RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPN7 (Homo sapiens)

Ensembl gene IDs: ENSG00000143851

Ensembl transcript IDs: ENST00000309017.7, ENST00000367279.8, ENST00000435759.6, ENST00000462815.5, ENST00000464870.5, ENST00000467283.5, ENST00000468385.1, ENST00000476061.5, ENST00000477554.5, ENST00000477625.5, ENST00000479092.5, ENST00000480836.5, ENST00000486116.5, ENST00000491584.1, ENST00000492451.1, ENST00000492977.5, ENST00000495688.5, ENST00000496197.5, ENST00000629151.2

Found 807 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCGGAGGGTGGCAGGGGTCAGGGGCTGGGTTCCTCAGGCAGCTaGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGC +
Preference number: 1 (lower is better)
Translates to: PPEGGRGQGLGSSGS*PAYRAKVWCRNWYC
Trigger: GCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGCTGCCTGAGGAACCCAGCCCCTGACCCCTGCCACCCTCCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR TCA 90 bp ACAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTaGTGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCA +
Preference number: 1 (lower is better)
Translates to: TESWYQGSCQGRRAW*CGILPSSPSQNGQP
Trigger: TGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 90 bp GAGTGGCCAGCAACCATGGAGGCAGGAGCAGCTCCTCTTTGCCTCTaGGTAGTCCCCACATGTTCCCTCTTCCAGAGATTTCAACTGCCA +
Preference number: 1 (lower is better)
Translates to: EWPATMEAGAAPLCL*VVPTCSLFQRFQLP
Trigger: TGGCAGTTGAAATCTCTGGAAGAGGGAACATGTGGGGACTACTCAGAGGCAAAGAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 90 bp ATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTaGGGTGTGGCGTTCAGTCCTGAGGTAGACCTGAGGTCCCCTGGA +
Preference number: 1 (lower is better)
Translates to: ISEWAASLRFKEEES*GVAFSPEVDLRSPG
Trigger: TCCAGGGGACCTCAGGTCTACCTCAGGACTGAACGCCACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp GCCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTaGTGGGAGTGGCCAGCAACCATGGAGGCAGGAGCAGCTCCTCTT +
Preference number: 1 (lower is better)
Translates to: AMEAKQRLLSLPKSS*WEWPATMEAGAAPL
Trigger: AAGAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp TGTCCTGGATGCGGATCTGGAAGGGTCCATAGGTTTCCTCTTCTGTaGGCCAGTAGTGGACACATTTCTCCTTGCCCTCTCGGAGCTGAG +
Preference number: 1 (lower is better)
Translates to: CPGCGSGRVHRFPLL*ASSGHISPCPLGAE
Trigger: CTCAGCTCCGAGAGGGCAAGGAGAAATGTGTCCACTACTGGCCCACAGAAGAGGAAACCTATGGACCCTTCCAGATCCGCATCCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR TCA 90 bp TCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTCCTGAGTaGGGAGGCCCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTC +
Preference number: 1 (lower is better)
Translates to: SSVLALRVLQERSPE*GGPAVLQIQLLGGF
Trigger: GAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGGGCCTCCTCACTCAGGACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 90 bp ATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTCCTaGGTGAGGAGGCCCAGCTGTTCTCCAGATCCAACTCCTCGGGGG +
Preference number: 1 (lower is better)
Translates to: IILSFSTACSSGEKS*VRRPSCSPDPTPRG
Trigger: CCCCCGAGGAGTTGGATCTGGAGAACAGCTGGGCCTCCTCACTCAGGACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp ATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTaGGAGTGGCCAGCAACCATGGAGGCAGGAGCAGCTCCTCTTTGC +
Preference number: 1 (lower is better)
Translates to: MEAKQRLLSLPKSSW*EWPATMEAGAAPLC
Trigger: GCAAAGAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp ATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTaGTTCAGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTG +
Preference number: 1 (lower is better)
Translates to: MDEGCSFSQVDSEES*FSRASMSAWMVMTL
Trigger: CAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 90 bp CACATGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTaGTTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGA +
Preference number: 1 (lower is better)
Translates to: HMGGGKGNQSPCSFF*LGSSSPSDVWSGSR
Trigger: TCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR GCA 90 bp CTGAGGTCCCCTGGAAATTGTGTTGATGCTGAGATGGATGAGGGGTaGTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGA +
Preference number: 1 (lower is better)
Translates to: LRSPGNCVDAEMDEG*SFSQVDSEESWFSR
Trigger: TCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAACACAATTTCCAGGGGACCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTaGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCA +
Preference number: 1 (lower is better)
Translates to: WVEARVTRVLVLSFD*GHPALPMCGQGAES
Trigger: TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 90 bp GCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGTTaGGACTTGGAGATCAGGACCAGACTTTTCCCCATTCTTGCATCT +
Preference number: 1 (lower is better)
Translates to: ALPMCGQGAESLIGC*DLEIRTRLFPILAS
Trigger: AGATGCAAGAATGGGGAAAAGTCTGGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 90 bp GAGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATaGCACATGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTC +
Preference number: 1 (lower is better)
Translates to: EISTARPGHLCSLLL*HMGGGKGNQSPCSF
Trigger: GAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp GTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCTCCATGTCTGCATaGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAAGCTCTC +
Preference number: 1 (lower is better)
Translates to: VDSEESWFSRASMSA*MVMTLIVFGNSQAL
Trigger: GAGAGCTTGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCTGAACCAGGACTCCTCACTGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR GCA 90 bp TGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTaGTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCCAGCAACCA +
Preference number: 1 (lower is better)
Translates to: CIPRVLFEPWKQNRD*LASLRVVGGSGQQP
Trigger: TGGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp GTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAG +
Preference number: 1 (lower is better)
Translates to: VCHKCQLLSLSSERH*RFPLLSIWGQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
3UTR CCA 90 bp CAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATaGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGAT +
Preference number: 1 (lower is better)
Translates to: QLPGLVTSVAYSYDT*VEARVTRVLVLSFD
Trigger: ATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR GCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCC +
Preference number: 1 (lower is better)
Translates to: REHQDTWASFFVCHK*QLLSLSSERHWRFP
Trigger: GGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR CCA 90 bp GCAAGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATaGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGT +
Preference number: 1 (lower is better)
Translates to: ARYSGSCIPRVLFEP*KQNRDCLASLRVVG
Trigger: ACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp CCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTaGAAACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTA +
Preference number: 1 (lower is better)
Translates to: PSLHVCMDGYDPDCF*KQPSSLGVLSKCKV
Trigger: TACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 90 bp CTCATGGCAGCTAAGCACTTATGTTCATGTTATAGAACAGGAAACTaGAGCTCACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGC +
Preference number: 1 (lower is better)
Translates to: LMAAKHLCSCYRTGN*SSQRVSQRTPGHLG
Trigger: GCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATGAACATAAGTGCTTAGCTGCCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 90 bp GAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGGACACCTaGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTA +
Preference number: 1 (lower is better)
Translates to: ETEAHKECLREHQDT*ASFFVCHKCQLLSL
Trigger: TAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR-3UTR CCA 90 bp CCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: PGWAAVSGLSSTSATRRSTIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...GCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp CCCTGCACTGCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: PCTAVDYDRPGVGGCLRATIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...AGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp CCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCCCTGGTACTGGATGGTaGGCTGCCGCACAGTGTATT +
Preference number: 2 (lower is better)
Translates to: PGWAAVSGLSSTSATRRSPGTGW*AAAQCI
Trigger: AATACACTGTGCGGCAGCTCACCATCCAGTACCAGG...GCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp GCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 2 (lower is better)
Translates to: AVDYDRPGVGGCLRALLHQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...GTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp GCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGCCCACGCTCTTCCTGGTACTaGATGGTGAGCTGCCGCACA +
Preference number: 2 (lower is better)
Translates to: AAVSGLSSTSATRRSRGPRSSWY*MVSCRT
Trigger: TGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG...TGGGCCCCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp ATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: IGPGWAAVSGLSSTSATRDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...CCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTAGTCCGACACAGTGTTaGGCATGGGGCCCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSSPTQC*AWGPGW
Trigger: CCACCCAGGGCCCCATGCCCAACACTGTGTCGGACT...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp GCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGCCCATGCTGCTGCTTCCTGTaGCTGCAAGCACCACTAAGG +
Preference number: 2 (lower is better)
Translates to: AAVSGLSSTSATRRSRGPCCCFL*LQAPLR
Trigger: CCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCA...TGGGCCCCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp CCCTGCACTGCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTTTGCCCTCTCGGAGCTaGGTGAGCATGACAATGAGG +
Preference number: 2 (lower is better)
Translates to: PCTAVDYDRPGVGGCLRALPSRS*VSMTMR
Trigger: CCTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAA...AGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp GCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTCTGCCGAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: AGLHTGPKCGAGTGTALPREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...CGGCAGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp CTGCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCCCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: LQWTTIGPGWAAVSGLSSPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...GGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp TCCTCGGGCTTTCAGCTGTTGACAGCCAATTCGCGTGGCGATGAAGCAGCCCGTGCAGGGGTCAGGGGCTaGGTTCCTCAGGCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: SSGFQLLTANSRGDEAARAGVRG*VPQAAG
Trigger: GCCAGCTGCCTGAGGAACCCAGCCCCTGACCCCTGC...ACGGGCTGCTTCATCGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp GCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTCTGCCGCAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 2 (lower is better)
Translates to: AGLHTGPKCGAGTGTALPQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...CGGCAGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR GCA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTCTTTCATGTCCTGGATaGGGATCTGGAAGGGTCCAT +
Preference number: 2 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSLSCPG*GSGRVH
Trigger: ATGGACCCTTCCAGATCCGCATCCAGGACATGAAAG...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCCCCATTCTTGCATCTaGCCTGTGCTTGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RELVSRQLSGAACLVMRHPHSCI*PVLGQD
Trigger: GTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGG...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLTIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCCAATTCGCGTGGCGATaGAGCAGCCCGTCCGGCCAA +
Preference number: 2 (lower is better)
Translates to: LVSDGLARPKRGCALLTGQFAWR*SSPSGQ
Trigger: TTGGCCGGACGGGCTGCTTCATCGCCACGCGAATTG...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGGATGTAGTTGGCATTaGTGTAATCTCCGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSGCSWH*CNLRPP
Trigger: AGGAGGACGGAGATTACATCAATGCCAACTACATCC...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480836.5
3UTR-3UTR CCA 90 bp GGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTGACAGCAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GTQYPECPLLLGLSAVDSREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...GCTGTCAACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCCCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: QLSGAACLVMRHLTFIPIPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATAGCCCCAGGAAGGAGTaGCTGGAGTGGCTTCTAGAA +
Preference number: 2 (lower is better)
Translates to: RELVSRQLSGAACLVMRHSPRKE*LEWLLE
Trigger: TTCTAGAAGCCACTCCAGCCACTCCTTCCTGGGGCT...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCAGTGGCCAGCAACCATaGAGGCAGGAGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: EGCSFSQVDSEESWFSRASGQQP*RQEQLL
Trigger: GAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACT...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATAGTAGTTGGTGGGAGTaGCCAGCAACCATGGAGGCA +
Preference number: 2 (lower is better)
Translates to: RELVSRQLSGAACLVMRHSSWWE*PATMEA
Trigger: TGCCTCCATGGTTGCTGGCCACTCCCACCAACTACT...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp TGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGATCCCTGCACTGCAGTaGACTACGATAGGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: WSGQAEKRMCFTDRRSSWIPALQ*TTIGPG
Trigger: CCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT...CCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp CTGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTACTGCTGCTGCTTCCTaGGCCACCGGAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LSSRSWHTIPRMSTSPRATAAAS*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGAAGCAGCAGCAGT...AGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462815.5
3UTR-3UTR TCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGAGGAGTGGCCAGTGTTaGAGACCTGGAATCCGGCCC +
Preference number: 2 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMRSGQC*RPGIRP
Trigger: GGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCT...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp CCGGCGCTCTTCCTGGTACTGGATGGTGAGCTGCCGCACAGTGTATTCTGGGCACCTGGTACTGGATGGTaGGCTGCCGCACAGTGTATT +
Preference number: 2 (lower is better)
Translates to: PALFLVLDGELPHSVFWAPGTGW*AAAQCI
Trigger: AATACACTGTGCGGCAGCTCACCATCCAGTACCAGG...TGCCCAGAATACACTGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCCGGGCTTTCAGCTGTTaGCAGCCAATTCGCGTGGCG +
Preference number: 2 (lower is better)
Translates to: LVSDGLARPKRGCALLTGRAFSC*QPIRVA
Trigger: CGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCG...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: GAACLVMRHLTFIPISEWPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGCCCCATTCTTGCATCTaGCCTGTGCTTGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMPHSCI*PVLGQD
Trigger: GTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGG...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCCTAAGAGTAGTTGGTaGGAGTGGCCAGCAACCATG +
Preference number: 2 (lower is better)
Translates to: RELVSRQLSGAACLVMRHPKSSW*EWPATM
Trigger: CATGGTTGCTGGCCACTCCCACCAACTACTCTTAGG...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGTGGGCCACCGGAGGGTaGCAGGGGTCAGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: APVFKFRETLEVPLTVHLWATGG*QGSGAG
Trigger: CCCAGCCCCTGACCCCTGCCACCCTCCGGTGGCCCA...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp TCCTCGGGCTTTCAGCTGTTGACAGCCAATTCGCGTGGCGATGAAGCAGCCCGTACACAGTGTTGGGCATaGGGCCCTGGGTGGCAATGT +
Preference number: 2 (lower is better)
Translates to: SSGFQLLTANSRGDEAARTQCWA*GPGWQC
Trigger: ACATTGCCACCCAGGGCCCCATGCCCAACACTGTGT...ACGGGCTGCTTCATCGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATTGTAGCCTACTCTTATaGCACATGGGTGGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: RELVSRQLSGAACLVMRHCSLLL*HMGGGK
Trigger: CTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACA...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCGAGGATGTGCTTTACTaGCCGGCGCTCTTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCEDVLY*PALFLV
Trigger: TACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTC...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR GCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATGAGATGGATGAGGGGTaGTCATTCTCTCAGGTAGAC +
Preference number: 2 (lower is better)
Translates to: RELVSRQLSGAACLVMRHEMDEG*SFSQVD
Trigger: GTCTACCTGAGAGAATGAGCACCCCTCATCCATCTC...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: PQLAHNTQNVHFSSGFQLDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...CAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCATCCCTGCACTGCAGTaGACTACGATAGGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: LLLLLPVTASTTKEALLPIPALQ*TTIGPG
Trigger: CCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR CAA 90 bp GGAAGCAGAGGAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTaGTCCTTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAG +
Preference number: 2 (lower is better)
Translates to: GSRGVASVEDLESGP*SLLLLLPVTASTTK
Trigger: CTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTCTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000496197.5
3UTR-3UTR TCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCACTCTCAGGTAGACAGTaGGGAGTCCTGGTTCAGCCG +
Preference number: 2 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSLSGRQ*GVLVQP
Trigger: CGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAG...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp GTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGAAGGAGGAGGAATCCTaGGGTGTGGCGTTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: VPGDAASYLHPHLRMGSQKEEES*GVAFSP
Trigger: AGGACTGAACGCCACACCTCAGGATTCCTCCTCCTT...CTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTCAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 2 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR GCA 90 bp TCCTCGGGCTTTCAGCTGTTGACAGCCAATTCGCGTGGCGATGAAGCAGCCCGTGCCGAAAAGAGGATGTaGTTTACTGACCGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: SSGFQLLTANSRGDEAARAEKRM*FTDRRS
Trigger: AGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGC...ACGGGCTGCTTCATCGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCAAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGACCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: LFPILASGLCLGRTSGEGPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGCCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: VPGDAASYLHPHLRMGSQPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...CTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCCCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: LVSDGLARPKRGCALLTGPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp TCAGGCAGCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTGGTGTCTGATGGTCTaGCCAGGCCGAAAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: SGSWPAYRAKVWCRNWYCWCLMV*PGRKED
Trigger: ATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCA...GCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGCTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCACACAGTGTTGGGCATaGGGCCCTGGGTGGCAATGT +
Preference number: 2 (lower is better)
Translates to: LLLLLPVTASTTKEALLPTQCWA*GPGWQC
Trigger: ACATTGCCACCCAGGGCCCCATGCCCAACACTGTGT...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAGGGCAGGACCTCGGGTaGAGGATGATCTTGGAATCA +
Preference number: 2 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSGQDLG*RMILES
Trigger: TGATTCCAAGATCATCCTTCACCCGAGGTCCTGCCC...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGTGTAGCCTACTCTTATaGCACATGGGTGGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMCSLLL*HMGGGK
Trigger: CTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACA...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp AGATCAGGACCAGACTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGATGCTGCTGCTTCCTGTaGCTTCCCAGGCTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: RSGPDFSPFLHLACAWAGCCCFL*LPRLEG
Trigger: TCCCTCAAGCCTGGGAAGTCACAGGAAGCAGCAGCA...TCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTCTGGTCCTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495688.5
3UTR-3UTR GCA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGT +
Preference number: 2 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSFVCHK*QLLSLS
Trigger: ACTTAAAGACAGGAGCTGGCATTTATGACAGACAAA...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR GCA 90 bp TCAGGCAGCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCCTTTCATGTCCTGGATaGGGATCTGGAAGGGTCCAT +
Preference number: 2 (lower is better)
Translates to: SGSWPAYRAKVWCRNWYCLSCPG*GSGRVH
Trigger: ATGGACCCTTCCAGATCCGCATCCAGGACATGAAAG...GCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGCTGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: CLREHQDTWASFFVCHKCREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: AAVGTQYPECPLLLGLSAPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...AGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp GTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGGCAGAGCCCTTCCGATGTGTaGTCAGGGAGCAGAGTCACT +
Preference number: 2 (lower is better)
Translates to: VLQIQLLGGFHRELVSRQSPSDV*SGSRVT
Trigger: AGTGACTCTGCTCCCTGACCACACATCGGAAGGGCT...CTGCCTTGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGTACTCTTATGACACATaGGTGGAGGCAAGGGTAACC +
Preference number: 2 (lower is better)
Translates to: GAACLVMRHLTFIPISEWYSYDT*VEARVT
Trigger: GGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTA...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTCGCTCTTCCTGGTACTaGATGGTGAGCTGCCGCACA +
Preference number: 2 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLRSSWY*MVSCRT
Trigger: TGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp CTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCATGGTGTCTGATGGTCTaGCCAGGCCGAAAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: LPVTASTTKEALLPHTNPWCLMV*PGRKED
Trigger: ATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCA...TGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp GCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTATCCCTGCACTGCAGTaGACTACGATAGGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: AVGTQYPECPLLLGLSAVIPALQ*TTIGPG
Trigger: CCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT...AACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATG +
Preference number: 2 (lower is better)
Translates to: LLLPVTASTTKEALLPHTLSSRS*HTIPRM
Trigger: CATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR TCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGTGCTGCTGCTTCCTGTaGCTGCAAGCACCACTAAGG +
Preference number: 2 (lower is better)
Translates to: RMILESPFCQPQEGVAGVCCCFL*LQAPLR
Trigger: CCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCA...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
3UTR-3UTR TCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGACCTCGGGTGAAGGATaGTCTTGGAATCACCCTTTT +
Preference number: 2 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMTSGEG*SWNHPF
Trigger: AAAAGGGTGATTCCAAGATCATCCTTCACCCGAGGT...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGCCTTGTTCTTTCTTTTaGTTGGGGTCATCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMPCSFF*LGSSSP
Trigger: AGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGG...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR GCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCATCCAGAGATTTCAACTaGCAGGCCTGGTCACCTCTG +
Preference number: 2 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSSRDFN*QAWSPL
Trigger: CAGAGGTGACCAGGCCTGGCAGTTGAAATCTCTGGA...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: ALGKSSSVLALRVLQERSREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 2 (lower is better)
Translates to: PVTASTTKEALLPHTNPRSSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000496197.5
3UTR-3UTR CCA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTCCCCATTCTTGCATCTaGCCTGTGCTTGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCPHSCI*PVLGQD
Trigger: GTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGG...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTGCTGCTGCTTCCTGTaGCTGCAAGCACCACTAAGG +
Preference number: 2 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEECCCFL*LQAPLR
Trigger: CCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCA...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
3UTR-3UTR GCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCCTTGCATCTGGCCTGTaGTTGGGCAGGACCTCGGGT +
Preference number: 2 (lower is better)
Translates to: SENTRTPGLLSLSVINASLASGL*LGRTSG
Trigger: ACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAG...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR GCA 90 bp GTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGGCAGACTTTTCCCCATTCTTaGATCTGGCCTGTGCTTGGG +
Preference number: 2 (lower is better)
Translates to: VLQIQLLGGFHRELVSRQTFPHS*IWPVLG
Trigger: CCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGT...CTGCCTTGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR GCA 90 bp GTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGGCAGGAGATGGATGAGGGGTaGTCATTCTCTCAGGTAGAC +
Preference number: 2 (lower is better)
Translates to: VLQIQLLGGFHRELVSRQEMDEG*SFSQVD
Trigger: GTCTACCTGAGAGAATGAGCACCCCTCATCCATCTC...CTGCCTTGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR GCA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTAGGGACACTTCCTCTTaGCACACCATCTCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLRDTSS*HTISQK
Trigger: CTTCTGGGAGATGGTGTGGCAAGAGGAAGTGTCCCT...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTAGTAGTTGGTGGGAGTaGCCAGCAACCATGGAGGCA +
Preference number: 2 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCSSWWE*PATMEA
Trigger: TGCCTCCATGGTTGCTGGCCACTCCCACCAACTACT...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTCTCCCTAAGAGTAGTTaGTGGGAGTGGCCAGCAACC +
Preference number: 2 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCLPKSS*WEWPAT
Trigger: GGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAG...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: LREHQDTWASFFVCHKCQDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...CTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462815.5
3UTR-3UTR TCA 90 bp TTGGAAACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTAGGAGTGGCCAGTGTTaGAGACCTGGAATCCGGCCC +
Preference number: 2 (lower is better)
Translates to: LETAKLSRCTQQMQGIVGRSGQC*RPGIRP
Trigger: GGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCT...ACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGTTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp GTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGACCCAGGGTATTATTTaGGCCATGGAAGCAAAACAG +
Preference number: 2 (lower is better)
Translates to: VPGDAASYLHPHLRMGSQTQGII*AMEAKQ
Trigger: CTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGT...CTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp AGTGTATTCTGGGCACTCTTTCATGTCCTGGATGCGGATCTGGAAGGGTCCATAGAGGATGTGCTTTACTaGCCGGCGCTCTTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: SVFWALFHVLDADLEGSIEDVLY*PALFLV
Trigger: TACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTC...TATGGACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTGCCCAGAATACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR GCA 90 bp TCTTTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCAACTTTTCCCCATTCTTaGATCTGGCCTGTGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SFDWGHPALPMCGQGAESTFPHS*IWPVLG
Trigger: CCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGT...TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR GCA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGCCGAGCCTCCATGTCTaGATGGATGGTTATGACCCT +
Preference number: 2 (lower is better)
Translates to: RHLTFIPISEWAASLRFKPSLHV*MDGYDP
Trigger: AGGGTCATAACCATCCATGCAGACATGGAGGCTCGG...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCATCTGGCCTGTGCTTaGGCAGGACCTCGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: CLREHQDTWASFFVCHKCHLACA*AGPRVK
Trigger: CTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATG...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCATACTCTTATGACACATaGGTGGAGGCAAGGGTAACC +
Preference number: 2 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSYSYDT*VEARVT
Trigger: GGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTA...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGTGGCCAGCAACCATaGAGGCAGGAGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNSGQQP*RQEQLL
Trigger: GAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACT...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAGTGTTGATGCTGAGATaGATGAGGGGTGCTCATTCT +
Preference number: 2 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSVLMLR*MRGAHS
Trigger: AGAATGAGCACCCCTCATCCATCTCAGCATCAACAC...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CAA 90 bp AGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGTaGAGACTTGGAGATCAGGACCAGACTTTTCCCCATTCTTGCATC +
Preference number: 2 (lower is better)
Translates to: SPSDVWSGSRVTDRM*RLGDQDQTFPHSCI
Trigger: GATGCAAGAATGGGGAAAAGTCTGGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCCTGGTACTGGATGGTaGGCTGCCGCACAGTGTATT +
Preference number: 2 (lower is better)
Translates to: REHQDTWASFFVCHKCQLPGTGW*AAAQCI
Trigger: AATACACTGTGCGGCAGCTCACCATCCAGTACCAGG...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462815.5
3UTR-3UTR TCA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGCAATTCGCGTGGCGATaGAGCAGCCCGTCCGGCCAA +
Preference number: 2 (lower is better)
Translates to: HVIEQETEAHKECLREHQQFAWR*SSPSGQ
Trigger: TTGGCCGGACGGGCTGCTTCATCGCCACGCGAATTG...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462815.5
3UTR-3UTR GCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCATCCAGAGATTTCAACTaGCAGGCCTGGTCACCTCTG +
Preference number: 2 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPASRDFN*QAWSPL
Trigger: CAGAGGTGACCAGGCCTGGCAGTTGAAATCTCTGGA...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: LREHQDTWASFFVCHKCQPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...CTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR-3UTR CCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: SENTRTPGLLSLSVINASPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR-3UTR CCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCAAGCCCCAGGAAGGAGTaGCTGGAGTGGCTTCTAGAA +
Preference number: 2 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPSPRKE*LEWLLE
Trigger: TTCTAGAAGCCACTCCAGCCACTCCTTCCTGGGGCT...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAGGGCAGGACCTCGGGTaGAGGATGATCTTGGAATCA +
Preference number: 2 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPGQDLG*RMILES
Trigger: TGATTCCAAGATCATCCTTCACCCGAGGTCCTGCCC...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCACTGATAGGATGTTaGGACTTGGAGATCAGGACC +
Preference number: 2 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEESLIGC*DLEIRT
Trigger: GGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGA...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCCCTTGTTCTTTCTTTTaGTTGGGGTCATCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGPCSFF*LGSSSP
Trigger: AGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGG...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR GCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGT +
Preference number: 2 (lower is better)
Translates to: LLLPVTASTTKEALLPHTFVCHK*QLLSLS
Trigger: ACTTAAAGACAGGAGCTGGCATTTATGACAGACAAA...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000496197.5
3UTR-3UTR GCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGT +
Preference number: 2 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCFVCHK*QLLSLS
Trigger: ACTTAAAGACAGGAGCTGGCATTTATGACAGACAAA...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
3UTR-3UTR GCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTTACTGGATGGTGAGCTaGCGCACAGTGTATTCTGGG +
Preference number: 2 (lower is better)
Translates to: HKECLREHQDTWASFFVCYWMVS*RTVYSG
Trigger: CCCAGAATACACTGTGCGGCAGCTCACCATCCAGTA...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462815.5
3UTR-3UTR CCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCATTACTTTTCCCTCATaGCAGCTAAGCACTTATGTT +
Preference number: 2 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCITFPS*QLSTYV
Trigger: AACATAAGTGCTTAGCTGCCATGAGGGAAAAGTAAT...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGCATCTGGCCTGTGCTTaGGCAGGACCTCGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: WASFFVCHKCQLLSLSSEHLACA*AGPRVK
Trigger: CTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATG...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCACTCCCTAAGAGTAGTTaGTGGGAGTGGCCAGCAACC +
Preference number: 2 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPLPKSS*WEWPAT
Trigger: GGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAG...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp TTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGTATAGAACAGGAAACTaGAGCTCACAAAGAGTGTCT +
Preference number: 2 (lower is better)
Translates to: FDWGHPALPMCGQGAESLYRTGN*SSQRVS
Trigger: AGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATA...CAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGACCTCGGGTGAAGGATaGTCTTGGAATCACCCTTTT +
Preference number: 2 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWTSGEG*SWNHPF
Trigger: AAAAGGGTGATTCCAAGATCATCCTTCACCCGAGGT...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCACCTTGTTCTTTCTTTTaGTTGGGGTCATCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPAPCSFF*LGSSSP
Trigger: AGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGG...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATG +
Preference number: 2 (lower is better)
Translates to: APVFKFRETLEVPLTVHLLSSRS*HTIPRM
Trigger: CATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR GCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTCCGAGCCTCCATGTCTaGATGGATGGTTATGACCCT +
Preference number: 2 (lower is better)
Translates to: ALGKSSSVLALRVLQERSPSLHV*MDGYDP
Trigger: AGGGTCATAACCATCCATGCAGACATGGAGGCTCGG...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp AACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 2 (lower is better)
Translates to: NTRTPGLLSLSVINASSCSSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...ACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR-3UTR CCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 2 (lower is better)
Translates to: REHQDTWASFFVCHKCQLSSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR-3UTR CCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 2 (lower is better)
Translates to: VSENTRTPGLLSLSVINASSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR-3UTR CCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCAAGGAGTGGCTGGAGTaGCTTCTAGAAACTTCTCTC +
Preference number: 2 (lower is better)
Translates to: REHQDTWASFFVCHKCQLKEWLE*LLETSL
Trigger: GAGAGAAGTTTCTAGAAGCCACTCCAGCCACTCCTT...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGAAGGAGTGGCTGGAGTaGCTTCTAGAAACTTCTCTC +
Preference number: 2 (lower is better)
Translates to: APVFKFRETLEVPLTVHLKEWLE*LLETSL
Trigger: GAGAGAAGTTTCTAGAAGCCACTCCAGCCACTCCTT...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGCCCCAGGAAGGAGTaGCTGGAGTGGCTTCTAGAA +
Preference number: 2 (lower is better)
Translates to: WASFFVCHKCQLLSLSSESPRKE*LEWLLE
Trigger: TTCTAGAAGCCACTCCAGCCACTCCTTCCTGGGGCT...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTGACCCTGATTGTTTTTaGAAACAGCCAAGCTCTCTA +
Preference number: 2 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCDPDCF*KQPSSL
Trigger: TAGAGAGCTTGGCTGTTTCCAAAAACAATCAGGGTC...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCTATAGAACAGGAAACTaGAGCTCACAAAGAGTGTCT +
Preference number: 2 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGYRTGN*SSQRVS
Trigger: AGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATA...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGATTGCCCTCTCGGAGCTaGGTGAGCATGACAATGAGG +
Preference number: 2 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERLPSRS*VSMTMR
Trigger: CCTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAA...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496197.5
3UTR-3UTR GCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGTACTGGATGGTGAGCTaGCGCACAGTGTATTCTGGG +
Preference number: 2 (lower is better)
Translates to: WASFFVCHKCQLLSLSSEYWMVS*RTVYSG
Trigger: CCCAGAATACACTGTGCGGCAGCTCACCATCCAGTA...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACGTTCTTTCTTTTGATTaGGGTCATCCAGCCCTTCCG +
Preference number: 2 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNVLSFD*GHPALP
Trigger: CGGAAGGGCTGGATGACCCCAATCAAAAGAAAGAAC...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GAAGCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAATCCCCATCTCAGAATaGGCAGCCAGTCTCAGATTC +
Preference number: 2 (lower is better)
Translates to: EALGKSSSVLALRVLQERIPISE*AASLRF
Trigger: GAATCTGAGACTGGCTGCCCATTCTGAGATGGGGAT...TCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp GAAGCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAACCTCGGGTGAAGGATaGTCTTGGAATCACCCTTTT +
Preference number: 2 (lower is better)
Translates to: EALGKSSSVLALRVLQERTSGEG*SWNHPF
Trigger: AAAAGGGTGATTCCAAGATCATCCTTCACCCGAGGT...TCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR GCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGAGCCGAAAAGAGGATGTaGTTTACTGACCGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERAEKRM*FTDRRS
Trigger: AGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGC...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
3UTR-3UTR CCA 90 bp GAAGCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 2 (lower is better)
Translates to: EALGKSSSVLALRVLQERSSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...TCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCATATAGAACAGGAAACTaGAGCTCACAAAGAGTGTCT +
Preference number: 2 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPYRTGN*SSQRVS
Trigger: AGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATA...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR GCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGT +
Preference number: 2 (lower is better)
Translates to: VSENTRTPGLLSLSVINAFVCHK*QLLSLS
Trigger: ACTTAAAGACAGGAGCTGGCATTTATGACAGACAAA...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR-3UTR CCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGATTACTTTTCCCTCATaGCAGCTAAGCACTTATGTT +
Preference number: 2 (lower is better)
Translates to: APVFKFRETLEVPLTVHLITFPS*QLSTYV
Trigger: AACATAAGTGCTTAGCTGCCATGAGGGAAAAGTAAT...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CCA 90 bp GGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCTATTACTTTTCCCTCATaGCAGCTAAGCACTTATGTT +
Preference number: 2 (lower is better)
Translates to: GPAYPGYYLSHGSKTETAITFPS*QLSTYV
Trigger: AACATAAGTGCTTAGCTGCCATGAGGGAAAAGTAAT...AGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR TCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATTCACTGATAGGATGTTaGGACTTGGAGATCAGGACC +
Preference number: 2 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHSLIGC*DLEIRT
Trigger: GGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGA...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp ATCCCTGCACTGCAGTGGACTACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCC +
Preference number: 3 (lower is better)
Translates to: IPALQWTTIGPG*AAVSGLSSTSA
Trigger: GGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp CCCAGGCTTGAGGGAGGTAGGCACCTGGGCCACCGGAGGGTGGCAGGGGTCAGGTCGGGCTTTCAGCTGTaGACAGCCAATTCGCGTGGC +
Preference number: 3 (lower is better)
Translates to: PRLEGGRHLGHRRVAGVRSGFQL*TANSRG
Trigger: GCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGA...CCTGACCCCTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCTCAAGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTTCGGGCTTTCAGCTGTaGACAGCCAATTCGCGTGGC +
Preference number: 3 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSSGFQL*TANSRG
Trigger: GCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGA...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp CCGGCGCTCTTCCTGGTACTGGATGGTGAGCTGCCGCACAGTGTATTCTGGGCACCCACCTTCCCAGGCTaGAGGGAGGTAGGCACCTGG +
Preference number: 3 (lower is better)
Translates to: PALFLVLDGELPHSVFWAPTFPG*REVGTW
Trigger: CCAGGTGCCTACCTCCCTCAAGCCTGGGAAGGTGGG...TGCCCAGAATACACTGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp CAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCAGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 3 (lower is better)
Translates to: QRAGIKAAVRGGVPGDAAEEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...TGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCCCCACCTTCCCAGGCTaGAGGGAGGTAGGCACCTGG +
Preference number: 3 (lower is better)
Translates to: LVSDGLARPKRGCALLTGPTFPG*REVGTW
Trigger: CCAGGTGCCTACCTCCCTCAAGCCTGGGAAGGTGGG...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp GCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 3 (lower is better)
Translates to: AVDYDRPGVGGCLRALLHKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...GTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGGCATCTGGCCTGTGCTaGGGCAGGACCTCGGGTGAA +
Preference number: 3 (lower is better)
Translates to: PVTASTTKEALLPHTNPRASGLC*GRTSGE
Trigger: TTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGC...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
3UTR-3UTR CAA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 3 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 3 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMEEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGTCGGGCTTTCAGCTGTaGACAGCCAATTCGCGTGGC +
Preference number: 3 (lower is better)
Translates to: PVTASTTKEALLPHTNPRSGFQL*TANSRG
Trigger: GCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGA...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
3UTR CCA 72 bp ACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTaGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGT +
Preference number: 3 (lower is better)
Translates to: TVHLGPTEEAEE*PVLKTWNPAPC
Trigger: ACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
3UTR TCA 72 bp TGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTaGGGTGTGGCGTTCAGTCCTGAGGTAGACCTGAGG +
Preference number: 3 (lower is better)
Translates to: WAASLRFKEEES*GVAFSPEVDLR
Trigger: CCTCAGGTCTACCTCAGGACTGAACGCCACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 72 bp TGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTaGTGCGGCATCTTACCTTCATCCCCATCTCAGAAT +
Preference number: 3 (lower is better)
Translates to: WYQGSCQGRRAW*CGILPSSPSQN
Trigger: ATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 72 bp ATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTaGCCGGCGCTCTTCCTGGTACTGGATGGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: MVWPGRKEDVLY*PALFLVLDGEL
Trigger: CAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
3UTR TCA 72 bp TCTCCTTCCCGTCATAGCCTCGGATGTAGTTGGCATTaGTGTAATCTCCGTCCTCCTGGCTCTGTGCCCGGC +
Preference number: 3 (lower is better)
Translates to: SPSRHSLGCSWH*CNLRPPGSVPG
Trigger: GCCGGGCACAGAGCCAGGAGGACGGAGATTACATCAATGCCAACTACATCCGAGGCTATGACGGGAAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480836.5
3UTR CCA 72 bp AGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTaGCCAGCAACCATGGAGGCAGGAGCAGCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: RLLSLPKSSWWE*PATMEAGAAPL
Trigger: AAGAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCCCACCTTCCCAGGCTaGAGGGAGGTAGGCACCTGG +
Preference number: 3 (lower is better)
Translates to: LREHQDTWASFFVCHKCQPTFPG*REVGTW
Trigger: CCAGGTGCCTACCTCCCTCAAGCCTGGGAAGGTGGG...CTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
3UTR-3UTR CAA 90 bp GCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTCTGCCGCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 3 (lower is better)
Translates to: AGLHTGPKCGAGTGTALPPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...CGGCAGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR TCA 72 bp TCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTaGAGGATGATCTTGGAATCACCCTTTTGTCAGCCC +
Preference number: 3 (lower is better)
Translates to: SCIWPVLGQDLG*RMILESPFCQP
Trigger: GGGCTGACAAAAGGGTGATTCCAAGATCATCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 72 bp ACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATaGCACATGGGTGGAGGCAAGGGTAACCAGAGTCCT +
Preference number: 3 (lower is better)
Translates to: TARPGHLCSLLL*HMGGGKGNQSP
Trigger: AGGACTCTGGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp AAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTaGGAGTGGCCAGCAACCATGGAGGCAGGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: KQRLLSLPKSSW*EWPATMEAGAA
Trigger: AGCTGCTCCTGCCTCCATGGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp GCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTaGTGGGAGTGGCCAGCAACCATGGAGGCAGGAGCA +
Preference number: 3 (lower is better)
Translates to: AKQRLLSLPKSS*WEWPATMEAGA
Trigger: TGCTCCTGCCTCCATGGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp GGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTaGTTCAGCCGAGCCTCCATGTCTGCATGGATGGTT +
Preference number: 3 (lower is better)
Translates to: GCSFSQVDSEES*FSRASMSAWMV
Trigger: AACCATCCATGCAGACATGGAGGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTCTGGAATCCGGCCCCTaGTCCTTACTGCTGCTGCTT +
Preference number: 3 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCLESGP*SLLLLL
Trigger: AAGCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAG...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 3 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSEEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGAAGTCCGACACAGTGTaGGGCATGGGGCCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: APVFKFRETLEVPLTVHLKSDTV*GMGPWV
Trigger: CACCCAGGGCCCCATGCCCAACACTGTGTCGGACTT...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496197.5
3UTR TCA 72 bp TTAGCACTGCGTGTTCTTCAGGAGAGAAGTCCTGAGTaGGGAGGCCCAGCTGTTCTCCAGATCCAACTCCTC +
Preference number: 3 (lower is better)
Translates to: LALRVLQERSPE*GGPAVLQIQLL
Trigger: GAGGAGTTGGATCTGGAGAACAGCTGGGCCTCCTCACTCAGGACTTCTCTCCTGAAGAACACGCAGTGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp CCAGACTTTTCCCCATTCTTGCATCTGGCCTGTGCTTaGGCAGGACCTCGGGTGAAGGATGATCTTGGAATC +
Preference number: 3 (lower is better)
Translates to: PDFSPFLHLACA*AGPRVKDDLGI
Trigger: GATTCCAAGATCATCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 3 (lower is better)
Translates to: APVFKFRETLEVPLTVHLEEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCGCATCTGGCCTGTGCTaGGGCAGGACCTCGGGTGAA +
Preference number: 3 (lower is better)
Translates to: CLREHQDTWASFFVCHKCASGLC*GRTSGE
Trigger: TTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGC...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp GGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATaGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTT +
Preference number: 3 (lower is better)
Translates to: GLVTSVAYSYDT*VEARVTRVLVL
Trigger: AAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGCCCACCTTCCCAGGCTaGAGGGAGGTAGGCACCTGG +
Preference number: 3 (lower is better)
Translates to: HVIEQETEAHKECLREHQPTFPG*REVGTW
Trigger: CCAGGTGCCTACCTCCCTCAAGCCTGGGAAGGTGGG...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
3UTR-3UTR CAA 90 bp TTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 3 (lower is better)
Translates to: FDWGHPALPMCGQGAESLPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...CAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCCTTGGAATCACCCTTTaGTCAGCCCCAGGAAGGAGT +
Preference number: 3 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGLGITL*SAPGRS
Trigger: ACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAG...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAGTCACTGATAGGATGTaGAGACTTGGAGATCAGGAC +
Preference number: 3 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSVTDRM*RLGDQD
Trigger: GTCCTGATCTCCAAGTCTCAACATCCTATCAGTGAC...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 3 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
3UTR-3UTR CAA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGCTTGGAATCACCCTTTaGTCAGCCCCAGGAAGGAGT +
Preference number: 3 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWLGITL*SAPGRS
Trigger: ACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAG...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCACTTGGAATCACCCTTTaGTCAGCCCCAGGAAGGAGT +
Preference number: 3 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPALGITL*SAPGRS
Trigger: ACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAG...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAAGGAGCAGCTCCTCTTaGCCTCTGAGTAGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPRSSSS*PLSSPH
Trigger: GTGGGGACTACTCAGAGGCAAAGAGGAGCTGCTCCT...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGGAGCAGCTCCTCTTaGCCTCTGAGTAGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNRSSSS*PLSSPH
Trigger: GTGGGGACTACTCAGAGGCAAAGAGGAGCTGCTCCT...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR TCA 72 bp AGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTCCTaGGTGAGGAGGCCCAGCTGTTCTCCAGATCCAACT +
Preference number: 3 (lower is better)
Translates to: SFSTACSSGEKS*VRRPSCSPDPT
Trigger: AGTTGGATCTGGAGAACAGCTGGGCCTCCTCACTCAGGACTTCTCTCCTGAAGAACACGCAGTGCTAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp GCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTaGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: ARVTRVLVLSFD*GHPALPMCGQG
Trigger: TCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp GAGGAGTCCTGGTTCAGCCGAGCCTCCATGTCTGCATaGATGGTTATGACCCTGATTGTTTTTGGAAACAGC +
Preference number: 3 (lower is better)
Translates to: EESWFSRASMSA*MVMTLIVFGNS
Trigger: GCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCTGAACCAGGACTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 3 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEEKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 3 (lower is better)
Translates to: RHLTFIPISEWAASLRFKKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 3 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEEPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGTCACTGATAGGATGTaGAGACTTGGAGATCAGGAC +
Preference number: 3 (lower is better)
Translates to: RHLTFIPISEWAASLRFKVTDRM*RLGDQD
Trigger: GTCCTGATCTCCAAGTCTCAACATCCTATCAGTGAC...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp AAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCCATCTGGGGCCAACAG +
Preference number: 3 (lower is better)
Translates to: KCQLLSLSSERH*RFPLLSIWGQQ
Trigger: CTGTTGGCCCCAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
3UTR TCA 72 bp ATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGTTaGGACTTGGAGATCAGGACCAGACTTTTCCCCATT +
Preference number: 3 (lower is better)
Translates to: MCGQGAESLIGC*DLEIRTRLFPI
Trigger: AATGGGGAAAAGTCTGGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGACTCTGCTCCCTGACCACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp AGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATaGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGA +
Preference number: 3 (lower is better)
Translates to: SGSCIPRVLFEP*KQNRDCLASLR
Trigger: TCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 3 (lower is better)
Translates to: VSENTRTPGLLSLSVINAPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR-3UTR CAA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTGACTTTTCCCCATTCTaGCATCTGGCCTGTGCTTGG +
Preference number: 3 (lower is better)
Translates to: ALGKSSSVLALRVLQERSDFSPF*HLACAW
Trigger: CCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTC...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR-3UTR CAA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACGTCACTGATAGGATGTaGAGACTTGGAGATCAGGAC +
Preference number: 3 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNVTDRM*RLGDQD
Trigger: GTCCTGATCTCCAAGTCTCAACATCCTATCAGTGAC...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR CCA 72 bp CCAAGAAGTCTTTATTTTCCCACTTGGTTACTGTTCTaGAGCTTGTACCCTCTGAGCTCTGAGATGGGGTTG +
Preference number: 3 (lower is better)
Translates to: PRSLYFPTWLLF*SLYPLSSEMGL
Trigger: CAACCCCATCTCAGAGCTCAGAGGGTACAAGCTCCAGAACAGTAACCAAGTGGGAAAATAAAGACTTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
3UTR GCA 72 bp CAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGTTCAGAGAGACATTGG +
Preference number: 3 (lower is better)
Translates to: QDTWASFFVCHK*QLLSLSSERHW
Trigger: CCAATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
3UTR CCA 72 bp CATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTaGAAACAGCCAAGCTCTCTAGGTGTACTCAGCAAA +
Preference number: 3 (lower is better)
Translates to: HVCMDGYDPDCF*KQPSSLGVLSK
Trigger: TTTGCTGAGTACACCTAGAGAGCTTGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGCCCAACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: AAVSGLSSTSATRRSRGPTIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...TGGGCCCCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp ATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: IGPGWAAVSGLSSTSATRTIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...CCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GWAAVSGLSSTSATRRSRREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...CCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAACTGCTGCTGCTTCCTaGGCCACCGGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ARGGRLSPGSPPPLPLGATAAAS*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGAAGCAGCAGCAGT...TGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462815.5
CDS-3UTR CCA 90 bp GCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGCCCACCAGTTGCTTGGGGCTaGGTGGCTGGCGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: AAVSGLSSTSATRRSRGPPVAWG*VAGAEG
Trigger: CCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGG...TGGGCCCCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAAGGAGTGGCCAGTGTTaGAGACCTGGAATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ARGGRLSPGSPPPLPLGARSGQC*RPGIRP
Trigger: GGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCT...TGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGCGGAGGCTGGGTCATaGCTGCCCCCAAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: GWAAVSGLSSTSATRRSRAEAGS*LPPKTR
Trigger: CCTTGTCTTTGGGGGCAGCCATGACCCAGCCTCCGC...CCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CCCAGGCTTGAGGGAGGTAGGCACCTGGGCCACCGGAGGGTGGCAGGGGTCAGGAGTCCGACACAGTGTTaGGCATGGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PRLEGGRHLGHRRVAGVRSPTQC*AWGPGW
Trigger: CCACCCAGGGCCCCATGCCCAACACTGTGTCGGACT...CCTGACCCCTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCTCAAGCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGCCCACAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 4 (lower is better)
Translates to: AAVSGLSSTSATRRSRGPQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...TGGGCCCCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CTGCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCCTGTGGCCCCCAGGCTaGCTCTTGCCAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LQWTTIGPGWAAVSGLSSLWPPG*LLPAVC
Trigger: ACAGACAGCTGGCAAGAGGCAGCCTGGGGGCCACAG...GGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGCCCATGTCCTTACTGCTGCTaGTTCCTGGGCCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: AAVSGLSSTSATRRSRGPCPYCC*FLGHRR
Trigger: CCTCCGGTGGCCCAGGAAGCAGCAGCAGTAAGGACA...TGGGCCCCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462815.5
CDS-3UTR TCA 90 bp GCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGCCCAAGGCTCACTCAGCCATaGGGTCTGCTGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AAVSGLSSTSATRRSRGPRLTQP*GLLKQL
Trigger: CAGCTGCTTCAGCAGACCTCATGGCTGAGTGAGCCT...TGGGCCCCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: RELVSRQLSGAACLVMRHLGGWR*RAQRVR
Trigger: CCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAG...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCATTGCCCTCTCGGAGCTaGGTGAGCATGACAATGAGG +
Preference number: 4 (lower is better)
Translates to: ARGGRLSPGSPPPLPLGALPSRS*VSMTMR
Trigger: CCTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAA...TGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCCCCAGGCTGCCTCTTaGCAGCTGTCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: AVDYDRPGVGGCLRALLHPQAAS*QLSVCL
Trigger: CAGACAGACAGACAGCTGGCAAGAGGCAGCCTGGGG...GTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTGCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCATCCCTGCACTGCAGTaGACTACGATAGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LQWTTIGPGWAAVSGLSSIPALQ*TTIGPG
Trigger: CCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT...GGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTGCCACTAGGCGCAGCAGGGGCCCAGCTGATTCTGGTGTCTGATGGTCTGGCCGCAGGGGTCAGGGGCTaGGTTCCTCAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPLGAAGAQLILVSDGLAAGVRG*VPQAAG
Trigger: GCCAGCTGCCTGAGGAACCCAGCCCCTGACCCCTGC...GGCCAGACCATCAGACACCAGAATCAGCTGGGCCCCTGCTGCGCCTAGTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGTGGGCCACCGGAGGGTaGCAGGGGTCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAACLVMRHLTFIPISEWWATGG*QGSGAG
Trigger: CCCAGCCCCTGACCCCTGCCACCCTCCGGTGGCCCA...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATGGGCACAGCTCGCCTaGCCCCCAGCTCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QRAGIKAAVRGGVPGDAAWAQLA*PPALCC
Trigger: ACAGCACAGAGCTGGGGGTCAGGCGAGCTGTGCCCA...TGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR TCA 90 bp CCCAGGCTTGAGGGAGGTAGGCACCTGGGCCACCGGAGGGTGGCAGGGGTCAGGCCTGGTACTGGATGGTaGGCTGCCGCACAGTGTATT +
Preference number: 4 (lower is better)
Translates to: PRLEGGRHLGHRRVAGVRPGTGW*AAAQCI
Trigger: AATACACTGTGCGGCAGCTCACCATCCAGTACCAGG...CCTGACCCCTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCTCAAGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGCCTGGTACTGGATGGTaGGCTGCCGCACAGTGTATT +
Preference number: 4 (lower is better)
Translates to: GWAAVSGLSSTSATRRSRPGTGW*AAAQCI
Trigger: AATACACTGTGCGGCAGCTCACCATCCAGTACCAGG...CCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp CCCAGGCTTGAGGGAGGTAGGCACCTGGGCCACCGGAGGGTGGCAGGGGTCAGGTGCTGCTGCTTCCTGTaGCTGCAAGCACCACTAAGG +
Preference number: 4 (lower is better)
Translates to: PRLEGGRHLGHRRVAGVRCCCFL*LQAPLR
Trigger: CCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCA...CCTGACCCCTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCTCAAGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGACACTTCCTCTTaGCACACCATCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGWAAVSGLSSTSATRRSRDTSS*HTISQK
Trigger: CTTCTGGGAGATGGTGTGGCAAGAGGAAGTGTCCCT...GCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCATACTGGATGGTGAGCTaGCGCACAGTGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: ARGGRLSPGSPPPLPLGAYWMVS*RTVYSG
Trigger: CCCAGAATACACTGTGCGGCAGCTCACCATCCAGTA...TGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCATGCAGGAACTGGTACTaGTCTGCCGTCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: ARGGRLSPGSPPPLPLGACRNWY*SAVWII
Trigger: GATGATCCAGACGGCAGAGCAGTACCAGTTCCTGCA...TGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCTGCAGGAACTGGTACTaGTCTGCCGTCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: PGWAAVSGLSSTSATRRSCRNWY*SAVWII
Trigger: GATGATCCAGACGGCAGAGCAGTACCAGTTCCTGCA...GCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAAGACAGACACGGCTCTaGGGATTTGGCAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: ARGGRLSPGSPPPLPLGARQTRL*GFGKMV
Trigger: GACCATCTTGCCAAATCCCCAGAGCCGTGTCTGTCT...TGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCTGGTGTCTGATGGTCTaGCCAGGCCGAAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: PGWAAVSGLSSTSATRRSWCLMV*PGRKED
Trigger: ATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCA...GCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCTGGGCCACCGGAGGGTaGCAGGGGTCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLPVTASTTKEALLPHTWATGG*QGSGAG
Trigger: CCCAGCCCCTGACCCCTGCCACCCTCCGGTGGCCCA...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCCTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCLGGWR*RAQRVR
Trigger: CCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAG...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGCCCACCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: AAVSGLSSTSATRRSRGPPGLRG*QSLKGS
Trigger: AGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGG...TGGGCCCCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp ATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGTTGCCCTCTCGGAGCTaGGTGAGCATGACAATGAGG +
Preference number: 4 (lower is better)
Translates to: IGPGWAAVSGLSSTSATRLPSRS*VSMTMR
Trigger: CCTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAA...CCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGGGGGCTGACAAAGTTTaGAGGGATCTTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GWAAVSGLSSTSATRRSRGADKV*RDLLSC
Trigger: GCAGGAGAGAAGATCCCTTCAAACTTTGTCAGCCCC...CCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000480836.5
CDS-3UTR GCA 90 bp CAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCACATTCTGCCCTCCTGTaGCTGCTGCCGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: QRAGIKAAVRGGVPGDAAHSALL*LLPLPP
Trigger: TGGTGGCAGCGGCAGCAGGCACAGGAGGGCAGAATG...TGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp CTGCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCAGGCTGGGTCATGGCTaGCCCCAAAGACAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LQWTTIGPGWAAVSGLSSRLGHG*PQRQGQ
Trigger: TTGACCTTGTCTTTGGGGGCAGCCATGACCCAGCCT...GGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CCCAGGCTTGAGGGAGGTAGGCACCTGGGCCACCGGAGGGTGGCAGGGGTCAGGAGGGACACTTCCTCTTaGCACACCATCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRLEGGRHLGHRRVAGVRRDTSS*HTISQK
Trigger: CTTCTGGGAGATGGTGTGGCAAGAGGAAGTGTCCCT...CCTGACCCCTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCTCAAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCAGGTACTGGATGGTGAGCTaGCGCACAGTGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: GWAAVSGLSSTSATRRSRYWMVS*RTVYSG
Trigger: CCCAGAATACACTGTGCGGCAGCTCACCATCCAGTA...CCTGCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCAAGTCCGACACAGTGTTaGGCATGGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QRAGIKAAVRGGVPGDAASPTQC*AWGPGW
Trigger: CCACCCAGGGCCCCATGCCCAACACTGTGTCGGACT...TGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCACACTCTTTCATGTCCTaGATGCGGATCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ARGGRLSPGSPPPLPLGAHSFMS*MRIWKG
Trigger: ACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTG...TGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTCGCTCTTCCTGGTACTaGATGGTGAGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSRSSWY*MVSCRT
Trigger: TGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLPVTASTTKEALLPHTTIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: PGWAAVSGLSSTSATRRSLSSRS*HTIPRM
Trigger: CATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG...GCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTCTGCCGGCAGGGGTCAGGGGCTaGGTTCCTCAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGLHTGPKCGAGTGTALPAGVRG*VPQAAG
Trigger: GCCAGCTGCCTGAGGAACCCAGCCCCTGACCCCTGC...CGGCAGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCCCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VDYDRPGVGGCLRALLHLPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...GAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AVDYDRPGVGGCLRALLHPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...GTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR TCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATAGCCATGAGGTCTGCTaGAGCAGCTGTGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RELVSRQLSGAACLVMRHSHEVC*SSCGPQ
Trigger: CTGGGGGCCACAGCTGCTTCAGCAGACCTCATGGCT...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000495688.5
CDS-3UTR TCA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGACTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LFPILASGLCLGRTSGEGLGGWR*RAQRVR
Trigger: CCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAG...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTCTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCLGGWR*RAQRVR
Trigger: CCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAG...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTCCTGGTACTGGATGGTaGGCTGCCGCACAGTGTATT +
Preference number: 4 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSPGTGW*AAAQCI
Trigger: AATACACTGTGCGGCAGCTCACCATCCAGTACCAGG...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp CTGCCACTAGGCGCAGCAGGGGCCCAGCTGATTCTGGTGTCTGATGGTCTGGCCCGGGCTTTCAGCTGTTaGCAGCCAATTCGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: LPLGAAGAQLILVSDGLARAFSC*QPIRVA
Trigger: CGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCG...GGCCAGACCATCAGACACCAGAATCAGCTGGGCCCCTGCTGCGCCTAGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATGGGCGGCGTGCCTGGTaGTGCGGCATCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: RELVSRQLSGAACLVMRHGRRAW*CGILPS
Trigger: TGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCC...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGACCCTCCGCCCCTCCTTaGTGCCACCCACGCACACCC +
Preference number: 4 (lower is better)
Translates to: LFPILASGLCLGRTSGEGPSAPP*CHPRTP
Trigger: GGGTGTGCGTGGGTGGCAGCAAGGAGGGGCGGAGGG...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp ATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGGCCGAAAAGAGGATGTaGTTTACTGACCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: IGPGWAAVSGLSSTSATRAEKRM*FTDRRS
Trigger: AGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGC...CCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACAGGGCCAAAGTGTGGTaGAGGAACTGGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: AVDYDRPGVGGCLRALLHRAKVW*RNWYCS
Trigger: AGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCT...GTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCGTGGGGCTGTGCAGTTaGTTCCCTCTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QLSGAACLVMRHLTFIPIVGLCS*FPLGWL
Trigger: GAGCCAGCCCAGAGGGAAGCAACTGCACAGCCCCAC...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCCGGTCCTTGGAGGCGTaGCCAGGGATGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QLSGAACLVMRHLTFIPIRSLEA*PGMSRS
Trigger: AGACCTGGACATCCCTGGCCACGCCTCCAAGGACCG...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CTGCCACTAGGCGCAGCAGGGGCCCAGCTGATTCTGGTGTCTGATGGTCTGGCCATCCCTGCACTGCAGTaGACTACGATAGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LPLGAAGAQLILVSDGLAIPALQ*TTIGPG
Trigger: CCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT...GGCCAGACCATCAGACACCAGAATCAGCTGGGCCCCTGCTGCGCCTAGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTTGGGCCACCGGAGGGTaGCAGGGGTCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAVGTQYPECPLLLGLSAWATGG*QGSGAG
Trigger: CCCAGCCCCTGACCCCTGCCACCCTCCGGTGGCCCA...AGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp TGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WSGQAEKRMCFTDRRSSWREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...CCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCTCTGCCCACTGCCCCTaGCTGACCTTGGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLPVTASTTKEALLPHTSAHCP*LTLAGS
Trigger: GGAGCCTGCCAAGGTCAGGCAGGGGCAGTGGGCAGA...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp ATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCTTTCATGTCCTGGATaGGGATCTGGAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: IGPGWAAVSGLSSTSATRLSCPG*GSGRVH
Trigger: ATGGACCCTTCCAGATCCGCATCCAGGACATGAAAG...CCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATGTTCACAGAGCAGATaGGTTCTACGGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QRAGIKAAVRGGVPGDAACSQSR*VLRPPG
Trigger: CCCTGGGGGCCGTAGAACCCATCTGCTCTGTGAACA...TGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGAGTCCGACACAGTGTTaGGCATGGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GAACLVMRHLTFIPISEWSPTQC*AWGPGW
Trigger: CCACCCAGGGCCCCATGCCCAACACTGTGTCGGACT...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLLLPVTASTTKEALLPTIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCAGCCATGAGGTCTGCTaGAGCAGCTGTGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: EGCSFSQVDSEESWFSRASHEVC*SSCGPQ
Trigger: CTGGGGGCCACAGCTGCTTCAGCAGACCTCATGGCT...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000495688.5
CDS-3UTR TCA 90 bp AGATCAGGACCAGACTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: RSGPDFSPFLHLACAWAGLGGWR*RAQRVR
Trigger: CCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAG...TCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTCTGGTCCTGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGCAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 4 (lower is better)
Translates to: GAACLVMRHLTFIPISEWQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGATCGTCTCCACGCCTGTaGCACGGCCCAGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LFPILASGLCLGRTSGEGSSPRL*HGPALH
Trigger: GTGGAGAGCTGGGCCGTGGCACAGGCGTGGAGACGA...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGGCTGCCTCCCGCCTGTaGCCTTCTGGGGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RMILESPFCQPQEGVAGVAASRL*PSGAQG
Trigger: GCCTTGGGCCCCAGAAGGGCACAGGCGGGAGGCAGC...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp CCGGCGCTCTTCCTGGTACTGGATGGTGAGCTGCCGCACAGTGTATTCTGGGCACCCCAGGCTGCCTCTTaGCAGCTGTCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PALFLVLDGELPHSVFWAPQAAS*QLSVCL
Trigger: CAGACAGACAGACAGCTGGCAAGAGGCAGCCTGGGG...TGCCCAGAATACACTGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCCTGTGGCCCCCAGGCTaGCTCTTGCCAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: EGCSFSQVDSEESWFSRALWPPG*LLPAVC
Trigger: ACAGACAGCTGGCAAGAGGCAGCCTGGGGGCCACAG...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000495688.5
CDS-3UTR CCA 90 bp TGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGGCGGAGGCTGGGTCATaGCTGCCCCCAAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: WSGQAEKRMCFTDRRSSWAEAGS*LPPKTR
Trigger: CCTTGTCTTTGGGGGCAGCCATGACCCAGCCTCCGC...CCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CGCTCTTCCTGGTACTGGATGGTGAGCTGCCGCACAGTGTATTCTGGGCACTCTTTGCTTGGGGCTGGGTaGCTGGCGCTGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSSWYWMVSCRTVYSGHSLLGAG*LALKGP
Trigger: TGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAA...AGAGTGCCCAGAATACACTGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTGTATCGGTCCTTaGAGGCGTGGCCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: QRAGIKAAVRGGVPGDAASCIGP*RRGQGC
Trigger: ACATCCCTGGCCACGCCTCCAAGGACCGATACAAGA...TGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCCCCCATTCTTGCATCTaGCCTGTGCTTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: QLSGAACLVMRHLTFIPIPHSCI*PVLGQD
Trigger: GTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGG...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCACTCCCTAAGAGTAGTTaGTGGGAGTGGCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: QRAGIKAAVRGGVPGDAALPKSS*WEWPAT
Trigger: GGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAG...TGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCCCCACCGAGCCTCATTaGCATAGACAGTCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QLSGAACLVMRHLTFIPIPTEPH*HRQSCL
Trigger: GAGGCACGACTGTCTATGCCAATGAGGCTCGGTGGG...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCAGCCATGAGGTCTGCTaGAGCAGCTGTGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LVSDGLARPKRGCALLTGSHEVC*SSCGPQ
Trigger: CTGGGGGCCACAGCTGCTTCAGCAGACCTCATGGCT...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp CTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGCCATGAGGTCTGCTaGAGCAGCTGTGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPVTASTTKEALLPHTNPSHEVC*SSCGPQ
Trigger: CTGGGGGCCACAGCTGCTTCAGCAGACCTCATGGCT...TGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGAAAGTGTAGGGTaGCCTCCCGGGGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GAACLVMRHLTFIPISEWAESVG*PPGVCS
Trigger: TGAACACACCCCGGGAGGTCACCCTACACTTTCTGC...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGCGGGCTTTCAGCTGTTaGCAGCCAATTCGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPRRAFSC*QPIRVA
Trigger: CGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCG...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGCGGGCTTTCAGCTGTTaGCAGCCAATTCGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: WSGQAEKRMCFTDRRSSWRAFSC*QPIRVA
Trigger: CGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCG...CCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCCCATGTCCTCTTCGCTaGTGGGGTGCCTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCPCPLR*WGAWMP
Trigger: AGGCATCCAGGCACCCCAGCAGCGAAGAGGACATGG...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTCCACCAGGGGTCGGCTaGCTCCCGCCTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCPPGVG*LPPVPF
Trigger: GAAGGGCACAGGCGGGAGGCAGCCGACCCCTGGTGG...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp CTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCACTGTGGCCCCCAGGCTaGCTCTTGCCAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LPVTASTTKEALLPHTNPLWPPG*LLPAVC
Trigger: ACAGACAGCTGGCAAGAGGCAGCCTGGGGGCCACAG...TGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCCTTGCATCTGGCCTGTaGTTGGGCAGGACCTCGGGT +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCLASGL*LGRTSG
Trigger: ACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAG...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCCCTTGTCCTTACTGCTaGTGCTTCCTGGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCPCPYC*CFLGHR
Trigger: CCGGTGGCCCAGGAAGCAGCAGCAGTAAGGACAAGG...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462815.5
CDS-3UTR CCA 90 bp GTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGGCGGAGGCTGGGTCATaGCTGCCCCCAAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: VPGDAASYLHPHLRMGSQAEAGS*LPPKTR
Trigger: CCTTGTCTTTGGGGGCAGCCATGACCCAGCCTCCGC...CTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCGGAGGCTGGGTCATaGCTGCCCCCAAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: LVSDGLARPKRGCALLTGAEAGS*LPPKTR
Trigger: CCTTGTCTTTGGGGGCAGCCATGACCCAGCCTCCGC...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGTTTTCAGGCGGAGGCTaGGTCATGGCTGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GAACLVMRHLTFIPISEWFSGGG*VMAAPK
Trigger: TTTGGGGGCAGCCATGACCCAGCCTCCGCCTGAAAA...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGTACTGGATGTTGCTTGGGGCTGGGTaGCTGGCGCTGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QAEKRMCFTDRRSSWYWMLLGAG*LALKGP
Trigger: TGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAA...CATCCAGTACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCACGGTCCTTGGAGGCGTaGCCAGGGATGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LPVTASTTKEALLPHTNPRSLEA*PGMSRS
Trigger: AGACCTGGACATCCCTGGCCACGCCTCCAAGGACCG...TGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCCGGTCCTTGGAGGCGTaGCCAGGGATGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LVSDGLARPKRGCALLTGRSLEA*PGMSRS
Trigger: AGACCTGGACATCCCTGGCCACGCCTCCAAGGACCG...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGCGCTCTTCCTGGTACTaGATGGTGAGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: GAACLVMRHLTFIPISEWRSSWY*MVSCRT
Trigger: TGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp TGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WSGQAEKRMCFTDRRSSWDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...CCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLPVTASTTKEALLPHTDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEETIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCATCCCTGCACTGCAGTaGACTACGATAGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCIPALQ*TTIGPG
Trigger: CCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTGCAGGGGTCAGGGGCTaGGTTCCTCAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLAGVRG*VPQAAG
Trigger: GCCAGCTGCCTGAGGAACCCAGCCCCTGACCCCTGC...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCCATCTGGCCTGTGCTTaGGCAGGACCTCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLLPVTASTTKEALLPHTHLACA*AGPRVK
Trigger: CTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATG...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS-3UTR CCA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCCTCCCTAAGAGTAGTTaGTGGGAGTGGCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: QLSGAACLVMRHLTFIPILPKSS*WEWPAT
Trigger: GGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAG...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTGGGGAGGTGGAGGTGTaGGCAAGTCCATCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCGEVEV*ASPSPR
Trigger: CCTTGGGGATGGACTTGCCCACACCTCCACCTCCCC...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGTGTTGGAGCTGGTTaGGCAGCCAGGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSSVGAG*AARQAG
Trigger: GCCCGCCTGCCTGGCTGCCCAACCAGCTCCAACACT...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367279.8
3UTR CAA 72 bp CTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGC +
Preference number: 4 (lower is better)
Translates to: LGPTEEAEEWPV*KTWNPAPCPYC
Trigger: GCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTCCATGCCTCACAATGTaGAGGAAAGGGCCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCPCLTM*RKGPGP
Trigger: TGGCCCCGGCCCTTTCCTTCACATTGTGAGGCATGG...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR TCA 90 bp CTGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTAGCCATGAGGTCTGCTaGAGCAGCTGTGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LSSRSWHTIPRMSTSPRASHEVC*SSCGPQ
Trigger: CTGGGGGCCACAGCTGCTTCAGCAGACCTCATGGCT...AGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGAGGCTCACTCAGCCATaGGGTCTGCTGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPRRLTQP*GLLKQL
Trigger: CAGCTGCTTCAGCAGACCTCATGGCTGAGTGAGCCT...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp CTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCACAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 4 (lower is better)
Translates to: LPVTASTTKEALLPHTNPQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...TGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTCTGCCGTGCTGCTGCTTCCTGTaGCTGCAAGCACCACTAAGG +
Preference number: 4 (lower is better)
Translates to: AGLHTGPKCGAGTGTALPCCCFL*LQAPLR
Trigger: CCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCA...CGGCAGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCTCCTCTTTGCCTCTaGGTAGTCCCCACATGTTCC +
Preference number: 4 (lower is better)
Translates to: GAACLVMRHLTFIPISEWAPLCL*VVPTCS
Trigger: GGAACATGTGGGGACTACTCAGAGGCAAAGAGGAGC...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCGGAGCTTGTACCCTCTaGGCTCTGAGATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCGACTL*ALRWGW
Trigger: CCAACCCCATCTCAGAGCTCAGAGGGTACAAGCTCC...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCACACGCACACCCCAGCTaGATTCTGCCCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSHAHPS*ILPSCA
Trigger: GGCACAGGAGGGCAGAATGCAGCTGGGGTGTGCGTG...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCAGAAGGAGGCTCCCATaGCAGGCCAGGTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: EGCSFSQVDSEESWFSRARRRLP*QARFAL
Trigger: GAGTGCAAACCTGGCCTGGCATGGGAGCCTCCTTCT...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCCCGCCTGTGCCCTTCTaGGGCCCAAGGCCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCPPVPF*GPRPRS
Trigger: GGAACGGGGCCTTGGGCCCCAGAAGGGCACAGGCGG...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp TGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGTTTTCAGGCGGAGGCTaGGTCATGGCTGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: WSGQAEKRMCFTDRRSSWFSGGG*VMAAPK
Trigger: TTTGGGGGCAGCCATGACCCAGCCTCCGCCTGAAAA...CCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp TCCTCGGGCTTTCAGCTGTTGACAGCCAATTCGCGTGGCGATGAAGCAGCCCGTTTTTCAGGCGGAGGCTaGGTCATGGCTGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SSGFQLLTANSRGDEAARFSGGG*VMAAPK
Trigger: TTTGGGGGCAGCCATGACCCAGCCTCCGCCTGAAAA...ACGGGCTGCTTCATCGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTGACAGCCCAGTTGCTTGGGGCTaGGTGGCTGGCGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GTQYPECPLLLGLSAVDSPVAWG*VAGAEG
Trigger: CCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGG...GCTGTCAACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCACGGTCCTTGGAGGCGTaGCCAGGGATGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSRSLEA*PGMSRS
Trigger: AGACCTGGACATCCCTGGCCACGCCTCCAAGGACCG...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTATCCCTGCACTGCAGTaGACTACGATAGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCIPALQ*TTIGPG
Trigger: CCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACTGGGCCACCGGAGGGTaGCAGGGGTCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNWATGG*QGSGAG
Trigger: CCCAGCCCCTGACCCCTGCCACCCTCCGGTGGCCCA...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTGGGCCACCGGAGGGTaGCAGGGGTCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASWATGG*QGSGAG
Trigger: CCCAGCCCCTGACCCCTGCCACCCTCCGGTGGCCCA...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGAGTAGTTGGTGGGAGTaGCCAGCAACCATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GAACLVMRHLTFIPISEWSSWWE*PATMEA
Trigger: TGCCTCCATGGTTGCTGGCCACTCCCACCAACTACT...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCGACAGTGAGGAGTCCTaGTTCAGCCGAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: EGCSFSQVDSEESWFSRADSEES*FSRASM
Trigger: CATGGAGGCTCGGCTGAACCAGGACTCCTCACTGTC...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCGAGGATGTGCTTTACTaGCCGGCGCTCTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: EGCSFSQVDSEESWFSRAEDVLY*PALFLV
Trigger: TACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTC...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGCAATTCGCGTGGCGATaGAGCAGCCCGTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: RMILESPFCQPQEGVAGVQFAWR*SSPSGQ
Trigger: TTGGCCGGACGGGCTGCTTCATCGCCACGCGAATTG...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTCAATTCGCGTGGCGATaGAGCAGCCCGTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLQFAWR*SSPSGQ
Trigger: TTGGCCGGACGGGCTGCTTCATCGCCACGCGAATTG...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGTGCTGCTGCTTCCTGTaGCTGCAAGCACCACTAAGG +
Preference number: 4 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMCCCFL*LQAPLR
Trigger: CCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCA...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS-3UTR TCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCTGCTGCTGCTTCCTGTaGCTGCAAGCACCACTAAGG +
Preference number: 4 (lower is better)
Translates to: LLLPVTASTTKEALLPHTCCCFL*LQAPLR
Trigger: CCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCA...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCGGGCAGGACCTCGGGTaGAGGATGATCTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: EGCSFSQVDSEESWFSRAGQDLG*RMILES
Trigger: TGATTCCAAGATCATCCTTCACCCGAGGTCCTGCCC...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGACTCTCAGGTAGACAGTaGGGAGTCCTGGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: LFPILASGLCLGRTSGEGLSGRQ*GVLVQP
Trigger: CGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAG...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCATGTGGCGTTCAGTCCTaGGGTAGACCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSCGVQS*GRPEVP
Trigger: GGGGACCTCAGGTCTACCTCAGGACTGAACGCCACA...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTTCAGGAGAGAAGTCCTaGGTGAGGAGGCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCSGEKS*VRRPSC
Trigger: ACAGCTGGGCCTCCTCACTCAGGACTTCTCTCCTGA...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGGCAGAGCCCAGCCGGTTCATaGTCGCTGCACGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VLQIQLLGGFHRELVSRQSPAGS*SLHASF
Trigger: AAAGGAGGCGTGCAGCGAGCATGAACCGGCTGGGCT...CTGCCTTGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCGTCACATCCAGCCGCTaGCTACTTGCTGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LLLLLPVTASTTKEALLPVTSSR*LLAGHS
Trigger: GCTGTGCCCAGCAAGTAGGCAGCGGCTGGATGTGAC...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCCTCCTGTGCCTGCTaGCGCTGCCACCAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHPSCAC*RCHQGS
Trigger: CGACCCCTGGTGGCAGCGGCAGCAGGCACAGGAGGG...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAGAGCCCCGCCTCTCCTaGAGTCGCACATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSEPRLS*SRTCFL
Trigger: CAAGAAGCATGTGCGACTGCAGGAGAGGCGGGGCTC...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CCGGCGCTCTTCCTGGTACTGGATGGTGAGCTGCCGCACAGTGTATTCTGGGCAGCCGAAAAGAGGATGTaGTTTACTGACCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PALFLVLDGELPHSVFWAAEKRM*FTDRRS
Trigger: AGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGC...TGCCCAGAATACACTGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp AGATCAGGACCAGACTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGAGTGGGGCTGTGCAGTTaGTTCCCTCTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RSGPDFSPFLHLACAWAGVGLCS*FPLGWL
Trigger: GAGCCAGCCCAGAGGGAAGCAACTGCACAGCCCCAC...TCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTCTGGTCCTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGCCCCTTGTCCTTACTaGTGCTGCTTCCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AAVGTQYPECPLLLGLSAAPCPY*CCFLGH
Trigger: GTGGCCCAGGAAGCAGCAGCAGTAAGGACAAGGGGC...AGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462815.5
CDS-3UTR CCA 90 bp AGATCAGGACCAGACTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGAGCGGAGGCTGGGTCATaGCTGCCCCCAAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: RSGPDFSPFLHLACAWAGAEAGS*LPPKTR
Trigger: CCTTGTCTTTGGGGGCAGCCATGACCCAGCCTCCGC...TCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTCTGGTCCTGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGCCAGTTGCTTGGGGCTaGGTGGCTGGCGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEEPVAWG*VAGAEG
Trigger: CCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGG...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGTCTTGTATCGGTCCTTaGAGGCGTGGCCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPRSCIGP*RRGQGC
Trigger: ACATCCCTGGCCACGCCTCCAAGGACCGATACAAGA...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGACACAGTGTTGGGCATaGGGCCCTGGGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMTQCWA*GPGWQC
Trigger: ACATTGCCACCCAGGGCCCCATGCCCAACACTGTGT...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCAGCAGGGGTCAGGGGCTaGGTTCCTCAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPAAGVRG*VPQAAG
Trigger: GCCAGCTGCCTGAGGAACCCAGCCCCTGACCCCTGC...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTGGAAACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTTGGGCCACCGGAGGGTaGCAGGGGTCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LETAKLSRCTQQMQGIVGWATGG*QGSGAG
Trigger: CCCAGCCCCTGACCCCTGCCACCCTCCGGTGGCCCA...ACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGTTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGCCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCAGCCCCAGGAAGGAGTaGCTGGAGTGGCTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCSPRKE*LEWLLE
Trigger: TTCTAGAAGCCACTCCAGCCACTCCTTCCTGGGGCT...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGGACAGTGAGGAGTCCTaGTTCAGCCGAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMDSEES*FSRASM
Trigger: CATGGAGGCTCGGCTGAACCAGGACTCCTCACTGTC...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCTTTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACAGCAGTGTTGGAGCTaGTTGGGCAGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SFDWGHPALPMCGQGAESQQCWS*LGSQAG
Trigger: GCCTGCCTGGCTGCCCAACCAGCTCCAACACTGCTG...TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR TCA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTCCTCCCAGAACCCTaGCATCTACTTAGAAGACTT +
Preference number: 4 (lower is better)
Translates to: RELVSRQLSGAACLVMRHLLPEP*HLLRRL
Trigger: AAGTCTTCTAAGTAGATGTCAGGGTTCTGGGAGGAG...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR TCA 90 bp CTGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTGCAGAAAGTGTAGGGTaGCCTCCCGGGGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSSRSWHTIPRMSTSPRAAESVG*PPGVCS
Trigger: TGAACACACCCCGGGAGGTCACCCTACACTTTCTGC...AGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TTCTGGGCACTCTTTCATGTCCTGGATGCGGATCTGGAAGGGTCCATAGGTTTCCAATTCGCGTGGCGATaGAGCAGCCCGTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: FWALFHVLDADLEGSIGFQFAWR*SSPSGQ
Trigger: TTGGCCGGACGGGCTGCTTCATCGCCACGCGAATTG...GAAACCTATGGACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTGCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGAAGGAGGAGGAATCCTaGGGTGTGGCGTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMKEEES*GVAFSP
Trigger: AGGACTGAACGCCACACCTCAGGATTCCTCCTCCTT...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCGAGAGAAGTCCTGAGTaGGGAGGCCCAGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLLLLPVTASTTKEALLPERSPE*GGPAVL
Trigger: GAGAACAGCTGGGCCTCCTCACTCAGGACTTCTCTC...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS-3UTR TCA 90 bp TTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGTGCTGCTGCTTCCTGTaGCTTCCCAGGCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: FDWGHPALPMCGQGAESLCCCFL*LPRLEG
Trigger: TCCCTCAAGCCTGGGAAGTCACAGGAAGCAGCAGCA...CAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495688.5
CDS-3UTR GCA 90 bp GTAGTGGACACATTTCTCCTTGCCCTCTCGGAGCTGAGTGAGCATGACAATGAGCTGTGGCCCCCAGGCTaGCTCTTGCCAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VVDTFLLALSELSEHDNELWPPG*LLPAVC
Trigger: ACAGACAGCTGGCAAGAGGCAGCCTGGGGGCCACAG...CTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAAGGAGAAATGTGTCCACTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCAGGCTGGGTCATGGCTaGCCCCAAAGACAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LVSDGLARPKRGCALLTGRLGHG*PQRQGQ
Trigger: TTGACCTTGTCTTTGGGGGCAGCCATGACCCAGCCT...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CGCTCTTCCTGGTACTGGATGGTGAGCTGCCGCACAGTGTATTCTGGGCACTCTAGGCTGGGTCATGGCTaGCCCCAAAGACAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: RSSWYWMVSCRTVYSGHSRLGHG*PQRQGQ
Trigger: TTGACCTTGTCTTTGGGGGCAGCCATGACCCAGCCT...AGAGTGCCCAGAATACACTGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGTACTGGATGGTGAGCTaGCGCACAGTGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPRYWMVS*RTVYSG
Trigger: CCCAGAATACACTGTGCGGCAGCTCACCATCCAGTA...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAGGGCCAAAGTGTGGTaGAGGAACTGGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLPVTASTTKEALLPHTRAKVW*RNWYCS
Trigger: AGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCT...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp TCCTCGGGCTTTCAGCTGTTGACAGCCAATTCGCGTGGCGATGAAGCAGCCCGTAGGGCCAAAGTGTGGTaGAGGAACTGGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSGFQLLTANSRGDEAARRAKVW*RNWYCS
Trigger: AGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCT...ACGGGCTGCTTCATCGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGATGCCAGGCCAGGTTTaGACTCTGTTTTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMMPGQV*TLFSLG
Trigger: CCCCAGTGAAAACAGAGTGCAAACCTGGCCTGGCAT...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CCA 90 bp CTGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTGTTCACAGAGCAGATaGGTTCTACGGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSSRSWHTIPRMSTSPRACSQSR*VLRPPG
Trigger: CCCTGGGGGCCGTAGAACCCATCTGCTCTGTGAACA...AGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462815.5
CDS-3UTR CCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCTTGCTTGGGGCTGGGTaGCTGGCGCTGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCLLGAG*LALKGP
Trigger: TGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAA...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCCCAGTTGCTTGGGGCTaGGTGGCTGGCGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCPVAWG*VAGAEG
Trigger: CCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGG...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCTCTTGTATCGGTCCTTaGAGGCGTGGCCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: LVSDGLARPKRGCALLTGSCIGP*RRGQGC
Trigger: ACATCCCTGGCCACGCCTCCAAGGACCGATACAAGA...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGAGACAGACACGGCTCTaGGGATTTGGCAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPRRQTRL*GFGKMV
Trigger: GACCATCTTGCCAAATCCCCAGAGCCGTGTCTGTCT...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp AGATCAGGACCAGACTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGAGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSGPDFSPFLHLACAWAGDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...TCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTCTGGTCCTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCTTTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCAATCCCTGCACTGCAGTaGACTACGATAGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SFDWGHPALPMCGQGAESIPALQ*TTIGPG
Trigger: CCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGGAT...TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTCTGCCGCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: AGLHTGPKCGAGTGTALPLSSRS*HTIPRM
Trigger: CATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG...CGGCAGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGGCAGGGGTCAGGGGCTaGGTTCCTCAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LREHQDTWASFFVCHKCQAGVRG*VPQAAG
Trigger: GCCAGCTGCCTGAGGAACCCAGCCCCTGACCCCTGC...CTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCGCAGGGGTCAGGGGCTaGGTTCCTCAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASAGVRG*VPQAAG
Trigger: GCCAGCTGCCTGAGGAACCCAGCCCCTGACCCCTGC...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: QLSGAACLVMRHLTFIPISSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGCATCTGGCCTGTGCTTaGGCAGGACCTCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RMILESPFCQPQEGVAGVHLACA*AGPRVK
Trigger: CTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATG...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGGCAGCCCCATTCTTGCATCTaGCCTGTGCTTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VLQIQLLGGFHRELVSRQPHSCI*PVLGQD
Trigger: GTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGG...CTGCCTTGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGAGTGGCCAGCAACCATaGAGGCAGGAGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RMILESPFCQPQEGVAGVSGQQP*RQEQLL
Trigger: GAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACT...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTAGTAGTTGGTGGGAGTaGCCAGCAACCATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCSSWWE*PATMEA
Trigger: TGCCTCCATGGTTGCTGGCCACTCCCACCAACTACT...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCACCCACCGAGCCTCATTaGCATAGACAGTCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSPTEPH*HRQSCL
Trigger: GAGGCACGACTGTCTATGCCAATGAGGCTCGGTGGG...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACTTCCCTGGGAATGGGTaGGGGGCCAGGCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNFPGNG*GARPSR
Trigger: TCGGGAAGGCCTGGCCCCTCACCCATTCCCAGGGAA...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR TCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGAGGCTCACTCAGCCATaGGGTCTGCTGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RMILESPFCQPQEGVAGVRLTQP*GLLKQL
Trigger: CAGCTGCTTCAGCAGACCTCATGGCTGAGTGAGCCT...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000495688.5
CDS-3UTR TCA 90 bp TCTTTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCAGCAGAAAGTGTAGGGTaGCCTCCCGGGGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SFDWGHPALPMCGQGAESAESVG*PPGVCS
Trigger: TGAACACACCCCGGGAGGTCACCCTACACTTTCTGC...TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTCTGCCGGGATGTAGTTGGCATTaGTGTAATCTCCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGLHTGPKCGAGTGTALPGCSWH*CNLRPP
Trigger: AGGAGGACGGAGATTACATCAATGCCAACTACATCC...CGGCAGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGTTGCCCTCTCGGAGCTaGGTGAGCATGACAATGAGG +
Preference number: 4 (lower is better)
Translates to: FDWGHPALPMCGQGAESLLPSRS*VSMTMR
Trigger: CCTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAA...CAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGGAGGATGTGCTTTACTaGCCGGCGCTCTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PQLAHNTQNVHFSSGFQLEDVLY*PALFLV
Trigger: TACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTC...CAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGGGGCAGGACCTCGGGTaGAGGATGATCTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: FDWGHPALPMCGQGAESLGQDLG*RMILES
Trigger: TGATTCCAAGATCATCCTTCACCCGAGGTCCTGCCC...CAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCGGGCGGCGTGCCTGGTaGTGCGGCATCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCGRRAW*CGILPS
Trigger: TGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCC...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCAGCCATGAGGTCTGCCTaGAAGACAGGGCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPAAMRSA*KTGPSA
Trigger: AGCGGAGGGCCCTGTCTTTCAGGCAGACCTCATGGC...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR TCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGGCTCACTCAGCCATaGGGTCTGCCTGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSRLTQP*GLPERQ
Trigger: CTGTCTTTCAGGCAGACCTCATGGCTGAGTGAGCCT...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR GCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGCTCCCTCAAAGCCCTTaGTGCTTCAAGCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMLPQSP*CFKPWE
Trigger: TTCCCAAGGCTTGAAGCAGCAAGGGCTTTGAGGGAG...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp TCCTCGGGCTTTCAGCTGTTGACAGCCAATTCGCGTGGCGATGAAGCAGCCCGTTCCTGCAGTCGCACATaGTTCTTGGCTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SSGFQLLTANSRGDEAARSCSRT*FLAGVF
Trigger: AAAAACGCCAGCCAAGAAGCATGTGCGACTGCAGGA...ACGGGCTGCTTCATCGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGTCCTGCAGTCGCACATaGTTCTTGGCTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPRSCSRT*FLAGVF
Trigger: AAAAACGCCAGCCAAGAAGCATGTGCGACTGCAGGA...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp TCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGTACGCCGAAAAGAGGATGTaGTTTACTGACCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SGQAEKRMCFTDRRSSWYAEKRM*FTDRRS
Trigger: AGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGC...GTACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CGCTCTTCCTGGTACTGGATGGTGAGCTGCCGCACAGTGTATTCTGGGCACTCTAGGGCCAAAGTGTGGTaGAGGAACTGGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RSSWYWMVSCRTVYSGHSRAKVW*RNWYCS
Trigger: AGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCT...AGAGTGCCCAGAATACACTGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGGAGATGGATGAGGGGTaGTCATTCTCTCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPREMDEG*SFSQVD
Trigger: GTCTACCTGAGAGAATGAGCACCCCTCATCCATCTC...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS-3UTR GCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCGGGCCTGTGGGGCTGTaGAGTTGCTTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASGPVGL*SCFPLG
Trigger: GCCCAGAGGGAAGCAACTGCACAGCCCCACAGGCCC...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TCAGGCAGCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCAGGGATCTTCTCTCCTaGAGTCGCACATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SGSWPAYRAKVWCRNWYCRDLLS*SRTCFL
Trigger: CAAGAAGCATGTGCGACTGCAGGAGAGAAGATCCCT...GCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGCTGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480836.5
CDS-3UTR CCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAGGGTGCCTGGATGCCTaGGACCTGAAGGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPGCLDA*DLKGGP
Trigger: GGGGCCACCCTTCAGGTCCCAGGCATCCAGGCACCC...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCCCGTTCCCTGGGAATaGGTGAGGGGCCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLPVPWE*VRGQAF
Trigger: GAAGGCCTGGCCCCTCACCCATTCCCAGGGAACGGG...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp GGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTGACAGCTTTTCAGGCGGAGGCTaGGTCATGGCTGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GTQYPECPLLLGLSAVDSFSGGG*VMAAPK
Trigger: TTTGGGGGCAGCCATGACCCAGCCTCCGCCTGAAAA...GCTGTCAACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCATTGCTTGGGGCTGGGTaGCTGGCGCTGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPLLGAG*LALKGP
Trigger: TGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAA...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCTTGCTTGGGGCTGGGTaGCTGGCGCTGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLLLGAG*LALKGP
Trigger: TGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAA...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCATCTTGTATCGGTCCTTaGAGGCGTGGCCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSSCIGP*RRGQGC
Trigger: ACATCCCTGGCCACGCCTCCAAGGACCGATACAAGA...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCCTCGGGCTTTCAGCTGTTGACAGCCAATTCGCGTGGCGATGAAGCAGCCCGTACGGCTCTGGGGATTTaGCAAGATGGTCTTGTATCG +
Preference number: 4 (lower is better)
Translates to: SSGFQLLTANSRGDEAARTALGI*QDGLVS
Trigger: CGATACAAGACCATCTTGCCAAATCCCCAGAGCCGT...ACGGGCTGCTTCATCGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTGACAGCCGCTCTTCCTGGTACTaGATGGTGAGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: GTQYPECPLLLGLSAVDSRSSWY*MVSCRT
Trigger: TGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG...GCTGTCAACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AVGTQYPECPLLLGLSAVDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...AACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp TTGGAAACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LETAKLSRCTQQMQGIVGREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...ACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGTTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTCCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: AAVGTQYPECPLLLGLSAPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...AGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCTGGCCTGCATACAGGGCCAAAGTGTGGTGCAGGAACTGGTACTGCTCTGCCGAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: AGLHTGPKCGAGTGTALPSSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...CGGCAGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCTGTATGCAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGCCCTTCCGATGTGTaGTCAGGGAGCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSSPSDV*SGSRVT
Trigger: AGTGACTCTGCTCCCTGACCACACATCGGAAGGGCT...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGAGCCCTTCCGATGTGTaGTCAGGGAGCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: FDWGHPALPMCGQGAESLSPSDV*SGSRVT
Trigger: AGTGACTCTGCTCCCTGACCACACATCGGAAGGGCT...CAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTCCTAAGAGTAGTTGGTaGGAGTGGCCAGCAACCATG +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCPKSSW*EWPATM
Trigger: CATGGTTGCTGGCCACTCCCACCAACTACTCTTAGG...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGATCCCCATCTCAGAATaGGCAGCCAGTCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: RGGVPGDAASYLHPHLRMIPISE*AASLRF
Trigger: GAATCTGAGACTGGCTGCCCATTCTGAGATGGGGAT...CATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCATCCCCATCTCAGAATaGGCAGCCAGTCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: LLLPVTASTTKEALLPHTIPISE*AASLRF
Trigger: GAATCTGAGACTGGCTGCCCATTCTGAGATGGGGAT...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS-3UTR CCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCGGGGAGGTGGAGGTGTaGGCAAGTCCATCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCGEVEV*ASPSPR
Trigger: CCTTGGGGATGGACTTGCCCACACCTCCACCTCCCC...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TCTTTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCATTGCCCTCTCGGAGCTaGGTGAGCATGACAATGAGG +
Preference number: 4 (lower is better)
Translates to: SFDWGHPALPMCGQGAESLPSRS*VSMTMR
Trigger: CCTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAA...TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGTGTATTCTGGGCACTCTTTCATGTCCTGGATGCGGATCTGGAAGGGTCCATACAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 4 (lower is better)
Translates to: SVFWALFHVLDADLEGSIQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...TATGGACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTGCCCAGAATACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCAATTCGCGTGGCGATaGAGCAGCCCGTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHQFAWR*SSPSGQ
Trigger: TTGGCCGGACGGGCTGCTTCATCGCCACGCGAATTG...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGTGTATTCTGGGCACTCTTTCATGTCCTGGATGCGGATCTGGAAGGGTCCATACGGGCTTTCAGCTGTTaGCAGCCAATTCGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: SVFWALFHVLDADLEGSIRAFSC*QPIRVA
Trigger: CGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCG...TATGGACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTGCCCAGAATACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCAAGGAGTGGCCAGTGTTaGAGACCTGGAATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPARSGQC*RPGIRP
Trigger: GGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCT...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTCTCTCAGGTAGACAGTaGGGAGTCCTGGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCLSGRQ*GVLVQP
Trigger: CGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAG...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGTGTGGCGTTCAGTCCTaGGGTAGACCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWCGVQS*GRPEVP
Trigger: GGGGACCTCAGGTCTACCTCAGGACTGAACGCCACA...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCGGGCGGCGTGCCTGGTaGTGCGGCATCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASGRRAW*CGILPS
Trigger: TGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCC...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGGGAGCTTGTACCCTCTaGGCTCTGAGATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEEGACTL*ALRWGW
Trigger: CCAACCCCATCTCAGAGCTCAGAGGGTACAAGCTCC...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTGGAGCTTGTACCCTCTaGGCTCTGAGATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCGACTL*ALRWGW
Trigger: CCAACCCCATCTCAGAGCTCAGAGGGTACAAGCTCC...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACTCTTCGCTGCTGGGGTaGCTGGATGCCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNSSLLG*LDAWDL
Trigger: CAGGTCCCAGGCATCCAGGCACCCCAGCAGCGAAGA...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGTTATTTCTCCTTCTCTaGTTCTGCCCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMLFLLL*FCPTAL
Trigger: GAGGGCTGTGGGGCAGAAGCAGAGAAGGAGAAATAA...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGATCCTGCAGTCGCACATaGTTCTTGGCTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: LFPILASGLCLGRTSGEGSCSRT*FLAGVF
Trigger: AAAAACGCCAGCCAAGAAGCATGTGCGACTGCAGGA...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTTCCTGCAGTCGCACATaGTTCTTGGCTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCSCSRT*FLAGVF
Trigger: AAAAACGCCAGCCAAGAAGCATGTGCGACTGCAGGA...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGAGCCCCGCCTCTCCTaGAGTCGCACATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSEPRLS*SRTCFL
Trigger: CAAGAAGCATGTGCGACTGCAGGAGAGGCGGGGCTC...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGTACTGGATGAATTCTTCTTCCAGTTaGTTGGGGCTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QAEKRMCFTDRRSSWYWMNSSSS*LGLGGW
Trigger: CCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATT...CATCCAGTACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTCTTGCATCTGGCCTGTaGTTGGGCAGGACCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSLASGL*LGRTSG
Trigger: ACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAG...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGACTTTTCCCCATTCTTaGATCTGGCCTGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMTFPHS*IWPVLG
Trigger: CCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGT...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCTCCAGAGATTTCAACTaGCAGGCCTGGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LLLLLPVTASTTKEALLPSRDFN*QAWSPL
Trigger: CAGAGGTGACCAGGCCTGGCAGTTGAAATCTCTGGA...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS-3UTR GCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGGAGATGGATGAGGGGTaGTCATTCTCTCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMEMDEG*SFSQVD
Trigger: GTCTACCTGAGAGAATGAGCACCCCTCATCCATCTC...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTGTGGGGCTGTGCAGTTaGTTCCCTCTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCVGLCS*FPLGWL
Trigger: GAGCCAGCCCAGAGGGAAGCAACTGCACAGCCCCAC...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACGGGCCTGTGGGGCTGTaGAGTTGCTTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNGPVGL*SCFPLG
Trigger: GCCCAGAGGGAAGCAACTGCACAGCCCCACAGGCCC...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACGACAGGGCCCTCCGCTaGTGTTCTCTGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNDRALR*CSLACL
Trigger: CAGGCAGGCCAGAGAACAGCAGCGGAGGGCCCTGTC...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR GCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCAGATGGGTTCTCTCCTaGAGTCGCACATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LVSDGLARPKRGCALLTGRWVLS*SRTCFL
Trigger: CAAGAAGCATGTGCGACTGCAGGAGAGAACCCATCT...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496197.5
CDS-3UTR CCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCTTCCCAGAGCAGATGTaGCACAGACTCGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCFPEQM*HRLGVG
Trigger: CCCCACCCCGAGTCTGTGCCACATCTGCTCTGGGAA...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTAGCCTTGGGAATTCATaGCCAAGCACAGACCACATC +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCSLGNS*PSTDHI
Trigger: GATGTGGTCTGTGCTTGGCCATGAATTCCCAAGGCT...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGTTTTCAGGCGGAGGCTaGGTCATGGCTGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RHLTFIPISEWAASLRFKFSGGG*VMAAPK
Trigger: TTTGGGGGCAGCCATGACCCAGCCTCCGCCTGAAAA...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCCGGTCCTTGGAGGCGTaGCCAGGGATGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASRSLEA*PGMSRS
Trigger: AGACCTGGACATCCCTGGCCACGCCTCCAAGGACCG...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGGGGATTTGGCAAGATaGTCTTGTATCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LVSDGLARPKRGCALLTGGDLAR*SCIGPW
Trigger: CCAAGGACCGATACAAGACCATCTTGCCAAATCCCC...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp TCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGTACGGGGATTTGGCAAGATaGTCTTGTATCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGQAEKRMCFTDRRSSWYGDLAR*SCIGPW
Trigger: CCAAGGACCGATACAAGACCATCTTGCCAAATCCCC...GTACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGAACGGCTCTGGGGATTTaGCAAGATGGTCTTGTATCG +
Preference number: 4 (lower is better)
Translates to: LFPILASGLCLGRTSGEGTALGI*QDGLVS
Trigger: CGATACAAGACCATCTTGCCAAATCCCCAGAGCCGT...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTACGGCTCTGGGGATTTaGCAAGATGGTCTTGTATCG +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCTALGI*QDGLVS
Trigger: CGATACAAGACCATCTTGCCAAATCCCCAGAGCCGT...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAGACAGACACGGCTCTaGGGATTTGGCAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSRQTRL*GFGKMV
Trigger: GACCATCTTGCCAAATCCCCAGAGCCGTGTCTGTCT...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGTCCGACACAGTGTTaGGCATGGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNSPTQC*AWGPGW
Trigger: CCACCCAGGGCCCCATGCCCAACACTGTGTCGGACT...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCCGCTCTTCCTGGTACTaGATGGTGAGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGRSSWY*MVSCRT
Trigger: TGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCTGGTGTCTGATGGTCTaGCCAGGCCGAAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLLLLPVTASTTKEALLPWCLMV*PGRKED
Trigger: ATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCA...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTTGGTGTCTGATGGTCTaGCCAGGCCGAAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: AAVGTQYPECPLLLGLSAWCLMV*PGRKED
Trigger: ATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCA...AGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LVSDGLARPKRGCALLTGLSSRS*HTIPRM
Trigger: CATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCSSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGCCCCATTCTTGCATCTaGCCTGTGCTTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RHLTFIPISEWAASLRFKPHSCI*PVLGQD
Trigger: GTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGG...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCTACTCTTATGACACATaGGTGGAGGCAAGGGTAACC +
Preference number: 4 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCYSYDT*VEARVT
Trigger: GGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTA...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGGGGGAGGTGGAGGTGTaGGCAAGTCCATCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLGEVEV*ASPSPR
Trigger: CCTTGGGGATGGACTTGCCCACACCTCCACCTCCCC...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGACTTGGTTACTGTTCTaGAGCTTGTACCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPRTWLLF*SLYPLS
Trigger: GCTCAGAGGGTACAAGCTCCAGAACAGTAACCAAGT...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS-3UTR TCA 90 bp GGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTGACAGCCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: GTQYPECPLLLGLSAVDSPGLRG*QSLKGS
Trigger: AGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGG...GCTGTCAACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTGGATGTAGTTGGCATTaGTGTAATCTCCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCGCSWH*CNLRPP
Trigger: AGGAGGACGGAGATTACATCAATGCCAACTACATCC...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCTTGCCCTCTCGGAGCTaGGTGAGCATGACAATGAGG +
Preference number: 4 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGLPSRS*VSMTMR
Trigger: CCTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAA...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGCCTGGTACTGGATGGTaGGCTGCCGCACAGTGTATT +
Preference number: 4 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEEPGTGW*AAAQCI
Trigger: AATACACTGTGCGGCAGCTCACCATCCAGTACCAGG...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR TCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCAGCAGGGGCCCAGCTaGTTCTGGTGTCTGATGGTC +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHQQGPS*FWCLMV
Trigger: GACCATCAGACACCAGAATCAGCTGGGCCCCTGCTG...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAATTCGCGTGGCGATaGAGCAGCCCGTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: CLREHQDTWASFFVCHKCQFAWR*SSPSGQ
Trigger: TTGGCCGGACGGGCTGCTTCATCGCCACGCGAATTG...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR TCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCACGGGCTTTCAGCTGTTaGCAGCCAATTCGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPRAFSC*QPIRVA
Trigger: CGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCG...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGGAGTGGCCAGTGTTaGAGACCTGGAATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNRSGQC*RPGIRP
Trigger: GGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCT...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTACCTCGGGTGAAGGATaGTCTTGGAATCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCTSGEG*SWNHPF
Trigger: AAAAGGGTGATTCCAAGATCATCCTTCACCCGAGGT...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCACCCAGGGTATTATTTaGGCCATGGAAGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: EGCSFSQVDSEESWFSRATQGII*AMEAKQ
Trigger: CTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGT...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCTTGTGGCGTTCAGTCCTaGGGTAGACCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GPAYPGYYLSHGSKTETACGVQS*GRPEVP
Trigger: GGGGACCTCAGGTCTACCTCAGGACTGAACGCCACA...AGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCGAGAGAAGTCCTGAGTaGGGAGGCCCAGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCERSPE*GGPAVL
Trigger: GAGAACAGCTGGGCCTCCTCACTCAGGACTTCTCTC...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCACAGTGGGCCTTCCCCTaGACAGAGAATGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPQWAFP*TENGGL
Trigger: GAGGCCTCCATTCTCTGTTCAGGGGAAGGCCCACTG...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR GCA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACGACTCCTCTGCCCACTaGCCCTGCCTGACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNDSSAH*PCLTLA
Trigger: TGCCAAGGTCAGGCAGGGGCAGTGGGCAGAGGAGTC...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGTCCGCCCCTCCTTGCTaGCACCCACGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: HVIEQETEAHKECLREHQSAPPC*HPRTPQ
Trigger: CTGGGGTGTGCGTGGGTGGCAGCAAGGAGGGGCGGA...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCCCCAGGCTGCCTCTTaGCAGCTGTCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCPQAAS*QLSVCL
Trigger: CAGACAGACAGACAGCTGGCAAGAGGCAGCCTGGGG...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000462815.5
CDS-3UTR GCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCCCCAGGCTGCCTCTTaGCAGCTGTCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLPQAAS*QLSVCL
Trigger: CAGACAGACAGACAGCTGGCAAGAGGCAGCCTGGGG...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000462815.5
CDS-3UTR GCA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCTGTGGCCCCCAGGCTaGCTCTTGCCAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CLREHQDTWASFFVCHKCLWPPG*LLPAVC
Trigger: ACAGACAGCTGGCAAGAGGCAGCCTGGGGGCCACAG...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000462815.5
ENST00000495688.5
CDS-3UTR GCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTGAGCCCCGCCTCTCCTaGAGTCGCACATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCEPRLS*SRTCFL
Trigger: CAAGAAGCATGTGCGACTGCAGGAGAGGCGGGGCTC...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR GCA 90 bp AACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTGAGCCCCGCCTCTCCTaGAGTCGCACATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NTRTPGLLSLSVINASSCEPRLS*SRTCFL
Trigger: CAAGAAGCATGTGCGACTGCAGGAGAGGCGGGGCTC...ACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR GCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCTTTCATGTCCTGGATaGGGATCTGGAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LLLLLPVTASTTKEALLPLSCPG*GSGRVH
Trigger: ATGGACCCTTCCAGATCCGCATCCAGGACATGAAAG...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTGCAGGAACTGGTACTaGTCTGCCGTCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLCRNWY*SAVWII
Trigger: GATGATCCAGACGGCAGAGCAGTACCAGTTCCTGCA...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACCTGGGACCTGAAGGGTaGCCCCCAAGTCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNLGPEG*PPSPRL
Trigger: GAGTCTTGGACTTGGGGGCCACCCTTCAGGTCCCAG...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCTGTCCTCTTCGCTGCTaGGGTGCCTGGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLREHQDTWASFFVCHKCCPLRC*GAWMPG
Trigger: CCCAGGCATCCAGGCACCCCAGCAGCGAAGAGGACA...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCAACACAGTGTTGGGCATaGGGCCCTGGGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPATQCWA*GPGWQC
Trigger: ACATTGCCACCCAGGGCCCCATGCCCAACACTGTGT...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGAGGGAGGTAGGCACCTaGGCCACCGGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HVIEQETEAHKECLREHQREVGT*ATGGWQ
Trigger: CTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCT...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGAGCCCTTCCGATGTGTaGTCAGGGAGCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEESPSDV*SGSRVT
Trigger: AGTGACTCTGCTCCCTGACCACACATCGGAAGGGCT...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATAGTGGCCAGCAACCATaGAGGCAGGAGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHSGQQP*RQEQLL
Trigger: GAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACT...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCCTGTCGGTCTGTCTTTaGGGGCTGAGAAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VSENTRTPGLLSLSVINALSVCL*GLRRLQ
Trigger: CTGGAGCCTTCTCAGCCCTCAAAGACAGACCGACAG...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR TCA 90 bp CTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGAGGCTCACTCAGCCATaGGGTCTGCTGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LREHQDTWASFFVCHKCQRLTQP*GLLKQL
Trigger: CAGCTGCTTCAGCAGACCTCATGGCTGAGTGAGCCT...CTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000462815.5
ENST00000495688.5
CDS-3UTR TCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTGCAGAAAGTGTAGGGTaGCCTCCCGGGGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCAESVG*PPGVCS
Trigger: TGAACACACCCCGGGAGGTCACCCTACACTTTCTGC...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR TCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAAGGAGTGGCCAGTGTTaGAGACCTGGAATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPRSGQC*RPGIRP
Trigger: GGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCT...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGTGTAGCCTACTCTTATaGCACATGGGTGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: RMILESPFCQPQEGVAGVCSLLL*HMGGGK
Trigger: CTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACA...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCCTCTCAGGTAGACAGTaGGGAGTCCTGGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASLSGRQ*GVLVQP
Trigger: CGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAG...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCGAGAGAAGTCCTGAGTaGGGAGGCCCAGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLERSPE*GGPAVL
Trigger: GAGAACAGCTGGGCCTCCTCACTCAGGACTTCTCTC...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCTTCAGGAGAGAAGTCCTaGGTGAGGAGGCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GPAYPGYYLSHGSKTETASGEKS*VRRPSC
Trigger: ACAGCTGGGCCTCCTCACTCAGGACTTCTCTCCTGA...AGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGGAGTACACAGGGCTCTaGGCAGGTCCAAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLEYTGL*AGPSGR
Trigger: TCTCCCACTTGGACCTGCTCAGAGCCCTGTGTACTC...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR GCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCAAGGCTGGGTCATGGCTaGCCCCAAAGACAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPARLGHG*PQRQGQ
Trigger: TTGACCTTGTCTTTGGGGGCAGCCATGACCCAGCCT...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTAATTCTTCTTCCAGTTaGTTGGGGCTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVGTQYPECPLLLGLSAVNSSSS*LGLGGW
Trigger: CCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATT...AACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR GCA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTCTTTCATGTCCTGGATaGGGATCTGGAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLLSCPG*GSGRVH
Trigger: ATGGACCCTTCCAGATCCGCATCCAGGACATGAAAG...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGTACTGGATGGTGAGCTaGCGCACAGTGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: RHLTFIPISEWAASLRFKYWMVS*RTVYSG
Trigger: CCCAGAATACACTGTGCGGCAGCTCACCATCCAGTA...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GTAGTGGACACATTTCTCCTTGCCCTCTCGGAGCTGAGTGAGCATGACAATGAGTACTGGATGGTGAGCTaGCGCACAGTGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: VVDTFLLALSELSEHDNEYWMVS*RTVYSG
Trigger: CCCAGAATACACTGTGCGGCAGCTCACCATCCAGTA...CTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAAGGAGAAATGTGTCCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR GCA 90 bp TTGGAAACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCTTGCATCTGGCCTGTaGTTGGGCAGGACCTCGGGT +
Preference number: 4 (lower is better)
Translates to: LETAKLSRCTQQMQGIVGLASGL*LGRTSG
Trigger: ACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAG...ACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGTTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCCCGAGCCTCCATGTCTaGATGGATGGTTATGACCCT +
Preference number: 4 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGPSLHV*MDGYDP
Trigger: AGGGTCATAACCATCCATGCAGACATGGAGGCTCGG...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp AGATCAGGACCAGACTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGAGAGATGGATGAGGGGTaGTCATTCTCTCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: RSGPDFSPFLHLACAWAGEMDEG*SFSQVD
Trigger: GTCTACCTGAGAGAATGAGCACCCCTCATCCATCTC...TCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTCTGGTCCTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGTCCTCTCCTAACTGCTaGTGTTCCACTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RHLTFIPISEWAASLRFKSSPNC*CSTPRS
Trigger: AGACCTGGGAGTGGAACAGCAGCAGTTAGGAGAGGA...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR GCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACCTCAGCCATGAGGTCTaGCTGAAAGACAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNLSHEV*LKDRAL
Trigger: GAGGGCCCTGTCTTTCAGGCAGACCTCATGGCTGAG...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTGCGGAGGCTGGGTCATaGCTGCCCCCAAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSAEAGS*LPPKTR
Trigger: CCTTGTCTTTGGGGGCAGCCATGACCCAGCCTCCGC...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATTTTTCAGGCGGAGGCTaGGTCATGGCTGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHFSGGG*VMAAPK
Trigger: TTTGGGGGCAGCCATGACCCAGCCTCCGCCTGAAAA...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACTGTTCACAGAGCAGATaGGTTCTACGGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNCSQSR*VLRPPG
Trigger: CCCTGGGGGCCGTAGAACCCATCTGCTCTGTGAACA...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCTGTTCACAGAGCAGATaGGTTCTACGGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSENTRTPGLLSLSVINACSQSR*VLRPPG
Trigger: CCCTGGGGGCCGTAGAACCCATCTGCTCTGTGAACA...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp TCTTTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCAGGGGATTTGGCAAGATaGTCTTGTATCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SFDWGHPALPMCGQGAESGDLAR*SCIGPW
Trigger: CCAAGGACCGATACAAGACCATCTTGCCAAATCCCC...TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCCGCTCTTCCTGGTACTaGATGGTGAGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: VSENTRTPGLLSLSVINARSSWY*MVSCRT
Trigger: TGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAGACCGGCGCTCTTCCTaGTACTGGATGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPDRRSS*YWMVSC
Trigger: GCAGCTCACCATCCAGTACCAGGAAGAGCGCCGGTC...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGTGGTGTCTGATGGTCTaGCCAGGCCGAAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: RHLTFIPISEWAASLRFKWCLMV*PGRKED
Trigger: ATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCA...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATACGATAGGCCCGGGGTaGGCGGCTGTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHTIGPG*AAVSGL
Trigger: GAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGT...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: RMILESPFCQPQEGVAGVLSSRS*HTIPRM
Trigger: CATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLLLPVTASTTKEALLPSSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000496197.5
CDS-3UTR CCA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAAGGAGTGGCTGGAGTaGCTTCTAGAAACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSKEWLE*LLETSL
Trigger: GAGAGAAGTTTCTAGAAGCCACTCCAGCCACTCCTT...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCACATCTGGCCTGTGCTTaGGCAGGACCTCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPHLACA*AGPRVK
Trigger: CTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATG...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGAGTAGTTGGTGGGAGTaGCCAGCAACCATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWSSWWE*PATMEA
Trigger: TGCCTCCATGGTTGCTGGCCACTCCCACCAACTACT...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTCCCCTGAACAGAGAATaGAGGCCTCCAGCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSPLNRE*RPPAVL
Trigger: CAACACTGCTGGAGGCCTCCATTCTCTGTTCAGGGG...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCTGGCCTGCCTGATTaGCCAGAAGGAGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASSGLPD*PEGGSH
Trigger: ATGGGAGCCTCCTTCTGGCCAATCAGGCAGGCCAGA...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR TCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGATGGATGCCTGGGACCTaGAGGGTGGCCCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERWMPGT*RVAPKS
Trigger: GGACTTGGGGGCCACCCTTCAGGTCCCAGGCATCCA...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR TCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCGAGGATGTGCTTTACTaGCCGGCGCTCTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLEDVLY*PALFLV
Trigger: TACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTC...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR TCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTGGGCAGGACCTCGGGTaGAGGATGATCTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCGQDLG*RMILES
Trigger: TGATTCCAAGATCATCCTTCACCCGAGGTCCTGCCC...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTGTAGCCTACTCTTATaGCACATGGGTGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEECSLLL*HMGGGK
Trigger: CTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACA...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGACCCAGGGTATTATTTaGGCCATGGAAGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: FDWGHPALPMCGQGAESLTQGII*AMEAKQ
Trigger: CTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGT...CAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCAGGCTGGGTCATGGCTaGCCCCAAAGACAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASRLGHG*PQRQGQ
Trigger: TTGACCTTGTCTTTGGGGGCAGCCATGACCCAGCCT...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR GCA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTAGGGACACTTCCTCTTaGCACACCATCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSRDTSS*HTISQK
Trigger: CTTCTGGGAGATGGTGTGGCAAGAGGAAGTGTCCCT...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTCTTTCATGTCCTGGATaGGGATCTGGAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: AVGTQYPECPLLLGLSAVLSCPG*GSGRVH
Trigger: ATGGACCCTTCCAGATCCGCATCCAGGACATGAAAG...AACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACCAGTTGCTTGGGGCTaGGTGGCTGGCGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERPVAWG*VAGAEG
Trigger: CCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGG...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTACGGCTCTGGGGATTTaGCAAGATGGTCTTGTATCG +
Preference number: 4 (lower is better)
Translates to: AVGTQYPECPLLLGLSAVTALGI*QDGLVS
Trigger: CGATACAAGACCATCTTGCCAAATCCCCAGAGCCGT...AACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp TTCTGGGCACTCTTTCATGTCCTGGATGCGGATCTGGAAGGGTCCATAGGTTTCCACTCTTTCATGTCCTaGATGCGGATCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: FWALFHVLDADLEGSIGFHSFMS*MRIWKG
Trigger: ACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTG...GAAACCTATGGACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTGCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp ATTCTGGGCACTCTTTCATGTCCTGGATGCGGATCTGGAAGGGTCCATAGGTTTTGGTGTCTGATGGTCTaGCCAGGCCGAAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: ILGTLSCPGCGSGRVHRFWCLMV*PGRKED
Trigger: ATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCA...AAACCTATGGACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTGCCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGTGGTGTCTGATGGTCTaGCCAGGCCGAAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWWCLMV*PGRKED
Trigger: ATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCA...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCCCAGTGTTGAAGACCTaGAATCCGGCCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASPVLKT*NPAPCP
Trigger: AGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGG...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCCCTTACTGTCCATCTaGGGCCAACAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLPLLSI*GQQRKQ
Trigger: CTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGG...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCAGCCCCAGGAAGGAGTaGCTGGAGTGGCTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLSPRKE*LEWLLE
Trigger: TTCTAGAAGCCACTCCAGCCACTCCTTCCTGGGGCT...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGGACCCTGATTGTTTTTaGAAACAGCCAAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMDPDCF*KQPSSL
Trigger: TAGAGAGCTTGGCTGTTTCCAAAAACAATCAGGGTC...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp ATTCTGGGCACTCTTTCATGTCCTGGATGCGGATCTGGAAGGGTCCATAGGTTTTGTTCACAGAGCAGATaGGTTCTCTCCTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: ILGTLSCPGCGSGRVHRFCSQSR*VLSCSR
Trigger: GCGACTGCAGGAGAGAACCCATCTGCTCTGTGAACA...AAACCTATGGACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTGCCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496197.5
CDS-3UTR TCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASPGLRG*QSLKGS
Trigger: AGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGG...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLPGLRG*QSLKGS
Trigger: AGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGG...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGGGATGTAGTTGGCATTaGTGTAATCTCCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEEGCSWH*CNLRPP
Trigger: AGGAGGACGGAGATTACATCAATGCCAACTACATCC...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGCGGGCTTTCAGCTGTTaGCAGCCAATTCGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: HVIEQETEAHKECLREHQRAFSC*QPIRVA
Trigger: CGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCG...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR TCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGGAGTGGCCAGTGTTaGAGACCTGGAATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: WASFFVCHKCQLLSLSSERSGQC*RPGIRP
Trigger: GGGCCGGATTCCAGGTCTTCAACACTGGCCACTCCT...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCATGTAGCCTACTCTTATaGCACATGGGTGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPACSLLL*HMGGGK
Trigger: CTTGCCTCCACCCATGTGTCATAAGAGTAGGCTACA...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAGCTCCTCTTTGCCTCTaGGTAGTCCCCACATGTTCC +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPAPLCL*VVPTCS
Trigger: GGAACATGTGGGGACTACTCAGAGGCAAAGAGGAGC...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCACCTCAAAGCCCTTGCTaGTTCAAGCCTTGGGAATTC +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPAPQSPC*FKPWEF
Trigger: GAATTCCCAAGGCTTGAAGCAGCAAGGGCTTTGAGG...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR GCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAAGGCTGGGTCATGGCTaGCCCCAAAGACAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPRLGHG*PQRQGQ
Trigger: TTGACCTTGTCTTTGGGGGCAGCCATGACCCAGCCT...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAATTCTTCTTCCAGTTaGTTGGGGCTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSENTRTPGLLSLSVINANSSSS*LGLGGW
Trigger: CCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATT...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR GCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCAAGGGACACTTCCTCTTaGCACACCATCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPRDTSS*HTISQK
Trigger: CTTCTGGGAGATGGTGTGGCAAGAGGAAGTGTCCCT...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCCTTTCATGTCCTGGATaGGGATCTGGAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCLSCPG*GSGRVH
Trigger: ATGGACCCTTCCAGATCCGCATCCAGGACATGAAAG...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGGCCGAAAAGAGGATGTaGTTTACTGACCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLAEKRM*FTDRRS
Trigger: AGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGC...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGTGCAGGAACTGGTACTaGTCTGCCGTCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLCRNWY*SAVWII
Trigger: GATGATCCAGACGGCAGAGCAGTACCAGTTCCTGCA...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR GCA 90 bp GGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCTTGCAGGAACTGGTACTaGTCTGCCGTCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: GPAYPGYYLSHGSKTETACRNWY*SAVWII
Trigger: GATGATCCAGACGGCAGAGCAGTACCAGTTCCTGCA...AGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGTGCAGGAACTGGTACTaGTCTGCCGTCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: LREHQDTWASFFVCHKCQCRNWY*SAVWII
Trigger: GATGATCCAGACGGCAGAGCAGTACCAGTTCCTGCA...CTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR GCA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: PVTASTTKEALLPHTNPRFVCHK*QLLSLS
Trigger: ACTTAAAGACAGGAGCTGGCATTTATGACAGACAAA...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000496197.5
CDS-3UTR GCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCACTTTTCCCCATTCTTaGATCTGGCCTGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCTFPHS*IWPVLG
Trigger: CCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGT...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGTCCAGAGATTTCAACTaGCAGGCCTGGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LREHQDTWASFFVCHKCQSRDFN*QAWSPL
Trigger: CAGAGGTGACCAGGCCTGGCAGTTGAAATCTCTGGA...CTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTTCCAGAGATTTCAACTaGCAGGCCTGGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCSRDFN*QAWSPL
Trigger: CAGAGGTGACCAGGCCTGGCAGTTGAAATCTCTGGA...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGCCGAGCCTCCATGTCTaGATGGATGGTTATGACCCT +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLPSLHV*MDGYDP
Trigger: AGGGTCATAACCATCCATGCAGACATGGAGGCTCGG...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATGGGCCTGTGGGGCTGTaGAGTTGCTTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHGPVGL*SCFPLG
Trigger: GCCCAGAGGGAAGCAACTGCACAGCCCCACAGGCCC...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGCAGAGTCCACTTGTaGGAGGGAGTCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WASFFVCHKCQLLSLSSESRVHL*EGVRGA
Trigger: AGCCCCTCGGACTCCCTCCCACAAGTGGACTCTGCT...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGCACTCTTTCATGTCCTaGATGCGGATCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWHSFMS*MRIWKG
Trigger: ACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTG...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCACACTCTTTCATGTCCTaGATGCGGATCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPAHSFMS*MRIWKG
Trigger: ACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTG...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGTGTATTCTGGGCACTCTTTCATGTCCTGGATGCGGATCTGGAAGGGTCCATACACTCTTTCATGTCCTaGATGCGGATCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SVFWALFHVLDADLEGSIHSFMS*MRIWKG
Trigger: ACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTG...TATGGACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTGCCCAGAATACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTCGCTCTTCCTGGTACTaGATGGTGAGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSRSSWY*MVSCRT
Trigger: TGTGCGGCAGCTCACCATCCAGTACCAGGAAGAGCG...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGTTCTTTCTTTTGATTaGGGTCATCCAGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: RHLTFIPISEWAASLRFKVLSFD*GHPALP
Trigger: CGGAAGGGCTGGATGACCCCAATCAAAAGAAAGAAC...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCTAAGAGTAGTTGGTaGGAGTGGCCAGCAACCATG +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHPKSSW*EWPATM
Trigger: CATGGTTGCTGGCCACTCCCACCAACTACTCTTAGG...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCGTGTTGATGCTGAGATaGATGAGGGGTGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGVLMLR*MRGAHS
Trigger: AGAATGAGCACCCCTCATCCATCTCAGCATCAACAC...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCACAGGATCTATTTGGTaGGACCCAGGGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSENTRTPGLLSLSVINATGSIW*DPGQKA
Trigger: TGCCTTCTGCCCTGGGTCCCACCAAATAGATCCTGT...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367279.8
3UTR CAA 72 bp GATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGTaGAGACTTGGAGATCAGGACCAGACTTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DVWSGSRVTDRM*RLGDQDQTFPH
Trigger: ATGGGGAAAAGTCTGGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGACTCTGCTCCCTGACCACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGCTCTCCTGCTCAACCTaGCCTTGGCCGGAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: WASFFVCHKCQLLSLSSELSCST*PWPEAY
Trigger: ATAAGCCTCCGGCCAAGGTCAGGTTGAGCAGGAGAG...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR TCA 90 bp GAAGCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGACCTGGTACTGGATGGTaGGCTGCCGCACAGTGTATT +
Preference number: 4 (lower is better)
Translates to: EALGKSSSVLALRVLQERPGTGW*AAAQCI
Trigger: AATACACTGTGCGGCAGCTCACCATCCAGTACCAGG...TCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTGAGGATGTGCTTTACTaGCCGGCGCTCTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSEDVLY*PALFLV
Trigger: TACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTC...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATCAATTCGCGTGGCGATaGAGCAGCCCGTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHQFAWR*SSPSGQ
Trigger: TTGGCCGGACGGGCTGCTTCATCGCCACGCGAATTG...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR GCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAAATTCTTCTTCCAGTTaGTTGGGGCTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPNSSSS*LGLGGW
Trigger: CCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATT...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCAGGGACACTTCCTCTTaGCACACCATCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CLREHQDTWASFFVCHKCRDTSS*HTISQK
Trigger: CTTCTGGGAGATGGTGTGGCAAGAGGAAGTGTCCCT...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCTCTTTCATGTCCTGGATaGGGATCTGGAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GPAYPGYYLSHGSKTETALSCPG*GSGRVH
Trigger: ATGGACCCTTCCAGATCCGCATCCAGGACATGAAAG...AGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCACTTTTCCCCATTCTTaGATCTGGCCTGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLTFPHS*IWPVLG
Trigger: CCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGT...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCCGAGCCTCCATGTCTaGATGGATGGTTATGACCCT +
Preference number: 4 (lower is better)
Translates to: CLREHQDTWASFFVCHKCPSLHV*MDGYDP
Trigger: AGGGTCATAACCATCCATGCAGACATGGAGGCTCGG...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGGGGTCCTCTCCTAACTaGTGCTGTTCCACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: WASFFVCHKCQLLSLSSEGSSPN*CCSTPR
Trigger: CCTGGGAGTGGAACAGCAGCAGTTAGGAGAGGACCC...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAAGACTTACAGACAGTaGACAGTCTCTGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VSENTRTPGLLSLSVINAKTYRQ*TVSGPH
Trigger: GTGAGGGCCAGAGACTGTCCACTGTCTGTAAGTCTT...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATTGCTGCTTCAAGCCTTaGGAATTCATGGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHCCFKP*EFMAKH
Trigger: GTGCTTGGCCATGAATTCCCAAGGCTTGAAGCAGCA...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp CTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGACGGCTCTGGGGATTTaGCAAGATGGTCTTGTATCG +
Preference number: 4 (lower is better)
Translates to: LREHQDTWASFFVCHKCQTALGI*QDGLVS
Trigger: CGATACAAGACCATCTTGCCAAATCCCCAGAGCCGT...CTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCAAGACAGACACGGCTCTaGGGATTTGGCAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPRQTRL*GFGKMV
Trigger: GACCATCTTGCCAAATCCCCAGAGCCGTGTCTGTCT...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGACACAGTGTTGGGCATaGGGCCCTGGGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: HVIEQETEAHKECLREHQTQCWA*GPGWQC
Trigger: ACATTGCCACCCAGGGCCCCATGCCCAACACTGTGT...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATAGTCCGACACAGTGTTaGGCATGGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHSPTQC*AWGPGW
Trigger: CCACCCAGGGCCCCATGCCCAACACTGTGTCGGACT...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCACTCTTTCATGTCCTaGATGCGGATCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCHSFMS*MRIWKG
Trigger: ACCCTTCCAGATCCGCATCCAGGACATGAAAGAGTG...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGAGTTCAGAGAGACATTaGAGGTTCCCCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWSSERH*RFPLLS
Trigger: GGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACT...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGATTACTTTTCCCTCATaGCAGCTAAGCACTTATGTT +
Preference number: 4 (lower is better)
Translates to: VPGDAASYLHPHLRMGSQITFPS*QLSTYV
Trigger: AACATAAGTGCTTAGCTGCCATGAGGGAAAAGTAAT...CTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTAGCCCCAGGAAGGAGTaGCTGGAGTGGCTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSSPRKE*LEWLLE
Trigger: TTCTAGAAGCCACTCCAGCCACTCCTTCCTGGGGCT...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGAAGTGGCCAGCAACCATaGAGGCAGGAGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERSGQQP*RQEQLL
Trigger: GAGGAGCTGCTCCTGCCTCCATGGTTGCTGGCCACT...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCAGCCTCCATGTCTGCATaGATGGTTATGACCCTGATT +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPAASMSA*MVMTLI
Trigger: AATCAGGGTCATAACCATCCATGCAGACATGGAGGC...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGGACAGTGAGGAGTCCTaGTTCAGCCGAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: HVIEQETEAHKECLREHQDSEES*FSRASM
Trigger: CATGGAGGCTCGGCTGAACCAGGACTCCTCACTGTC...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGTGTTGATGCTGAGATaGATGAGGGGTGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSVLMLR*MRGAHS
Trigger: AGAATGAGCACCCCTCATCCATCTCAGCATCAACAC...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGATCCCCATCTCAGAATaGGCAGCCAGTCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLIPISE*AASLRF
Trigger: GAATCTGAGACTGGCTGCCCATTCTGAGATGGGGAT...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCACTTGGTTACTGTTCTaGAGCTTGTACCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCTWLLF*SLYPLS
Trigger: GCTCAGAGGGTACAAGCTCCAGAACAGTAACCAAGT...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGGGATGTAGTTGGCATTaGTGTAATCTCCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLGCSWH*CNLRPP
Trigger: AGGAGGACGGAGATTACATCAATGCCAACTACATCC...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCACCTCGGGTGAAGGATaGTCTTGGAATCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: SENTRTPGLLSLSVINASTSGEG*SWNHPF
Trigger: AAAAGGGTGATTCCAAGATCATCCTTCACCCGAGGT...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATTCACTGATAGGATGTTaGGACTTGGAGATCAGGACC +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHSLIGC*DLEIRT
Trigger: GGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGA...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTTCACTGATAGGATGTTaGGACTTGGAGATCAGGACC +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCSLIGC*DLEIRT
Trigger: GGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGA...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCCTTGTTCTTTCTTTTaGTTGGGGTCATCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLPCSFF*LGSSSP
Trigger: AGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGG...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCACCTTGTTCTTTCTTTTaGTTGGGGTCATCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPPCSFF*LGSSSP
Trigger: AGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGG...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp AACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCCTTGTTCTTTCTTTTaGTTGGGGTCATCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: NTRTPGLLSLSVINASSCPCSFF*LGSSSP
Trigger: AGGGCTGGATGACCCCAATCAAAAGAAAGAACAAGG...ACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGATCAGGAGAGAAGTCCTaGGTGAGGAGGCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERSGEKS*VRRPSC
Trigger: ACAGCTGGGCCTCCTCACTCAGGACTTCTCTCCTGA...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTGCCGAAAAGAGGATGTaGTTTACTGACCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSAEKRM*FTDRRS
Trigger: AGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGC...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GAAGCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAGCCGAAAAGAGGATGTaGTTTACTGACCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: EALGKSSSVLALRVLQERAEKRM*FTDRRS
Trigger: AGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGC...TCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAAGGAGTGGCTGGAGTaGCTTCTAGAAACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSENTRTPGLLSLSVINAKEWLE*LLETSL
Trigger: GAGAGAAGTTTCTAGAAGCCACTCCAGCCACTCCTT...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCATACTCTTATGACACATaGGTGGAGGCAAGGGTAACC +
Preference number: 4 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPYSYDT*VEARVT
Trigger: GGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTA...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GAAGCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGACCTAAGAGTAGTTGGTaGGAGTGGCCAGCAACCATG +
Preference number: 4 (lower is better)
Translates to: EALGKSSSVLALRVLQERPKSSW*EWPATM
Trigger: CATGGTTGCTGGCCACTCCCACCAACTACTCTTAGG...TCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACGCCTCCATGTCTGCATaGATGGTTATGACCCTGATT +
Preference number: 4 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNASMSA*MVMTLI
Trigger: AATCAGGGTCATAACCATCCATGCAGACATGGAGGC...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TGGGTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATACTTGGTTACTGTTCTaGAGCTTGTACCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: WVEARVTRVLVLSFDWGHTWLLF*SLYPLS
Trigger: GCTCAGAGGGTACAAGCTCCAGAACAGTAACCAAGT...ATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTGCACTCTGTTTTCACTaGGGCGTCTTCTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSALCFH*GVFCSP
Trigger: TGGGGAACAGAAGACGCCCCAGTGAAAACAGAGTGC...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR TCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATAGGCTCACTCAGCCATaGGGTCTGCTGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHRLTQP*GLLKQL
Trigger: CAGCTGCTTCAGCAGACCTCATGGCTGAGTGAGCCT...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: WASFFVCHKCQLLSLSSEPGLRG*QSLKGS
Trigger: AGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGG...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGAGCTCCTCTTTGCCTCTaGGTAGTCCCCACATGTTCC +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERAPLCL*VVPTCS
Trigger: GGAACATGTGGGGACTACTCAGAGGCAAAGAGGAGC...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTTCCTGCAGTCGCACATaGTTCTTGGCTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSSCSRT*FLAGVF
Trigger: AAAAACGCCAGCCAAGAAGCATGTGCGACTGCAGGA...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: RMILESPFCQPQEGVAGVFVCHK*QLLSLS
Trigger: ACTTAAAGACAGGAGCTGGCATTTATGACAGACAAA...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAGCCATCTGTGTTTCTCCTCTaGGTCTTTGTCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: SLHVCMDGYDPDCFWKQPSVFLL*VFVTSS
Trigger: GCTGGATGTGACAAAGACCCAGAGGAGAAACACAGA...TGGCTGTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSLSSRS*HTIPRM
Trigger: CATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATTCTGTCTTTGAGGGCTaGGAAGGCTCCAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHSVFEG*EGSRKP
Trigger: TGGCTTCCTGGAGCCTTCTCAGCCCTCAAAGACAGA...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR TCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATGAGGATGTGCTTTACTaGCCGGCGCTCTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHEDVLY*PALFLV
Trigger: TACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTC...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCATATAGAACAGGAAACTaGAGCTCACAAAGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPAYRTGN*SSQRVS
Trigger: AGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATA...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GAAGCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGATCACTGATAGGATGTTaGGACTTGGAGATCAGGACC +
Preference number: 4 (lower is better)
Translates to: EALGKSSSVLALRVLQERSLIGC*DLEIRT
Trigger: GGTCCTGATCTCCAAGTCTCAACATCCTATCAGTGA...TCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATAAGGAGGAGGAATCCTaGGGTGTGGCGTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHKEEES*GVAFSP
Trigger: AGGACTGAACGCCACACCTCAGGATTCCTCCTCCTT...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGAAGGGCCAAAGTGTGGTaGAGGAACTGGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERRAKVW*RNWYCS
Trigger: AGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCT...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGGGGGATTTGGCAAGATaGTCTTGTATCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HVIEQETEAHKECLREHQGDLAR*SCIGPW
Trigger: CCAAGGACCGATACAAGACCATCTTGCCAAATCCCC...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGAAGACAGACACGGCTCTaGGGATTTGGCAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERRQTRL*GFGKMV
Trigger: GACCATCTTGCCAAATCCCCAGAGCCGTGTCTGTCT...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATG +
Preference number: 4 (lower is better)
Translates to: HVIEQETEAHKECLREHQLSSRS*HTIPRM
Trigger: CATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp GTTGATGCTGAGATGGATGAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGATTACTTTTCCCTCATaGCAGCTAAGCACTTATGTT +
Preference number: 4 (lower is better)
Translates to: VDAEMDEGCSFSQVDSEEITFPS*QLSTYV
Trigger: AACATAAGTGCTTAGCTGCCATGAGGGAAAAGTAAT...CTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTCATCCATCTCAGCATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GAAGCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAAGGAGTGGCTGGAGTaGCTTCTAGAAACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: EALGKSSSVLALRVLQERKEWLE*LLETSL
Trigger: GAGAGAAGTTTCTAGAAGCCACTCCAGCCACTCCTT...TCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATCTCCCTAAGAGTAGTTaGTGGGAGTGGCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHLPKSS*WEWPAT
Trigger: GGTTGCTGGCCACTCCCACCAACTACTCTTAGGGAG...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGGACCCTGATTGTTTTTaGAAACAGCCAAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: APVFKFRETLEVPLTVHLDPDCF*KQPSSL
Trigger: TAGAGAGCTTGGCTGTTTCCAAAAACAATCAGGGTC...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGGGATGTAGTTGGCATTaGTGTAATCTCCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WASFFVCHKCQLLSLSSEGCSWH*CNLRPP
Trigger: AGGAGGACGGAGATTACATCAATGCCAACTACATCC...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR TCA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCTATAGAACAGGAAACTaGAGCTCACAAAGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: REHQDTWASFFVCHKCQLYRTGN*SSQRVS
Trigger: AGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATA...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR TCA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTTATAGAACAGGAAACTaGAGCTCACAAAGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: HKECLREHQDTWASFFVCYRTGN*SSQRVS
Trigger: AGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATA...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR TCA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTACCCAGGGTATTATTTaGGCCATGGAAGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: ALGKSSSVLALRVLQERSTQGII*AMEAKQ
Trigger: CTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGT...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGATCCTGCAGTCGCACATaGTTCTTGGCTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERSCSRT*FLAGVF
Trigger: AAAAACGCCAGCCAAGAAGCATGTGCGACTGCAGGA...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR GCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATAGGGCCAAAGTGTGGTaGAGGAACTGGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHRAKVW*RNWYCS
Trigger: AGAGCAGTACCAGTTCCTGCACCACACTTTGGCCCT...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGAGGGGATTTGGCAAGATaGTCTTGTATCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERGDLAR*SCIGPW
Trigger: CCAAGGACCGATACAAGACCATCTTGCCAAATCCCC...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CCA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTATTACTTTTCCCTCATaGCAGCTAAGCACTTATGTT +
Preference number: 4 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSITFPS*QLSTYV
Trigger: AACATAAGTGCTTAGCTGCCATGAGGGAAAAGTAAT...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACGACCCTGATTGTTTTTaGAAACAGCCAAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNDPDCF*KQPSSL
Trigger: TAGAGAGCTTGGCTGTTTCCAAAAACAATCAGGGTC...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp AACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: NTRTPGLLSLSVINASSCFVCHK*QLLSLS
Trigger: ACTTAAAGACAGGAGCTGGCATTTATGACAGACAAA...ACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGATACTCTTATGACACATaGGTGGAGGCAAGGGTAACC +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERYSYDT*VEARVT
Trigger: GGTTACCCTTGCCTCCACCCATGTGTCATAAGAGTA...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR GCA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACTTTGTCTGTCATAAATaGCAGCTCCTGTCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNFVCHK*QLLSLS
Trigger: ACTTAAAGACAGGAGCTGGCATTTATGACAGACAAA...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATGTTCTTTCTTTTGATTaGGGTCATCCAGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHVLSFD*GHPALP
Trigger: CGGAAGGGCTGGATGACCCCAATCAAAAGAAAGAAC...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CCA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATGTGTTGATGCTGAGATaGATGAGGGGTGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHVLMLR*MRGAHS
Trigger: AGAATGAGCACCCCTCATCCATCTCAGCATCAACAC...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR TCA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGATATAGAACAGGAAACTaGAGCTCACAAAGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERYRTGN*SSQRVS
Trigger: AGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATA...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CAA 90 bp CCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCGCAGCCCCACCTTCCCAGGCTaGAGGGAGGTAGGCACCTGG +
Preference number: 5 (lower is better)
Translates to: PGWAAVSGLSSTSATRRSPTFPG*REVGTW
Trigger: CCAGGTGCCTACCTCCCTCAAGCCTGGGAAGGTGGG...GCTGCGCCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp CCCAGGCTTGAGGGAGGTAGGCACCTGGGCCACCGGAGGGTGGCAGGGGTCAGGCCCACCTTCCCAGGCTaGAGGGAGGTAGGCACCTGG +
Preference number: 5 (lower is better)
Translates to: PRLEGGRHLGHRRVAGVRPTFPG*REVGTW
Trigger: CCAGGTGCCTACCTCCCTCAAGCCTGGGAAGGTGGG...CCTGACCCCTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCTCAAGCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACGTCTTGTATCGGTCCTaGGAGGCGTGGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: AVDYDRPGVGGCLRALLHVLYRS*EAWPGM
Trigger: CATCCCTGGCCACGCCTCCAAGGACCGATACAAGAC...GTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp TGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTAAGTCCGACACAGTGTaGGGCATGGGGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: WTTIGPGWAAVSGLSSTSKSDTV*GMGPWV
Trigger: CACCCAGGGCCCCATGCCCAACACTGTGTCGGACTT...AGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp CCCAGGCTTGAGGGAGGTAGGCACCTGGGCCACCGGAGGGTGGCAGGGGTCAGGCTGGAATCCGGCCCCTaGTCCTTACTGCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PRLEGGRHLGHRRVAGVRLESGP*SLLLLL
Trigger: AAGCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAG...CCTGACCCCTGCCACCCTCCGGTGGCCCAGGTGCCTACCTCCCTCAAGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496197.5
CDS CCA 90 bp GTTCTACGGCCCCCAGGGACCGAACGTCCAGCATCAGAGCCACATTaGAGCCCCGCCTGCAGGCATAGCCCACCACTCTCCTGCAGTCGC +
Preference number: 5 (lower is better)
Translates to: VLRPPGTERPASEPH*SPACRHSPPLSCSR
Trigger: GCGACTGCAGGAGAGTGGTGGGCTATGCCTGCAGGCGGGGCTCCAATGTGGCTCTGATGCTGGACGTTCGGTCCCTGGGGGCCGTAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435759.6
CDS-3UTR CAA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGACCTTGGCAGGCTCCTaGCGGGCCAGCAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: GAACLVMRHLTFIPISEWTLAGS*RASSPA
Trigger: GGCTGGGCTGCTGGCCCGCAAGGAGCCTGCCAAGGT...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp CCCTGCACTGCAGTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTGGAATCCGGCCCCTaGTCCTTACTGCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PCTAVDYDRPGVGGCLRALESGP*SLLLLL
Trigger: AAGCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAG...AGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCACTGCAGTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS CCA 90 bp GTTCTACGGCCCCCAGGGACCGAACGTCCAGCATCAGAGCCACATTaGAGCCCCGCCTGCAGGCATAGCCCACCACTGCCTAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: VLRPPGTERPASEPH*SPACRHSPPLPSEH
Trigger: GTGCTCACTAGGCAGTGGTGGGCTATGCCTGCAGGCGGGGCTCCAATGTGGCTCTGATGCTGGACGTTCGGTCCCTGGGGGCCGTAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS GCA 90 bp GAGGTCTGCCTGAAAGACAGGGCCCTCCGCTGCTGTTCTCTGGCCTaGCTGATTGGCCAGAAGGAGGCTCCCATGCCAGGCCAGGTTTGC +
Preference number: 5 (lower is better)
Translates to: EVCLKDRALRCCSLA*LIGQKEAPMPGQVC
Trigger: GCAAACCTGGCCTGGCATGGGAGCCTCCTTCTGGCCAATCAGGCAGGCCAGAGAACAGCAGCGGAGGGCCCTGTCTTTCAGGCAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS GCA 90 bp GGCTCACTCAGCCATGAGGTCTGCCTGAAAGACAGGGCCCTCCGCTaGTGTTCTCTGGCCTGCCTGATTGGCCAGAAGGAGGCTCCCATG +
Preference number: 5 (lower is better)
Translates to: GSLSHEVCLKDRALR*CSLACLIGQKEAPM
Trigger: CATGGGAGCCTCCTTCTGGCCAATCAGGCAGGCCAGAGAACAGCAGCGGAGGGCCCTGTCTTTCAGGCAGACCTCATGGCTGAGTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CAA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCGTCTTGTATCGGTCCTaGGAGGCGTGGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: QLSGAACLVMRHLTFIPIVLYRS*EAWPGM
Trigger: CATCCCTGGCCACGCCTCCAAGGACCGATACAAGAC...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS TCA 90 bp CTTTGTCACATCCAGCCGCTGCCTACTTGCTGGGCACAGCTCGCCTaGCCCCCAGCTCTGTGCTGTCCCACAAAGAACCCAAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LCHIQPLPTCWAQLA*PPALCCPTKNPRLS
Trigger: GGAGAGCCTTGGGTTCTTTGTGGGACAGCACAGAGCTGGGGGTCAGGCGAGCTGTGCCCAGCAAGTAGGCAGCGGCTGGATGTGACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS TCA 90 bp ACCAAGAATTCTTCTTCCAGTTGCTTGGGGCTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGGGGGTGTCCAGCAGTGCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: TKNSSSSCLGLGGWR*RAQRVRGCPAVRRK
Trigger: CTTTCTGCGCACTGCTGGACACCCCCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTCTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491584.1
CDS CCA 90 bp CCTGAAAGACAGGGCCCTCCGCTGCTGTTCTCTGGCCTGCCTGATTaGCCAGAAGGAGGCTCCCATGCCAGGCCAGGTTTGCACTCTGTT +
Preference number: 5 (lower is better)
Translates to: PERQGPPLLFSGLPD*PEGGSHARPGLHSV
Trigger: AACAGAGTGCAAACCTGGCCTGGCATGGGAGCCTCCTTCTGGCCAATCAGGCAGGCCAGAGAACAGCAGCGGAGGGCCCTGTCTTTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CAA 90 bp TTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGCCAGCCGCTGCCTACTaGCTGGGCACAGCTCGCCTG +
Preference number: 5 (lower is better)
Translates to: FDWGHPALPMCGQGAESLPAAAY*LGTARL
Trigger: CAGGCGAGCTGTGCCCAGCAAGTAGGCAGCGGCTGG...CAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCAGCATCAGAGCCACATaGGAGCCCCGCCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: EGCSFSQVDSEESWFSRASIRAT*EPRLSC
Trigger: GCAGGAGAGGCGGGGCTCCAATGTGGCTCTGATGCT...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGAGCATCAGAGCCACATaGGAGCCCCGCCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WSGQAEKRMCFTDRRSSWSIRAT*EPRLSC
Trigger: GCAGGAGAGGCGGGGCTCCAATGTGGCTCTGATGCT...CCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462815.5
CDS-3UTR CAA 90 bp CAGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCAGAATTCTTCTTCCAGTaGCTTGGGGCTGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: QRAGIKAAVRGGVPGDAAEFFFQ*LGAGWL
Trigger: CAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTC...TGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp AGAGAGCTGGTATCAAGGCAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATTCGGGCTTTCAGCTGTaGACAGCCAATTCGCGTGGC +
Preference number: 5 (lower is better)
Translates to: RELVSRQLSGAACLVMRHSGFQL*TANSRG
Trigger: GCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGA...ATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTGCCTTGATACCAGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GTGGACTACGATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 5 (lower is better)
Translates to: VDYDRPGVGGCLRALLHLKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...GAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTATCGTAGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CAA 90 bp ATAGGCCCGGGGTGGGCGGCTGTCTCCGGGCTCTCCTCCACCTCTGCCACTAGGCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 5 (lower is better)
Translates to: IGPGWAAVSGLSSTSATRPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...CCTAGTGGCAGAGGTGGAGGAGAGCCCGGAGACAGCCGCCCACCCCGGGCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS TCA 90 bp TTCAAGAATTCTTCTTCCAGTTGCTTGGGGCTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGGGGGTGTCCAGCAGTGCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: FKNSSSSCLGLGGWR*RAQRVRGCPAVRRK
Trigger: CTTTCTGCGCACTGCTGGACACCCCCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTCTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000435759.6
ENST00000462815.5
ENST00000464870.5
ENST00000476061.5
ENST00000477554.5
ENST00000486116.5
ENST00000492977.5
ENST00000495688.5
ENST00000496197.5
ENST00000629151.2
CDS TCA 90 bp ATCAAGAATTCTTCTTCCAGTTGCTTGGGGCTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGGGGGTGTCCAGCAGTGCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: IKNSSSSCLGLGGWR*RAQRVRGCPAVRRK
Trigger: CTTTCTGCGCACTGCTGGACACCCCCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTCTTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467283.5
CDS TCA 90 bp ATCGGTCCTTGGAGGCGTGGCCAGGGATGTCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCTTTGAAGCAGCTGTGGCCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: IGPWRRGQGCPGLRG*QSLKGSLKQLWPPG
Trigger: GCCTGGGGGCCACAGCTGCTTCAAAGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGGACATCCCTGGCCACGCCTCCAAGGACCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477625.5
CDS GCA 90 bp CCCTCTTCTGTGTTTCTCCTCTGGGTCTTTGTCACATCCAGCCGCTaGCTACTTGCTGGGCACAGCTCGCCTGACCCCCAGCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: PSSVFLLWVFVTSSR*LLAGHSSPDPQLCA
Trigger: AGCACAGAGCTGGGGGTCAGGCGAGCTGTGCCCAGCAAGTAGGCAGCGGCTGGATGTGACAAAGACCCAGAGGAGAAACACAGAAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGAAGCATCAGAGCCACATaGGAGCCCCGCCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LFPILASGLCLGRTSGEGSIRAT*EPRLSC
Trigger: GCAGGAGAGGCGGGGCTCCAATGTGGCTCTGATGCT...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCGTCTTGTATCGGTCCTaGGAGGCGTGGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCVLYRS*EAWPGM
Trigger: CATCCCTGGCCACGCCTCCAAGGACCGATACAAGAC...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGAAGTCCGACACAGTGTaGGGCATGGGGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMKSDTV*GMGPWV
Trigger: CACCCAGGGCCCCATGCCCAACACTGTGTCGGACTT...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 5 (lower is better)
Translates to: LLLPVTASTTKEALLPHTEEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...GGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000496197.5
CDS-3UTR CAA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGGCATCTGGCCTGTGCTaGGGCAGGACCTCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMASGLC*GRTSGE
Trigger: TTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGC...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS GCA 90 bp CCAGGGACCGAACGTCCAGCATCAGAGCCACATTGGAGCCCCGCCTaGAGGCATAGCCCACCACTGCCTAGTGAGCACCCAATCATATTT +
Preference number: 5 (lower is better)
Translates to: PGTERPASEPHWSPA*RHSPPLPSEHPIIF
Trigger: AAATATGATTGGGTGCTCACTAGGCAGTGGTGGGCTATGCCTGCAGGCGGGGCTCCAATGTGGCTCTGATGCTGGACGTTCGGTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS CCA 90 bp AGGTTTCCTCTTCAAGAATTCTTCTTCCAGTTGCTTGGGGCTGGGTaGCTGGCGCTGAAGGGCCCAGCGGGTAAGGGGGTGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: RFPLQEFFFQLLGAG*LALKGPAGKGVSSS
Trigger: ACTGCTGGACACCCCCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTCTTGAAGAGGAAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000629151.2
CDS-3UTR CAA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGTTCTCCTCTGGGTCTTaGTCACATCCAGCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: PVTASTTKEALLPHTNPRFSSGS*SHPAAA
Trigger: GGCAGCGGCTGGATGTGACAAAGACCCAGAGGAGAA...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp GGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGAATTCTTCTTCCAGTaGCTTGGGGCTGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GAACLVMRHLTFIPISEWEFFFQ*LGAGWL
Trigger: CAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTC...CCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TTACTGCTGCTGCTTCCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCAAGTCCGACACAGTGTaGGGCATGGGGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LLLLLPVTASTTKEALLPKSDTV*GMGPWV
Trigger: CACCCAGGGCCCCATGCCCAACACTGTGTCGGACTT...GGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGGAAGCAGCAGCAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCTCGGGCTTTCAGCTGTaGACAGCCAATTCGCGTGGC +
Preference number: 5 (lower is better)
Translates to: EGCSFSQVDSEESWFSRASGFQL*TANSRG
Trigger: GCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGA...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GAGGGGTGCTCATTCTCTCAGGTAGACAGTGAGGAGTCCTGGTTCAGCCGAGCCCTGGAATCCGGCCCCTaGTCCTTACTGCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: EGCSFSQVDSEESWFSRALESGP*SLLLLL
Trigger: AAGCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAG...GGCTCGGCTGAACCAGGACTCCTCACTGTCTACCTGAGAGAATGAGCACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GAGTGGCCAGTGTTGAAGACCTGGAATCCGGCCCCTTGTCCTTACTGCTGCTGCCTGGAATCCGGCCCCTaGTCCTTACTGCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: EWPVLKTWNPAPCPYCCCLESGP*SLLLLL
Trigger: AAGCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAG...GCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAGGTCTTCAACACTGGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS CCA 90 bp CCAATTTCTTACCAAGAATTCTTCTTCCAGTTGCTTGGGGCTGGGTaGCTGGCGCTGAAGGGCCCAGCGGGTAAGGGGGTGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: PISYQEFFFQLLGAG*LALKGPAGKGVSSS
Trigger: ACTGCTGGACACCCCCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTCTTGGTAAGAAATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491584.1
CDS-3UTR CAA 90 bp TCCTCGGGCTTTCAGCTGTTGACAGCCAATTCGCGTGGCGATGAAGCAGCCCGTGAATTCTTCTTCCAGTaGCTTGGGGCTGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSGFQLLTANSRGDEAAREFFFQ*LGAGWL
Trigger: CAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTC...ACGGGCTGCTTCATCGCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CAA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 5 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSEEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CAGCTGTCAGGGGCGGCGTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCCCCCTGGAAATTGTGTaGATGCTGAGATGGATGAGG +
Preference number: 5 (lower is better)
Translates to: QLSGAACLVMRHLTFIPIPLEIV*MLRWMR
Trigger: CCTCATCCATCTCAGCATCAACACAATTTCCAGGGG...GATGGGGATGAAGGTAAGATGCCGCATCACCAGGCACGCCGCCCCTGACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS TCA 90 bp ATCGGTCCTTGGAGGCGTGGCCAGGGATGTCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCTTCTCTCCTGCAGTCGCACATGCTT +
Preference number: 5 (lower is better)
Translates to: IGPWRRGQGCPGLRG*QSLKGSSLLQSHML
Trigger: AAGCATGTGCGACTGCAGGAGAGAAGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGGACATCCCTGGCCACGCCTCCAAGGACCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479092.5
ENST00000480836.5
CDS-3UTR CAA 90 bp TCTTTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCAGATAGCAGAGTCCACTaGTGGGAGGGAGTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: SFDWGHPALPMCGQGAESDSRVH*WEGVRG
Trigger: CCCTCGGACTCCCTCCCACAAGTGGACTCTGCTATC...TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCAGCATCAGAGCCACATaGGAGCCCCGCCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGSIRAT*EPRLSC
Trigger: GCAGGAGAGGCGGGGCTCCAATGTGGCTCTGATGCT...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGTCTTCTTCCAGTTGCTaGGGGCTGGGTGGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: RHLTFIPISEWAASLRFKSSSSC*GLGGWR
Trigger: GCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGA...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GTAGTGGACACATTTCTCCTTGCCCTCTCGGAGCTGAGTGAGCATGACAATGAGTCTTCTTCCAGTTGCTaGGGGCTGGGTGGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: VVDTFLLALSELSEHDNESSSSC*GLGGWR
Trigger: GCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGA...CTCATTGTCATGCTCACTCAGCTCCGAGAGGGCAAGGAGAAATGTGTCCACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496197.5
CDS-3UTR CAA 90 bp GTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGGAATTCTTCTTCCAGTaGCTTGGGGCTGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: VPGDAASYLHPHLRMGSQEFFFQ*LGAGWL
Trigger: CAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTC...CTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCGCTCTTCCTGGTACGAATTCTTCTTCCAGTaGCTTGGGGCTGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SGQAEKRMCFTDRRSSWYEFFFQ*LGAGWL
Trigger: CAGCCACCCAGCCCCAAGCAACTGGAAGAAGAATTC...GTACCAGGAAGAGCGCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CAA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTCCCACCTTCCCAGGCTaGAGGGAGGTAGGCACCTGG +
Preference number: 5 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSPTFPG*REVGTW
Trigger: CCAGGTGCCTACCTCCCTCAAGCCTGGGAAGGTGGG...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS CCA 90 bp CTCCCTCAAGGCCCTCTCCCTCAAAGCCCTTGCTGCTTCAAGCCTTaGGAATTCATGGCCAAGCACAGACCACATCTTCCCAGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: LPQGPLPQSPCCFKP*EFMAKHRPHLPRAD
Trigger: ATCTGCTCTGGGAAGATGTGGTCTGTGCTTGGCCATGAATTCCCAAGGCTTGAAGCAGCAAGGGCTTTGAGGGAGAGGGCCTTGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp CTGGTGTCTGATGGTCTGGCCAGGCCGAAAAGAGGATGTGCTTTACTGACCGGCTTTGGCAAGATGGTCTaGTATCGGTCCTTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LVSDGLARPKRGCALLTGFGKMV*YRSLEA
Trigger: CGCCTCCAAGGACCGATACAAGACCATCTTGCCAAA...GCCGGTCAGTAAAGCACATCCTCTTTTCGGCCTGGCCAGACCATCAGACACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GTGCCTGGTGATGCGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTTTGGCAAGATGGTCTaGTATCGGTCCTTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: VPGDAASYLHPHLRMGSQFGKMV*YRSLEA
Trigger: CGCCTCCAAGGACCGATACAAGACCATCTTGCCAAA...CTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCGCATCACCAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGGAGGAGGAATCCTGAGGTGTGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 5 (lower is better)
Translates to: HLRMGSQSQIQGGGILRCEEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...ACACCTCAGGATTCCTCCTCCTTGAATCTGAGACTGGCTGCCCATTCTGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCACTGATAGGATGCTTGGAATCACCCTTTaGTCAGCCCCAGGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: GSSSPSDVWSGSRVTDRMLGITL*SAPGRS
Trigger: ACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAG...CATCCTATCAGTGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGACCTCGGGTGAAGGAGACTTTTCCCCATTCTaGCATCTGGCCTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: LFPILASGLCLGRTSGEGDFSPF*HLACAW
Trigger: CCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTC...TCCTTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp AGATTTCAACTGCCAGGCCTGGTCACCTCTGTAGCCTACTCTTATGACACATGGAGGCCTCCAGCAGTGTaGGAGCTGGTTGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RFQLPGLVTSVAYSYDTWRPPAV*ELVGQP
Trigger: TGGCTGCCCAACCAGCTCCAACACTGCTGGAGGCCT...CCATGTGTCATAAGAGTAGGCTACAGAGGTGACCAGGCCTGGCAGTTGAAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS CCA 90 bp TGTTGGCCTTGTTTACACCCACAGACCCACCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: CWPCLHPQTHLSSRS*HTIPRMSTSPRAFS
Trigger: GCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAGGTGGGTCTGTGGGTGTAAACAAGGCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS-3UTR CAA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCATCTTCTTCCAGTTGCTaGGGGCTGGGTGGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPSSSSC*GLGGWR
Trigger: GCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGA...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCTCTTCTTCCAGTTGCTaGGGGCTGGGTGGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: VSENTRTPGLLSLSVINASSSSC*GLGGWR
Trigger: GCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGA...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CAA 90 bp ACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTCCTGCAGTCTTGTATCGGTCCTaGGAGGCGTGGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: TAKLSRCTQQMQGIVGPAVLYRS*EAWPGM
Trigger: CATCCCTGGCCACGCCTCCAAGGACCGATACAAGAC...TGCAGGACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CTGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTTGGCAAGATGGTCTaGTATCGGTCCTTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LSSRSWHTIPRMSTSPRAFGKMV*YRSLEA
Trigger: CGCCTCCAAGGACCGATACAAGACCATCTTGCCAAA...AGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACAAGTCCGACACAGTGTaGGGCATGGGGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNKSDTV*GMGPWV
Trigger: CACCCAGGGCCCCATGCCCAACACTGTGTCGGACTT...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTTCGGGCTTTCAGCTGTaGACAGCCAATTCGCGTGGC +
Preference number: 5 (lower is better)
Translates to: AVGTQYPECPLLLGLSAVSGFQL*TANSRG
Trigger: GCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGA...AACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462815.5
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCCCACCTTCCCAGGCTaGAGGGAGGTAGGCACCTGG +
Preference number: 5 (lower is better)
Translates to: CLREHQDTWASFFVCHKCPTFPG*REVGTW
Trigger: CCAGGTGCCTACCTCCCTCAAGCCTGGGAAGGTGGG...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309017.7
ENST00000367279.8
CDS-3UTR CAA 90 bp CCTGTGACTGCAAGCACCACTAAGGAGGCACTCCTTCCCCACACCAACCCAAGGCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 5 (lower is better)
Translates to: PVTASTTKEALLPHTNPRPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...CCTTGGGTTGGTGTGGGGAAGGAGTGCCTCCTTAGTGGTGCTTGCAGTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000496197.5
CDS-3UTR CAA 90 bp AACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTGCATCTGGCCTGTGCTaGGGCAGGACCTCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: NTRTPGLLSLSVINASSCASGLC*GRTSGE
Trigger: TTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGC...ACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp AGCCGAGCCTCCATGTCTGCATGGATGGTTATGACCCTGATTGTTTTTGGAAACGCATCTGGCCTGTGCTaGGGCAGGACCTCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: SRASMSAWMVMTLIVFGNASGLC*GRTSGE
Trigger: TTCACCCGAGGTCCTGCCCAAGCACAGGCCAGATGC...GTTTCCAAAAACAATCAGGGTCATAACCATCCATGCAGACATGGAGGCTCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp AGATCAGGACCAGACTTTTCCCCATTCTTGCATCTGGCCTGTGCTTGGGCAGGATTTGGCAAGATGGTCTaGTATCGGTCCTTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: RSGPDFSPFLHLACAWAGFGKMV*YRSLEA
Trigger: CGCCTCCAAGGACCGATACAAGACCATCTTGCCAAA...TCCTGCCCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTCTGGTCCTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp AGGATGATCTTGGAATCACCCTTTTGTCAGCCCCAGGAAGGAGTGGCTGGAGTGCACGGCTCTGGGGATTaGGCAAGATGGTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: RMILESPFCQPQEGVAGVHGSGD*ARWSCI
Trigger: GATACAAGACCATCTTGCCAAATCCCCAGAGCCGTG...CACTCCAGCCACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAGATCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TGTCTAGCCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTCACGGCTCTGGGGATTaGGCAAGATGGTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: CLAAVGTQYPECPLLLGLHGSGD*ARWSCI
Trigger: GATACAAGACCATCTTGCCAAATCCCCAGAGCCGTG...AAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp AGGTATAGTGGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAAGTCCGACACAGTGTaGGGCATGGGGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RYSGSCIPRVLFEPWKQNKSDTV*GMGPWV
Trigger: CACCCAGGGCCCCATGCCCAACACTGTGTCGGACTT...GTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCCACTATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp AACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 5 (lower is better)
Translates to: NTRTPGLLSLSVINASSCEEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...ACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CAA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 5 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS TCA 90 bp ATCGGTCCTTGGAGGCGTGGCCAGGGATGTCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCTTCAAGAATTCTTCTTCCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: IGPWRRGQGCPGLRG*QSLKGSSRILLPVA
Trigger: AGCAACTGGAAGAAGAATTCTTGAAGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGGACATCCCTGGCCACGCCTCCAAGGACCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000435759.6
ENST00000464870.5
ENST00000476061.5
ENST00000477554.5
ENST00000486116.5
ENST00000492977.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCCTGCTCAACCTGACCTaGGCCGGAGGCTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCLLNLT*AGGLFL
Trigger: GAGAAATAAGCCTCCGGCCAAGGTCAGGTTGAGCAG...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp GCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGTTCACGGCTCTGGGGATTaGGCAAGATGGTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: AVGTQYPECPLLLGLSAVHGSGD*ARWSCI
Trigger: GATACAAGACCATCTTGCCAAATCCCCAGAGCCGTG...AACAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480836.5
ENST00000496197.5
CDS-3UTR CAA 90 bp AGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCTCGGGCTTTCAGCTGTaGACAGCCAATTCGCGTGGC +
Preference number: 5 (lower is better)
Translates to: REHQDTWASFFVCHKCQLSGFQL*TANSRG
Trigger: GCCACGCGAATTGGCTGTCAACAGCTGAAAGCCCGA...GAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CAA 90 bp CCAGCTGTTCTCCAGATCCAACTCCTCGGGGGTTTCCACAGAGAGCTGGTATCAAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 5 (lower is better)
Translates to: PAVLQIQLLGGFHRELVSKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...TGATACCAGCTCTCTGTGGAAACCCCCGAGGAGTTGGATCTGGAGAACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CCGCAGTTGGCACACAATACCCAGAATGTCCACTTCTCCTCGGGCTTTCAGCTGCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 5 (lower is better)
Translates to: PQLAHNTQNVHFSSGFQLPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...CAGCTGAAAGCCCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462815.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGGAGCAGCTCCTCTTaGCCTCTGAGTAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: VSENTRTPGLLSLSVINARSSSS*PLSSPH
Trigger: GTGGGGACTACTCAGAGGCAAAGAGGAGCTGCTCCT...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGAAGGACAGGATCTATTaGGTGGGACCCAGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: RHLTFIPISEWAASLRFKKDRIY*VGPRAE
Trigger: TTCTGCCCTGGGTCCCACCAAATAGATCCTGTCCTT...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CAA 90 bp GGGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCCATGCCAGGCCAGGTTaGCACTCTGTTTTCACTGGG +
Preference number: 5 (lower is better)
Translates to: GSCIPRVLFEPWKQNRDCHARPG*HSVFTG
Trigger: CCCAGTGAAAACAGAGTGCAAACCTGGCCTGGCATG...GCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS-3UTR CAA 90 bp TCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCTCCCTCAAAGCCCTaGCTGCTTCAAGCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: SENTRTPGLLSLSVINASSPSKP*LLQALG
Trigger: TCCCAAGGCTTGAAGCAGCAAGGGCTTTGAGGGAGA...GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCTCTGTCGGTCTGTCTTaGAGGGCTGAGAAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: VSENTRTPGLLSLSVINASVGLS*RAEKAP
Trigger: TGGAGCCTTCTCAGCCCTCAAAGACAGACCGACAGA...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGACTTTTCCCCATTCTaGCATCTGGCCTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSDFSPF*HLACAW
Trigger: CCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTC...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TCTTTTGATTGGGGTCATCCAGCCCTTCCGATGTGTGGTCAGGGAGCAGAGTCAGTCACTGATAGGATGTaGAGACTTGGAGATCAGGAC +
Preference number: 5 (lower is better)
Translates to: SFDWGHPALPMCGQGAESVTDRM*RLGDQD
Trigger: GTCCTGATCTCCAAGTCTCAACATCCTATCAGTGAC...TGACTCTGCTCCCTGACCACACATCGGAAGGGCTGGATGACCCCAATCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCAGGAGCAGCTCCTCTTaGCCTCTGAGTAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: CLREHQDTWASFFVCHKCRSSSS*PLSSPH
Trigger: GTGGGGACTACTCAGAGGCAAAGAGGAGCTGCTCCT...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp CGGCATCTTACCTTCATCCCCATCTCAGAATGGGCAGCCAGTCTCAGATTCAAGCCCCTGGAAATTGTGTaGATGCTGAGATGGATGAGG +
Preference number: 5 (lower is better)
Translates to: RHLTFIPISEWAASLRFKPLEIV*MLRWMR
Trigger: CCTCATCCATCTCAGCATCAACACAATTTCCAGGGG...CTTGAATCTGAGACTGGCTGCCCATTCTGAGATGGGGATGAAGGTAAGATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGGTCTTGTATCGGTCCTaGGAGGCGTGGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: WASFFVCHKCQLLSLSSEVLYRS*EAWPGM
Trigger: CATCCCTGGCCACGCCTCCAAGGACCGATACAAGAC...CTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGTTTGGCAAGATGGTCTaGTATCGGTCCTTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: APVFKFRETLEVPLTVHLFGKMV*YRSLEA
Trigger: CGCCTCCAAGGACCGATACAAGACCATCTTGCCAAA...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGCACGGCTCTGGGGATTaGGCAAGATGGTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: APVFKFRETLEVPLTVHLHGSGD*ARWSCI
Trigger: GATACAAGACCATCTTGCCAAATCCCCAGAGCCGTG...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp AACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTGGAATCACCCTTTaGTCAGCCCCAGGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: NTRTPGLLSLSVINASSCLGITL*SAPGRS
Trigger: ACTCCTTCCTGGGGCTGACAAAAGGGTGATTCCAAG...ACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCGACTTTTCCCCATTCTaGCATCTGGCCTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: VSENTRTPGLLSLSVINADFSPF*HLACAW
Trigger: CCAAGCACAGGCCAGATGCAAGAATGGGGAAAAGTC...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTGGCGTCACTGATAGGATGTaGAGACTTGGAGATCAGGAC +
Preference number: 5 (lower is better)
Translates to: WKQNRDCLASLRVVGGSGVTDRM*RLGDQD
Trigger: GTCCTGATCTCCAAGTCTCAACATCCTATCAGTGAC...GCCACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GCATTAGGGAAATCATCCTCAGTTTTAGCACTGCGTGTTCTTCAGGAGAGAAGTAGGAGCAGCTCCTCTTaGCCTCTGAGTAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ALGKSSSVLALRVLQERSRSSSS*PLSSPH
Trigger: GTGGGGACTACTCAGAGGCAAAGAGGAGCTGCTCCT...ACTTCTCTCCTGAAGAACACGCAGTGCTAAAACTGAGGATGATTTCCCTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TTCCCCTTACTGTCCATCTGGGGCCAACAGAGGAAGCAGAGGAGTGGCCAGTGTTCTTTATTTTCCCACTaGGTTACTGTTCTGGAGCTT +
Preference number: 5 (lower is better)
Translates to: FPLLSIWGQQRKQRSGQCSLFSH*VTVLEL
Trigger: AAGCTCCAGAACAGTAACCAAGTGGGAAAATAAAGA...ACACTGGCCACTCCTCTGCTTCCTCTGTTGGCCCCAGATGGACAGTAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS TCA 90 bp GAAGGCTGTGGGCCTTGCCTGGAATTTAGGGAGCAGGCTCATGGTTaGTATGAAACTCTGTGCTCCAGACATGCAAAAGACATGCAAATG +
Preference number: 5 (lower is better)
Translates to: EGCGPCLEFREQAHG*YETLCSRHAKDMQM
Trigger: CATTTGCATGTCTTTTGCATGTCTGGAGCACAGAGTTTCATATCAACCATGAGCCTGCTCCCTAAATTCCAGGCAAGGCCCACAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468385.1
CDS-3UTR CAA 90 bp GTGGAGGCAAGGGTAACCAGAGTCCTTGTTCTTTCTTTTGATTGGGGTCATCCATTGCTGCTTCAAGCCTaGGGAATTCATGGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: VEARVTRVLVLSFDWGHPLLLQA*GIHGQA
Trigger: TGCTTGGCCATGAATTCCCAAGGCTTGAAGCAGCAA...TGGATGACCCCAATCAAAAGAAAGAACAAGGACTCTGGTTACCCTTGCCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS-3UTR CAA 90 bp TCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACATTCTTCTTCCAGTTGCTaGGGGCTGGGTGGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SFFVCHKCQLLSLSSERHSSSSC*GLGGWR
Trigger: GCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGA...ATGTCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp CATGTTATAGAACAGGAAACTGAAGCTCACAAAGAGTGTCTCAGAGAACACCAGCTGGAATCCGGCCCCTaGTCCTTACTGCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: HVIEQETEAHKECLREHQLESGP*SLLLLL
Trigger: AAGCAGCAGCAGTAAGGACAAGGGGCCGGATTCCAG...CTGGTGTTCTCTGAGACACTCTTTGTGAGCTTCAGTTTCCTGTTCTATAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
CDS-3UTR CAA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGAGAGGAGTGGCCAGTGTaGAAGACCTGGAATCCGGCC +
Preference number: 5 (lower is better)
Translates to: ASFFVCHKCQLLSLSSEREEWPV*KTWNPA
Trigger: GGCCGGATTCCAGGTCTTCAACACTGGCCACTCCTC...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp CACAAAGAGTGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCCCCTGGAAATTGTGTaGATGCTGAGATGGATGAGG +
Preference number: 5 (lower is better)
Translates to: HKECLREHQDTWASFFVCPLEIV*MLRWMR
Trigger: CCTCATCCATCTCAGCATCAACACAATTTCCAGGGG...ACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACACTCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GCTCCTGTCTTTAAGTTCAGAGAGACATTGGAGGTTCCCCTTACTGTCCATCTGAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 5 (lower is better)
Translates to: APVFKFRETLEVPLTVHLKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...CAGATGGACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTTAAAGACAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000462815.5
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp GGTCCTGCATACCCAGGGTATTATTTGAGCCATGGAAGCAAAACAGAGACTGCTCCTGGGCTTCTTTCTTaGTCTGTCATAAATGCCAGC +
Preference number: 5 (lower is better)
Translates to: GPAYPGYYLSHGSKTETAPGLLS*SVINAS
Trigger: GCTGGCATTTATGACAGACAAAGAAAGAAGCCCAGG...AGCAGTCTCTGTTTTGCTTCCATGGCTCAAATAATACCCTGGGTATGCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TTGGAAACAGCCAAGCTCTCTAGGTGTACTCAGCAAATGCAAGGTATAGTGGGTAAGTTCAGAGAGACATaGGAGGTTCCCCTTACTGTC +
Preference number: 5 (lower is better)
Translates to: LETAKLSRCTQQMQGIVGKFRET*EVPLTV
Trigger: GACAGTAAGGGGAACCTCCAATGTCTCTCTGAACTT...ACCCACTATACCTTGCATTTGCTGAGTACACCTAGAGAGCTTGGCTGTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp TGTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCGTCACTGATAGGATGTaGAGACTTGGAGATCAGGAC +
Preference number: 5 (lower is better)
Translates to: CLREHQDTWASFFVCHKCVTDRM*RLGDQD
Trigger: GTCCTGATCTCCAAGTCTCAACATCCTATCAGTGAC...GCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GCTTCTTTCTTTGTCTGTCATAAATGCCAGCTCCTGTCTTTAAGTTCAGAGAGACACGGCTCTGGGGATTaGGCAAGATGGTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: ASFFVCHKCQLLSLSSERHGSGD*ARWSCI
Trigger: GATACAAGACCATCTTGCCAAATCCCCAGAGCCGTG...TCTCTCTGAACTTAAAGACAGGAGCTGGCATTTATGACAGACAAAGAAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
ENST00000496197.5
CDS-3UTR CAA 90 bp CCATGGAAGCAAAACAGAGACTGCTTAGCCTCCCTAAGAGTAGTTGGTGGGAGTTCTTTATTTTCCCACTaGGTTACTGTTCTGGAGCTT +
Preference number: 5 (lower is better)
Translates to: PWKQNRDCLASLRVVGGSSLFSH*VTVLEL
Trigger: AAGCTCCAGAACAGTAACCAAGTGGGAAAATAAAGA...ACTCCCACCAACTACTCTTAGGGAGGCTAAGCAGTCTCTGTTTTGCTTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS-3UTR CAA 90 bp GTCTCAGAGAACACCAGGACACCTGGGCTTCTTTCTTTGTCTGTCATAAATGCCTCTTTATTTTCCCACTaGGTTACTGTTCTGGAGCTT +
Preference number: 5 (lower is better)
Translates to: VSENTRTPGLLSLSVINASLFSH*VTVLEL
Trigger: AAGCTCCAGAACAGTAACCAAGTGGGAAAATAAAGA...GGCATTTATGACAGACAAAGAAAGAAGCCCAGGTGTCCTGGTGTTCTCTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000495688.5
CDS CCA 72 bp CCACCAGGGGTCGGCTGCCTCCCGCCTGTGCCCTTCTaGGGCCCAAGGCCCCGTTCCCTGGGAATGGGTGAG +
Preference number: 6 (lower is better)
Translates to: PPGVGCLPPVPF*GPRPRSLGMGE
Trigger: CTCACCCATTCCCAGGGAACGGGGCCTTGGGCCCCAGAAGGGCACAGGCGGGAGGCAGCCGACCCCTGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS TCA 72 bp GTGGGGTGCTGGGCCCAGGGGAGGCTCACTCAGCCATaGGGTCTGCCTGAAAGACAGGGCCCTCCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: VGCWAQGRLTQP*GLPERQGPPLL
Trigger: CAGCAGCGGAGGGCCCTGTCTTTCAGGCAGACCTCATGGCTGAGTGAGCCTCCCCTGGGCCCAGCACCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS CCA 72 bp CCCCCAGGGACCGAACGTCCAGCATCAGAGCCACATTaGAGCCCCGCCTGCAGGCATAGCCCACCACTCTCC +
Preference number: 6 (lower is better)
Translates to: PPGTERPASEPH*SPACRHSPPLS
Trigger: GGAGAGTGGTGGGCTATGCCTGCAGGCGGGGCTCCAATGTGGCTCTGATGCTGGACGTTCGGTCCCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435759.6
CDS CCA 72 bp CCCCCAGGGACCGAACGTCCAGCATCAGAGCCACATTaGAGCCCCGCCTGCAGGCATAGCCCACCACTGCCT +
Preference number: 6 (lower is better)
Translates to: PPGTERPASEPH*SPACRHSPPLP
Trigger: AGGCAGTGGTGGGCTATGCCTGCAGGCGGGGCTCCAATGTGGCTCTGATGCTGGACGTTCGGTCCCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS TCA 72 bp TCTTCTTCCAGTTGCTTGGGGCTGGGTGGCTGGCGCTaGAGGGCCCAGCGGGTAAGGGGGTGTCCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: SSSSCLGLGGWR*RAQRVRGCPAV
Trigger: CACTGCTGGACACCCCCTTACCCGCTGGGCCCTTCAGCGCCAGCCACCCAGCCCCAAGCAACTGGAAGAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000435759.6
ENST00000462815.5
ENST00000464870.5
ENST00000467283.5
ENST00000476061.5
ENST00000477554.5
ENST00000486116.5
ENST00000491584.1
ENST00000492451.1
ENST00000492977.5
ENST00000495688.5
ENST00000496197.5
ENST00000629151.2
CDS GCA 72 bp GCTGGGCCCAGGGGAGGCTCACTCAGCCATGAGGTCTaGCTGAAAGACAGGGCCCTCCGCTGCTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: AGPRGGSLSHEV*LKDRALRCCSL
Trigger: CAGAGAACAGCAGCGGAGGGCCCTGTCTTTCAGGCAGACCTCATGGCTGAGTGAGCCTCCCCTGGGCCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS CCA 72 bp CCCATGTCCTCTTCGCTGCTGGGGTGCCTGGATGCCTaGGACCTGAAGGGTGGCCCCCAAGTCCAAGACTCC +
Preference number: 6 (lower is better)
Translates to: PMSSSLLGCLDA*DLKGGPQVQDS
Trigger: GGAGTCTTGGACTTGGGGGCCACCCTTCAGGTCCCAGGCATCCAGGCACCCCAGCAGCGAAGAGGACATGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309017.7
ENST00000477554.5
ENST00000492451.1
CDS CCA 72 bp CCAGCCCAGCAGGAAGCAGATAGCAGAGTCCACTTGTaGGAGGGAGTCCGAGGGGCTTCCCCTGGGCCCTCA +
Preference number: 6 (lower is better)
Translates to: PAQQEADSRVHL*EGVRGASPGPS
Trigger: TGAGGGCCCAGGGGAAGCCCCTCGGACTCCCTCCCACAAGTGGACTCTGCTATCTGCTTCCTGCTGGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS TCA 72 bp ATCCAGCCGCTGCCTACTTGCTGGGCACAGCTCGCCTaGCCCCCAGCTCTGTGCTGTCCCACAAAGAACCCA +
Preference number: 6 (lower is better)
Translates to: IQPLPTCWAQLA*PPALCCPTKNP
Trigger: TGGGTTCTTTGTGGGACAGCACAGAGCTGGGGGTCAGGCGAGCTGTGCCCAGCAAGTAGGCAGCGGCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS GCA 72 bp GAACGTCCAGCATCAGAGCCACATTGGAGCCCCGCCTaGAGGCATAGCCCACCACTCTCCTGCAGTCGCACA +
Preference number: 6 (lower is better)
Translates to: ERPASEPHWSPA*RHSPPLSCSRT
Trigger: TGTGCGACTGCAGGAGAGTGGTGGGCTATGCCTGCAGGCGGGGCTCCAATGTGGCTCTGATGCTGGACGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435759.6
CDS GCA 72 bp GAACGTCCAGCATCAGAGCCACATTGGAGCCCCGCCTaGAGGCATAGCCCACCACTGCCTAGTGAGCACCCA +
Preference number: 6 (lower is better)
Translates to: ERPASEPHWSPA*RHSPPLPSEHP
Trigger: TGGGTGCTCACTAGGCAGTGGTGGGCTATGCCTGCAGGCGGGGCTCCAATGTGGCTCTGATGCTGGACGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS CAA 90 bp CTGTGTTTCTCCTCTGGGTCTTTGTCACATCCAGCCGCTGCCTACTaGCTGGGCACAGCTCGCCTGACCCCCAGCTCTGTGCTGTCCCAC +
Preference number: 6 (lower is better)
Translates to: LCFSSGSLSHPAAAY*LGTARLTPSSVLSH
Trigger: GTGGGACAGCACAGAGCTGGGGGTCAGGCGAGCTGTGCCCAGCAAGTAGGCAGCGGCTGGATGTGACAAAGACCCAGAGGAGAAACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS TCA 72 bp GGTGCCCGTGAGAGAATGGTTCCAGCTGGCTGCCTCTaGTACAGAGGGCAGAGCGATTCAGAGGGGACCCCA +
Preference number: 6 (lower is better)
Translates to: GARERMVPAGCL*YRGQSDSEGTP
Trigger: TGGGGTCCCCTCTGAATCGCTCTGCCCTCTGTATCAGAGGCAGCCAGCTGGAACCATTCTCTCACGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491584.1
CDS GCA 72 bp AGCCATGAGGTCTGCCTGAAAGACAGGGCCCTCCGCTaGTGTTCTCTGGCCTGCCTGATTGGCCAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: SHEVCLKDRALR*CSLACLIGQKE
Trigger: CTCCTTCTGGCCAATCAGGCAGGCCAGAGAACAGCAGCGGAGGGCCCTGTCTTTCAGGCAGACCTCATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS CCA 72 bp CAAAGGGGAGACTTGCCCAGGGTGCCCGTGAGAGAATaGTTCCAGCTGGCTGCCTCTGATACAGAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: QRGDLPRVPVRE*FQLAASDTEGR
Trigger: TCTGCCCTCTGTATCAGAGGCAGCCAGCTGGAACCATTCTCTCACGGGCACCCTGGGCAAGTCTCCCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491584.1
CDS CAA 90 bp CAGACACGGCTCTGGGGATTTGGCAAGATGGTCTTGTATCGGTCCTaGGAGGCGTGGCCAGGGATGTCCAGGTCTTCGGGGCTGACAAAG +
Preference number: 6 (lower is better)
Translates to: QTRLWGFGKMVLYRS*EAWPGMSRSSGLTK
Trigger: CTTTGTCAGCCCCGAAGACCTGGACATCCCTGGCCACGCCTCCAAGGACCGATACAAGACCATCTTGCCAAATCCCCAGAGCCGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000435759.6
ENST00000464870.5
ENST00000467283.5
ENST00000476061.5
ENST00000477554.5
ENST00000477625.5
ENST00000479092.5
ENST00000480836.5
ENST00000486116.5
ENST00000492977.5
ENST00000495688.5
ENST00000496197.5
CDS TCA 72 bp TGGAGGCGTGGCCAGGGATGTCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCTTCTCTCCTGCAGTCG +
Preference number: 6 (lower is better)
Translates to: WRRGQGCPGLRG*QSLKGSSLLQS
Trigger: CGACTGCAGGAGAGAAGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGGACATCCCTGGCCACGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479092.5
ENST00000480836.5
CDS GCA 72 bp ATTGGCCAGAAGGAGGCTCCCATGCCAGGCCAGGTTTaGACTCTGTTTTCACTGGGGCGTCTTCTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: IGQKEAPMPGQV*TLFSLGRLLFP
Trigger: GGGGAACAGAAGACGCCCCAGTGAAAACAGAGTGCAAACCTGGCCTGGCATGGGAGCCTCCTTCTGGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS CAA 72 bp AGACAGACACGGCTCTGGGGATTTGGCAAGATGGTCTaGTATCGGTCCTTGGAGGCGTGGCCAGGGATGTCC +
Preference number: 6 (lower is better)
Translates to: RQTRLWGFGKMV*YRSLEAWPGMS
Trigger: GGACATCCCTGGCCACGCCTCCAAGGACCGATACAAGACCATCTTGCCAAATCCCCAGAGCCGTGTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000435759.6
ENST00000464870.5
ENST00000467283.5
ENST00000476061.5
ENST00000477554.5
ENST00000477625.5
ENST00000479092.5
ENST00000480836.5
ENST00000486116.5
ENST00000492977.5
ENST00000495688.5
ENST00000496197.5
CDS CAA 72 bp GATTGGCCAGAAGGAGGCTCCCATGCCAGGCCAGGTTaGCACTCTGTTTTCACTGGGGCGTCTTCTGTTCCC +
Preference number: 6 (lower is better)
Translates to: DWPEGGSHARPG*HSVFTGASSVP
Trigger: GGGAACAGAAGACGCCCCAGTGAAAACAGAGTGCAAACCTGGCCTGGCATGGGAGCCTCCTTCTGGCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS CAA 72 bp CAGCCCTCTCCCTTTGTCAGCCAGAACAGGGCAGCCTaGAACTCAACTGCTCCTTCCAGCTGCCTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: QPSPFVSQNRAA*NSTAPSSCLPL
Trigger: AAGAGGCAGGCAGCTGGAAGGAGCAGTTGAGTTCAAGGCTGCCCTGTTCTGGCTGACAAAGGGAGAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468385.1
CDS TCA 72 bp TGGAGGCGTGGCCAGGGATGTCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCTTTGAAGCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: WRRGQGCPGLRG*QSLKGSLKQLW
Trigger: CCACAGCTGCTTCAAAGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGGACATCCCTGGCCACGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477625.5
CDS CCA 72 bp TTTGGCAAGATGGTCTTGTATCGGTCCTTGGAGGCGTaGCCAGGGATGTCCAGGTCTTCGGGGCTGACAAAG +
Preference number: 6 (lower is better)
Translates to: FGKMVLYRSLEA*PGMSRSSGLTK
Trigger: CTTTGTCAGCCCCGAAGACCTGGACATCCCTGGCCACGCCTCCAAGGACCGATACAAGACCATCTTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000309017.7
ENST00000367279.8
ENST00000435759.6
ENST00000464870.5
ENST00000467283.5
ENST00000476061.5
ENST00000477554.5
ENST00000477625.5
ENST00000479092.5
ENST00000480836.5
ENST00000486116.5
ENST00000492977.5
ENST00000495688.5
ENST00000496197.5
CDS CCA 72 bp CTCCCATGCCAGGCCAGGTTTGCACTCTGTTTTCACTaGGGCGTCTTCTGTTCCCCAAGAGGTGGCCTCATT +
Preference number: 6 (lower is better)
Translates to: LPCQARFALCFH*GVFCSPRGGLI
Trigger: AATGAGGCCACCTCTTGGGGAACAGAAGACGCCCCAGTGAAAACAGAGTGCAAACCTGGCCTGGCATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367279.8
CDS CAA 90 bp TCTCCCTCAAGGCCCTCTCCCTCAAAGCCCTTGCTGCTTCAAGCCTaGGGAATTCATGGCCAAGCACAGACCACATCTTCCCAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: SPSRPSPSKPLLLQA*GIHGQAQTTSSQSR
Trigger: TCTGCTCTGGGAAGATGTGGTCTGTGCTTGGCCATGAATTCCCAAGGCTTGAAGCAGCAAGGGCTTTGAGGGAGAGGGCCTTGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS CAA 72 bp AGGCCCTCTCCCTCAAAGCCCTTGCTGCTTCAAGCCTaGGGAATTCATGGCCAAGCACAGACCACATCTTCC +
Preference number: 6 (lower is better)
Translates to: RPSPSKPLLLQA*GIHGQAQTTSS
Trigger: GGAAGATGTGGTCTGTGCTTGGCCATGAATTCCCAAGGCTTGAAGCAGCAAGGGCTTTGAGGGAGAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS TCA 72 bp CACTACTGGTTTCCTTTCCAAATTGGAGTCAACAACTaGGGGCCCTCTGGACCCTGCTGTCAGAGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: HYWFPFQIGVNN*GPSGPCCQSWR
Trigger: CCTCCAGCTCTGACAGCAGGGTCCAGAGGGCCCTCAGTTGTTGACTCCAATTTGGAAAGGAAACCAGTAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468385.1
CDS CCA 72 bp TGTTTACACCCACAGACCCACCTGTCTAGCCGCAGTTaGCACACAATACCCAGAATGTCCACTTCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: CLHPQTHLSSRS*HTIPRMSTSPR
Trigger: CCGAGGAGAAGTGGACATTCTGGGTATTGTGTGCCAACTGCGGCTAGACAGGTGGGTCTGTGGGTGTAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS CAA 72 bp CACAAAGAACCCAAGGCTCTCCTGCTCAACCTGACCTaGGCCGGAGGCTTATTTCTCCTTCTCTGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: HKEPKALLLNLT*AGGLFLLLCFC
Trigger: GCAGAAGCAGAGAAGGAGAAATAAGCCTCCGGCCAAGGTCAGGTTGAGCAGGAGAGCCTTGGGTTCTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309017.7
CDS TCA 72 bp TGGAGGCGTGGCCAGGGATGTCCAGGTCTTCGGGGCTaGCAAAGTTTGAAGGGATCAAGAATTCTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: WRRGQGCPGLRG*QSLKGSRILLP
Trigger: TGGAAGAAGAATTCTTGATCCCTTCAAACTTTGTCAGCCCCGAAGACCTGGACATCCCTGGCCACGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467283.5
CDS GCA 72 bp CACATTGGAGCCCCGCCTGCAGGCATAGCCCACCACTaGCTAGTGAGCACCCAATCATATTTGCTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: HIGAPPAGIAHH*LVSTQSYLLFF
Trigger: AAAGAAAAGCAAATATGATTGGGTGCTCACTAGGCAGTGGTGGGCTATGCCTGCAGGCGGGGCTCCAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS CAA 72 bp AAGCAGAAAGGGTTTCTTCCTTTCTTGCAGGAGTGCTaGATGGTGATGGGCCTAGCAGAACTCTGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: KQKGFLPFLQEC*MVMGLAELWGP
Trigger: TGGGCCCCAGAGTTCTGCTAGGCCCATCACCATCAAGCACTCCTGCAAGAAAGGAAGAAACCCTTTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS TCA 72 bp GGGCCTTGCCTGGAATTTAGGGAGCAGGCTCATGGTTaGTATGAAACTCTGTGCTCCAGACATGCAAAAGAC +
Preference number: 6 (lower is better)
Translates to: GPCLEFREQAHG*YETLCSRHAKD
Trigger: GTCTTTTGCATGTCTGGAGCACAGAGTTTCATATCAACCATGAGCCTGCTCCCTAAATTCCAGGCAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468385.1
CDS CAA 90 bp AGTTGTAAAATAAACAGCTCTAAGCAGAAAGGGTTTCTTCCTTTCTaGCAGGAGTGCTTGATGGTGATGGGCCTAGCAGAACTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: SCKINSSKQKGFLPF*QECLMVMGLAELWG
Trigger: GCCCCAGAGTTCTGCTAGGCCCATCACCATCAAGCACTCCTGCAAGAAAGGAAGAAACCCTTTCTGCTTAGAGCTGTTTATTTTACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492977.5
CDS CAA 72 bp ATAAACAGCTCTAAGCAGAAAGGGTTTCTTCCTTTCTaGCAGGAGTGCTTGATGGTGATGGGCCTAGCAGAA +
Preference number: 6 (lower is better)
Translates to: INSSKQKGFLPF*QECLMVMGLAE
Trigger: TTCTGCTAGGCCCATCACCATCAAGCACTCCTGCAAGAAAGGAAGAAACCCTTTCTGCTTAGAGCTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492977.5