +
Preference number: 1 (lower is better)
Translates to: APSIVLSTSQALNWC*SLCPEIGPWPTDKV
Trigger: CACCTTGTCTGTAGGCCATGGCCCTATCTCTGGACAGAGGGACCAGCACCAGTTCAGTGCTTGAGATGTGCTAAGCACTATGCTAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 90 bp GGAAAAGCACCTAGCATAGTGCTTAGCACATCTCAAGCACTGAACTaGTGCTGGTCCCTCTGTCCAGAGATAGGGCCATGGCCTACAGAC +
Preference number: 1 (lower is better)
Translates to: GKAPSIVLSTSQALN*CWSLCPEIGPWPTD
Trigger: GTCTGTAGGCCATGGCCCTATCTCTGGACAGAGGGACCAGCACCAGTTCAGTGCTTGAGATGTGCTAAGCACTATGCTAGGTGCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR TCA 90 bp GCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATaGTATGGGGAGTGGTCTTCCATGTACAAAGCTTCTGGTTCCTTT +
Preference number: 1 (lower is better)
Translates to: ATTAPTGQAINSQQV*YGEWSSMYKASGSF
Trigger: AAAGGAACCAGAAGCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 90 bp AAAGCACCTAGCATAGTGCTTAGCACATCTCAAGCACTGAACTGGTaGTGGTCCCTCTGTCCAGAGATAGGGCCATGGCCTACAGACAAG +
Preference number: 1 (lower is better)
Translates to: KAPSIVLSTSQALNW*WSLCPEIGPWPTDK
Trigger: CTTGTCTGTAGGCCATGGCCCTATCTCTGGACAGAGGGACCAGCACCAGTTCAGTGCTTGAGATGTGCTAAGCACTATGCTAGGTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR TCA 90 bp ACTATAGGGCGGATACCTCCTAAGAGAAAAAGATGGTTCCCAGGCTaGTGGGCATTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTT +
Preference number: 1 (lower is better)
Translates to: TIGRIPPKRKRWFPG*WAFPFLPLVGSQWF
Trigger: AAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTTCTCTTAGGAGGTATCCGCCCTATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 90 bp AACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATATaGGGAGTGGTCTTCCATGTACAAAGCTTCTGGTTCCTTTCTTTC +
Preference number: 1 (lower is better)
Translates to: NCPNWAGHQQPTGMI*GVVFHVQSFWFLSF
Trigger: GAAAGAAAGGAACCAGAAGCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 90 bp CAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTaGACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGC +
Preference number: 1 (lower is better)
Translates to: QFHHIYLAKGKGCLA*TRVLGDTRKKLIHG
Trigger: GCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR GCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTaGGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCA +
Preference number: 1 (lower is better)
Translates to: VAISPHLSSQRERLP*VHTCAGRHKKEVDP
Trigger: TGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTaGAAGGAGATAAGTCATTACTTAAGGAAGGGGCCCTGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: VSPQTNTFLAPTGGN*KEISHYLRKGPCGR
Trigger: CCTGCCACAGGGCCCCTTCCTTAAGTAATGACTTATCTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 90 bp AGTGGGAGCCAACTCAACCCAAGTAAAGGCCTAATAGCTCCTCTATaGGTGTTTGCACTGTCTAACAAAGAACTGGACCCTGACAGTCAG +
Preference number: 1 (lower is better)
Translates to: SGSQLNPSKGLIAPL*VFALSNKELDPDSQ
Trigger: CTGACTGTCAGGGTCCAGTTCTTTGTTAGACAGTGCAAACACCCATAGAGGAGCTATTAGGCCTTTACTTGGGTTGAGTTGGCTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR TCA 90 bp GGAGAAGGGAGAGAAGATAATATCTCACTGAATTGTTGTGAGGTTTaGATGAGGCAGGGTGGGGGAAAAGCACCTAGCATAGTGCTTAGC +
Preference number: 1 (lower is better)
Translates to: GEGREDNISLNCCEV*MRQGGGKAPSIVLS
Trigger: GCTAAGCACTATGCTAGGTGCTTTTCCCCCACCCTGCCTCATTCAAACCTCACAACAATTCAGTGAGATATTATCTTCTCTCCCTTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 90 bp AATCTAAGGACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATaGTTTGCCTCTGAGAAACCCTGTAGACCCCACATTAAGAAACAG +
Preference number: 1 (lower is better)
Translates to: NLRTRLGAIGPLVCS*FASEKPCRPHIKKQ
Trigger: CTGTTTCTTAATGTGGGGTCTACAGGGTTTCTCAGAGGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 90 bp ACACATAAGTGCACACACACACACACACAGAATGACAGAAAGGACTaGAATACACGCCCTACTTATAAACGTGCTTGGCACTCAGGACGA +
Preference number: 1 (lower is better)
Translates to: THKCTHTHTQNDRKD*NTRPTYKRAWHSGR
Trigger: TCGTCCTGAGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCACTTATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 90 bp TATAAACGTGCTTGGCACTCAGGACGATCTCTAGAATATGTAACTTaGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCC +
Preference number: 1 (lower is better)
Translates to: YKRAWHSGRSLEYVT*SSSLGRKANAHQTS
Trigger: GGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTCTAGAGATCGTCCTGAGTGCCAAGCACGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 90 bp AATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTaGCACTCAGGACGATCTCTAGAATATGTAACTTGGTCAAGCTCT +
Preference number: 1 (lower is better)
Translates to: NDRKDWNTRPTYKRA*HSGRSLEYVTWSSS
Trigger: AGAGCTTGACCAAGTTACATATTCTAGAGATCGTCCTGAGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR TCA 90 bp GGCCAAGTAAATGTAGAAAAATCATCGGATAAGGGAAATCCATGCTaGGCTAACCCAGTGTCACCACAAACTAATACATTCTTGGCTCCA +
Preference number: 1 (lower is better)
Translates to: GQVNVEKSSDKGNPC*ANPVSPQTNTFLAP
Trigger: TGGAGCCAAGAATGTATTAGTTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTTCTACATTTACTTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR GCA 90 bp TGGTTTCTCAGATTTCCAAGAATCTCTGTTCACTTCTTATGTTTGTaGACTCCCAAGAGAATGGAGGCTCATCTGGAGAAGGAACTAGAT +
Preference number: 1 (lower is better)
Translates to: WFLRFPRISVHFLCL*TPKRMEAHLEKELD
Trigger: ATCTAGTTCCTTCTCCAGATGAGCCTCCATTCTCTTGGGAGTGCACAAACATAAGAAGTGAACAGAGATTCTTGGAAATCTGAGAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR TCA 90 bp ACCTTAAATTCACAGGGCAGTCGGGTTACAGCCTCTTCAAATAAATaGCAATTTAAAGTTACCTCCTCCAGGCCGTTTATCATTAATCCC +
Preference number: 1 (lower is better)
Translates to: TLNSQGSRVTASSNK*QFKVTSSRPFIINP
Trigger: GGGATTAATGATAAACGGCCTGGAGGAGGTAACTTTAAATTGTCATTTATTTGAAGAGGCTGTAACCCGACTGCCCTGTGAATTTAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 90 bp TTTTATGGAGCTGAAGTGATAGATAACCTCACCAGTCTTCAGATATaGAATGAGGAACTCATGCATAACCTTAAATTCACAGGGCAGTCG +
Preference number: 1 (lower is better)
Translates to: FYGAEVIDNLTSLQI*NEELMHNLKFTGQS
Trigger: CGACTGCCCTGTGAATTTAAGGTTATGCATGAGTTCCTCATTGCATATCTGAAGACTGGTGAGGTTATCTATCACTTCAGCTCCATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 90 bp CAAGAGAATGGAGGCTCATCTGGAGAAGGAACTAGATTAATCTTCTaGTCTACACTTGAGCTCCTGATTATGGTAAGAAACTCGATAAAA +
Preference number: 1 (lower is better)
Translates to: QENGGSSGEGTRLIF*STLELLIMVRNSIK
Trigger: TTTTATCGAGTTTCTTACCATAATCAGGAGCTCAAGTGTAGAGCAGAAGATTAATCTAGTTCCTTCTCCAGATGAGCCTCCATTCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 90 bp AATATATATTATATACACACGTACATATGGACCCATACACATAAGTaGACACACACACACACACAGAATGACAGAAAGGACTGGAATACA +
Preference number: 1 (lower is better)
Translates to: NIYYIHTYIWTHTHK*THTHTQNDRKDWNT
Trigger: TGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCACTTATGTGTATGGGTCCATATGTACGTGTGTATATAATATATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR GCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATCAAGGAGTCCTGAACTaGAACACGGAGCCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDQGVLN*NTEPQE
Trigger: TTCCTGGGGCTCCGTGTTGCAGTTCAGGACTCCTTG...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR GCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGCCAAAGGGAAAGGCTaGCTTGCGTGCACACGTGTG +
Preference number: 2 (lower is better)
Translates to: EPPDEMADLYSGAHLASLAKGKG*LACTRV
Trigger: CACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGC...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATCCTGTGGCAGGAACATaGAGGAGATGTGTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDPVAGT*RRCVCV
Trigger: GACACACACACATCTCCTCCATGTTCCTGCCACAGG...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCGCACATAAGGATGAGTaGGCTGGGAGCAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: KKMVPRLMGISIPALGRLAHKDE*AGSRQG
Trigger: TCCCTGCCTGCTCCCAGCCCACTCATCCTTATGTGC...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR GCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTAGGGAAAGGCTGCCTTaGGTGCACACGTGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWARERLP*VHTCAG
Trigger: CCCAGCACACGTGTGCACGCAAGGCAGCCTTTCCCT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR GCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATAAGATTCGTACCGATTaGATTTGGCTCTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDKIRTD*IWLWLL
Trigger: GAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTT...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGCACTGAACTGGTGCTaGTCCCTCTGTCCAGAGATA +
Preference number: 2 (lower is better)
Translates to: EPPDEMADLYSGAHLASLALNWC*SLCPEI
Trigger: TATCTCTGGACAGAGGGACCAGCACCAGTTCAGTGC...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR TCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTGCTCTGGCTGCTCAGTaGGTTCATCTCTACCCTCCG +
Preference number: 2 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWAALAAQ*VHLYPP
Trigger: CGGAGGGTAGAGATGAACTCACTGAGCAGCCAGAGC...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR TCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTAACAGCCAACAGGTATaGTATGGGGAGTGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: EPPDEMADLYSGAHLASLNSQQV*YGEWSS
Trigger: GGAAGACCACTCCCCATATCATACCTGTTGGCTGTT...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR TCA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCCTGCATACTGTCACATaGAGACTGATAAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKALHTVT*RLIRVG
Trigger: GCCCACCCTTATCAGTCTTCATGTGACAGTATGCAG...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCCTTGGTCAAGCTCTCTaGGGAGAAAGGCAAATGCTC +
Preference number: 2 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKALGQAL*GERQML
Trigger: GAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAG...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGAGCCCCAGGAACTTCTaGAAAGGAGTATCGTGTGTA +
Preference number: 2 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWSPRNF*KGVSCV
Trigger: TACACACGATACTCCTTTCCAGAAGTTCCTGGGGCT...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR TCA 90 bp AATCTAAGGACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATGCTTTGCCAGAACCCACCCAGTTTaGGGGTCTAGCAGGCTAGCA +
Preference number: 2 (lower is better)
Translates to: NLRTRLGAIGPLVCSCFARTHPV*GSSRLA
Trigger: TGCTAGCCTGCTAGACCCTCAAACTGGGTGGGTTCT...GGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR GCA 90 bp GAATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCAGGGAAAGGCTGCCTTaGGTGCACACGTGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: EYVTWSSSLGRKANAHQTRERLP*VHTCAG
Trigger: CCCAGCACACGTGTGCACGCAAGGCAGCCTTTCCCT...GGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGATTGCATTTGGCTCTaGCTGCTCAGTGAGTTCATC +
Preference number: 2 (lower is better)
Translates to: EPPDEMADLYSGAHLASLDCIWL*LLSEFI
Trigger: GATGAACTCACTGAGCAGCCAGAGCCAAATGCAATC...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR TCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCGGGAATGTGGAGTGCTaGGGACTCTTGATTTATCCC +
Preference number: 2 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSGNVEC*GLLIYP
Trigger: GGGATAAATCAAGAGTCCTCAGCACTCCACATTCCC...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR TCA 90 bp ATTAGAGAAGTAGTAGATTATAATGTGCGGGGAGGGGAGACGGACGTGAGCCTGAATTGTTGTGAGGTTTaGATGAGGCAGGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: IREVVDYNVRGGETDVSLNCCEV*MRQGGG
Trigger: TCCCCCACCCTGCCTCATTCAAACCTCACAACAATT...CAGGCTCACGTCCGTCTCCCCTCCCCGCACATTATAATCTACTACTTCTCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR GCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCTTGCGTGCACACGTGTaGTGGGAGACACAAGAAAGA +
Preference number: 2 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSLRAHV*WETQER
Trigger: TCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAA...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR GCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTAAAGGCTGCCTTGCGTaGACACGTGTGCTGGGAGAC +
Preference number: 2 (lower is better)
Translates to: RMTERTGIHALLINVLGTKGCLA*TRVLGD
Trigger: GTCTCCCAGCACACGTGTGCACGCAAGGCAGCCTTT...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR GCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGGCCAAAGGGAAAGGCTaGCTTGCGTGCACACGTGTG +
Preference number: 2 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWAKGKG*LACTRV
Trigger: CACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGC...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR GCA 90 bp CCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGAGATGAGAACCCTGACTTaGCAAACAGATTCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: PPDEMADLYSGAHLASLEMRTLT*QTDSGL
Trigger: CAACCCAGAATCTGTTTGGCAAGTCAGGGTTCTCAT...CTCAAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp ATTAGAGAAGTAGTAGATTATAATGTGCGGGGAGGGGAGACGGACGTGAGCCTGCTTGGCTCCAACAGGTaGCAACTGGAAGGAGATAAG +
Preference number: 2 (lower is better)
Translates to: IREVVDYNVRGGETDVSLLGSNR*QLEGDK
Trigger: CTTATCTCCTTCCAGTTGCCACCTGTTGGAGCCAAG...CAGGCTCACGTCCGTCTCCCCTCCCCGCACATTATAATCTACTACTTCTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGAGTATGGAATCACAGTaGAGGTCTGTTCCCCAAATT +
Preference number: 2 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWSMESQ*RSVPQI
Trigger: AATTTGGGGAACAGACCTCCACTGTGATTCCATACT...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCATCACTGTAACCCTCTaGACCTCACCTTCCTCATCT +
Preference number: 2 (lower is better)
Translates to: KKMVPRLMGISIPALGRLITVTL*TSPSSS
Trigger: AGATGAGGAAGGTGAGGTCCAGAGGGTTACAGTGAT...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGCGTGCACACGTGTGCTaGGAGACACAAGAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKERAHVC*ETQERS
Trigger: ACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACG...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCAATGACAGAAAGGACTaGAATACACGCCCTACTTAT +
Preference number: 2 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCNDRKD*NTRPTY
Trigger: ATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATT...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp ACACAAGATCTCCATCTTCCATGCAGTGAAGAGACCACAGGCTTTGTAAGCAGACGTACCGATTGCATTTaGCTCTGGCTGCTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: TQDLHLPCSEETTGFVSRRTDCI*LWLLSE
Trigger: CTCACTGAGCAGCCAGAGCCAAATGCAATCGGTACG...TCTGCTTACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGGAGATCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCTGGCAGATCAGAAGATaGATCCTTAGAGGAAGTCTA +
Preference number: 2 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKAWQIRR*ILRGSL
Trigger: TAGACTTCCTCTAAGGATCCATCTTCTGATCTGCCA...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCCTAATAGCTCCTCTATaGGTGTTTGCACTGTCTAAC +
Preference number: 2 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKALIAPL*VFALSN
Trigger: GTTAGACAGTGCAAACACCCATAGAGGAGCTATTAG...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR GCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTAAGATTCGTACCGATTaGATTTGGCTCTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWAKIRTD*IWLWLL
Trigger: GAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTAATGACAGAAAGGACTaGAATACACGCCCTACTTAT +
Preference number: 2 (lower is better)
Translates to: EPPDEMADLYSGAHLASLNDRKD*NTRPTY
Trigger: ATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATT...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTCCAGAGATAGGGCCATaGCCTACAGACAAGGTGAAC +
Preference number: 2 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCPEIGP*PTDKVN
Trigger: GTTCACCTTGTCTGTAGGCCATGGCCCTATCTCTGG...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR TCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTAAGGGAAATCCATGCTaGGCTAACCCAGTGTCACCA +
Preference number: 2 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCKGNPC*ANPVSP
Trigger: TGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTT...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR GCA 90 bp GAATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTTGCGTGCACACGTGTaGTGGGAGACACAAGAAAGA +
Preference number: 2 (lower is better)
Translates to: EYVTWSSSLGRKANAHQTLRAHV*WETQER
Trigger: TCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAA...GGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCGTGCACACGTGTGCTaGGAGACACAAGAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWRAHVC*ETQERS
Trigger: ACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACG...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCTTGGTCAAGCTCTCTaGGGAGAAAGGCAAATGCTC +
Preference number: 2 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWLGQAL*GERQML
Trigger: GAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAG...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp TCTGTCCCAAGAGACAGGAAGCATTCCTTTCAGGGAAGGAACCAAATTTCCCTAAGCCCCAGGAACTTCTaGAAAGGAGTATCGTGTGTA +
Preference number: 2 (lower is better)
Translates to: SVPRDRKHSFQGRNQISLSPRNF*KGVSCV
Trigger: TACACACGATACTCCTTTCCAGAAGTTCCTGGGGCT...TAGGGAAATTTGGTTCCTTCCCTGAAAGGAATGCTTCCTGTCTCTTGGGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCAGTATGGAATCACAGTaGAGGTCTGTTCCCCAAATT +
Preference number: 2 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSSMESQ*RSVPQI
Trigger: AATTTGGGGAACAGACCTCCACTGTGATTCCATACT...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CAA 90 bp TTTCTCTTGCTTTGTTCACTAAGTCTCCTGTATGAGAACCCTGACTaGCCAAACAGATTCTGGGTTGCGTCTCTGCCTTCCCTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: FLLLCSLSLLYENPD*PNRFWVASLPSLSF
Trigger: AAAGGAAAGGGAAGGCAGAGACGCAACCCAGAATCTGTTTGGCAAGTCAGGGTTCTCATACAGGAGACTTAGTGAACAAAGCAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTAGAACACATTGCTACTaGCCCTTTCTAGTGGCAATT +
Preference number: 2 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWARTHCY*PFLVAI
Trigger: AATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGCTAGAATATGTAACTTaGTCAAGCTCTCTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKELEYVT*SSSLGR
Trigger: TCTCCCCAGAGAGCTTGACCAAGTTACATATTCTAG...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CCA 90 bp AATCTAAGGACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATGCTTTGCCCTAGAATATGTAACTTaGTCAAGCTCTCTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: NLRTRLGAIGPLVCSCFALEYVT*SSSLGR
Trigger: TCTCCCCAGAGAGCTTGACCAAGTTACATATTCTAG...GGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTACTTATAAACGTGCTTaGCACTCAGGACGATCTCTA +
Preference number: 2 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWATYKRA*HSGRSL
Trigger: TAGAGATCGTCCTGAGTGCCAAGCACGTTTATAAGT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR GCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAAGGGGAGAAAGGCAAATaGTCATCAAACCTCCCCATA +
Preference number: 2 (lower is better)
Translates to: KNHRIREIHAELTQCHHKGEKGK*SSNLPI
Trigger: TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCC...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR GCA 90 bp ATTAGAGAAGTAGTAGATTATAATGTGCGGGGAGGGGAGACGGACGTGAGCCTGGCAATGAGGAACTCATaGATAACCTTAAATTCACAG +
Preference number: 2 (lower is better)
Translates to: IREVVDYNVRGGETDVSLAMRNS*ITLNSQ
Trigger: CTGTGAATTTAAGGTTATGCATGAGTTCCTCATTGC...CAGGCTCACGTCCGTCTCCCCTCCCCGCACATTATAATCTACTACTTCTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTAAACTAATACATTCTTaGCTCCAACAGGTGGCAACT +
Preference number: 2 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWAKLIHS*LQQVAT
Trigger: AGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CAA 90 bp CTCTGGTTTCTCAGATTTCCAAGAATCTCTGTTCACTTCTTATGTTaGTGCACTCCCAAGAGAATGGAGGCTCATCTGGAGAAGGAACTA +
Preference number: 2 (lower is better)
Translates to: LWFLRFPRISVHFLC*CTPKRMEAHLEKEL
Trigger: TAGTTCCTTCTCCAGATGAGCCTCCATTCTCTTGGGAGTGCACAAACATAAGAAGTGAACAGAGATTCTTGGAAATCTGAGAAACCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR TCA 90 bp CTGAAAGGAGAGCTAAACAAACCTCTGTTCTCCAAACACAAGATCTCCATCTTCCACACACACACAGAATaGCAGAAAGGACTGGAATAC +
Preference number: 2 (lower is better)
Translates to: LKGELNKPLFSKHKISIFHTHTE*QKGLEY
Trigger: GTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTG...GAAGATGGAGATCTTGTGTTTGGAGAACAGAGGTTTGTTTAGCTCTCCTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR GCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGGAATTAAGAACACATTaGTACTGGCCCTTTCTAGTG +
Preference number: 2 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWELRTH*YWPFLV
Trigger: CACTAGAAAGGGCCAGTAGCAATGTGTTCTTAATTC...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR GCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTACCAGTCTTCAGATATaGAATGAGGAACTCATGCAT +
Preference number: 2 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCTSLQI*NEELMH
Trigger: ATGCATGAGTTCCTCATTGCATATCTGAAGACTGGT...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR TCA 90 bp TCATCTGGAGAAGGAACTAGATTAATCTTCTGCTCTACACTTGAGCTCCTGATTAAAATTATTGAGGTCTaGTCAGCTGCCAACCTCATC +
Preference number: 2 (lower is better)
Translates to: SSGEGTRLIFCSTLELLIKIIEV*SAANLI
Trigger: GATGAGGTTGGCAGCTGATCAGACCTCAATAATTTT...AATCAGGAGCTCAAGTGTAGAGCAGAAGATTAATCTAGTTCCTTCTCCAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATCCAACAGGTGGCAACTaGAAGGAGATAAGTCATTAC +
Preference number: 2 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYPTGGN*KEISHY
Trigger: GTAATGACTTATCTCCTTCCAGTTGCCACCTGTTGG...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CAA 90 bp CCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGAGCTTGGCCAATGCCTCTaGGCCCAATTCCCTCTAGGT +
Preference number: 3 (lower is better)
Translates to: PPDEMADLYSGAHLASLELGQCL*AQFPLG
Trigger: ACCTAGAGGGAATTGGGCCAAGAGGCATTGGCCAAG...CTCAAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 72 bp AGTCTCCTGGGGAGAATGATAACCCCTTTGGTACGCTaGAGACATGAGGACCCTACATCAGGAGGTCCTAGC +
Preference number: 3 (lower is better)
Translates to: SLLGRMITPLVR*RHEDPTSGGPS
Trigger: GCTAGGACCTCCTGATGTAGGGTCCTCATGTCTGCAGCGTACCAAAGGGGTTATCATTCTCCCCAGGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 72 bp AGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTaGGCTGGGAGCAGGCAGGGACAGGTTGGGTGGGTA +
Preference number: 3 (lower is better)
Translates to: RTLDLSLAHKDE*AGSRQGQVGWV
Trigger: TACCCACCCAACCTGTCCCTGCCTGCTCCCAGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR TCA 72 bp GCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATaGTATGGGGAGTGGTCTTCCATGTACAAAGCTTCT +
Preference number: 3 (lower is better)
Translates to: APTGQAINSQQV*YGEWSSMYKAS
Trigger: AGAAGCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 72 bp GGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTaGATTTGGCTCTGGCTGCTCAGTGAGTTCATCTCT +
Preference number: 3 (lower is better)
Translates to: GLPLLPSKIRTD*IWLWLLSEFIS
Trigger: AGAGATGAACTCACTGAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 72 bp AACACCCCAATATTTCCCAGCCACAACTGCCCCAACTaGGCAGGCCATCAACAGCCAACAGGTATGATATGG +
Preference number: 3 (lower is better)
Translates to: NTPIFPSHNCPN*AGHQQPTGMIW
Trigger: CCATATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGAAATATTGGGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CAA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATTCTAGAATATGTAACTaGGTCAAGCTCTCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDSRICN*VKLSGE
Trigger: CTCCCCAGAGAGCTTGACCAAGTTACATATTCTAGA...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CAA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGGACACAAGAAAGAAGTaGATCCATGGCTTCAGCGTA +
Preference number: 3 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWDTRKK*IHGFSV
Trigger: TACGCTGAAGCCATGGATCAACTTCTTTCTTGTGTC...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR TCA 72 bp CGGATACCTCCTAAGAGAAAAAGATGGTTCCCAGGCTaGTGGGCATTTCCATTCCTGCCCTTGGTAGGCTCA +
Preference number: 3 (lower is better)
Translates to: RIPPKRKRWFPG*WAFPFLPLVGS
Trigger: TGAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTTCTCTTAGGAGGTATCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 72 bp CTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTaGCTGCTCAGTGAGTTCATCTCTACCCTCCGCCTC +
Preference number: 3 (lower is better)
Translates to: LPSKIRTDCIWL*LLSEFISTLRL
Trigger: GAGGCGGAGGGTAGAGATGAACTCACTGAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 72 bp TGGGCATTTCCATTCCTGCCCTTGGTAGGCTCACAGTaGTTTGTGGGAGTAACCAAGGCCAGAGAGAAATCT +
Preference number: 3 (lower is better)
Translates to: WAFPFLPLVGSQ*FVGVTKAREKS
Trigger: AGATTTCTCTCTGGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAATGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CAA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTTATGAGAACCCTGACTaGCCAAACAGATTCTGGGTT +
Preference number: 3 (lower is better)
Translates to: EPPDEMADLYSGAHLASLYENPD*PNRFWV
Trigger: AACCCAGAATCTGTTTGGCAAGTCAGGGTTCTCATA...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 72 bp CACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTaGACACGTGTGCTGGGAGACACAAGAAAGAAGTTG +
Preference number: 3 (lower is better)
Translates to: HIYLAKGKGCLA*TRVLGDTRKKL
Trigger: CAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR GCA 72 bp TCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTaGGTGCACACGTGTGCTGGGAGACACAAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: SPHLSSQRERLP*VHTCAGRHKKE
Trigger: TTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR GCA 72 bp CAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTaGCTTGCGTGCACACGTGTGCTGGGAGACACAAGA +
Preference number: 3 (lower is better)
Translates to: QFHHIYLAKGKG*LACTRVLGDTR
Trigger: TCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR GCA 72 bp ATTATTAAGAACACCCCAATATTTCCCAGCCACAACTaGCCCAACTGGGCAGGCCATCAACAGCCAACAGGT +
Preference number: 3 (lower is better)
Translates to: IIKNTPIFPSHN*PNWAGHQQPTG
Trigger: ACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGAAATATTGGGGTGTTCTTAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 72 bp ACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATaGTTTGCCTCTGAGAAACCCTGTAGACCCCACATT +
Preference number: 3 (lower is better)
Translates to: TRLGAIGPLVCS*FASEKPCRPHI
Trigger: AATGTGGGGTCTACAGGGTTTCTCAGAGGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 72 bp GAAGGAGATAAGTCATTACTTAAGGAAGGGGCCCTGTaGCAGGAACATGGAGGAGATGTGTGTGTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: EGDKSLLKEGAL*QEHGGDVCVSS
Trigger: AGAGGACACACACACATCTCCTCCATGTTCCTGCCACAGGGCCCCTTCCTTAAGTAATGACTTATCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CAA 90 bp TCATCTGGAGAAGGAACTAGATTAATCTTCTGCTCTACACTTGAGCTCCTGATTTCAGATACTGAAGGCTaGGGTCCCTCCCTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: SSGEGTRLIFCSTLELLISDTEG*GPSLPP
Trigger: GGGAGGCAGGGAGGGACCCAAGCCTTCAGTATCTGA...AATCAGGAGCTCAAGTGTAGAGCAGAAGATTAATCTAGTTCCTTCTCCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR TCA 72 bp CAGTCACCAACCCTGTCACCCTTCGCGTCTACTACATaGAGCATGGGCACAAGAACAACAACCTGGAATTTA +
Preference number: 3 (lower is better)
Translates to: QSPTLSPFASTT*SMGTRTTTWNL
Trigger: TAAATTCCAGGTTGTTGTTCTTGTGCCCATGCTTCATGTAGTAGACGCGAAGGGTGACAGGGTTGGTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CAA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTGACACAAGAAAGAAGTaGATCCATGGCTTCAGCGTA +
Preference number: 3 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWADTRKK*IHGFSV
Trigger: TACGCTGAAGCCATGGATCAACTTCTTTCTTGTGTC...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR TCA 72 bp CTAGTGGAGTTAGCTATGTCCACCATGGCCTTAGCCTaGAAAATATGGGCATTTAAGACTTCAGCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: LVELAMSTMALA*KIWAFKTSAGH
Trigger: GTGGCCTGCTGAAGTCTTAAATGCCCATATTTTTCAGGCTAAGGCCATGGTGGACATAGCTAACTCCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 72 bp GCTTGGCACTCAGGACGATCTCTAGAATATGTAACTTaGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCAT +
Preference number: 3 (lower is better)
Translates to: AWHSGRSLEYVT*SSSLGRKANAH
Trigger: ATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTCTAGAGATCGTCCTGAGTGCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 72 bp TGCACACACACACACACACAGAATGACAGAAAGGACTaGAATACACGCCCTACTTATAAACGTGCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: CTHTHTQNDRKD*NTRPTYKRAWH
Trigger: GTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR CCA 72 bp CAACTCAACCCAAGTAAAGGCCTAATAGCTCCTCTATaGGTGTTTGCACTGTCTAACAAAGAACTGGACCCT +
Preference number: 3 (lower is better)
Translates to: QLNPSKGLIAPL*VFALSNKELDP
Trigger: AGGGTCCAGTTCTTTGTTAGACAGTGCAAACACCCATAGAGGAGCTATTAGGCCTTTACTTGGGTTGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CAA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGTCTAGAATATGTAACTaGGTCAAGCTCTCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWSRICN*VKLSGE
Trigger: CTCCCCAGAGAGCTTGACCAAGTTACATATTCTAGA...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR GCA 72 bp ACCTCACCAGTCTTCAGATATGCAATGAGGAACTCATaGATAACCTTAAATTCACAGGGCAGTCGGGTTACA +
Preference number: 3 (lower is better)
Translates to: TSPVFRYAMRNS*ITLNSQGSRVT
Trigger: TGTAACCCGACTGCCCTGTGAATTTAAGGTTATGCATGAGTTCCTCATTGCATATCTGAAGACTGGTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CCA 72 bp AAGGACTGGAATACACGCCCTACTTATAAACGTGCTTaGCACTCAGGACGATCTCTAGAATATGTAACTTGG +
Preference number: 3 (lower is better)
Translates to: KDWNTRPTYKRA*HSGRSLEYVTW
Trigger: CCAAGTTACATATTCTAGAGATCGTCCTGAGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CAA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCGGAATTAAGAACACATaGCTACTGGCCCTTTCTAGT +
Preference number: 3 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLGIKNT*LLALSS
Trigger: ACTAGAAAGGGCCAGTAGCAATGTGTTCTTAATTCC...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CAA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTTTAATAAGGCACAGTTaGATAGCAGATGCTAGGAAT +
Preference number: 3 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWALIRHS*IADARN
Trigger: ATTCCTAGCATCTGCTATCAAACTGTGCCTTATTAA...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
3UTR-3UTR CAA 90 bp AATCTAAGGACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATGCTTTGCCTTAATAAGGCACAGTTaGATAGCAGATGCTAGGAAT +
Preference number: 3 (lower is better)
Translates to: NLRTRLGAIGPLVCSCFALIRHS*IADARN
Trigger: ATTCCTAGCATCTGCTATCAAACTGTGCCTTATTAA...GGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR-3UTR CAA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATAGTTCCTGGGATTTTTaGGGAATGTGGAGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYSSWDF*GMWSAE
Trigger: CTCAGCACTCCACATTCCCAAAAAATCCCAGGAACT...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 72 bp GCTGAAGTGATAGATAACCTCACCAGTCTTCAGATATaGAATGAGGAACTCATGCATAACCTTAAATTCACA +
Preference number: 3 (lower is better)
Translates to: AEVIDNLTSLQI*NEELMHNLKFT
Trigger: TGTGAATTTAAGGTTATGCATGAGTTCCTCATTGCATATCTGAAGACTGGTGAGGTTATCTATCACTTCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR GCA 72 bp AAGATCCTAGTCTTCTCTGTAGTCAATTATGAACAGTaGAGTCTAGAACACTTGATATTCACAAGTGTTGTG +
Preference number: 3 (lower is better)
Translates to: KILVFSVVNYEQ*SLEHLIFTSVV
Trigger: CACAACACTTGTGAATATCAAGTGTTCTAGACTGCACTGTTCATAATTGACTACAGAGAAGACTAGGATCTT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTATGCGACCTGCGCGGCTaGCTCAGCCAGGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLCDLRG*LSQAPR
Trigger: GCGAGGAGCCTGGCTGAGGCAGCCGCGCAGGTCGCA...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTAAGAAGCAAGGAGTCCTaGACTGCAACACGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLRSKES*TATRSP
Trigger: GGGGCTCCGTGTTGCAGTTCAGGACTCCTTGCTTCT...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp CCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGAGGTGGGCCTCCGAGGCTaGGGATGCTGGGGCACCCTT +
Preference number: 4 (lower is better)
Translates to: PPDEMADLYSGAHLASLEVGLRG*GCWGTL
Trigger: AAGGGTGCCCCAGCATCCTCAGCCTCGGAGGCCCAC...CTCAAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTAATGCTGAAGGCCCTCTaGGTCCTCATGCGTGACACC +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLMLKAL*VLMRDT
Trigger: GGTGTCACGCATGAGGACCCAGAGGGCCTTCAGCAT...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTAGCACATCTCAAGCACTaGACTGGTGCTGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLAHLKH*TGAGPS
Trigger: AGAGGGACCAGCACCAGTTCAGTGCTTGAGATGTGC...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGGTGGCTCAGGGCACTaGCCTTTGGAGCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EPPDEMADLYSGAHLASLGGSGH*PLERAP
Trigger: GGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACC...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATCAGGGCACTGCCCTTTaGAGCGTGCTCCCATGTTGC +
Preference number: 4 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDQGTAL*SVLPCC
Trigger: GCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTG...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ACACAAGATCTCCATCTTCCATGCAGTGAAGAGACCACAGGCTTTGTAAGCAGAGCTGGCCCTGCGACCTaGGCGGCTGCCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TQDLHLPCSEETTGFVSRAGPAT*AAASAR
Trigger: CCTGGCTGAGGCAGCCGCGCAGGTCGCAGGGCCAGC...TCTGCTTACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGGAGATCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTAAAAATCTCTCCGAACTaGCGCTCTCTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLKISPN*RSLPGG
Trigger: TCCTCCCGGAAGAGAGCGGCAGTTCGGAGAGATTTT...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGCTCATCGAAGGGATCTaGGTGGCCGTTCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQLIEGI*VAVHLG
Trigger: CCCCAGGTGAACGGCCACCCAGATCCCTTCGATGAG...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTACGTACCGATTGCATTTaGCTCTGGCTGCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLRTDCI*LWLLSE
Trigger: CTCACTGAGCAGCCAGAGCCAAATGCAATCGGTACG...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGGCTGGCCCTGCGACCTaGGCGGCTGCCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWAGPAT*AAASAR
Trigger: CCTGGCTGAGGCAGCCGCGCAGGTCGCAGGGCCAGC...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCGGCCAGCTCAAGAACTaGAAGTGGGTCACCTGGCGT +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCGQLKN*KWVTWR
Trigger: ACGCCAGGTGACCCACTTCCAGTTCTTGAGCTGGCC...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCCACAACTGCCCCAACTaGGCAGGCCATCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCHNCPN*AGHQQP
Trigger: TGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTG...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTAAGCCCCCAGATGAAATaGCTGACCTTTACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLSPQMK*LTFTQV
Trigger: CACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCT...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTATGGCGAGATCAATTTTaGCGTACCCACCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLWRDQF*RTHPGF
Trigger: AAAACCTGGGTGGGTACGTCAAAATTGATCTCGCCA...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCAGGCAGATGTCCAGTaGGCAGAAGGTACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWQADVQ*AEGTCP
Trigger: AGGACAGGTACCTTCTGCTCACTGGACATCTGCCTG...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGGGTCCTCATGCGTaGCACCGTCTGGAACACATT +
Preference number: 4 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWLGPHA*HRLEHI
Trigger: AATGTGTTCCAGACGGTGTCACGCATGAGGACCCAG...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGGCTCTGGCTGCTCAGTaGGTTCATCTCTACCCTCCG +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWALAAQ*VHLYPP
Trigger: CGGAGGGTAGAGATGAACTCACTGAGCAGCCAGAGC...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTGGTGGCTCAGGGCACTaGCCTTTGGAGCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWAGGSGH*PLERAP
Trigger: GGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACC...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGGGCCAGAGGATACCATaGCCTCCTTCTCTGCGAACT +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQGQRIP*PPSLRT
Trigger: AGTTCGCAGAGAAGGAGGGCATGGTATCCTCTGGCC...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTATGGATGGTCATAGCATaGGGACCTGGAACATGTACT +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLWMVIA*GPGTCT
Trigger: AGTACATGTTCCAGGTCCCCATGCTATGACCATCCA...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCAAGGAAGGGGCCCTGTaGCAGGAACATGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCKEGAL*QEHGGD
Trigger: ATCTCCTCCATGTTCCTGCCACAGGGCCCCTTCCTT...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGGCACATAAGGATGAGTaGGCTGGGAGCAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWAHKDE*AGSRQG
Trigger: TCCCTGCCTGCTCCCAGCCCACTCATCCTTATGTGC...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGCAGGCTAGAGTGCAATaGCGCGATCTCGGCTCATTG +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQQARVQ*RDLGSL
Trigger: CAATGAGCCGAGATCGCGCCATTGCACTCTAGCCTG...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCAGAAGCAAGGAGTCCTaGACTGCAACACGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFRSKES*TATRSP
Trigger: GGGGCTCCGTGTTGCAGTTCAGGACTCCTTGCTTCT...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCGTTGTGAGGTTTGAATaGGGCAGGGTGGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCVVRFE*GRVGEK
Trigger: CTTTTCCCCCACCCTGCCTCATTCAAACCTCACAAC...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATTTGTTGAGACTGCAGTaGGCCATGATCATGCCACTC +
Preference number: 4 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDLLRLQ*AMIMPL
Trigger: GAGTGGCATGATCATGGCTCACTGCAGTCTCAACAA...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGTCCCTGGGCAGATGCTaGGTGACCTCAGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQSLGRC*VTSDVF
Trigger: AAAGACATCTGAGGTCACGCAGCATCTGCCCAGGGA...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTAATCACCAAGACTTTTTaGTCCCATACCATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLITKTF*SHTMSQ
Trigger: CTGGCTCATGGTATGGGAGCAAAAAGTCTTGGTGAT...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCCTCACAGCCAGACTCTaGTGGTTTCTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCLTARL*WFLTTL
Trigger: GAGAGTGGTCAGAAACCAGCAGAGTCTGGCTGTGAG...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCAAAGGCTGCCTTGCGTaGACACGTGTGCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFKGCLA*TRVLGD
Trigger: GTCTCCCAGCACACGTGTGCACGCAAGGCAGCCTTT...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATATGCGTGACACCGTCTaGAACACATTAAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDMRDTV*NTLRVP
Trigger: TGGCACCCTTAATGTGTTCCAGACGGTGTCACGCAT...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCACTGACTTGTGGGGATaGTGCAACCTGGCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCTDLWG*CNLAVK
Trigger: CTTTACTGCCAGGTTGCATCATCCCCACAAGTCAGT...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCCTAGATTGGTCACTGTaGGGAAGCCAAATCGGATCC +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCLDWSL*GSQIGS
Trigger: GGATCCGATTTGGCTTCCTCACAGTGACCAATCTAG...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp ACACAAGATCTCCATCTTCCATGCAGTGAAGAGACCACAGGCTTTGTAAGCAGACAGGGGTCTGGATGCTaGAGGCCCTCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TQDLHLPCSEETTGFVSRQGSGC*RPSGSS
Trigger: TGAGGACCCAGAGGGCCTTCAGCATCCAGACCCCTG...TCTGCTTACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGGAGATCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACGCTCTGGCTGCTCAGTaGGTTCATCTCTACCCTCCG +
Preference number: 4 (lower is better)
Translates to: VAISPHLSSQRERLPCVHALAAQ*VHLYPP
Trigger: CGGAGGGTAGAGATGAACTCACTGAGCAGCCAGAGC...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCGGGAATGTGGAGTGCTaGGGACTCTTGATTTATCCC +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCGNVEC*GLLIYP
Trigger: GGGATAAATCAAGAGTCCTCAGCACTCCACATTCCC...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGGGGAATGTGGAGTGCTaGGGACTCTTGATTTATCCC +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQGNVEC*GLLIYP
Trigger: GGGATAAATCAAGAGTCCTCAGCACTCCACATTCCC...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGTTCCACCAAACCCCTaGCCTCTCTGGTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: EPPDEMADLYSGAHLASLVPPNP*PLWFLR
Trigger: TCTGAGAAACCAGAGAGGTCAGGGGTTTGGTGGAAC...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGCTGCATACTGTCACATaGAGACTGATAAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQLHTVT*RLIRVG
Trigger: GCCCACCCTTATCAGTCTTCATGTGACAGTATGCAG...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTGGCCACACTTTCTCCTaGCGCCTTCCTCAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTGHTFS*RLPQSG
Trigger: CCCGCTTTGAGGAAGGCGGCAGGAGAAAGTGTGGCC...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGTGTCCTGCCAATGCCTaGACTGCAATGGACCACAAT +
Preference number: 4 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWCPANA*TAMDHN
Trigger: ATTGTGGTCCATTGCAGTGCAGGCATTGGCAGGACA...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACCCCTCTGGGTCCTCATaGGTGACACCGTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: VAISPHLSSQRERLPCVHPSGSS*VTPSGT
Trigger: TGTTCCAGACGGTGTCACGCATGAGGACCCAGAGGG...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGTTGCGTGCACACGTGTaGTGGGAGACACAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQLRAHV*WETQER
Trigger: TCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAA...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTGCTTGGGTCCCTCCCTaGCTCCCTCATCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCAWVPP*LPHPSQ
Trigger: CTGGGAGGGATGAGGGAGGCAGGGAGGGACCCAAGC...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTCAAGAACTGGAAGTaGGTCACCTGGCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWLKNWK*VTWRFC
Trigger: GCAGAAACGCCAGGTGACCCACTTCCAGTTCTTGAG...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTCAGGGCACTGCCCTTTaGAGCGTGCTCCCATGTTGC +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTQGTAL*SVLPCC
Trigger: GCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTG...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCATGCTGAAGGCCCTCTaGGTCCTCATGCGTGACACC +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSMLKAL*VLMRDT
Trigger: GGTGTCACGCATGAGGACCCAGAGGGCCTTCAGCAT...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTACTAGAATATGTAACTTaGTCAAGCTCTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: MAGERRREVPSPLTSGTLLEYVT*SSSLGR
Trigger: TCTCCCCAGAGAGCTTGACCAAGTTACATATTCTAG...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ACACAAGATCTCCATCTTCCATGCAGTGAAGAGACCACAGGCTTTGTAAGCAGATCCCAGACCAGCTCCTaGACCCCCTCCCTCATGTCC +
Preference number: 4 (lower is better)
Translates to: TQDLHLPCSEETTGFVSRSQTSS*TPSLMS
Trigger: GGACATGAGGGAGGGGGTCCAGGAGCTGGTCTGGGA...TCTGCTTACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGGAGATCTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGTACCACATGTTGGACTaGCTTGTGGGGATGATGCAA +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQYHMLD*LVGMMQ
Trigger: TTGCATCATCCCCACAAGTCAGTCCAACATGTGGTA...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCGGAGGGAGAACAGGATaGTCTCATCGAAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: KKMVPRLMGISIPALGRLGGRTG*SHRRDL
Trigger: CAGATCCCTTCGATGAGATCATCCTGTTCTCCCTCC...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCGACTCTGCTGGTTTCTaGCCACTCTCAAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCDSAGF*PLSRSQ
Trigger: TTGACTTCTTGAGAGTGGTCAGAAACCAGCAGAGTC...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCGTAGGGGACAAACAGTaGTTGCAGGGGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSVGDKQ*LQGTTS
Trigger: TGAGGTGGTCCCCTGCAATCACTGTTTGTCCCCTAC...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTCCATCTTCCATGCAGTaGAGAGACCACAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: EPPDEMADLYSGAHLASLPSSMQ*RDHRLC
Trigger: ACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGG...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTCCTCCCAGATTCAAGTaGTTCTCCCATTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EPPDEMADLYSGAHLASLPPRFK*FSHFSL
Trigger: GAGGCTGAAATGGGAGAATCACTTGAATCTGGGAGG...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ACACAAGATCTCCATCTTCCATGCAGTGAAGAGACCACAGGCTTTGTAAGCAGACGTGAGCCTGGAGTCTaGGAGGGGCACTGTACCGTT +
Preference number: 4 (lower is better)
Translates to: TQDLHLPCSEETTGFVSRREPGV*EGHCTV
Trigger: AACGGTACAGTGCCCCTCTCAGACTCCAGGCTCACG...TCTGCTTACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGGAGATCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp CTGAAAGGAGAGCTAAACAAACCTCTGTTCTCCAAACACAAGATCTCCATCTTCGAGGGGAGACGGACGTaGGCCTGGAGTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LKGELNKPLFSKHKISIFEGRRT*AWSLRG
Trigger: CCCTCTCAGACTCCAGGCTCACGTCCGTCTCCCCTC...GAAGATGGAGATCTTGTGTTTGGAGAACAGAGGTTTGTTTAGCTCTCCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTGGGGAAGAAAAAGTaGAGGCGAAGAGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWLGKKK*RRRANS
Trigger: GCTGTTAGCTCTTCGCCTGCACTTTTTCTTCCCCAG...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCCTCACAGCCAGACTCTaGTGGTTTCTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFLTARL*WFLTTL
Trigger: GAGAGTGGTCAGAAACCAGCAGAGTCTGGCTGTGAG...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTCTGCCCTTTGGAGCGTaGTCCCATGTTGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWALPFGA*SHVAHS
Trigger: GCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAG...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTCTGCCCTTTGGAGCGTaGTCCCATGTTGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTLPFGA*SHVAHS
Trigger: GCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAG...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp ATTAGAGAAGTAGTAGATTATAATGTGCGGGGAGGGGAGACGGACGTGAGCCTGCATGCCCTCCTTCTCTaGGAACTCCAGGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: IREVVDYNVRGGETDVSLHALLL*ELQDGL
Trigger: AAGGCCATCCTGGAGTTCGCAGAGAAGGAGGGCATG...CAGGCTCACGTCCGTCTCCCCTCCCCGCACATTATAATCTACTACTTCTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGGGGGAGAAAGGCAAATaGTCATCAAACCTCCCCATA +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQGEKGK*SSNLPI
Trigger: TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCC...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AATCTAAGGACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATGCTTTGCCTTTCCCAGCCACAACTaGCCCAACTGGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: NLRTRLGAIGPLVCSCFAFPSHN*PNWAGH
Trigger: ATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGAAA...GGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGCTTCTTCAAACGAGCTaGAAATGCTCCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQLLQTS*KCSLQQ
Trigger: CTGCTGAAGGGAGCATTTCCAGCTCGTTTGAAGAAG...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACTGGAAGTGGGTCACCTaGCGTTTCTGCCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VAISPHLSSQRERLPCVHWKWVT*RFCRSS
Trigger: AGAGGAACGGCAGAAACGCCAGGTGACCCACTTCCA...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATATACTGCTCAGGGGTCTaGATGCTGAAGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPIYCSGV*MLKALW
Trigger: CCAGAGGGCCTTCAGCATCCAGACCCCTGAGCAGTA...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATCTGCGAACTCCAGGATaGCCTTGTAGCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDLRTPG*PCSKNS
Trigger: ACTATTTTTGCTACAAGGCCATCCTGGAGTTCGCAG...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTACGGCCAGCAGGTTTTaGCCAGAGGATACCATGCCC +
Preference number: 4 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWATASRF*PEDTMP
Trigger: GGGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCAGCCCCAGGAACTTCTaGAAAGGAGTATCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCSPRNF*KGVSCV
Trigger: TACACACGATACTCCTTTCCAGAAGTTCCTGGGGCT...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGCAGATACTGAAGGCTTaGGTCCCTCCCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKEQILKA*VPPCLP
Trigger: AGGGAGGCAGGGAGGGACCCAAGCCTTCAGTATCTG...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGACTCTGAACAGTGCCTaGAATAGAGTGAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQTLNSA*NRVSIQ
Trigger: CTGGATGCTCACTCTATTCCAGGCACTGTTCAGAGT...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp CCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGAGTTGCCAAACAGATTCTaGGTTGCGTCTCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPDEMADLYSGAHLASLELPNRF*VASLPS
Trigger: GGAAGGCAGAGACGCAACCCAGAATCTGTTTGGCAA...CTCAAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCAGCCTCCCGAGTAGCTaGGATTACAAGCACATACCA +
Preference number: 4 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKASLPSS*DYKHIP
Trigger: TGGTATGTGCTTGTAATCCCAGCTACTCGGGAGGCT...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGAGGGAACCTAGGACTTaGGTTTGGTTCAGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQREPRT*VWFSGK
Trigger: CTTACCACTGAACCAAACCCAAGTCCTAGGTTCCCT...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCCGAAGAGGTTCCTCATaGGGTTTCAGCTTTACAATG +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCRRGSS*GFSFTM
Trigger: CATTGTAAAGCTGAAACCTCATGAGGAACCTCTTCG...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTTGGGCAGATGCTGCGTaGCCTCAGATGTCTTTAATA +
Preference number: 4 (lower is better)
Translates to: EPPDEMADLYSGAHLASLWADAA*PQMSLI
Trigger: TATTAAAGACATCTGAGGTCACGCAGCATCTGCCCA...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACGGAGGGAGAACAGGATaGTCTCATCGAAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: VAISPHLSSQRERLPCVHGGRTG*SHRRDL
Trigger: CAGATCCCTTCGATGAGATCATCCTGTTCTCCCTCC...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCTTTGCTCCCATACCATaGGCCAGAAATCACGATAGG +
Preference number: 4 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKAFAPIP*ARNHDR
Trigger: CCTATCGTGATTTCTGGCTCATGGTATGGGAGCAAA...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCAAAGCGGGTGGTCATaGCAATCACCAAGACTTTTT +
Preference number: 4 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWQSGWS*QSPRLF
Trigger: AAAAAGTCTTGGTGATTGTCATGACCACCCGCTTTG...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCCTCTCAAGAAGTCAATaGGGGAAGCTGCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KKMVPRLMGISIPALGRLLSRSQ*GKLLRK
Trigger: CTTCCTCAGCAGCTTCCCTCATTGACTTCTTGAGAG...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTCAGGCAGATGTCCAGTaGGCAGAAGGTACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTQADVQ*AEGTCP
Trigger: AGGACAGGTACCTTCTGCTCACTGGACATCTGCCTG...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTCTGGGTCCTCATGCGTaGCACCGTCTGGAACACATT +
Preference number: 4 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWALGPHA*HRLEHI
Trigger: AATGTGTTCCAGACGGTGTCACGCATGAGGACCCAG...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTAGAACCCACCCAGTTTaGGGGTCTAGCAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWARTHPV*GSSRLA
Trigger: TGCTAGCCTGCTAGACCCTCAAACTGGGTGGGTTCT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp CCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGAGTTCGCGTCTACTACATaGAGCATGGGCACAAGAACA +
Preference number: 4 (lower is better)
Translates to: PPDEMADLYSGAHLASLEFASTT*SMGTRT
Trigger: TGTTCTTGTGCCCATGCTTCATGTAGTAGACGCGAA...CTCAAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTGGCTGGTCTTGGAGATaGCAGAGACCTGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTGWSWR*QRPDLL
Trigger: AAGCAGGTCAGGTCTCTGTCATCTCCAAGACCAGCC...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATCCAAAGGACCTTGTGTaGCAATGTAAGCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDPKDLV*QCKHSS
Trigger: AGAAGAATGCTTACATTGGCACACAAGGTCCTTTGG...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCGGCCACACTTTCTCCTaGCGCCTTCCTCAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLGHTFS*RLPQSG
Trigger: CCCGCTTTGAGGAAGGCGGCAGGAGAAAGTGTGGCC...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTCATGCCCTCCTTCTCTaGGAACTCCAGGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTHALLL*ELQDGL
Trigger: AAGGCCATCCTGGAGTTCGCAGAGAAGGAGGGCATG...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTAGGGAAAGGCTGCCTTaGGTGCACACGTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTRERLP*VHTCAG
Trigger: CCCAGCACACGTGTGCACGCAAGGCAGCCTTTCCCT...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGCAAGGAGTCCTGAACTaGAACACGGAGCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKEQGVLN*NTEPQE
Trigger: TTCCTGGGGCTCCGTGTTGCAGTTCAGGACTCCTTG...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AATCTAAGGACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATGCTTTGCCCAAGCACTGAACTGGTaGTGGTCCCTCTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NLRTRLGAIGPLVCSCFAQALNW*WSLCPE
Trigger: CTCTGGACAGAGGGACCAGCACCAGTTCAGTGCTTG...GGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGATGAGAACCCTGACTTaGCAAACAGATTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQMRTLT*QTDSGL
Trigger: CAACCCAGAATCTGTTTGGCAAGTCAGGGTTCTCAT...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGTTTCTACTTGGCCAATaGCTCTTGGCCCAATTCCCT +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWFLLGQ*LLAQFP
Trigger: AGGGAATTGGGCCAAGAGGCATTGGCCAAGTAGAAA...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATAGGGTGGCCGTTCACCTaGGGTAGGAACTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPIGWPFT*GRNWKF
Trigger: GAATTTCCAGTTCCTACCCCAGGTGAACGGCCACCC...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCTCGAAGGGATCTGGGTaGCCGTTCACCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLSKGSG*PFTWGR
Trigger: CCTACCCCAGGTGAACGGCCACCCAGATCCCTTCGA...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGGGTTTCCTGGAGACATaGAACAGTGGAAAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWGFLET*NSGKCQ
Trigger: TTGGCACTTTCCACTGTTCCATGTCTCCAGGAAACC...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AATCTAAGGACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATGCTTTGCCTGGAAGTGGGTCACCTaGCGTTTCTGCCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NLRTRLGAIGPLVCSCFAWKWVT*RFCRSS
Trigger: AGAGGAACGGCAGAAACGCCAGGTGACCCACTTCCA...GGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp ACACAAGATCTCCATCTTCCATGCAGTGAAGAGACCACAGGCTTTGTAAGCAGATACTGCTCAGGGGTCTaGATGCTGAAGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TQDLHLPCSEETTGFVSRYCSGV*MLKALW
Trigger: CCAGAGGGCCTTCAGCATCCAGACCCCTGAGCAGTA...TCTGCTTACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGGAGATCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCCGTGCACACGTGTGCTaGGAGACACAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFRAHVC*ETQERS
Trigger: ACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACG...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp TCTGTCCCAAGAGACAGGAAGCATTCCTTTCAGGGAAGGAACCAAATTTCCCTAGCACATAAGGATGAGTaGGCTGGGAGCAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SVPRDRKHSFQGRNQISLAHKDE*AGSRQG
Trigger: TCCCTGCCTGCTCCCAGCCCACTCATCCTTATGTGC...TAGGGAAATTTGGTTCCTTCCCTGAAAGGAATGCTTCCTGTCTCTTGGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp ATTAGAGAAGTAGTAGATTATAATGTGCGGGGAGGGGAGACGGACGTGAGCCTGCCAGAGATAGGGCCATaGCCTACAGACAAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IREVVDYNVRGGETDVSLPEIGP*PTDKVN
Trigger: GTTCACCTTGTCTGTAGGCCATGGCCCTATCTCTGG...CAGGCTCACGTCCGTCTCCCCTCCCCGCACATTATAATCTACTACTTCTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGTCACTAACAACCTACTaGATGGGCCCAGAAATCAGC +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWSLTTY*MGPEIS
Trigger: GCTGATTTCTGGGCCCATCCAGTAGGTTGTTAGTGA...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGAGAAGCTTTTCTACTTaGCCAATGCCTCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWRSFST*PMPLGP
Trigger: TGGGCCAAGAGGCATTGGCCAAGTAGAAAAGCTTCT...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CAA 72 bp GCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTaGATCCATGGCTTCAGCGTAACTGATGGCAACCTA +
Preference number: 4 (lower is better)
Translates to: ACTRVLGDTRKK*IHGFSVTDGNL
Trigger: TAGGTTGCCATCAGTTACGCTGAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGGGGGAAACATTGTACTaGACTGTCCACTTGTTAATC +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQGETLY*TVHLLI
Trigger: GATTAACAAGTGGACAGTTCAGTACAATGTTTCCCC...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATGATGTCTTTAATATTTaGATCCTCTCCCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDDVFNI*ILSRTL
Trigger: CAAAGTCCGGGAGAGGATTCAAATATTAAAGACATC...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCCAAAGCGGGTGGTCATaGCAATCACCAAGACTTTTT +
Preference number: 4 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKAQSGWS*QSPRLF
Trigger: AAAAAGTCTTGGTGATTGTCATGACCACCCGCTTTG...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACAAGGGAAATCCATGCTaGGCTAACCCAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: VAISPHLSSQRERLPCVHKGNPC*ANPVSP
Trigger: TGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTT...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCCTCACTGAATTGTTGTaGGGTTTGAATGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KKMVPRLMGISIPALGRLLTELL*GLNEAG
Trigger: CCCTGCCTCATTCAAACCTCACAACAATTCAGTGAG...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCGGTACGCTGCAGACATaGGGACCCTACATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLGTLQT*GPYIRR
Trigger: CCTCCTGATGTAGGGTCCTCATGTCTGCAGCGTACC...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCACCATGGCCTTAGCCTaGAAAATATGGGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCTMALA*KIWAFK
Trigger: CTTAAATGCCCATATTTTTCAGGCTAAGGCCATGGT...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCATCTCTTCGAGAAACTaGTTGGTAGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSISSRN*LVACSS
Trigger: GGAGGAGCAGGCTACCAAGCAGTTTCTCGAAGAGAT...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATATCGGAACCATATGGGTaGCCCCACAATCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPISEPYG*PHNQHL
Trigger: AAGGTGCTGATTGTGGGGGCACCCATATGGTTCCGA...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGTCGGAACCATATGGGTaGCCCCACAATCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKESEPYG*PHNQHL
Trigger: AAGGTGCTGATTGTGGGGGCACCCATATGGTTCCGA...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTCCCTGGGCAGATaGTGCGTGACCTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWHSLGR*CVTSDV
Trigger: GACATCTGAGGTCACGCAGCATCTGCCCAGGGAGTG...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTTACCTGTCCTGCCAATaGCTGCACTGCAATGGACCA +
Preference number: 4 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWAYLSCQ*LHCNGP
Trigger: TGGTCCATTGCAGTGCAGGCATTGGCAGGACAGGTA...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp GAATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCGCCAAAGGGAAAGGCTaGCTTGCGTGCACACGTGTG +
Preference number: 4 (lower is better)
Translates to: EYVTWSSSLGRKANAHQTAKGKG*LACTRV
Trigger: CACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGC...GGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCGCCAAAGGGAAAGGCTaGCTTGCGTGCACACGTGTG +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLAKGKG*LACTRV
Trigger: CACACGTGTGCACGCAAGGCAGCCTTTCCCTTTGGC...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTGGGACAAACAGTGATTaGAGGGGACCACCTCACTCA +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTGTNSD*RGPPHS
Trigger: TGAGTGAGGTGGTCCCCTGCAATCACTGTTTGTCCC...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCAAACAGATTCTGGGTTaGGTCTCTGCCTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: KKMVPRLMGISIPALGRLKQILG*VSAFPF
Trigger: GAAAGGGAAGGCAGAGACGCAACCCAGAATCTGTTT...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGAGTGGAACAATTCTATaGCACGGAGCACATCAAACT +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQSGTIL*HGAHQT
Trigger: AGTTTGATGTGCTCCGTGCCATAGAATTGTTCCACT...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCCCACCCAGGTTTTCTaGAAGACACTCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWPTQVF*KTLPGQ
Trigger: CTGCCCAGGGAGTGTCTTCCAGAAAACCTGGGTGGG...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCTGGATGGTCATAGCATaGGGACCTGGAACATGTACT +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFWMVIA*GPGTCT
Trigger: AGTACATGTTCCAGGTCCCCATGCTATGACCATCCA...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACAGCTTCACTCTAGTTTaGTCCAGGCAGGGTACATCC +
Preference number: 4 (lower is better)
Translates to: VAISPHLSSQRERLPCVHSFTLV*SRQGTS
Trigger: GGATGTACCCTGCCTGGACCAAACTAGAGTGAAGCT...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATTAGAGAAGTAGTAGATTATAATGTGCGGGGAGGGGAGACGGACGTGAGCCTGAGGGACACCATAGTCTaGCCAGCTCAAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: IREVVDYNVRGGETDVSLRDTIV*PAQELE
Trigger: TTCCAGTTCTTGAGCTGGCCAGACTATGGTGTCCCT...CAGGCTCACGTCCGTCTCCCCTCCCCGCACATTATAATCTACTACTTCTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTTGCAATGGACCACAATaGGTGGCTCAGGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTCNGPQ*VAQGTA
Trigger: GGCAGTGCCCTGAGCCACCCATTGTGGTCCATTGCA...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCTGCAATGGACCACAATaGGTGGCTCAGGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLCNGPQ*VAQGTA
Trigger: GGCAGTGCCCTGAGCCACCCATTGTGGTCCATTGCA...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGACGGCCAGCAGGTTTTaGCCAGAGGATACCATGCCC +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWTASRF*PEDTMP
Trigger: GGGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGT...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCCGTGCACACGTGTGCTaGGAGACACAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSRAHVC*ETQERS
Trigger: ACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACG...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGACTTATAAACGTGCTTaGCACTCAGGACGATCTCTA +
Preference number: 4 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQTYKRA*HSGRSL
Trigger: TAGAGATCGTCCTGAGTGCCAAGCACGTTTATAAGT...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCCAACAGGTGGCAACTaGAAGGAGATAAGTCATTAC +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWPTGGN*KEISHY
Trigger: GTAATGACTTATCTCCTTCCAGTTGCCACCTGTTGG...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCAGTATGGAATCACAGTaGAGGTCTGTTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCSMESQ*RSVPQI
Trigger: AATTTGGGGAACAGACCTCCACTGTGATTCCATACT...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTCCAACAGGTATGATATaGGGAGTGGTCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: EPPDEMADLYSGAHLASLPTGMI*GVVFHV
Trigger: TACATGGAAGACCACTCCCCATATCATACCTGTTGG...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCCAGGGGTCTGGATGCTaGAGGCCCTCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFIQGSGC*RPSGSS
Trigger: TGAGGACCCAGAGGGCCTTCAGCATCCAGACCCCTG...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATAAAGGGAAATCCATGCTaGGCTAACCCAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPIKGNPC*ANPVSP
Trigger: TGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTT...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GAATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCAGAACCCACCCAGTTTaGGGGTCTAGCAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: EYVTWSSSLGRKANAHQTRTHPV*GSSRLA
Trigger: TGCTAGCCTGCTAGACCCTCAAACTGGGTGGGTTCT...GGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp CCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGAGAAAATTATTGAGGTCTaGTCAGCTGCCAACCTCATC +
Preference number: 4 (lower is better)
Translates to: PPDEMADLYSGAHLASLEKIIEV*SAANLI
Trigger: GATGAGGTTGGCAGCTGATCAGACCTCAATAATTTT...CTCAAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCCGCAAACGCCGCTTCTaGTTCCTTAAGAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFRKRRF*FLKKNL
Trigger: GAGATTTTTCTTAAGGAAGCAGAAGCGGCGTTTGCG...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCCGCAAACGCCGCTTCTaGTTCCTTAAGAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: KKMVPRLMGISIPALGRLRKRRF*FLKKNL
Trigger: GAGATTTTTCTTAAGGAAGCAGAAGCGGCGTTTGCG...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GAATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCGGCCAGAGGATACCATaGCCTCCTTCTCTGCGAACT +
Preference number: 4 (lower is better)
Translates to: EYVTWSSSLGRKANAHQTGQRIP*PPSLRT
Trigger: AGTTCGCAGAGAAGGAGGGCATGGTATCCTCTGGCC...GGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp ATTAGAGAAGTAGTAGATTATAATGTGCGGGGAGGGGAGACGGACGTGAGCCTGGGGGAGAAAGGCAAATaGTCATCAAACCTCCCCATA +
Preference number: 4 (lower is better)
Translates to: IREVVDYNVRGGETDVSLGEKGK*SSNLPI
Trigger: TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCC...CAGGCTCACGTCCGTCTCCCCTCCCCGCACATTATAATCTACTACTTCTCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ATTAGAGAAGTAGTAGATTATAATGTGCGGGGAGGGGAGACGGACGTGAGCCTGAAGATTCGTACCGATTaGATTTGGCTCTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IREVVDYNVRGGETDVSLKIRTD*IWLWLL
Trigger: GAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTT...CAGGCTCACGTCCGTCTCCCCTCCCCGCACATTATAATCTACTACTTCTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp TCTGTCCCAAGAGACAGGAAGCATTCCTTTCAGGGAAGGAACCAAATTTCCCTAACCCCTTTGGTACGCTaGAGACATGAGGACCCTACA +
Preference number: 4 (lower is better)
Translates to: SVPRDRKHSFQGRNQISLTPLVR*RHEDPT
Trigger: TGTAGGGTCCTCATGTCTGCAGCGTACCAAAGGGGT...TAGGGAAATTTGGTTCCTTCCCTGAAAGGAATGCTTCCTGTCTCTTGGGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGTCTGGGTTGCGTCTCTaGCTTCCCTTTCCTTTACCT +
Preference number: 4 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKESGLRL*LPFPLP
Trigger: AGGTAAAGGAAAGGGAAGGCAGAGACGCAACCCAGA...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTGCACTCGGAACCATATaGGTGCCCCCACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTALGTI*VPPQSA
Trigger: TGCTGATTGTGGGGGCACCCATATGGTTCCGAGTGC...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AGAGCAAATCACTGTAACCCTCTGGACCTCACCTTCCTCATCTATATAGAAATGCCCACCCAGGTTTTCTaGAAGACACTCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RANHCNPLDLTFLIYIEMPTQVF*KTLPGQ
Trigger: CTGCCCAGGGAGTGTCTTCCAGAAAACCTGGGTGGG...CATTTCTATATAGATGAGGAAGGTGAGGTCCAGAGGGTTACAGTGATTTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATAAGCTTCACTCTAGTTTaGTCCAGGCAGGGTACATCC +
Preference number: 4 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPISFTLV*SRQGTS
Trigger: GGATGTACCCTGCCTGGACCAAACTAGAGTGAAGCT...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAAGGCCAGCTCAAGAACTaGAAGTGGGTCACCTGGCGT +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKGQLKN*KWVTWR
Trigger: ACGCCAGGTGACCCACTTCCAGTTCTTGAGCTGGCC...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATAAGGGACACCATAGTCTaGCCAGCTCAAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPIRDTIV*PAQELE
Trigger: TTCCAGTTCTTGAGCTGGCCAGACTATGGTGTCCCT...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCCTGCGAACTCCAGGATaGCCTTGTAGCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFLRTPG*PCSKNS
Trigger: ACTATTTTTGCTACAAGGCCATCCTGGAGTTCGCAG...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTCTTGGTCAAGCTCTCTaGGGAGAAAGGCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTLGQAL*GERQML
Trigger: GAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAG...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTACTTATAAACGTGCTTaGCACTCAGGACGATCTCTA +
Preference number: 4 (lower is better)
Translates to: EPPDEMADLYSGAHLASLTYKRA*HSGRSL
Trigger: TAGAGATCGTCCTGAGTGCCAAGCACGTTTATAAGT...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCCGAAGAGGTTCCTCATaGGGTTTCAGCTTTACAATG +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSRRGSS*GFSFTM
Trigger: CATTGTAAAGCTGAAACCTCATGAGGAACCTCTTCG...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCCGTTCCTCTGTGTTGTaGATTTCTAGCGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFRSSVL*ISSVVF
Trigger: GAAAACAACGCTAGAAATTCACAACACAGAGGAACG...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTGACTCTGCTGGTTTCTaGCCACTCTCAAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTDSAGF*PLSRSQ
Trigger: TTGACTTCTTGAGAGTGGTCAGAAACCAGCAGAGTC...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCGGTGAAGCTTTTTATTaGCACAGAACCCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSGEAFY*HRTHPV
Trigger: AACTGGGTGGGTTCTGTGTCAATAAAAAGCTTCACC...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAAGTAGGGGACAAACAGTaGTTGCAGGGGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKVGDKQ*LQGTTS
Trigger: TGAGGTGGTCCCCTGCAATCACTGTTTGTCCCCTAC...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCAAAATTATTGAGGTCTaGTCAGCTGCCAACCTCATC +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFKIIEV*SAANLI
Trigger: GATGAGGTTGGCAGCTGATCAGACCTCAATAATTTT...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GAATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCCAAAGTCTCAGATACTaGAGGCTTGGGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: EYVTWSSSLGRKANAHQTQSLRY*RLGSLP
Trigger: AGGGAGGGACCCAAGCCTTCAGTATCTGAGACTTTG...GGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCCACATCAAACTTCCTTaGCATGAGGAACTTGACAGC +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSHIKLP*HEELDS
Trigger: GCTGTCAAGTTCCTCATGGCAAGGAAGTTTGATGTG...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTTCCCTGGGCAGATGCTaGGTGACCTCAGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCSLGRC*VTSDVF
Trigger: AAAGACATCTGAGGTCACGCAGCATCTGCCCAGGGA...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp TCATCTGGAGAAGGAACTAGATTAATCTTCTGCTCTACACTTGAGCTCCTGATTCACTCCCTGGGCAGATaGTGCGTGACCTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SSGEGTRLIFCSTLELLIHSLGR*CVTSDV
Trigger: GACATCTGAGGTCACGCAGCATCTGCCCAGGGAGTG...AATCAGGAGCTCAAGTGTAGAGCAGAAGATTAATCTAGTTCCTTCTCCAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AGAGCAAATCACTGTAACCCTCTGGACCTCACCTTCCTCATCTATATAGAAATGCAAGGAGTCCTGAACTaGAACACGGAGCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RANHCNPLDLTFLIYIEMQGVLN*NTEPQE
Trigger: TTCCTGGGGCTCCGTGTTGCAGTTCAGGACTCCTTG...CATTTCTATATAGATGAGGAAGGTGAGGTCCAGAGGGTTACAGTGATTTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTGGGACAAACAGTGATTaGAGGGGACCACCTCACTCA +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTGTNSD*RGPPHS
Trigger: TGAGTGAGGTGGTCCCCTGCAATCACTGTTTGTCCC...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGACTCTGTCATTTACCTaGATACTGTCACATGAAGAC +
Preference number: 4 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWTLSFT*ILSHED
Trigger: GTCTTCATGTGACAGTATGCAGGTAAATGACAGAGT...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTCTTCTTCAAACGAGCTaGAAATGCTCCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTLLQTS*KCSLQQ
Trigger: CTGCTGAAGGGAGCATTTCCAGCTCGTTTGAAGAAG...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCTCGAAGGGATCTGGGTaGCCGTTCACCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFISKGSG*PFTWGR
Trigger: CCTACCCCAGGTGAACGGCCACCCAGATCCCTTCGA...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGAGCCCCAGGAACTTCTaGAAAGGAGTATCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKESPRNF*KGVSCV
Trigger: TACACACGATACTCCTTTCCAGAAGTTCCTGGGGCT...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTGCACTGAACTGGTGCTaGTCCCTCTGTCCAGAGATA +
Preference number: 4 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCALNWC*SLCPEI
Trigger: TATCTCTGGACAGAGGGACCAGCACCAGTTCAGTGC...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCCTACTACATGAAGCATaGGCACAAGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFLLHEA*AQEQQP
Trigger: AGGTTGTTGTTCTTGTGCCCATGCTTCATGTAGTAG...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCTAGATTGGTCACTGTaGGGAAGCCAAATCGGATCC +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLLDWSL*GSQIGS
Trigger: GGATCCGATTTGGCTTCCTCACAGTGACCAATCTAG...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCCGTTCCTCTGTGTTGTaGATTTCTAGCGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSRSSVL*ISSVVF
Trigger: GAAAACAACGCTAGAAATTCACAACACAGAGGAACG...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCTCTCAAGAAGTCAATaGGGGAAGCTGCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLLSRSQ*GKLLRK
Trigger: CTTCCTCAGCAGCTTCCCTCATTGACTTCTTGAGAG...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTGGTGAAGCTTTTTATTaGCACAGAACCCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTGEAFY*HRTHPV
Trigger: AACTGGGTGGGTTCTGTGTCAATAAAAAGCTTCACC...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGAATTGTTGTGAGGTTTaGATGAGGCAGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWNCCEV*MRQGGG
Trigger: TCCCCCACCCTGCCTCATTCAAACCTCACAACAATT...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTATCTCTTCGAGAAACTaGTTGGTAGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTISSRN*LVACSS
Trigger: GGAGGAGCAGGCTACCAAGCAGTTTCTCGAAGAGAT...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATACACATCAAACTTCCTTaGCATGAGGAACTTGACAGC +
Preference number: 4 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPIHIKLP*HEELDS
Trigger: GCTGTCAAGTTCCTCATGGCAAGGAAGTTTGATGTG...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACCCAAAGGACCTTGTGTaGCAATGTAAGCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: VAISPHLSSQRERLPCVHPKDLV*QCKHSS
Trigger: AGAAGAATGCTTACATTGGCACACAAGGTCCTTTGG...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AGAGCAAATCACTGTAACCCTCTGGACCTCACCTTCCTCATCTATATAGAAATGTACCTGTCCTGCCAATaGCTGCACTGCAATGGACCA +
Preference number: 4 (lower is better)
Translates to: RANHCNPLDLTFLIYIEMYLSCQ*LHCNGP
Trigger: TGGTCCATTGCAGTGCAGGCATTGGCAGGACAGGTA...CATTTCTATATAGATGAGGAAGGTGAGGTCCAGAGGGTTACAGTGATTTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTGCAATGAGGAACTCATaGATAACCTTAAATTCACAG +
Preference number: 4 (lower is better)
Translates to: EPPDEMADLYSGAHLASLAMRNS*ITLNSQ
Trigger: CTGTGAATTTAAGGTTATGCATGAGTTCCTCATTGC...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCTTGCCCAGGCTAGAGTaGAATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFILPRLE*NGAISA
Trigger: AGCCGAGATCGCGCCATTGCACTCTAGCCTGGGCAA...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCAGTGGAACAATTCTATaGCACGGAGCACATCAAACT +
Preference number: 4 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSSGTIL*HGAHQT
Trigger: AGTTTGATGTGCTCCGTGCCATAGAATTGTTCCACT...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AGAGCAAATCACTGTAACCCTCTGGACCTCACCTTCCTCATCTATATAGAAATGCTCAAGAACTGGAAGTaGGTCACCTGGCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RANHCNPLDLTFLIYIEMLKNWK*VTWRFC
Trigger: GCAGAAACGCCAGGTGACCCACTTCCAGTTCTTGAG...CATTTCTATATAGATGAGGAAGGTGAGGTCCAGAGGGTTACAGTGATTTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTATGCGTGACACCGTCTaGAACACATTAAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTMRDTV*NTLRVP
Trigger: TGGCACCCTTAATGTGTTCCAGACGGTGTCACGCAT...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAACCTGTGGCAGGAACATaGAGGAGATGTGTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKPVAGT*RRCVCV
Trigger: GACACACACACATCTCCTCCATGTTCCTGCCACAGG...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCTTGGCTCCAACAGGTaGCAACTGGAAGGAGATAAG +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWLGSNR*QLEGDK
Trigger: CTTATCTCCTTCCAGTTGCCACCTGTTGGAGCCAAG...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCCATGAACTAAATCTATaGTTCCCAAACCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCHELNL*FPNLDN
Trigger: ATTATCCAGGTTTGGGAACCATAGATTTAGTTCATG...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp TCTGTCCCAAGAGACAGGAAGCATTCCTTTCAGGGAAGGAACCAAATTTCCCTACCTAGGACTTGGGTTTaGTTCAGTGGTAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: SVPRDRKHSFQGRNQISLPRTWV*FSGKTS
Trigger: TGAGGTCTTACCACTGAACCAAACCCAAGTCCTAGG...TAGGGAAATTTGGTTCCTTCCCTGAAAGGAATGCTTCCTGTCTCTTGGGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCTGGGCAGATGCTGCGTaGCCTCAGATGTCTTTAATA +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLWADAA*PQMSLI
Trigger: TATTAAAGACATCTGAGGTCACGCAGCATCTGCCCA...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTTGGCGAGATCAATTTTaGCGTACCCACCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTWRDQF*RTHPGF
Trigger: AAAACCTGGGTGGGTACGTCAAAATTGATCTCGCCA...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGGGCCTACAGACAAGGTaGACTCATAGTGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWGLQTR*THSVRT
Trigger: AGTTCTGACACTATGAGTTCACCTTGTCTGTAGGCC...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp CTGAAAGGAGAGCTAAACAAACCTCTGTTCTCCAAACACAAGATCTCCATCTTCAACAGCCAACAGGTATaGTATGGGGAGTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LKGELNKPLFSKHKISIFNSQQV*YGEWSS
Trigger: GGAAGACCACTCCCCATATCATACCTGTTGGCTGTT...GAAGATGGAGATCTTGTGTTTGGAGAACAGAGGTTTGTTTAGCTCTCCTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTACTGCACTTGGACCCTaGGCATTTTCTCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTTALGP*AFSLAL
Trigger: CAAAGCAAGAGAAAATGCTCAGGGTCCAAGTGCAGT...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCCAAAGAACTGGACCCTaGCAGTCAGAGGACCCATGG +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFIQRTGP*QSEDPW
Trigger: CCATGGGTCCTCTGACTGTCAGGGTCCAGTTCTTTG...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCGACAGAGACCTGACCTaGTTTTCCTCCAATTGGAAG +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLDRDLT*FSSNWK
Trigger: CTTCCAATTGGAGGAAAAGCAGGTCAGGTCTCTGTC...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AGAGCAAATCACTGTAACCCTCTGGACCTCACCTTCCTCATCTATATAGAAATGCCCTTGGTCTGTTCATaGTTTGCCTCTGAGAAACCC +
Preference number: 4 (lower is better)
Translates to: RANHCNPLDLTFLIYIEMPLVCS*FASEKP
Trigger: GGGTTTCTCAGAGGCAAAGCATGAACAGACCAAGGG...CATTTCTATATAGATGAGGAAGGTGAGGTCCAGAGGGTTACAGTGATTTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTGGTTTCCTGGAGACATaGAACAGTGGAAAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCGFLET*NSGKCQ
Trigger: TTGGCACTTTCCACTGTTCCATGTCTCCAGGAAACC...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAACTTGGTCAAGCTCTCTaGGGAGAAAGGCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKLGQAL*GERQML
Trigger: GAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAG...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACAAACTAATACATTCTTaGCTCCAACAGGTGGCAACT +
Preference number: 4 (lower is better)
Translates to: VAISPHLSSQRERLPCVHKLIHS*LQQVAT
Trigger: AGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTT...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCGATTGCATTTGGCTCTaGCTGCTCAGTGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLDCIWL*LLSEFI
Trigger: GATGAACTCACTGAGCAGCCAGAGCCAAATGCAATC...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTATCACTGTAACCCTCTaGACCTCACCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCITVTL*TSPSSS
Trigger: AGATGAGGAAGGTGAGGTCCAGAGGGTTACAGTGAT...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AATCTAAGGACTAGGTTGGGAGCTATAGGACCCTTGGTCTGTTCATGCTTTGCCAAACCACAAAAGAGCTaGGTCACTCTAGAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: NLRTRLGAIGPLVCSCFAKPQKS*VTLEKL
Trigger: AAGCTTCTCTAGAGTGACCCAGCTCTTTTGTGGTTT...GGCAAAGCATGAACAGACCAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTTTGGTAGGCTCACAGTaGTTTGTGGGAGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTLVGSQ*FVGVTK
Trigger: CTTGGTTACTCCCACAAACCACTGTGAGCCTACCAA...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAATACCACATGTTGGACTaGCTTGTGGGGATGATGCAA +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKYHMLD*LVGMMQ
Trigger: TTGCATCATCCCCACAAGTCAGTCCAACATGTGGTA...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAATTTGCTCCCATACCATaGGCCAGAAATCACGATAGG +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKFAPIP*ARNHDR
Trigger: CCTATCGTGATTTCTGGCTCATGGTATGGGAGCAAA...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTCACACACACACAGAATaGCAGAAAGGACTGGAATAC +
Preference number: 4 (lower is better)
Translates to: RMTERTGIHALLINVLGTHTHTE*QKGLEY
Trigger: GTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTG...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR TCA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTCTTCTGCTCTACACTTaGGCTCCTGATTATGGTAAG +
Preference number: 4 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCLLLYT*APDYGK
Trigger: CTTACCATAATCAGGAGCTCAAGTGTAGAGCAGAAG...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGATAGGGTCAGAAACATaGACTAAATCTATGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKEIGSET*TKSMVP
Trigger: GGGAACCATAGATTTAGTTCATGTTTCTGACCCTAT...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGATCACCAAGACTTTTTaGTCCCATACCATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWITKTF*SHTMSQ
Trigger: CTGGCTCATGGTATGGGAGCAAAAAGTCTTGGTGAT...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATCCCTCTGGGTCCTCATaGGTGACACCGTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYPSGSS*VTPSGT
Trigger: TGTTCCAGACGGTGTCACGCATGAGGACCCAGAGGG...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATAAAGGCTGCCTTGCGTaGACACGTGTGCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYKGCLA*TRVLGD
Trigger: GTCTCCCAGCACACGTGTGCACGCAAGGCAGCCTTT...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATAGAATTAAGAACACATTaGTACTGGCCCTTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPIELRTH*YWPFLV
Trigger: CACTAGAAAGGGCCAGTAGCAATGTGTTCTTAATTC...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAAAAGATTCGTACCGATTaGATTTGGCTCTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKKIRTD*IWLWLL
Trigger: GAGCAGCCAGAGCCAAATGCAATCGGTACGAATCTT...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCGTCAATTATGAACAGTaGAGTCTAGAACACTTGATA +
Preference number: 4 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFVNYEQ*SLEHLI
Trigger: TATCAAGTGTTCTAGACTGCACTGTTCATAATTGAC...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGAATGACAGAAAGGACTaGAATACACGCCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKENDRKD*NTRPTY
Trigger: ATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATT...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTAATGACAGAAAGGACTaGAATACACGCCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTNDRKD*NTRPTY
Trigger: ATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATT...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCCCTGTGGCAGGAACATaGAGGAGATGTGTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFIPVAGT*RRCVCV
Trigger: GACACACACACATCTCCTCCATGTTCCTGCCACAGG...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCCAACAGGTGGCAACTaGAAGGAGATAAGTCATTAC +
Preference number: 4 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWPTGGN*KEISHY
Trigger: GTAATGACTTATCTCCTTCCAGTTGCCACCTGTTGG...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTAAACTAATACATTCTTaGCTCCAACAGGTGGCAACT +
Preference number: 4 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTKLIHS*LQQVAT
Trigger: AGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTT...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCCGTACCGATTGCATTTaGCTCTGGCTGCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFIRTDCI*LWLLSE
Trigger: CTCACTGAGCAGCCAGAGCCAAATGCAATCGGTACG...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp TCATCTGGAGAAGGAACTAGATTAATCTTCTGCTCTACACTTGAGCTCCTGATTTGGAGTCAGATGGTCTaGGATCCTGGCTGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SSGEGTRLIFCSTLELLIWSQMV*DPGCSK
Trigger: TTTGCTACAGCCAGGATCCCAGACCATCTGACTCCA...AATCAGGAGCTCAAGTGTAGAGCAGAAGATTAATCTAGTTCCTTCTCCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp ACACAAGATCTCCATCTTCCATGCAGTGAAGAGACCACAGGCTTTGTAAGCAGATGGCAGATCAGAAGATaGATCCTTAGAGGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: TQDLHLPCSEETTGFVSRWQIRR*ILRGSL
Trigger: TAGACTTCCTCTAAGGATCCATCTTCTGATCTGCCA...TCTGCTTACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGGAGATCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp TCTGTCCCAAGAGACAGGAAGCATTCCTTTCAGGGAAGGAACCAAATTTCCCTACTAATAGCTCCTCTATaGGTGTTTGCACTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: SVPRDRKHSFQGRNQISLLIAPL*VFALSN
Trigger: GTTAGACAGTGCAAACACCCATAGAGGAGCTATTAG...TAGGGAAATTTGGTTCCTTCCCTGAAAGGAATGCTTCCTGTCTCTTGGGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CAA 72 bp CTCAGATTTCCAAGAATCTCTGTTCACTTCTTATGTTaGTGCACTCCCAAGAGAATGGAGGCTCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRFPRISVHFLC*CTPKRMEAHLE
Trigger: CTCCAGATGAGCCTCCATTCTCTTGGGAGTGCACAAACATAAGAAGTGAACAGAGATTCTTGGAAATCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
3UTR CAA 72 bp ATAAAGCCACTGCACTTGGACCCTGAGCATTTTCTCTaGCTTTGTTCACTAAGTCTCCTGTATGAGAACCCT +
Preference number: 4 (lower is better)
Translates to: IKPLHLDPEHFL*LCSLSLLYENP
Trigger: AGGGTTCTCATACAGGAGACTTAGTGAACAAAGCAAGAGAAAATGCTCAGGGTCCAAGTGCAGTGGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAACACACACACACAGAATaGCAGAAAGGACTGGAATAC +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKHTHTE*QKGLEY
Trigger: GTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTG...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCTTGCGTGCACACGTGTaGTGGGAGACACAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFILRAHV*WETQER
Trigger: TCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAA...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATGGGTGGCCGTTCACCTaGGGTAGGAACTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYGWPFT*GRNWKF
Trigger: GAATTTCCAGTTCCTACCCCAGGTGAACGGCCACCC...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCAGAACACATTGCTACTaGCCCTTTCTAGTGGCAATT +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLRTHCY*PFLVAI
Trigger: AATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCT...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATAAGGAAGGGGCCCTGTaGCAGGAACATGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYKEGAL*QEHGGD
Trigger: ATCTCCTCCATGTTCCTGCCACAGGGCCCCTTCCTT...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCCTTGGCTCCAACAGGTaGCAACTGGAAGGAGATAAG +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFILGSNR*QLEGDK
Trigger: CTTATCTCCTTCCAGTTGCCACCTGTTGGAGCCAAG...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCTATGGTTCCCAAACCTaGATAATCCTGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLYGSQT*IILSLT
Trigger: AGTGAGTGACAGGATTATCCAGGTTTGGGAACCATA...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp CTGAAAGGAGAGCTAAACAAACCTCTGTTCTCCAAACACAAGATCTCCATCTTCGGGGAAACATTGTACTaGACTGTCCACTTGTTAATC +
Preference number: 4 (lower is better)
Translates to: LKGELNKPLFSKHKISIFGETLY*TVHLLI
Trigger: GATTAACAAGTGGACAGTTCAGTACAATGTTTCCCC...GAAGATGGAGATCTTGTGTTTGGAGAACAGAGGTTTGTTTAGCTCTCCTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ACACAAGATCTCCATCTTCCATGCAGTGAAGAGACCACAGGCTTTGTAAGCAGAGTAAATTGGCTGCTATaGCTATTATTAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: TQDLHLPCSEETTGFVSRVNWLL*LLLRTP
Trigger: GGGTGTTCTTAATAATAGTCATAGCAGCCAATTTAC...TCTGCTTACAAAGCCTGTGGTCTCTTCACTGCATGGAAGATGGAGATCTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCGAATTAAGAACACATTaGTACTGGCCCTTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLELRTH*YWPFLV
Trigger: CACTAGAAAGGGCCAGTAGCAATGTGTTCTTAATTC...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCACTAGATTAATCTTCTaGTCTACACTTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLTRLIF*STLELL
Trigger: CAGGAGCTCAAGTGTAGAGCAGAAGATTAATCTAGT...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp GAATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCACCAGTCTTCAGATATaGAATGAGGAACTCATGCAT +
Preference number: 4 (lower is better)
Translates to: EYVTWSSSLGRKANAHQTTSLQI*NEELMH
Trigger: ATGCATGAGTTCCTCATTGCATATCTGAAGACTGGT...GGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAAAGAACACATTGCTACTaGCCCTTTCTAGTGGCAATT +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKRTHCY*PFLVAI
Trigger: AATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCT...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAACTAGAATATGTAACTTaGTCAAGCTCTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KNHRIREIHAELTQCHHKLEYVT*SSSLGR
Trigger: TCTCCCCAGAGAGCTTGACCAAGTTACATATTCTAG...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATGCACTCCCAAGAGAATaGAGGCTCATCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYALPRE*RLIWRR
Trigger: CCTTCTCCAGATGAGCCTCCATTCTCTTGGGAGTGC...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp TCATCTGGAGAAGGAACTAGATTAATCTTCTGCTCTACACTTGAGCTCCTGATTAAAAGCTACAAACAATaGCAGTGGGAGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSGEGTRLIFCSTLELLIKSYKQ*QWEEFL
Trigger: GAGGAACTCCTCCCACTGCCATTGTTTGTAGCTTTT...AATCAGGAGCTCAAGTGTAGAGCAGAAGATTAATCTAGTTCCTTCTCCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCACATCTGGCCAGTCTTaGGGCTTTAAGACAAACTAC +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFITSGQS*GFKTNY
Trigger: GTAGTTTGTCTTAAAGCCTCAAGACTGGCCAGATGT...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATCTGGGGAAGAAAAAGTaGAGGCGAAGAGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYLGKKK*RRRANS
Trigger: GCTGTTAGCTCTTCGCCTGCACTTTTTCTTCCCCAG...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR GCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATTGTCCTGCCAATGCCTaGACTGCAATGGACCACAAT +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYCPANA*TAMDHN
Trigger: ATTGTGGTCCATTGCAGTGCAGGCATTGGCAGGACA...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR TCA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCGATGTCTTTAATATTTaGATCCTCTCCCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: IKNTLLLALSSGNFTTFIDVFNI*ILSRTL
Trigger: CAAAGTCCGGGAGAGGATTCAAATATTAAAGACATC...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR GCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATCACTTCTTATGTTTGTaGACTCCCAAGAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYHFLCL*TPKRME
Trigger: CTCCATTCTCTTGGGAGTGCACAAACATAAGAAGTG...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CCA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATAGTATGGAATCACAGTaGAGGTCTGTTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYSMESQ*RSVPQI
Trigger: AATTTGGGGAACAGACCTCCACTGTGATTCCATACT...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS CCA 90 bp CGCGTCCCCGCGCCTCAGCAGCCCGGGGCCGGCTCGCGCATAGTGTaGCCGGCAGGGCCCGGCGCCTGCAGCGGCCGCAAACGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: RVPAPQQPGAGSRIV*PAGPGACSGRKRRF
Trigger: GAAGCGGCGTTTGCGGCCGCTGCAGGCGCCGGGCCCTGCCGGCCACACTATGCGCGAGCCGGCCCCGGGCTGCTGAGGCGCGGGGACGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 90 bp TGGCCGGCAGGGCCCGGCGCCTGCAGCGGCCGCAAACGCCGCTTCTaGTTCCTTAAGAAAAATCTCTCCGAACTGCCGCTCTCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: WPAGPGACSGRKRRF*FLKKNLSELPLSSG
Trigger: CCCGGAAGAGAGCGGCAGTTCGGAGAGATTTTTCTTAAGGAAGCAGAAGCGGCGTTTGCGGCCGCTGCAGGCGCCGGGCCCTGCCGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 90 bp CTGCTCAGGGGTCTGGATGCTGAAGGCCCTCTGGGTCCTCATGCGTaGCACCGTCTGGAACACATTAAGGGTGCCAAGCTCCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LLRGLDAEGPLGPHA*HRLEHIKGAKLLQL
Trigger: CAGCTGGAGGAGCTTGGCACCCTTAATGTGTTCCAGACGGTGTCACGCATGAGGACCCAGAGGGCCTTCAGCATCCAGACCCCTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS CCA 90 bp GTCTGGATGCTGAAGGCCCTCTGGGTCCTCATGCGTGACACCGTCTaGAACACATTAAGGGTGCCAAGCTCCTCCAGCTGTGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VWMLKALWVLMRDTV*NTLRVPSSSSCARQ
Trigger: CTGCCTGGCACAGCTGGAGGAGCTTGGCACCCTTAATGTGTTCCAGACGGTGTCACGCATGAGGACCCAGAGGGCCTTCAGCATCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS GCA 90 bp GCAATGGACCACAATGGGTGGCTCAGGGCACTGCCCTTTGGAGCGTaGTCCCATGTTGCTCACAGCCAGACTCTGCTGGTTTCTGACCAC +
Preference number: 5 (lower is better)
Translates to: AMDHNGWLRALPFGA*SHVAHSQTLLVSDH
Trigger: GTGGTCAGAAACCAGCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS CCA 90 bp CTGCACTGCAATGGACCACAATGGGTGGCTCAGGGCACTGCCCTTTaGAGCGTGCTCCCATGTTGCTCACAGCCAGACTCTGCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LHCNGPQWVAQGTAL*SVLPCCSQPDSAGF
Trigger: GAAACCAGCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCATTGCAGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS-3UTR CAA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCCACGGCCAGCAGGTTTaGGCCAGAGGATACCATGCC +
Preference number: 5 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCHGQQV*ARGYHA
Trigger: GGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGTG...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCACGGCCAGCAGGTTTaGGCCAGAGGATACCATGCC +
Preference number: 5 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWHGQQV*ARGYHA
Trigger: GGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGTG...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 90 bp CATGTACTGAGTCCCAGTCTAAGGCAGGAGGGAGGGAGAACAGGATaGTCTCATCGAAGGGATCTGGGTGGCCGTTCACCTGGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: HVLSPSLRQEGGRTG*SHRRDLGGRSPGVG
Trigger: TCCTACCCCAGGTGAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTTCTCCCTCCCTCCTGCCTTAGACTGGGACTCAGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CCA 90 bp GCAGGAGGGAGGGAGAACAGGATGATCTCATCGAAGGGATCTGGGTaGCCGTTCACCTGGGGTAGGAACTGGAAATTCCAAGTGGCGAGA +
Preference number: 5 (lower is better)
Translates to: AGGRENRMISSKGSG*PFTWGRNWKFQVAR
Trigger: TCTCGCCACTTGGAATTTCCAGTTCCTACCCCAGGTGAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTTCTCCCTCCCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp ATGGCGGGAGAAAGGAGGAGGGAGGTTCCTTCCCCACTTACCTCGGGGACCCTAGTGGCGAGATCAATTTaGACGTACCCACCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: MAGERRREVPSPLTSGTLVARSI*TYPPRF
Trigger: AAACCTGGGTGGGTACGTCAAAATTGATCTCGCCAC...TAGGGTCCCCGAGGTAAGTGGGGAAGGAACCTCCCTCCTCCTTTCTCCCGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTTCAGATACTGAAGGCTaGGGTCCCTCCCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: EPPDEMADLYSGAHLASLSDTEG*GPSLPP
Trigger: GGGAGGCAGGGAGGGACCCAAGCCTTCAGTATCTGA...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCGAGCGTGCTCCCATGTaGCTCACAGCCAGACTCTGC +
Preference number: 5 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFERAPM*LTARLC
Trigger: GCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTC...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp CTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGCTTCTCAGGGCACTGCCCTTaGGAGCGTGCTCCCATGTTG +
Preference number: 5 (lower is better)
Translates to: LACTRVLGDTRKKLIHGFSGHCP*ERAPML
Trigger: CAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGA...GAAGCCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 90 bp GGATGGCCTTGTAGCAAAAATAGTACTGCTCAGGGGTCTGGATGCTaGAGGCCCTCTGGGTCCTCATGCGTGACACCGTCTGGAACACAT +
Preference number: 5 (lower is better)
Translates to: GWPCSKNSTAQGSGC*RPSGSSCVTPSGTH
Trigger: ATGTGTTCCAGACGGTGTCACGCATGAGGACCCAGAGGGCCTTCAGCATCCAGACCCCTGAGCAGTACTATTTTTGCTACAAGGCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 90 bp CACTGCCCTTTGGAGCGTGCTCCCATGTTGCTCACAGCCAGACTCTaGTGGTTTCTGACCACTCTCAAGAAGTCAATGAGGGAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: HCPLERAPMLLTARL*WFLTTLKKSMREAA
Trigger: AGCAGCTTCCCTCATTGACTTCTTGAGAGTGGTCAGAAACCAGCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS GCA 90 bp CACGGCCAGCAGGTTTTGGCCAGAGGATACCATGCCCTCCTTCTCTaGGAACTCCAGGATGGCCTTGTAGCAAAAATAGTACTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HGQQVLARGYHALLL*ELQDGLVAKIVLLR
Trigger: CCTGAGCAGTACTATTTTTGCTACAAGGCCATCCTGGAGTTCGCAGAGAAGGAGGGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CCA 90 bp TGCCCTTTGGAGCGTGCTCCCATGTTGCTCACAGCCAGACTCTGCTaGTTTCTGACCACTCTCAAGAAGTCAATGAGGGAAGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CPLERAPMLLTARLC*FLTTLKKSMREAAE
Trigger: CTCAGCAGCTTCCCTCATTGACTTCTTGAGAGTGGTCAGAAACCAGCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS-3UTR CAA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGATCCTCTCCCGGACTTaGTCCTTCAGGAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWILSRT*SFRRRL
Trigger: CAGTCTCCTCCTGAAGGACAAAGTCCGGGAGAGGAT...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTATCCTCTCCCGGACTTaGTCCTTCAGGAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: EPPDEMADLYSGAHLASLILSRT*SFRRRL
Trigger: CAGTCTCCTCCTGAAGGACAAAGTCCGGGAGAGGAT...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGTTCTCCACGCCTAGATaGGTCACTGTGAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWFSTPR*VTVRKP
Trigger: TGGCTTCCTCACAGTGACCAATCTAGGCGTGGAGAA...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp TCCCAGCCACAACTGCCCCAACTGGGCAGGCCATCAACAGCCAACAGGTATGATCAAACAGATTCTGGGTaGCGTCTCTGCCTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SQPQLPQLGRPSTANRYDQTDSG*RLCLPF
Trigger: AAAGGGAAGGCAGAGACGCAACCCAGAATCTGTTTG...ATCATACCTGTTGGCTGTTGATGGCCTGCCCAGTTGGGGCAGTTGTGGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS GCA 90 bp CAGGAGGAGACTGATGATGGAATAGGGCACTCGGAACCATATGGGTaGCCCCACAATCAGCACCTTCTTCAAACGAGCTGGAAATGCTCC +
Preference number: 5 (lower is better)
Translates to: QEETDDGIGHSEPYG*PHNQHLLQTSWKCS
Trigger: GGAGCATTTCCAGCTCGTTTGAAGAAGGTGCTGATTGTGGGGGCACCCATATGGTTCCGAGTGCCCTATTCCATCATCAGTCTCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 90 bp GTTACTGACTCTCCACGGCCAGCAGGTTTTGGCCAGAGGATACCATaGCCTCCTTCTCTGCGAACTCCAGGATGGCCTTGTAGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: VTDSPRPAGFGQRIP*PPSLRTPGWPCSKN
Trigger: ATTTTTGCTACAAGGCCATCCTGGAGTTCGCAGAGAAGGAGGGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGTGGAGAGTCAGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CCA 90 bp ATCTCATCGAAGGGATCTGGGTGGCCGTTCACCTGGGGTAGGAACTaGAAATTCCAAGTGGCGAGATCAATTTTGACGTACCCACCCAGG +
Preference number: 5 (lower is better)
Translates to: ISSKGSGWPFTWGRN*KFQVARSILTYPPR
Trigger: CCTGGGTGGGTACGTCAAAATTGATCTCGCCACTTGGAATTTCCAGTTCCTACCCCAGGTGAACGGCCACCCAGATCCCTTCGATGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTTGCCATGAGGAACTaGACAGCCACATTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWLAMRN*TATFQD
Trigger: GTCTTGGAATGTGGCTGTCAAGTTCCTCATGGCAAG...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp CCTGGGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCAATGGAGGCTCCTGTaGGGTCCCGAACATTTAAGA +
Preference number: 5 (lower is better)
Translates to: PGLPLLPSKIRTDCIWLWQWRLL*GPEHLR
Trigger: TCTTAAATGTTCGGGACCCAACAGGAGCCTCCATTG...CCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTTCAGGGCACTGCCCTTaGGAGCGTGCTCCCATGTTG +
Preference number: 5 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWASGHCP*ERAPML
Trigger: CAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGA...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCTTTCCATTCCTGCCCTaGGTAGGCTCACAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCFPFLP*VGSQWF
Trigger: AAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS TCA 90 bp CTGCTGGTTTCTGACCACTCTCAAGAAGTCAATGAGGGAAGCTGCTaGGGAAGGGACACCATAGTCTGGCCAGCTCAAGAACTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LLVSDHSQEVNEGSC*GRDTIVWPAQELEV
Trigger: CACTTCCAGTTCTTGAGCTGGCCAGACTATGGTGTCCCTTCCTCAGCAGCTTCCCTCATTGACTTCTTGAGAGTGGTCAGAAACCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS CCA 90 bp ATTCCAAGTGGCGAGATCAATTTTGACGTACCCACCCAGGTTTTCTaGAAGACACTCCCTGGGCAGATGCTGCGTGACCTCAGATGTCTT +
Preference number: 5 (lower is better)
Translates to: IPSGEINFDVPTQVF*KTLPGQMLRDLRCL
Trigger: AAGACATCTGAGGTCACGCAGCATCTGCCCAGGGAGTGTCTTCCAGAAAACCTGGGTGGGTACGTCAAAATTGATCTCGCCACTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CCA 90 bp GAGAACAGGATGATCTCATCGAAGGGATCTGGGTGGCCGTTCACCTaGGGTAGGAACTGGAAATTCCAAGTGGCGAGATCAATTTTGACG +
Preference number: 5 (lower is better)
Translates to: ENRMISSKGSGWPFT*GRNWKFQVARSILT
Trigger: CGTCAAAATTGATCTCGCCACTTGGAATTTCCAGTTCCTACCCCAGGTGAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTCTTCGAGAAACTGCTaGGTAGCCTGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTSSRNC*VACSSS
Trigger: GGAGGAGGAGCAGGCTACCAAGCAGTTTCTCGAAGA...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCCTTGCCATGAGGAACTaGACAGCCACATTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: KKMVPRLMGISIPALGRLLAMRN*TATFQD
Trigger: GTCTTGGAATGTGGCTGTCAAGTTCCTCATGGCAAG...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTGAGCGTGCTCCCATGTaGCTCACAGCCAGACTCTGC +
Preference number: 5 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCERAPM*LTARLC
Trigger: GCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTC...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGAGTTCCTGGGATTTTTaGGGAATGTGGAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWSSWDF*GMWSAE
Trigger: CTCAGCACTCCACATTCCCAAAAAATCCCAGGAACT...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCTATGAGAACCCTGACTaGCCAAACAGATTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCYENPD*PNRFWV
Trigger: AACCCAGAATCTGTTTGGCAAGTCAGGGTTCTCATA...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGTGGTCTGTTCATGCTTaGCCTCTGAGAAACCCTGTA +
Preference number: 5 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWWSVHA*PLRNPV
Trigger: TACAGGGTTTCTCAGAGGCAAAGCATGAACAGACCA...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS TCA 90 bp ACCCACCCAGGTTTTCTGGAAGACACTCCCTGGGCAGATGCTGCGTaGCCTCAGATGTCTTTAATATTTGAATCCTCTCCCGGACTTTGT +
Preference number: 5 (lower is better)
Translates to: THPGFLEDTPWADAA*PQMSLIFESSPGLC
Trigger: ACAAAGTCCGGGAGAGGATTCAAATATTAAAGACATCTGAGGTCACGCAGCATCTGCCCAGGGAGTGTCTTCCAGAAAACCTGGGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 90 bp GTAGGAGTGGAACAATTCTATGGCACGGAGCACATCAAACTTCCTTaGCATGAGGAACTTGACAGCCACATTCCAAGACAGCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: VGVEQFYGTEHIKLP*HEELDSHIPRQRGN
Trigger: GTTTCCCCGCTGTCTTGGAATGTGGCTGTCAAGTTCCTCATGGCAAGGAAGTTTGATGTGCTCCGTGCCATAGAATTGTTCCACTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGAGGTTTAGGACTTTCTaGCCAAGATCCAGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWRFRTF*PRSSSK
Trigger: CTTTGAGCTGGATCTTGGCAAGAAAGTCCTAAACCT...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCTCTAGAATATGTAACTaGGTCAAGCTCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKASRICN*VKLSGE
Trigger: CTCCCCAGAGAGCTTGACCAAGTTACATATTCTAGA...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp GAGCCCCCAGATGAAATGGCTGACCTTTACTCAGGTGCACATCTGGCCAGTCTTCAAACTAATACATTCTaGGCTCCAACAGGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: EPPDEMADLYSGAHLASLQTNTF*APTGGN
Trigger: GTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTG...AAGACTGGCCAGATGTGCACCTGAGTAAAGGTCAGCCATTTCATCTGGGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATAGAGAAGCTTTTCTACTaGGCCAATGCCTCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPIEKLFY*ANASWP
Trigger: GGGCCAAGAGGCATTGGCCAAGTAGAAAAGCTTCTC...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp TGCACACACACACACACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTGTGGCGAGATCAATTTaGACGTACCCACCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: CTHTHTQNDRKDWNTRPTVARSI*TYPPRF
Trigger: AAACCTGGGTGGGTACGTCAAAATTGATCTCGCCAC...AGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGTGTGTGTGTGTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp AACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCCCCATAATAGTCCACCAACTCTaGGATGGTCATAGCATGGGG +
Preference number: 5 (lower is better)
Translates to: NLVKLSGEKGKCSSNLPIIVHQL*DGHSMG
Trigger: CCCCATGCTATGACCATCCAAGAGTTGGTGGACTAT...TATGGGGAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GGCTCCCCCTCCTTCCTTCTAAGATTCGTACCGATTGCATTTGGCTCTGGCTGCATAGATTCCTTGCTTTaGCCTGGCATTAACATAGTC +
Preference number: 5 (lower is better)
Translates to: GSPSFLLRFVPIAFGSGCIDSLL*PGINIV
Trigger: GACTATGTTAATGCCAGGCAAAAGCAAGGAATCTAT...GCAGCCAGAGCCAAATGCAATCGGTACGAATCTTAGAAGGAAGGAGGGGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp CTGCCTTGCGTGCACACGTGTGCTGGGAGACACAAGAAAGAAGTTGATCCATGGATTCTCCAAAGGACCTaGTGTGCCAATGTAAGCATT +
Preference number: 5 (lower is better)
Translates to: LPCVHTCAGRHKKEVDPWILQRT*CANVSI
Trigger: AATGCTTACATTGGCACACAAGGTCCTTTGGAGAAT...CCATGGATCAACTTCTTTCTTGTGTCTCCCAGCACACGTGTGCACGCAAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACAGTTCCTGGGATTTTTaGGGAATGTGGAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VAISPHLSSQRERLPCVHSSWDF*GMWSAE
Trigger: CTCAGCACTCCACATTCCCAAAAAATCCCAGGAACT...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GTGGCAATTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACAGAATGATAACCCCTTaGGTACGCTGCAGACATGAG +
Preference number: 5 (lower is better)
Translates to: VAISPHLSSQRERLPCVHRMITP*VRCRHE
Trigger: CTCATGTCTGCAGCGTACCAAAGGGGTTATCATTCT...GTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAAATTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp GCAACCTATAGGCTCAGCGGTGTCCAGGGTAGTTTAAGGAAGGCTGGCCAACAGGCATTTTCTCTTGCTTaGTTCACTAAGTCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: ATYRLSGVQGSLRKAGQQAFSLA*FTKSPV
Trigger: TACAGGAGACTTAGTGAACAAAGCAAGAGAAAATGC...CTGTTGGCCAGCCTTCCTTAAACTACCCTGGACACCGCTGAGCCTATAGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS TCA 90 bp ACTGGAGACAGGGAAGTCAACAAAATGGATAAATACAGGTATCTCTaGCTCCAGAGCCCCAACTCAACCACTGTACTCCACTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TGDREVNKMDKYRYL*LQSPNSTTVLHSFR
Trigger: CCTGAAGGAGTGGAGTACAGTGGTTGAGTTGGGGCTCTGGAGTCAGAGATACCTGTATTTATCCATTTTGTTGACTTCCCTGTCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564970.1
CDS-3UTR CAA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAATCTTCGAGAAACTGCTaGGTAGCCTGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KNHRIREIHAELTQCHHKSSRNC*VACSSS
Trigger: GGAGGAGGAGCAGGCTACCAAGCAGTTTCTCGAAGA...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp CCTAGGGCTATGATGCTAAATAGTCCATTCTCCCAAGAACAAGTCCTACTCTGTTTCTCCACGCCTAGATaGGTCACTGTGAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PRAMMLNSPFSQEQVLLCFSTPR*VTVRKP
Trigger: TGGCTTCCTCACAGTGACCAATCTAGGCGTGGAGAA...ACAGAGTAGGACTTGTTCTTGGGAGAATGGACTATTTAGCATCATAGCCCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp AAAAAGATGGTTCCCAGGCTGATGGGCATTTCCATTCCTGCCCTTGGTAGGCTCGGAATTAAGAACACATaGCTACTGGCCCTTTCTAGT +
Preference number: 5 (lower is better)
Translates to: KKMVPRLMGISIPALGRLGIKNT*LLALSS
Trigger: ACTAGAAAGGGCCAGTAGCAATGTGTTCTTAATTCC...GAGCCTACCAAGGGCAGGAATGGAAATGCCCATCAGCCTGGGAACCATCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTATAAAGCCACTGCACTaGGACCCTGAGCATTTTCTC +
Preference number: 5 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWAIKPLH*DPEHFL
Trigger: GAGAAAATGCTCAGGGTCCAAGTGCAGTGGCTTTAT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS TCA 90 bp AGGAACTTGACAGCCACATTCCAAGACAGCGGGGAAACATTGTACTaGACTGTCCACTTGTTAATCTCTTCGAGAAACTGCTTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: RNLTATFQDSGETLY*TVHLLISSRNCLVA
Trigger: GGCTACCAAGCAGTTTCTCGAAGAGATTAACAAGTGGACAGTTCAGTACAATGTTTCCCCGCTGTCTTGGAATGTGGCTGTCAAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGAGGTTTAGGACTTTCTaGCCAAGATCCAGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKERFRTF*PRSSSK
Trigger: CTTTGAGCTGGATCTTGGCAAGAAAGTCCTAAACCT...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GTGTCACCACAAACTAATACATTCTTGGCTCCAACAGGTGGCAACTGGAAGGAGAATCACCAAGACTTTTaGCTCCCATACCATGAGCCA +
Preference number: 5 (lower is better)
Translates to: VSPQTNTFLAPTGGNWKENHQDF*LPYHEP
Trigger: TGGCTCATGGTATGGGAGCAAAAAGTCTTGGTGATT...CTCCTTCCAGTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTGTGGTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp TTTCCATTCCTGCCCTTGGTAGGCTCACAGTGGTTTGTGGGAGTAACCAAGGCCTTAATAAGGCACAGTTaGATAGCAGATGCTAGGAAT +
Preference number: 5 (lower is better)
Translates to: FPFLPLVGSQWFVGVTKALIRHS*IADARN
Trigger: ATTCCTAGCATCTGCTATCAAACTGTGCCTTATTAA...GGCCTTGGTTACTCCCACAAACCACTGTGAGCCTACCAAGGGCAGGAATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp TGTGGAGTGCTGAGGACTCTTGATTTATCCCTAGCACATAAGGATGAGTGGGCTACCTACCTCAAAAGGTaGTTGAGGGTGAATGAGATG +
Preference number: 5 (lower is better)
Translates to: CGVLRTLDLSLAHKDEWATYLKR*LRVNEM
Trigger: CATCTCATTCACCCTCAACAACCTTTTGAGGTAGGT...AGCCCACTCATCCTTATGTGCTAGGGATAAATCAAGAGTCCTCAGCACTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp AGAGCAAATCACTGTAACCCTCTGGACCTCACCTTCCTCATCTATATAGAAATGATAGTCCACCAACTCTaGGATGGTCATAGCATGGGG +
Preference number: 5 (lower is better)
Translates to: RANHCNPLDLTFLIYIEMIVHQL*DGHSMG
Trigger: CCCCATGCTATGACCATCCAAGAGTTGGTGGACTAT...CATTTCTATATAGATGAGGAAGGTGAGGTCCAGAGGGTTACAGTGATTTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp ACACAGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGAATCTAAGGACTAGGTaGGGAGCTATAGGACCCTTG +
Preference number: 5 (lower is better)
Translates to: TQNDRKDWNTRPTYKRAWNLRTR*GAIGPL
Trigger: CAAGGGTCCTATAGCTCCCAACCTAGTCCTTAGATT...CCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS TCA 90 bp ATGGTGAATTTTCCACTGAGGATCTCAGAACGAAGAGGTTCCTCATaGGGTTTCAGCTTTACAATGCCTTCCTTCCTTCGAGTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: MVNFPLRISERRGSS*GFSFTMPSFLRVSL
Trigger: CAGAGAAACTCGAAGGAAGGAAGGCATTGTAAAGCTGAAACCTCATGAGGAACCTCTTCGTTCTGAGATCCTCAGTGGAAAATTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTTCTAGAATATGTAACTaGGTCAAGCTCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: RMTERTGIHALLINVLGTSRICN*VKLSGE
Trigger: CTCCCCAGAGAGCTTGACCAAGTTACATATTCTAGA...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTCAAACTAATACATTCTaGGCTCCAACAGGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: RMTERTGIHALLINVLGTQTNTF*APTGGN
Trigger: GTTGCCACCTGTTGGAGCCAAGAATGTATTAGTTTG...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp GGCCATCAACAGCCAACAGGTATGATATGGGGAGTGGTCTTCCATGTACAAAGCTTAGGAGACATCAATTaGTTAACTCTCTATAGGGTC +
Preference number: 5 (lower is better)
Translates to: GHQQPTGMIWGVVFHVQSLGDIN*LTLYRV
Trigger: GACCCTATAGAGAGTTAACAAATTGATGTCTCCTAA...GCTTTGTACATGGAAGACCACTCCCCATATCATACCTGTTGGCTGTTGATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp ATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTCATTCTCCAAAGGACCTaGTGTGCCAATGTAAGCATT +
Preference number: 5 (lower is better)
Translates to: ICNLVKLSGEKGKCSSNLILQRT*CANVSI
Trigger: AATGCTTACATTGGCACACAAGGTCCTTTGGAGAAT...GAGGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAAGACACAAGAAAGAAGTaGATCCATGGCTTCAGCGTA +
Preference number: 5 (lower is better)
Translates to: KNHRIREIHAELTQCHHKDTRKK*IHGFSV
Trigger: TACGCTGAAGCCATGGATCAACTTCTTTCTTGTGTC...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp AGAATGACAGAAAGGACTGGAATACACGCCCTACTTATAAACGTGCTTGGCACTGGAATTAAGAACACATaGCTACTGGCCCTTTCTAGT +
Preference number: 5 (lower is better)
Translates to: RMTERTGIHALLINVLGTGIKNT*LLALSS
Trigger: ACTAGAAAGGGCCAGTAGCAATGTGTTCTTAATTCC...AGTGCCAAGCACGTTTATAAGTAGGGCGTGTATTCCAGTCCTTTCTGTCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp AAAAATCATCGGATAAGGGAAATCCATGCTGAGCTAACCCAGTGTCACCACAAACTCCTCTATGGGTGTTaGCACTGTCTAACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: KNHRIREIHAELTQCHHKLLYGC*HCLTKN
Trigger: GTTCTTTGTTAGACAGTGCAAACACCCATAGAGGAG...TTTGTGGTGACACTGGGTTAGCTCAGCATGGATTTCCCTTATCCGATGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS TCA 90 bp TTTTCTTATAATGATTCATGTTCTCCACGCCTAGATTGGTCACTGTaGGGAAGCCAAATCGGATCCGAGAGTCTTTTTCTAAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: FSYNDSCSPRLDWSL*GSQIGSESLFLKAS
Trigger: ACTGGCCTTTAGAAAAAGACTCTCGGATCCGATTTGGCTTCCTCACAGTGACCAATCTAGGCGTGGAGAACATGAATCATTATAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS-3UTR CAA 90 bp TCATCTGGAGAAGGAACTAGATTAATCTTCTGCTCTACACTTGAGCTCCTGATTGTGAAAGAAGATACTTaGGAGTCAGATGGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SSGEGTRLIFCSTLELLIVKEDT*ESDGLG
Trigger: TCCCAGACCATCTGACTCCAAAGTATCTTCTTTCAC...AATCAGGAGCTCAAGTGTAGAGCAGAAGATTAATCTAGTTCCTTCTCCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp GAATATGTAACTTGGTCAAGCTCTCTGGGGAGAAAGGCAAATGCTCATCAAACCTTAATAAGGCACAGTTaGATAGCAGATGCTAGGAAT +
Preference number: 5 (lower is better)
Translates to: EYVTWSSSLGRKANAHQTLIRHS*IADARN
Trigger: ATTCCTAGCATCTGCTATCAAACTGTGCCTTATTAA...GGTTTGATGAGCATTTGCCTTTCTCCCCAGAGAGCTTGACCAAGTTACATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp ATTAAGAACACATTGCTACTGGCCCTTTCTAGTGGCAATTTCACCACATTTATCATAGATTCCTTGCTTTaGCCTGGCATTAACATAGTC +
Preference number: 5 (lower is better)
Translates to: IKNTLLLALSSGNFTTFIIDSLL*PGINIV
Trigger: GACTATGTTAATGCCAGGCAAAAGCAAGGAATCTAT...GATAAATGTGGTGAAATTGCCACTAGAAAGGGCCAGTAGCAATGTGTTCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS-3UTR CAA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATAATCACCAAGACTTTTaGCTCCCATACCATGAGCCA +
Preference number: 5 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYNHQDF*LPYHEP
Trigger: TGGCTCATGGTATGGGAGCAAAAAGTCTTGGTGATT...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATCCTGAGCATTTTCTCTaGCTTTGTTCACTAAGTCTC +
Preference number: 5 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYPEHFL*LCSLSL
Trigger: GAGACTTAGTGAACAAAGCAAGAGAAAATGCTCAGG...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS-3UTR CAA 90 bp AGGGAGCAATGGGAAAAAGGACACAGGGATTATCTCATGTTTGAAAAATTATATTGCAGTCTAGAACACTaGATATTCACAAGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: REQWEKGHRDYLMFEKLYCSLEH*IFTSVV
Trigger: CACAACACTTGTGAATATCAAGTGTTCTAGACTGCA...ATATAATTTTTCAAACATGAGATAATCCCTGTGTCCTTTTTCCCATTGCTCCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS GCA 72 bp CGTCCTCGCGGACGCTGGCCCTGCGACCTGCGCGGCTaGCTCAGCCAGGCTCCTCGCGGGCGGCCGCAGCGA +
Preference number: 6 (lower is better)
Translates to: RPRGRWPCDLRG*LSQAPRGRPQR
Trigger: TCGCTGCGGCCGCCCGCGAGGAGCCTGGCTGAGGCAGCCGCGCAGGTCGCAGGGCCAGCGTCCGCGAGGACG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618819.5
CDS CCA 72 bp GCGCCTCAGCAGCCCGGGGCCGGCTCGCGCATAGTGTaGCCGGCAGGGCCCGGCGCCTGCAGCGGCCGCAAA +
Preference number: 6 (lower is better)
Translates to: APQQPGAGSRIV*PAGPGACSGRK
Trigger: TTTGCGGCCGCTGCAGGCGCCGGGCCCTGCCGGCCACACTATGCGCGAGCCGGCCCCGGGCTGCTGAGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 72 bp GGGCCCGGCGCCTGCAGCGGCCGCAAACGCCGCTTCTaGTTCCTTAAGAAAAATCTCTCCGAACTGCCGCTC +
Preference number: 6 (lower is better)
Translates to: GPGACSGRKRRF*FLKKNLSELPL
Trigger: GAGCGGCAGTTCGGAGAGATTTTTCTTAAGGAAGCAGAAGCGGCGTTTGCGGCCGCTGCAGGCGCCGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 72 bp GCACTGCAATGGACCACAATGGGTGGCTCAGGGCACTaGCCTTTGGAGCGTGCTCCCATGTTGCTCACAGCC +
Preference number: 6 (lower is better)
Translates to: ALQWTTMGGSGH*PLERAPMLLTA
Trigger: GGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCATTGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS GCA 72 bp CACAATGGGTGGCTCAGGGCACTGCCCTTTGGAGCGTaGTCCCATGTTGCTCACAGCCAGACTCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: HNGWLRALPFGA*SHVAHSQTLLV
Trigger: AACCAGCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS CAA 72 bp CAATGGACCACAATGGGTGGCTCAGGGCACTGCCCTTaGGAGCGTGCTCCCATGTTGCTCACAGCCAGACTC +
Preference number: 6 (lower is better)
Translates to: QWTTMGGSGHCP*ERAPMLLTARL
Trigger: GAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS CAA 90 bp CCTGCACTGCAATGGACCACAATGGGTGGCTCAGGGCACTGCCCTTaGGAGCGTGCTCCCATGTTGCTCACAGCCAGACTCTGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: PALQWTTMGGSGHCP*ERAPMLLTARLCWF
Trigger: AAACCAGCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCATTGCAGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS TCA 72 bp GGTCTGGATGCTGAAGGCCCTCTGGGTCCTCATGCGTaGCACCGTCTGGAACACATTAAGGGTGCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: GLDAEGPLGPHA*HRLEHIKGAKL
Trigger: GAGCTTGGCACCCTTAATGTGTTCCAGACGGTGTCACGCATGAGGACCCAGAGGGCCTTCAGCATCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS GCA 72 bp TCTCCACGGCCAGCAGGTTTTGGCCAGAGGATACCATaGCCTCCTTCTCTGCGAACTCCAGGATGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: SPRPAGFGQRIP*PPSLRTPGWPC
Trigger: ACAAGGCCATCCTGGAGTTCGCAGAGAAGGAGGGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CCA 72 bp AATGGACCACAATGGGTGGCTCAGGGCACTGCCCTTTaGAGCGTGCTCCCATGTTGCTCACAGCCAGACTCT +
Preference number: 6 (lower is better)
Translates to: NGPQWVAQGTAL*SVLPCCSQPDS
Trigger: AGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS CCA 72 bp CTGAAGGCCCTCTGGGTCCTCATGCGTGACACCGTCTaGAACACATTAAGGGTGCCAAGCTCCTCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: LKALWVLMRDTV*NTLRVPSSSSC
Trigger: ACAGCTGGAGGAGCTTGGCACCCTTAATGTGTTCCAGACGGTGTCACGCATGAGGACCCAGAGGGCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS CAA 90 bp ACAATGGGTGGCTCAGGGCACTGCCCTTTGGAGCGTGCTCCCATGTaGCTCACAGCCAGACTCTGCTGGTTTCTGACCACTCTCAAGAAG +
Preference number: 6 (lower is better)
Translates to: TMGGSGHCPLERAPM*LTARLCWFLTTLKK
Trigger: CTTCTTGAGAGTGGTCAGAAACCAGCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS TCA 72 bp AGTCCCAGTCTAAGGCAGGAGGGAGGGAGAACAGGATaGTCTCATCGAAGGGATCTGGGTGGCCGTTCACCT +
Preference number: 6 (lower is better)
Translates to: SPSLRQEGGRTG*SHRRDLGGRSP
Trigger: AGGTGAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTTCTCCCTCCCTCCTGCCTTAGACTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CAA 90 bp AGGAGGTTCGTAGGAGAGTTACTGACTCTCCACGGCCAGCAGGTTTaGGCCAGAGGATACCATGCCCTCCTTCTCTGCGAACTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: RRFVGELLTLHGQQV*ARGYHALLLCELQD
Trigger: ATCCTGGAGTTCGCAGAGAAGGAGGGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGTGGAGAGTCAGTAACTCTCCTACGAACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CAA 72 bp GTAGGAGAGTTACTGACTCTCCACGGCCAGCAGGTTTaGGCCAGAGGATACCATGCCCTCCTTCTCTGCGAA +
Preference number: 6 (lower is better)
Translates to: VGELLTLHGQQV*ARGYHALLLCE
Trigger: TTCGCAGAGAAGGAGGGCATGGTATCCTCTGGCCAAAACCTGCTGGCCGTGGAGAGTCAGTAACTCTCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 72 bp TGTAGCAAAAATAGTACTGCTCAGGGGTCTGGATGCTaGAGGCCCTCTGGGTCCTCATGCGTGACACCGTCT +
Preference number: 6 (lower is better)
Translates to: CSKNSTAQGSGC*RPSGSSCVTPS
Trigger: AGACGGTGTCACGCATGAGGACCCAGAGGGCCTTCAGCATCCAGACCCCTGAGCAGTACTATTTTTGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 72 bp ACTGATGATGGAATAGGGCACTCGGAACCATATGGGTaGCCCCACAATCAGCACCTTCTTCAAACGAGCTGG +
Preference number: 6 (lower is better)
Translates to: TDDGIGHSEPYG*PHNQHLLQTSW
Trigger: CCAGCTCGTTTGAAGAAGGTGCTGATTGTGGGGGCACCCATATGGTTCCGAGTGCCCTATTCCATCATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 72 bp TTGGAGCGTGCTCCCATGTTGCTCACAGCCAGACTCTaGTGGTTTCTGACCACTCTCAAGAAGTCAATGAGG +
Preference number: 6 (lower is better)
Translates to: LERAPMLLTARL*WFLTTLKKSMR
Trigger: CCTCATTGACTTCTTGAGAGTGGTCAGAAACCAGCAGAGTCTGGCTGTGAGCAACATGGGAGCACGCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS CCA 72 bp TTATTCGCTCCGTTCCTCACACTCCCCCTTATCTCCTaGGGAAGAAAAAGTGCAGGCGAAGAGCTAACAGCC +
Preference number: 6 (lower is better)
Translates to: LFAPFLTLPLIS*GRKSAGEELTA
Trigger: GGCTGTTAGCTCTTCGCCTGCACTTTTTCTTCCCCAGGAGATAAGGGGGAGTGTGAGGAACGGAGCGAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CCA 72 bp ATGATCTCATCGAAGGGATCTGGGTGGCCGTTCACCTaGGGTAGGAACTGGAAATTCCAAGTGGCGAGATCA +
Preference number: 6 (lower is better)
Translates to: MISSKGSGWPFT*GRNWKFQVARS
Trigger: TGATCTCGCCACTTGGAATTTCCAGTTCCTACCCCAGGTGAACGGCCACCCAGATCCCTTCGATGAGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CCA 72 bp AGGGAGAACAGGATGATCTCATCGAAGGGATCTGGGTaGCCGTTCACCTGGGGTAGGAACTGGAAATTCCAA +
Preference number: 6 (lower is better)
Translates to: RENRMISSKGSG*PFTWGRNWKFQ
Trigger: TTGGAATTTCCAGTTCCTACCCCAGGTGAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CAA 90 bp TTCACCTGGGGTAGGAACTGGAAATTCCAAGTGGCGAGATCAATTTaGACGTACCCACCCAGGTTTTCTGGAAGACACTCCCTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: FTWGRNWKFQVARSI*TYPPRFSGRHSLGR
Trigger: TCTGCCCAGGGAGTGTCTTCCAGAAAACCTGGGTGGGTACGTCAAAATTGATCTCGCCACTTGGAATTTCCAGTTCCTACCCCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 72 bp TCTGACCACTCTCAAGAAGTCAATGAGGGAAGCTGCTaGGGAAGGGACACCATAGTCTGGCCAGCTCAAGAA +
Preference number: 6 (lower is better)
Translates to: SDHSQEVNEGSC*GRDTIVWPAQE
Trigger: TTCTTGAGCTGGCCAGACTATGGTGTCCCTTCCTCAGCAGCTTCCCTCATTGACTTCTTGAGAGTGGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306726.6
ENST00000563835.1
ENST00000568108.1
ENST00000618819.5
CDS CCA 72 bp AGGATACCATGCCCTCCTTCTCTGCGAACTCCAGGATaGCCTTGTAGCAAAAATAGTACTGCTCAGGGGTCT +
Preference number: 6 (lower is better)
Translates to: RIPCPPSLRTPG*PCSKNSTAQGS
Trigger: AGACCCCTGAGCAGTACTATTTTTGCTACAAGGCCATCCTGGAGTTCGCAGAGAAGGAGGGCATGGTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CAA 72 bp GCACGGAGCACATCAAACTTCCTTGCCATGAGGAACTaGACAGCCACATTCCAAGACAGCGGGGAAACATTG +
Preference number: 6 (lower is better)
Translates to: ARSTSNFLAMRN*TATFQDSGETL
Trigger: CAATGTTTCCCCGCTGTCTTGGAATGTGGCTGTCAAGTTCCTCATGGCAAGGAAGTTTGATGTGCTCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS GCA 72 bp CAGGTTTTGGCCAGAGGATACCATGCCCTCCTTCTCTaGGAACTCCAGGATGGCCTTGTAGCAAAAATAGTA +
Preference number: 6 (lower is better)
Translates to: QVLARGYHALLL*ELQDGLVAKIV
Trigger: TACTATTTTTGCTACAAGGCCATCCTGGAGTTCGCAGAGAAGGAGGGCATGGTATCCTCTGGCCAAAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 72 bp GGTTTTCTGGAAGACACTCCCTGGGCAGATGCTGCGTaGCCTCAGATGTCTTTAATATTTGAATCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GFLEDTPWADAA*PQMSLIFESSP
Trigger: GGGAGAGGATTCAAATATTAAAGACATCTGAGGTCACGCAGCATCTGCCCAGGGAGTGTCTTCCAGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 72 bp GTAGGAACTGGAAATTCCAAGTGGCGAGATCAATTTTaGCGTACCCACCCAGGTTTTCTGGAAGACACTCCC +
Preference number: 6 (lower is better)
Translates to: VGTGNSKWRDQF*RTHPGFLEDTP
Trigger: GGGAGTGTCTTCCAGAAAACCTGGGTGGGTACGTCAAAATTGATCTCGCCACTTGGAATTTCCAGTTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 72 bp CAAGTAAAACAGAGCCTGAAGTACCACATGTTGGACTaGCTTGTGGGGATGATGCAACCTGGCAGTAAAGAG +
Preference number: 6 (lower is better)
Translates to: QVKQSLKYHMLD*LVGMMQPGSKE
Trigger: CTCTTTACTGCCAGGTTGCATCATCCCCACAAGTCAGTCCAACATGTGGTACTTCAGGCTCTGTTTTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000561731.1
ENST00000618819.5
CDS GCA 72 bp GAACAATTCTATGGCACGGAGCACATCAAACTTCCTTaGCATGAGGAACTTGACAGCCACATTCCAAGACAG +
Preference number: 6 (lower is better)
Translates to: EQFYGTEHIKLP*HEELDSHIPRQ
Trigger: CTGTCTTGGAATGTGGCTGTCAAGTTCCTCATGGCAAGGAAGTTTGATGTGCTCCGTGCCATAGAATTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS CAA 72 bp TTGCTTTTGCCTGGCATTAACATAGTCCACCAACTCTaGGATGGTCATAGCATGGGGACCTGGAACATGTAC +
Preference number: 6 (lower is better)
Translates to: LLLPGINIVHQL*DGHSMGTWNMY
Trigger: GTACATGTTCCAGGTCCCCATGCTATGACCATCCAAGAGTTGGTGGACTATGTTAATGCCAGGCAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000564970.1
ENST00000618819.5
CDS TCA 72 bp ACAGCCACATTCCAAGACAGCGGGGAAACATTGTACTaGACTGTCCACTTGTTAATCTCTTCGAGAAACTGC +
Preference number: 6 (lower is better)
Translates to: TATFQDSGETLY*TVHLLISSRNC
Trigger: GCAGTTTCTCGAAGAGATTAACAAGTGGACAGTTCAGTACAATGTTTCCCCGCTGTCTTGGAATGTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 72 bp TTTCCACTGAGGATCTCAGAACGAAGAGGTTCCTCATaGGGTTTCAGCTTTACAATGCCTTCCTTCCTTCGA +
Preference number: 6 (lower is better)
Translates to: FPLRISERRGSS*GFSFTMPSFLR
Trigger: TCGAAGGAAGGAAGGCATTGTAAAGCTGAAACCTCATGAGGAACCTCTTCGTTCTGAGATCCTCAGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306726.6
ENST00000618819.5
CDS TCA 72 bp AATGATTCATGTTCTCCACGCCTAGATTGGTCACTGTaGGGAAGCCAAATCGGATCCGAGAGTCTTTTTCTA +
Preference number: 6 (lower is better)
Translates to: NDSCSPRLDWSL*GSQIGSESLFL
Trigger: TAGAAAAAGACTCTCGGATCCGATTTGGCTTCCTCACAGTGACCAATCTAGGCGTGGAGAACATGAATCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS CAA 90 bp TCACCTGGCGTTTCTGCCGTTCCTCTGTGTTGTGAATTTCTAGCGTaGTTTTCTTATAATGATTCATGTTCTCCACGCCTAGATTGGTCA +
Preference number: 6 (lower is better)
Translates to: SPGVSAVPLCCEFLA*FSYNDSCSPRLDWS
Trigger: TGACCAATCTAGGCGTGGAGAACATGAATCATTATAAGAAAACAACGCTAGAAATTCACAACACAGAGGAACGGCAGAAACGCCAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5
CDS CAA 72 bp GTTTCTGCCGTTCCTCTGTGTTGTGAATTTCTAGCGTaGTTTTCTTATAATGATTCATGTTCTCCACGCCTA +
Preference number: 6 (lower is better)
Translates to: VSAVPLCCEFLA*FSYNDSCSPRL
Trigger: TAGGCGTGGAGAACATGAATCATTATAAGAAAACAACGCTAGAAATTCACAACACAGAGGAACGGCAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306726.6
ENST00000568108.1
ENST00000618819.5