RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000110786

Ensembl transcript IDs: ENST00000358540.7, ENST00000396166.7, ENST00000396168.1, ENST00000396170.5, ENST00000477854.5, ENST00000496201.2

Found 614 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGTACAGAGGGCAGAGATGGATGGACA +
Preference number: 1 (lower is better)
Translates to: QVRLLRGWSSLPLPG*GDTVSGTEGRDGWT
Trigger: TGTCCATCCATCTCTGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR TCA 90 bp GGCTCCAAGATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTaGTGGGCTCTCAACACACGCATGGACATGGGAACACACGCAGAG +
Preference number: 1 (lower is better)
Translates to: GSKIIHVAKESCMPS*WALNTRMDMGTHAE
Trigger: CTCTGCGTGTGTTCCCATGTCCATGCGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATCTTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR GCA 90 bp TTTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAATACATGTTaGCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACG +
Preference number: 1 (lower is better)
Translates to: FKVSNKNTWLQDNTC*QRVMHALLMGSQHT
Trigger: CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCCCGAGGCAGGGCCCTaGGTGAGGGCCGAGACTCAG +
Preference number: 2 (lower is better)
Translates to: LWVLHAPSAPYLASASQAPEAGP*VRAETQ
Trigger: CTGAGTCTCGGCCCTCACCCAGGGCCCTGCCTCGGG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGCCCGGGGTCTGCGTaGTGTGGGTCAGGCCCCGGG +
Preference number: 2 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQSPGSA*CGSGPG
Trigger: CCCGGGGCCTGACCCACACCACGCAGACCCCGGGCT...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCCCGAGGCAGGGCCCTaGGTGAGGGCCGAGACTCAG +
Preference number: 2 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQPEAGP*VRAETQ
Trigger: CTGAGTCTCGGCCCTCACCCAGGGCCCTGCCTCGGG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCGTCCCTTCCCGACCCTaGCCCCCACTCCCCAATATG +
Preference number: 2 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSVPSRP*PPLPNM
Trigger: CATATTGGGGAGTGGGGGGCAGGGTCGGGAAGGGAC...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCCTCCTGAGAGCATCTaGCACCCAGAGGCCACCCTG +
Preference number: 2 (lower is better)
Translates to: LWVLHAPSAPYLASASQAPPESI*HPEATL
Trigger: CAGGGTGGCCTCTGGGTGTCAGATGCTCTCAGGAGG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTGTCCCTTCCCGACCCTaGCCCCCACTCCCCAATATG +
Preference number: 2 (lower is better)
Translates to: LWVLHAPSAPYLASASQAVPSRP*PPLPNM
Trigger: CATATTGGGGAGTGGGGGGCAGGGTCGGGAAGGGAC...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCTTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGT +
Preference number: 2 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSLPLPG*GDTVSG
Trigger: ACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAA...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGTCCCTTCCCGACCCTaGCCCCCACTCCCCAATATG +
Preference number: 2 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQVPSRP*PPLPNM
Trigger: CATATTGGGGAGTGGGGGGCAGGGTCGGGAAGGGAC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTTTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGT +
Preference number: 2 (lower is better)
Translates to: LWVLHAPSAPYLASASQALPLPG*GDTVSG
Trigger: ACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAA...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTTTCTGGAGCTCCCCATaGCTAACTCCCCGTCATCTG +
Preference number: 2 (lower is better)
Translates to: LWVLHAPSAPYLASASQAFWSSP*LTPRHL
Trigger: CAGATGACGGGGAGTTAGGCATGGGGAGCTCCAGAA...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGCCCGAGGCAGGGCCCTaGGTGAGGGCCGAGACTCAG +
Preference number: 2 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARPEAGP*VRAETQ
Trigger: CTGAGTCTCGGCCCTCACCCAGGGCCCTGCCTCGGG...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTTCTCTGGTGACCTTCTaGAGCTCCCCATGCCTAACT +
Preference number: 2 (lower is better)
Translates to: LWVLHAPSAPYLASASQASLVTF*SSPCLT
Trigger: AGTTAGGCATGGGGAGCTCCAGAAGGTCACCAGAGA...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACCCGAGGCAGGGCCCTaGGTGAGGGCCGAGACTCAG +
Preference number: 2 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETPEAGP*VRAETQ
Trigger: CTGAGTCTCGGCCCTCACCCAGGGCCCTGCCTCGGG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAACCATCGTTAAAAACTaGAGCCCGGGGTCTGCGTGG +
Preference number: 2 (lower is better)
Translates to: GAHYPFLAEETQCPVQRATIVKN*SPGSAW
Trigger: CCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCGCAGGCAAGTCCGGTTaGTTAGGGGCTGGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: AHSNLENSPSAESSLVTFAGKSG*LGAGAH
Trigger: ATGAGCTCCAGCCCCTAAGCAACCGGACTTGCCTGC...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCCCCTACCTTGCCAGTaGCTCACAGGCTGGGCACCC +
Preference number: 2 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEPLPCQ*LTGWAP
Trigger: GGGTGCCCAGCCTGTGAGGCACTGGCAAGGTAGGGG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAACCATCGTTAAAAACTaGAGCCCGGGGTCTGCGTGG +
Preference number: 2 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETTIVKN*SPGSAW
Trigger: CCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTGGGAGAAGTGCGGGTaGGGCCGAGGCAGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHWEKCG*GRGRQV
Trigger: GACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGGCTGGGCACCCTCCTaGGAGCATCTGACACCCAGA +
Preference number: 2 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLGWAPS*EHLTPR
Trigger: TCTGGGTGTCAGATGCTCTCAGGAGGGTGCCCAGCC...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGGGCTGGGCACCCTCCTaGGAGCATCTGACACCCAGA +
Preference number: 2 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEGWAPS*EHLTPR
Trigger: TCTGGGTGTCAGATGCTCTCAGGAGGGTGCCCAGCC...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGTCCCTTCCCGACCCTaGCCCCCACTCCCCAATATG +
Preference number: 2 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLVPSRP*PPLPNM
Trigger: CATATTGGGGAGTGGGGGGCAGGGTCGGGAAGGGAC...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCACAGACAGAACACATTaGAGCAGGACACAAAGTGTA +
Preference number: 2 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSTDRTH*SRTQSV
Trigger: TACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGT...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAGTCCCTTCCCGACCCTaGCCCCCACTCCCCAATATG +
Preference number: 2 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETVPSRP*PPLPNM
Trigger: CATATTGGGGAGTGGGGGGCAGGGTCGGGAAGGGAC...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGATCTGCCCCCTACCTTaGCAGTGCCTCACAGGCTGG +
Preference number: 2 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTICPLP*QCLTGW
Trigger: CCAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGAT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTATCTGCCCCCTACCTTaGCAGTGCCTCACAGGCTGG +
Preference number: 2 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLICPLP*QCLTGW
Trigger: CCAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGAT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTTCTCCATGCCCCATCTaGCCCCTACCTTGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLSPCPI*PLPCQC
Trigger: GCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGA...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCCTCTGGGTTCTCCATaGCCCATCTGCCCCCTACCT +
Preference number: 2 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLPLGSP*PICPLP
Trigger: AGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAGG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCCTCTGGGTTCTCCATaGCCCATCTGCCCCCTACCT +
Preference number: 2 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEPLGSP*PICPLP
Trigger: AGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAGG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGTTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGT +
Preference number: 2 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLELPLPG*GDTVSG
Trigger: ACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAA...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTTTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGT +
Preference number: 2 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLLPLPG*GDTVSG
Trigger: ACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAA...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGACAGACAGAACACATTaGAGCAGGACACAAAGTGTA +
Preference number: 2 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQTDRTH*SRTQSV
Trigger: TACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGT...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGGCAGGCAAGTCCGGTTaGTTAGGGGCTGGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEAGKSG*LGAGAH
Trigger: ATGAGCTCCAGCCCCTAAGCAACCGGACTTGCCTGC...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACATCTGCCCCCTACCTTaGCAGTGCCTCACAGGCTGG +
Preference number: 2 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHICPLP*QCLTGW
Trigger: CCAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGAT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCTGAAAGCTCTCTGGTaGCCTTCTGGAGCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTLKALW*PSGAPH
Trigger: ATGGGGAGCTCCAGAAGGTCACCAGAGAGCTTTCAG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAACAGACAGAACACATTaGAGCAGGACACAAAGTGTA +
Preference number: 2 (lower is better)
Translates to: GAHYPFLAEETQCPVQRATDRTH*SRTQSV
Trigger: TACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGTTCTGGAGCTCCCCATaGCTAACTCCCCGTCATCTG +
Preference number: 2 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEFWSSP*LTPRHL
Trigger: CAGATGACGGGGAGTTAGGCATGGGGAGCTCCAGAA...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGACCATCGTTAAAAACTaGAGCCCGGGGTCTGCGTGG +
Preference number: 2 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARTIVKN*SPGSAW
Trigger: CCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCGGTTGCTTAGGGGCTaGAGCTCATTACCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLERLLRG*SSLPLP
Trigger: AGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCTGAAAGCTCTCTGGTaGCCTTCTGGAGCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHLKALW*PSGAPH
Trigger: ATGGGGAGCTCCAGAAGGTCACCAGAGAGCTTTCAG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAACCATCGTTAAAAACTaGAGCCCGGGGTCTGCGTGG +
Preference number: 2 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETTIVKN*SPGSAW
Trigger: CCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGTCTCTGGTGACCTTCTaGAGCTCCCCATGCCTAACT +
Preference number: 2 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTSLVTF*SSPCLT
Trigger: AGTTAGGCATGGGGAGCTCCAGAAGGTCACCAGAGA...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCAGAGCAACACGCAGTaGGACTTCTGGGAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHQSNTQ*DFWEGF
Trigger: AAAGCCTTCCCAGAAGTCTCACTGCGTGTTGCTCTG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR GCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCACAGACAGAACACATTaGAGCAGGACACAAAGTGTA +
Preference number: 2 (lower is better)
Translates to: AHSNLENSPSAESSLVTFTDRTH*SRTQSV
Trigger: TACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGT...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTCTCTGGTGACCTTCTaGAGCTCCCCATGCCTAACT +
Preference number: 2 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHSLVTF*SSPCLT
Trigger: AGTTAGGCATGGGGAGCTCCAGAAGGTCACCAGAGA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACAAGGCTTTCCCACAGTaGCACAGAAAAATGTCTCAC +
Preference number: 2 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHKAFPQ*HRKMSH
Trigger: GTGAGACATTTTTCTGTGTCACTGTGGGAAAGCCTT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR GCA 72 bp CAGGGCCTAGATCCTCTGGGTTCTCCATGCCCCATCTaGCCCCTACCTTGCCAGTGCCTCACAGGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: QGLDPLGSPCPI*PLPCQCLTGWA
Trigger: TGCCCAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAGGATCTAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR GCA 72 bp AGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCGGTTaGTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: RSAGEAEAGKSG*LGAGAHYPFLA
Trigger: AGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTTGCCTGCCTCGGCCTCACCCGCACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR GCA 72 bp CCTCCCCAACAGGGCCTAGATCCTCTGGGTTCTCCATaGCCCATCTGCCCCCTACCTTGCCAGTGCCTCACA +
Preference number: 3 (lower is better)
Translates to: PPQQGLDPLGSP*PICPLPCQCLT
Trigger: TGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAGGATCTAGGCCCTGTTGGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR TCA 72 bp TTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGTACAGAGGGCAGAGAT +
Preference number: 3 (lower is better)
Translates to: LLRGWSSLPLPG*GDTVSGTEGRD
Trigger: ATCTCTGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR CCA 72 bp TCTGGATCAGGTATTGATGGAACCATCGTTAAAAACTaGAGCCCGGGGTCTGCGTGGTGTGGGTCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: SGSGIDGTIVKN*SPGSAWCGSGP
Trigger: GGGGCCTGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CAA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCCCGTCATCTGCCTTTaGGGAGAAGTGCGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTPVICL*GEVRVR
Trigger: CCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CAA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCCGTCATCTGCCTTTaGGGAGAAGTGCGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPVICL*GEVRVR
Trigger: CCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CAA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTATTCTGGATCAGGTATaGATGGAACCATCGTTAAAA +
Preference number: 3 (lower is better)
Translates to: LWVLHAPSAPYLASASQAILDQV*MEPSLK
Trigger: TTTTAACGATGGTTCCATCAATACCTGATCCAGAAT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CAA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAATTCTGGATCAGGTATaGATGGAACCATCGTTAAAA +
Preference number: 3 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAILDQV*MEPSLK
Trigger: TTTTAACGATGGTTCCATCAATACCTGATCCAGAAT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR TCA 72 bp ATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTaGTGGGCTCTCAACACACGCATGGACATGGGAACA +
Preference number: 3 (lower is better)
Translates to: IIHVAKESCMPS*WALNTRMDMGT
Trigger: TGTTCCCATGTCCATGCGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR GCA 72 bp AGCAATAAAAACACGTGGCTCCAAGATAATACATGTTaGCAAAGAGTCATGCATGCCCTCCTGATGGGCTCT +
Preference number: 3 (lower is better)
Translates to: SNKNTWLQDNTC*QRVMHALLMGS
Trigger: AGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATCTTGGAGCCACGTGTTTTTATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
3UTR-3UTR CAA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTATTCTGGATCAGGTATaGATGGAACCATCGTTAAAA +
Preference number: 3 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLILDQV*MEPSLK
Trigger: TTTTAACGATGGTTCCATCAATACCTGATCCAGAAT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTAGCCCGGGGTCTGCGTaGTGTGGGTCAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQASPGSA*CGSGPG
Trigger: CCCGGGGCCTGACCCACACCACGCAGACCCCGGGCT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGGACACGGGAGGCGCTaGGCAGGTACTCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQGHGRR*AGTRGR
Trigger: CCGCCCGCGAGTACCTGCTCAGCGCCTCCCGTGTCC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCCACAGGGGAGCAGGCTaGGTATGGAGCCGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSHRGAG*VWSRPP
Trigger: AGGGGGCCGGCTCCATACTCAGCCTGCTCCCCTGTG...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477854.5
CDS-3UTR CCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCTGGCGGCTCACTGACTaGCGCCTGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSWRLTD*RLSSGG
Trigger: GCCCCCTGAGGACAGGCGCCAGTCAGTGAGCCGCCA...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCGCGTCCGTCCTTCGGTaGCTCCGTCCTTCGGTCCGT +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSASVLR*LRPSVR
Trigger: ACGGACCGAAGGACGGAGGCACCGAAGGACGGACGC...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCCCCCTACCTTGCCAGTaGCTCACAGGCTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSPLPCQ*LTGWAP
Trigger: GGGTGCCCAGCCTGTGAGGCACTGGCAAGGTAGGGG...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCGGACTTGACGGTGAGTaGGGTGGGGTCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSGLDGE*GGVSLR
Trigger: CCTGAGGCTGACCCCACCTCACTCACCGTCAAGTCC...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTAGTCGGCGACCGTGCTaGCGATGGGTCCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQASRRPC*RWVPEW
Trigger: CCACTCAGGGACCCATCGTCAGCACGGTCGCCGACT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCACTTGCCCTCCTGACGTaGGGCGCGGGGCACGCACCT +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRALALLT*GAGHAP
Trigger: AGGTGCGTGCCCCGCGCCGCACGTCAGGAGGGCAAG...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCTCCTGCCGCAGCTGCTaGCAGCAGATGCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSSCRSC*QQMLVA
Trigger: TGCCACCAGCATCTGCTGCCAGCAGCTGCGGCAGGA...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCTGTGGCCATAACCGCTaGACCAGAGCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSCGHNR*TRAPHR
Trigger: CCTGTGGGGTGCTCTGGTTCAGCGGTTATGGCCACA...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTGGACTTGACGGTGAGTaGGGTGGGGTCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAGLDGE*GGVSLR
Trigger: CCTGAGGCTGACCCCACCTCACTCACCGTCAAGTCC...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCACTGCAGTGGACGATaGTGGGGGCACAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQHCSGR*WGHSGA
Trigger: GGCCCCACTGTGCCCCCATCATCGTCCACTGCAGTG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAATGCCGCCCCTGTCCTaGCGGAGCTGGCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAMPPLS*RSWHVV
Trigger: GACCACGTGCCAGCTCCGTCAGGACAGGGGCGGCAT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTATGCGCGCGCGAGTGTaGGTGTGTCTGCGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAMRARV*VCLRVS
Trigger: GGACACACGCAGACACACGCACACTCGCGCGCGCAT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCATGGGCGTGTGCTCCTaGCACACCATGCGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSMGVCS*HTMRQK
Trigger: CTTCTGGCGCATGGTGTGGCAGGAGCACACGCCCAT...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCCGCATGTCTGGATCATaGCGCCCCTGTCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSRMSGS*RPCPDG
Trigger: TCCGTCAGGACAGGGGCGGCATGATCCAGACATGCG...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCTCTCCATGCCCCATCTaGCCCCTACCTTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSSPCPI*PLPCQC
Trigger: GCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGA...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCCCTCTGGGTTCTCCATaGCCCATCTGCCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSPLGSP*PICPLP
Trigger: AGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAGG...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGGCTCATTGGGGGCATaGCGTGGCGCTCCCCGCATG +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAGSLGA*RGAPRM
Trigger: CATGCGGGGAGCGCCACGGCATGCCCCCAATGAGCC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCTTCGCCTCTTGCTGTaGCTCGCCTGCGCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQLRLLL*LACACV
Trigger: CACGCAGGCGCAGGCGAGGCACAGCAAGAGGCGAAG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCCCAGCGCCTCGAGGTaGTGGCTTCTGAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAPSASR*WLLSWI
Trigger: GATCCAGCTCAGAAGCCACCACCTCGAGGCGCTGGG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGATGATGGGGGCACAGTaGGGCCCCTCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQMMGAQ*GPSCWA
Trigger: AGCCCAGCAGGAGGGGCCCCACTGTGCCCCCATCAT...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGCTGCAGAGTCGCTaGCGCAGCCGCCGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETQLQSR*RSRRVG
Trigger: ACCCACCCGGCGGCTGCGCCAGCGACTCTGCAGCTG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR TCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCACGAGGTGGTGGCTTCTaGGCTGGATCTGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRARGGGF*AGSEGG
Trigger: GCCGCCCTCAGATCCAGCTCAGAAGCCACCACCTCG...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTTGTGGCCATAACCGCTaGACCAGAGCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQACGHNR*TRAPHR
Trigger: CCTGTGGGGTGCTCTGGTTCAGCGGTTATGGCCACA...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCGGGCTGGCGGCTCACTaGCTGGCGCCTGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFGLAAH*LAPVLR
Trigger: CCTGAGGACAGGCGCCAGTCAGTGAGCCGCCAGCCC...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCCTCCTCCATCCACTCTaGGTAGGTGAAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSLLHPL*VGEGGL
Trigger: CAGCCCTCCTTCACCTACTCAGAGTGGATGGAGGAG...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCAGATGCTGGTGGCAATaGAGCAGCCGGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSRCWWQ*SSRSSQ
Trigger: TTGGGAGGACCGGCTGCTTCATTGCCACCAGCATCT...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGGCTGGGCACCCTCCTaGGAGCATCTGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQGWAPS*EHLTPR
Trigger: TCTGGGTGTCAGATGCTCTCAGGAGGGTGCCCAGCC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCAGGGCCGTGCGCGCTaGACCTGGGACGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFQGRAR*TWDGTD
Trigger: GTCTGTCCCGTCCCAGGTTCAGCGCGCACGGCCCTG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCCTGGATGGGGAAGGGTaGCATCTTCCAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSLDGEG*HLPGQE
Trigger: TTCCTGCCCTGGAAGATGGCACCCTTCCCCATCCAG...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCCAAAGCCCTCCTCGTTaGAGCCCGGAGTGCACATGT +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSQSPPR*SPECTC
Trigger: ACATGTGCACTCCGGGCTGCAACGAGGAGGGCTTTG...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCCGTCGTACGCCACCTaGTCCTCCGGCCAATACTCG +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQPSYAT*SSGQYS
Trigger: CGAGTATTGGCCGGAGGAGCAGGTGGCGTACGACGG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCACCCTCCACTGAGTCTTaGCCTCCTGACGTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAPSTES*PPDVRR
Trigger: GCGCCGCACGTCAGGAGGGCAAGACTCAGTGGAGGG...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCATGTTGCCAACACCTaGGCAAGTGGAGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAHVANT*ASGAAP
Trigger: TGGGGCCGCTCCACTTGCGCAGGTGTTGGCAACATG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCCCCCATGCCAAGGTTaGTTGGACAAGGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAPPCQG*LDKEGG
Trigger: TCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATTGCTGTGCCTCGCCTaGGCCTGCGTGACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRALLCLA*ACVTRL
Trigger: GAGGCGAGTCACGCAGGCGCAGGCGAGGCACAGCAA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCGGTCTGGGGTCTTCTaGTCGGGCCAGGATGTGAAC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQARSGVF*SGQDVN
Trigger: GTTCACATCCTGGCCCGACCAGAAGACCCCAGACCG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAATGATGGGGGCACAGTaGGGCCCCTCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAMMGAQ*GPSCWA
Trigger: AGCCCAGCAGGAGGGGCCCCACTGTGCCCCCATCAT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCTACTGCTCGCATGTCTaGATCATGCCGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSYCSHV*IMPPLS
Trigger: GGACAGGGGCGGCATGATCCAGACATGCGAGCAGTA...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGGCATTCCATCCCCATaGGGGCTTGAGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQGIPSP*GLEAVG
Trigger: GCCCACAGCCTCAAGCCCCCATGGGGATGGAATGCC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAAGGGAGTCGGCTCATTaGGGGCATGCCGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRARESAH*GHAVAL
Trigger: GAGCGCCACGGCATGCCCCCAATGAGCCGACTCCCT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCGGCATCTCTCTCTGTaGGTCCTGGAGCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQRHLSL*VLEPFS
Trigger: GCTGAAGGGCTCCAGGACTCACAGAGAGAGATGCCG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGTCCACTCTGAGTAGGTaGAGGAGGGCTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQSTLSR*RRAGGS
Trigger: TGAGCCGCCAGCCCTCCTTCACCTACTCAGAGTGGA...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTGGTCGGGCCAGGATGTaGACCAGTAATGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAGRARM*TSNASG
Trigger: GCCTGAAGCATTACTGGTTCACATCCTGGCCCGACC...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACACTGCAGTGGACGATaGTGGGGGCACAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETHCSGR*WGHSGA
Trigger: GGCCCCACTGTGCCCCCATCATCGTCCACTGCAGTG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTAGATGCTGGTGGCAATaGAGCAGCCGGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQARCWWQ*SSRSSQ
Trigger: TTGGGAGGACCGGCTGCTTCATTGCCACCAGCATCT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCATGCCGCCCCTGTCCTaGCGGAGCTGGCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFMPPLS*RSWHVV
Trigger: GACCACGTGCCAGCTCCGTCAGGACAGGGGCGGCAT...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTTCATGCATGCCCTCCTaGTGGGCTCTCAACACACGC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQASCMPS*WALNTR
Trigger: GCGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGA...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCCCTGCTTGTGTCTGTaGCAGTGTGTATGCGACGGG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAPCLCL*QCVCDG
Trigger: CCCGTCGCATACACACTGGCACAGACACAAGCAGGG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTACAATGATGGGCGTGTaGTCCTGCCACACCATGCGC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQATMMGV*SCHTMR
Trigger: GCGCATGGTGTGGCAGGAGCACACGCCCATCATTGT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCGGTCCTCCCAATCCCTaGACTGCAGTGGACGATGAT +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSGPPNP*TAVDDD
Trigger: ATCATCGTCCACTGCAGTGCAGGGATTGGGAGGACC...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTGCAGGCAAGTCCGGTTaGTTAGGGGCTGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAAGKSG*LGAGAH
Trigger: ATGAGCTCCAGCCCCTAAGCAACCGGACTTGCCTGC...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGATCTGCCCCCTACCTTaGCAGTGCCTCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQICPLP*QCLTGW
Trigger: CCAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGAT...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCACCAGCAGAGCTCACCTaGAGCCTCAACCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAPAELT*SLNLAL
Trigger: CAGGGCCAGGTTGAGGCTGCAGGTGAGCTCTGCTGG...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCTGGCGGCTCACTGACTaGCGCCTGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFWRLTD*RLSSGG
Trigger: GCCCCCTGAGGACAGGCGCCAGTCAGTGAGCCGCCA...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCGGCGGACTCCTCACGTaGGGACATGAGATAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSGGLLT*GHEIAK
Trigger: TTTGGCTATCTCATGTCCCCACGTGAGGAGTCCGCC...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCGGTCTGGGGTCTTCTaGTCGGGCCAGGATGTGAAC +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQRSGVF*SGQDVN
Trigger: GTTCACATCCTGGCCCGACCAGAAGACCCCAGACCG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAATGATGGGGGCACAGTaGGGCCCCTCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETMMGAQ*GPSCWA
Trigger: AGCCCAGCAGGAGGGGCCCCACTGTGCCCCCATCAT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTGAAGCGCAGTCATTCTaGGGACTGGTGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAEAQSF*GLVGQL
Trigger: CAGCTGTCCCACCAGTCCCCAGAATGACTGCGCTTC...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCCCGAGGCAGGGCCCTaGGTGAGGGCCGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGPEAGP*VRAETQ
Trigger: CTGAGTCTCGGCCCTCACCCAGGGCCCTGCCTCGGG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCCGGTTGCTTAGGGGCTaGAGCTCATTACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSRLLRG*SSLPLP
Trigger: AGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCG...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAATTGGGGGCATGCCGTaGCGCTCCCCGCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETIGGMP*RSPHVA
Trigger: GGCAACATGCGGGGAGCGCCACGGCATGCCCCCAAT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCGACCCAAAGCCAGCTTaGTTTTGGGGGTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSDPKPA*FWGLVS
Trigger: GCTGACCAACCCCCAAAACCAAGCTGGCTTTGGGTC...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCTTCTGAGCTGGATCTaGGGGCGGCGAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFLLSWI*GRRGRR
Trigger: CCTCCTCCCTCGCCGCCCTCAGATCCAGCTCAGAAG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR TCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATCCACTCTGAGTAGGTaGAGGAGGGCTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRASTLSR*RRAGGS
Trigger: TGAGCCGCCAGCCCTCCTTCACCTACTCAGAGTGGA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCCTCACGTGGGGACATaGGATAGCCAAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQPHVGT*DSQSPP
Trigger: AGGAGGGCTTTGGCTATCTCATGTCCCCACGTGAGG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGGGACACGGGAGGCGCTaGGCAGGTACTCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEGHGRR*AGTRGR
Trigger: CCGCCCGCGAGTACCTGCTCAGCGCCTCCCGTGTCC...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGGACACGGGAGGCGCTaGGCAGGTACTCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARGHGRR*AGTRGR
Trigger: CCGCCCGCGAGTACCTGCTCAGCGCCTCCCGTGTCC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGATGCTGGTGGCAATaGAGCAGCCGGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQRCWWQ*SSRSSQ
Trigger: TTGGGAGGACCGGCTGCTTCATTGCCACCAGCATCT...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACCTCCTGAGAGCATCTaGCACCCAGAGGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETPPESI*HPEATL
Trigger: CAGGGTGGCCTCTGGGTGTCAGATGCTCTCAGGAGG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGGCTGGGCACCCTCCTaGGAGCATCTGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETGWAPS*EHLTPR
Trigger: TCTGGGTGTCAGATGCTCTCAGGAGGGTGCCCAGCC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCACGTAGATCTGGGCTaGGTCCCCACCCAAACCTTG +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQHVDLG*VPTQTL
Trigger: CAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCTGCATGGAGGCTCCTaGACCTCTAAGGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQLHGGS*TSKVQT
Trigger: GGTCTGGACCTTAGAGGTTCAGGAGCCTCCATGCAG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACCGGTAGCCTCTCACTaGAGCACATGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETPVASH*STCPGP
Trigger: GGGCCCTGGACATGTGCTGCAGTGAGAGGCTACCGG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCAAAGCCCTCCTCGTTaGAGCCCGGAGTGCACATGT +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQQSPPR*SPECTC
Trigger: ACATGTGCACTCCGGGCTGCAACGAGGAGGGCTTTG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCTCAAAGAATTCCGCCTaGAGCAGGAAAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSSKNSA*SRKGSR
Trigger: CCTGGACCCTTTCCTGCTGCAGGCGGAATTCTTTGA...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGACAATGATGGGCGTGTaGTCCTGCCACACCATGCGC +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQTMMGV*SCHTMR
Trigger: GCGCATGGTGTGGCAGGAGCACACGCCCATCATTGT...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACCGTCGTACGCCACCTaGTCCTCCGGCCAATACTCG +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETPSYAT*SSGQYS
Trigger: CGAGTATTGGCCGGAGGAGCAGGTGGCGTACGACGG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTGGTCCTCCCAATCCCTaGACTGCAGTGGACGATGAT +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAGPPNP*TAVDDD
Trigger: ATCATCGTCCACTGCAGTGCAGGGATTGGGAGGACC...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATCTCCATGCCCCATCTaGCCCCTACCTTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRASPCPI*PLPCQC
Trigger: GCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGGACGAGCAGGGAGCTaGCCATGTGCCCCACAATCC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETGRAGS*PCAPQS
Trigger: GGATTGTGGGGCACATGGGCAGCTCCCTGCTCGTCC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGACCCCGGCAGGGCCGTaGGCGCTGAACCTGGGACGG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLETPAGP*ALNLGR
Trigger: CCGTCCCAGGTTCAGCGCGCACGGCCCTGCCGGGGT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGACCGGGAGAGCGGCCTaGTCCCGGGGCACGAAGGGG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTTGRAA*SRGTKG
Trigger: CCCCTTCGTGCCCCGGGAGCAGGCCGCTCTCCCGGT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCCCAAGGTGTCTGGATaGGGAAGGGTGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQPKVSG*GRVPSS
Trigger: GGAAGATGGCACCCTTCCCCATCCAGACACCTTGGG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTTGGCGGCTCACTGACTaGCGCCTGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGWRLTD*RLSSGG
Trigger: GCCCCCTGAGGACAGGCGCCAGTCAGTGAGCCGCCA...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCATGATGGGGGCACAGTaGGGCCCCTCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFMMGAQ*GPSCWA
Trigger: AGCCCAGCAGGAGGGGCCCCACTGTGCCCCCATCAT...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAGCCCGGGGTCTGCGTaGTGTGGGTCAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARSPGSA*CGSGPG
Trigger: CCCGGGGCCTGACCCACACCACGCAGACCCCGGGCT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGAGCCCGGGGTCTGCGTaGTGTGGGTCAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLESPGSA*CGSGPG
Trigger: CCCGGGGCCTGACCCACACCACGCAGACCCCGGGCT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTACCATCGTTAAAAACTaGAGCCCGGGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQATIVKN*SPGSAW
Trigger: CCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCGGTTGCTTAGGGGCTaGAGCTCATTACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQARLLRG*SSLPLP
Trigger: AGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGCTGCTAGTGCGCTaGCCAGAGGTTTCCGGCATT +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQRLLVR*PEVSGI
Trigger: AATGCCGGAAACCTCTGGCCAGCGCACTAGCAGCCT...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGGGAATTGCGCAGGGCTaGCGGGGCGGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEGIAQG*RGGGPG
Trigger: TCCCGGTCCCCCGCCCCGCCAGCCCTGCGCAATTCC...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGGCCACATTGCCCAGTaGCACCAGACACAGACCCAA +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQGHIAQ*HQTQTQ
Trigger: TTGGGTCTGTGTCTGGTGCCACTGGGCAATGTGGCC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCTTCTGAGCTGGATCTaGGGGCGGCGAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGLLSWI*GRRGRR
Trigger: CCTCCTCCCTCGCCGCCCTCAGATCCAGCTCAGAAG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR TCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTGTTTGTGGCGTTCTGTaGCCAGATGTGGCCATAACC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAVCGVL*PDVAIT
Trigger: GGTTATGGCCACATCTGGTCACAGAACGCCACAAAC...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGGGGCTGGCGGCTCACTaGCTGGCGCCTGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEGLAAH*LAPVLR
Trigger: CCTGAGGACAGGCGCCAGTCAGTGAGCCGCCAGCCC...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAGGACACGGGAGGCGCTaGGCAGGTACTCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETGHGRR*AGTRGR
Trigger: CCGCCCGCGAGTACCTGCTCAGCGCCTCCCGTGTCC...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTAGTCGGCGACCGTGCTaGCGATGGGTCCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGSRRPC*RWVPEW
Trigger: CCACTCAGGGACCCATCGTCAGCACGGTCGCCGACT...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRALPLPG*GDTVSG
Trigger: ACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTTGGGAGAAGTGCGGGTaGGGCCGAGGCAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGWEKCG*GRGRQV
Trigger: GACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCA...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCCTCCTGAGAGCATCTaGCACCCAGAGGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFPPESI*HPEATL
Trigger: CAGGGTGGCCTCTGGGTGTCAGATGCTCTCAGGAGG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCAGGTCAGACACACTCTaGTGTGAGGGTTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSRSDTL*CEGWEV
Trigger: TACTTCCCAACCCTCACAGCAGAGTGTGTCTGACCT...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCCCTCCTGCCGCAGCTaGTGGCAGCAGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGPSCRS*WQQMLV
Trigger: CACCAGCATCTGCTGCCAGCAGCTGCGGCAGGAGGG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACGCATGTCTGGATCATaGCGCCCCTGTCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETRMSGS*RPCPDG
Trigger: TCCGTCAGGACAGGGGCGGCATGATCCAGACATGCG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGCAGGCAAGTCCGGTTaGTTAGGGGCTGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAAGKSG*LGAGAH
Trigger: ATGAGCTCCAGCCCCTAAGCAACCGGACTTGCCTGC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACCTCTGGGTTCTCCATaGCCCATCTGCCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETPLGSP*PICPLP
Trigger: AGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAGG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCGCGGCTACGGCAACTaGCAGAGGGACCCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLRGYGN*QRDPGR
Trigger: CCTGCCGGGGTCCCTCTGGCAGTTGCCGTAGCCGCG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCTCTCCCGAGCAACTCTaGGCGGAGTCTCCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFSPEQL*AESPQS
Trigger: CGACTGCGGAGACTCCGCGCAGAGTTGCTCGGGAGA...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTTCGGTCCGTCCGCCTaGCGCTCCGTCCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHFGPSA*RSVPRS
Trigger: GGAGCGCGGGACGGAGCGCCAGGCGGACGGACCGAA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS-3UTR CCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTTGGCGGCTCACTGACTaGCGCCTGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRWRLTD*RLSSGG
Trigger: GCCCCCTGAGGACAGGCGCCAGTCAGTGAGCCGCCA...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGGCGGACTCCTCACGTaGGGACATGAGATAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQGGLLT*GHEIAK
Trigger: TTTGGCTATCTCATGTCCCCACGTGAGGAGTCCGCC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACGGTCTGGGGTCTTCTaGTCGGGCCAGGATGTGAAC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETRSGVF*SGQDVN
Trigger: GTTCACATCCTGGCCCGACCAGAAGACCCCAGACCG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGACGGAGCTGGCACGTaGTCTTCAGGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRADGAGT*SSGCPP
Trigger: TGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATACTGCTCGCATGTCTaGATCATGCCGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAYCSHV*IMPPLS
Trigger: GGACAGGGGCGGCATGATCCAGACATGCGAGCAGTA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCCCGAGGCAGGGCCCTaGGTGAGGGCCGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLPEAGP*VRAETQ
Trigger: CTGAGTCTCGGCCCTCACCCAGGGCCCTGCCTCGGG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCCCGAGGCAGGGCCCTaGGTGAGGGCCGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTPEAGP*VRAETQ
Trigger: CTGAGTCTCGGCCCTCACCCAGGGCCCTGCCTCGGG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAAGCCCGGGGTCTGCGTaGTGTGGGTCAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETSPGSA*CGSGPG
Trigger: CCCGGGGCCTGACCCACACCACGCAGACCCCGGGCT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTACACACGCATGGACATaGGAACACACGCAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQATHAWT*EHTQSN
Trigger: GTTGCTCTGCGTGTGTTCCCATGTCCATGCGTGTGT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTTCAGCAGCGTTGGCATaGATCTTGCCTTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQASAALA*ILPLVL
Trigger: CAGGACCAAAGGCAAGATCCATGCCAACGCTGCTGA...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACGGGCTGGCGGCTCACTaGCTGGCGCCTGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHGLAAH*LAPVLR
Trigger: CCTGAGGACAGGCGCCAGTCAGTGAGCCGCCAGCCC...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCTCCACTCTGAGTAGGTaGAGGAGGGCTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFSTLSR*RRAGGS
Trigger: TGAGCCGCCAGCCCTCCTTCACCTACTCAGAGTGGA...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTGGACTTGACGGTGAGTaGGGTGGGGTCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGGLDGE*GGVSLR
Trigger: CCTGAGGCTGACCCCACCTCACTCACCGTCAAGTCC...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACCTCACGTGGGGACATaGGATAGCCAAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETPHVGT*DSQSPP
Trigger: AGGAGGGCTTTGGCTATCTCATGTCCCCACGTGAGG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGATGCCGCCCCTGTCCTaGCGGAGCTGGCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEMPPLS*RSWHVV
Trigger: GACCACGTGCCAGCTCCGTCAGGACAGGGGCGGCAT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTTGGGAGAAGTGCGGGTaGGGCCGAGGCAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRWEKCG*GRGRQV
Trigger: GACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCA...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCACTGAAAGCTCTCTGGTaGCCTTCTGGAGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRALKALW*PSGAPH
Trigger: ATGGGGAGCTCCAGAAGGTCACCAGAGAGCTTTCAG...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCCTCCTGAGAGCATCTaGCACCCAGAGGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGPPESI*HPEATL
Trigger: CAGGGTGGCCTCTGGGTGTCAGATGCTCTCAGGAGG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTGGCTGGGCACCCTCCTaGGAGCATCTGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGGWAPS*EHLTPR
Trigger: TCTGGGTGTCAGATGCTCTCAGGAGGGTGCCCAGCC...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACATCATGCATGCCCTCCTaGTGGGCTCTCAACACACGC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETSCMPS*WALNTR
Trigger: GCGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGA...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCTGCCACGTGAGGACATaGCCCTGGAAGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFCHVRT*PWKWVL
Trigger: GAGGACCCACTTCCAGGGTCATGTCCTCACGTGGCA...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACCGGTAGCCTCTCACTaGAGCACATGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSPVASH*STCPGP
Trigger: GGGCCCTGGACATGTGCTGCAGTGAGAGGCTACCGG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCCCTCCTGCCGCAGCTaGTGGCAGCAGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRPSCRS*WQQMLV
Trigger: CACCAGCATCTGCTGCCAGCAGCTGCGGCAGGAGGG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGCAGGCAAGTCCGGTTaGTTAGGGGCTGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETAGKSG*LGAGAH
Trigger: ATGAGCTCCAGCCCCTAAGCAACCGGACTTGCCTGC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATTCTGGAGCTCCCCATaGCTAACTCCCCGTCATCTG +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAFWSSP*LTPRHL
Trigger: CAGATGACGGGGAGTTAGGCATGGGGAGCTCCAGAA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCCTCTGGGTTCTCCATaGCCCATCTGCCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFPLGSP*PICPLP
Trigger: AGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAGG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCACTCCCCGCTTCACTaGCACCTTGACCTTTATCAT +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAHSPLH*HLDLYH
Trigger: ATGATAAAGGTCAAGGTGGCAGTGAAGCGGGGAGTG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCTCCATCACTATCGGCTaGGGGAGACCCGGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFSITIG*GRPGSL
Trigger: GAGGCTACCGGGTCTCCCCCAGCCGATAGTGATGGA...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR CCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTAGGAGACGAGGTTTGTaGCGTTCTGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQARRRGL*RSVTRC
Trigger: ACATCTGGTCACAGAACGCCACAAACCTCGTCTCCT...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CCA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCGAGGGTTGGGAAGTATaGTTTTGTACCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSEGWEV*FCTGSS
Trigger: GGAAGAACCGGTACAAAACCATACTTCCCAACCCTC...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTTCCTGCCGCAGCTGCTaGCAGCAGATGCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGSCRSC*QQMLVA
Trigger: TGCCACCAGCATCTGCTGCCAGCAGCTGCGGCAGGA...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCCGAGGCAGGGCCCTaGGTGAGGGCCGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPEAGP*VRAETQ
Trigger: CTGAGTCTCGGCCCTCACCCAGGGCCCTGCCTCGGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCACGGTTGCTTAGGGGCTaGAGCTCATTACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRARLLRG*SSLPLP
Trigger: AGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCG...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCTCTCAACACACGCATaGACATGGGAACACACGCAG +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQLSTHA*TWEHTQ
Trigger: CTGCGTGTGTTCCCATGTCCATGCGTGTGTTGAGAG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCAAAGGGGGCAGAGTTaGGGGAGGGAGTCGGCTCAT +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFQRGQS*GRESAH
Trigger: ATGAGCCGACTCCCTCCCCCAACTCTGCCCCCTTTG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCGGCATCTCTCTCTGTaGGTCCTGGAGCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGRHLSL*VLEPFS
Trigger: GCTGAAGGGCTCCAGGACTCACAGAGAGAGATGCCG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGCGAGGTGGTGGCTTCTaGGCTGGATCTGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARRGGGF*AGSEGG
Trigger: GCCGCCCTCAGATCCAGCTCAGAAGCCACCACCTCG...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR TCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAGGCAAGCAGGAACTGTaGGGCAGCGAACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSGKQEL*GSEQAQ
Trigger: CTGTGCCTGTTCGCTGCCTCACAGTTCCTGCTTGCC...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396168.1
CDS-3UTR TCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGTTTGTGGCGTTCTGTaGCCAGATGTGGCCATAACC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAVCGVL*PDVAIT
Trigger: GGTTATGGCCACATCTGGTCACAGAACGCCACAAAC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR TCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGGTCAGCCTCAGGCTTaGTGTCCATCACACAATCAA +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQGQPQA*CPSHNQ
Trigger: TTGATTGTGTGATGGACATCAAGCCTGAGGCTGACC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCTGACGATGGGTCCCTaGGTGGCGATGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFLTMGP*VAMYTF
Trigger: GAAGGTGTACATCGCCACTCAGGGACCCATCGTCAG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGAGTCGGCGACCGTGCTaGCGATGGGTCCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTSRRPC*RWVPEW
Trigger: CCACTCAGGGACCCATCGTCAGCACGGTCGCCGACT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGAGTCGGCGACCGTGCTaGCGATGGGTCCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLESRRPC*RWVPEW
Trigger: CCACTCAGGGACCCATCGTCAGCACGGTCGCCGACT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACATGCCGCCCCTGTCCTaGCGGAGCTGGCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHMPPLS*RSWHVV
Trigger: GACCACGTGCCAGCTCCGTCAGGACAGGGGCGGCAT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAATGCCGCCCCTGTCCTaGCGGAGCTGGCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETMPPLS*RSWHVV
Trigger: GACCACGTGCCAGCTCCGTCAGGACAGGGGCGGCAT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGTGGGAGAAGTGCGGGTaGGGCCGAGGCAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEWEKCG*GRGRQV
Trigger: GACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCA...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGTGGGAGAAGTGCGGGTaGGGCCGAGGCAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTWEKCG*GRGRQV
Trigger: GACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCA...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTTGGGAGAAGTGCGGGTaGGGCCGAGGCAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLWEKCG*GRGRQV
Trigger: GACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCA...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAACTCCTTCTGCCACGTaGGGACATGACCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETTPSAT*GHDPGS
Trigger: ACTTCCAGGGTCATGTCCTCACGTGGCAGAAGGAGT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGTCTGCGTGTGTCCCTaGTTGTGTCTGTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETVCVCP*LCLCQC
Trigger: ACACTGGCACAGACACAAGCAGGGACACACGCAGAC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAATGGGCGTGTGCTCCTaGCACACCATGCGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSMGVCS*HTMRQK
Trigger: CTTCTGGCGCATGGTGTGGCAGGAGCACACGCCCAT...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCCGGCCAATACTCGGTaGATTTCTCGTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQPANTR*ISRSSP
Trigger: AGGAGATGAACGAGAAATGCACCGAGTATTGGCCGG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGGTCCTCCCAATCCCTaGACTGCAGTGGACGATGAT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETGPPNP*TAVDDD
Trigger: ATCATCGTCCACTGCAGTGCAGGGATTGGGAGGACC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCCCTCCTGCCGCAGCTaGTGGCAGCAGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLPSCRS*WQQMLV
Trigger: CACCAGCATCTGCTGCCAGCAGCTGCGGCAGGAGGG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTTGCACAAACTGGTACTaGTCGCATGTCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQACTNWY*SHVWIM
Trigger: CATGATCCAGACATGCGAGCAGTACCAGTTTGTGCA...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAAGGCTCATGACGTGGTaGACAAACTGGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRARLMTW*TNWYCS
Trigger: CGAGCAGTACCAGTTTGTGCACCACGTCATGAGCCT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACATTCTGGAGCTCCCCATaGCTAACTCCCCGTCATCTG +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETFWSSP*LTPRHL
Trigger: CAGATGACGGGGAGTTAGGCATGGGGAGCTCCAGAA...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCCCCTACCTTGCCAGTaGCTCACAGGCTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLPLPCQ*LTGWAP
Trigger: GGGTGCCCAGCCTGTGAGGCACTGGCAAGGTAGGGG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCCCCTACCTTGCCAGTaGCTCACAGGCTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTPLPCQ*LTGWAP
Trigger: GGGTGCCCAGCCTGTGAGGCACTGGCAAGGTAGGGG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTATCTGCCCCCTACCTTaGCAGTGCCTCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGICPLP*QCLTGW
Trigger: CCAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGAT...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGCATGCAATACCAGGTaGCGAGGACTCGTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAACNTR*RGLVLG
Trigger: TCCTAGAACGAGTCCTCGGCACCTGGTATTGCATGC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGCGCTCCCCGCATGTTaGCAACACCTGCGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRALPAC*QHLRKW
Trigger: CCACTTGCGCAGGTGTTGGCAACATGCGGGGAGCGC...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGAGACGAGGTTTGTaGCGTTCTGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQRRRGL*RSVTRC
Trigger: ACATCTGGTCACAGAACGCCACAAACCTCGTCTCCT...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGGCGGACTCCTCACGTaGGGACATGAGATAGCCAAA +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETGGLLT*GHEIAK
Trigger: TTTGGCTATCTCATGTCCCCACGTGAGGAGTCCGCC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGATGATGGGGGCACAGTaGGGCCCCTCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARMMGAQ*GPSCWA
Trigger: AGCCCAGCAGGAGGGGCCCCACTGTGCCCCCATCAT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCATCCCTGCACTGCAGTaGACGATGATGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFIPALQ*TMMGAQ
Trigger: CTGTGCCCCCATCATCGTCCACTGCAGTGCAGGGAT...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAACGTGGTGCACAAACTaGTACTGCTCGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRATWCTN*YCSHVW
Trigger: CCAGACATGCGAGCAGTACCAGTTTGTGCACCACGT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAAGTCATTCTGGGGACTaGTGGGACAGCTGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRASHSGD*WDSCFS
Trigger: CGAAAAGCAGCTGTCCCACCAGTCCCCAGAATGACT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCGAAGCGCAGTCATTCTaGGGACTGGTGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFEAQSF*GLVGQL
Trigger: CAGCTGTCCCACCAGTCCCCAGAATGACTGCGCTTC...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATCTCTGGTGACCTTCTaGAGCTCCCCATGCCTAACT +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRASLVTF*SSPCLT
Trigger: AGTTAGGCATGGGGAGCTCCAGAAGGTCACCAGAGA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCTCCCTGTTCAGCCTCTaGGGAGCTAGAGCGAGTGGA +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFSLFSL*GARASG
Trigger: TCCACTCGCTCTAGCTCCCCAGAGGCTGAACAGGGA...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR TCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTTGTGGCCATAACCGCTaGACCAGAGCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRCGHNR*TRAPHR
Trigger: CCTGTGGGGTGCTCTGGTTCAGCGGTTATGGCCACA...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR TCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACTCCTCCATCCACTCTaGGTAGGTGAAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSLLHPL*VGEGGL
Trigger: CAGCCCTCCTTCACCTACTCAGAGTGGATGGAGGAG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGGTCAGCCTCAGGCTTaGTGTCCATCACACAATCAA +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAGQPQA*CPSHNQ
Trigger: TTGATTGTGTGATGGACATCAAGCCTGAGGCTGACC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCTGACGATGGGTCCCTaGGTGGCGATGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGLTMGP*VAMYTF
Trigger: GAAGGTGTACATCGCCACTCAGGGACCCATCGTCAG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAGGTCGGGCCAGGATGTaGACCAGTAATGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSGRARM*TSNASG
Trigger: GCCTGAAGCATTACTGGTTCACATCCTGGCCCGACC...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCACTGCAGTGGACGATaGTGGGGGCACAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHHCSGR*WGHSGA
Trigger: GGCCCCACTGTGCCCCCATCATCGTCCACTGCAGTG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTTTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGLPLPG*GDTVSG
Trigger: ACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAA...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCCTCCTGAGAGCATCTaGCACCCAGAGGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTPPESI*HPEATL
Trigger: CAGGGTGGCCTCTGGGTGTCAGATGCTCTCAGGAGG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGGCTGGGCACCCTCCTaGGAGCATCTGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARGWAPS*EHLTPR
Trigger: TCTGGGTGTCAGATGCTCTCAGGAGGGTGCCCAGCC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACACGTAGATCTGGGCTaGGTCCCCACCCAAACCTTG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSHVDLG*VPTQTL
Trigger: CAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGAGCAACACGCAGTaGGACTTCTGGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETQSNTQ*DFWEGF
Trigger: AAAGCCTTCCCAGAAGTCTCACTGCGTGTTGCTCTG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCATCATGCATGCCCTCCTaGTGGGCTCTCAACACACGC +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSSCMPS*WALNTR
Trigger: GCGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGA...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCTCGTTCTAGGACGCTaGGGAGGCGTCCTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGLVLGR*GGVLFP
Trigger: GGGAAAAAGGACGCCTCCTCAGCGTCCTAGAACGAG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR TCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAGACCCTTAACCCCTaGCCTCATCTCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGQTLNP*PHLRCL
Trigger: GAGGCACCTGAGATGAGGTCAGGGGTTAAGGGTCTG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTATGCGCGCGCGAGTGTaGGTGTGTCTGCGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLMRARV*VCLRVS
Trigger: GGACACACGCAGACACACGCACACTCGCGCGCGCAT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCCGGTAGCCTCTCACTaGAGCACATGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLPVASH*STCPGP
Trigger: GGGCCCTGGACATGTGCTGCAGTGAGAGGCTACCGG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACAAAGCCCTCCTCGTTaGAGCCCGGAGTGCACATGT +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSQSPPR*SPECTC
Trigger: ACATGTGCACTCCGGGCTGCAACGAGGAGGGCTTTG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACATCAAAGAATTCCGCCTaGAGCAGGAAAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETSKNSA*SRKGSR
Trigger: CCTGGACCCTTTCCTGCTGCAGGCGGAATTCTTTGA...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAAGGTCAGACACACTCTaGTGTGAGGGTTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRARSDTL*CEGWEV
Trigger: TACTTCCCAACCCTCACAGCAGAGTGTGTCTGACCT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCCGTCGTACGCCACCTaGTCCTCCGGCCAATACTCG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTPSYAT*SSGQYS
Trigger: CGAGTATTGGCCGGAGGAGCAGGTGGCGTACGACGG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCGGTCCTCCCAATCCCTaGACTGCAGTGGACGATGAT +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFGPPNP*TAVDDD
Trigger: ATCATCGTCCACTGCAGTGCAGGGATTGGGAGGACC...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCCTCCTGCCGCAGCTaGTGGCAGCAGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPSCRS*WQQMLV
Trigger: CACCAGCATCTGCTGCCAGCAGCTGCGGCAGGAGGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACCCTCCTGCCGCAGCTaGTGGCAGCAGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETPSCRS*WQQMLV
Trigger: CACCAGCATCTGCTGCCAGCAGCTGCGGCAGGAGGG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCGCATGTCTGGATCATaGCGCCCCTGTCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRRMSGS*RPCPDG
Trigger: TCCGTCAGGACAGGGGCGGCATGATCCAGACATGCG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGTGCACAAACTGGTACTaGTCGCATGTCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQCTNWY*SHVWIM
Trigger: CATGATCCAGACATGCGAGCAGTACCAGTTTGTGCA...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAAGGCTCATGACGTGGTaGACAAACTGGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETRLMTW*TNWYCS
Trigger: CGAGCAGTACCAGTTTGTGCACCACGTCATGAGCCT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGTCCCTTCCCGACCCTaGCCCCCACTCCCCAATATG +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARVPSRP*PPLPNM
Trigger: CATATTGGGGAGTGGGGGGCAGGGTCGGGAAGGGAC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGGTCCCTTCCCGACCCTaGCCCCCACTCCCCAATATG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTVPSRP*PPLPNM
Trigger: CATATTGGGGAGTGGGGGGCAGGGTCGGGAAGGGAC...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAGCAGGCAAGTCCGGTTaGTTAGGGGCTGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSAGKSG*LGAGAH
Trigger: ATGAGCTCCAGCCCCTAAGCAACCGGACTTGCCTGC...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACCCCTACCTTGCCAGTaGCTCACAGGCTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETPLPCQ*LTGWAP
Trigger: GGGTGCCCAGCCTGTGAGGCACTGGCAAGGTAGGGG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTTCTCCATGCCCCATCTaGCCCCTACCTTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRSPCPI*PLPCQC
Trigger: GCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGA...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTGACCGCCTCACCAAATaGGCTTCAGCTGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGDRLTK*ASAAES
Trigger: CGACTCTGCAGCTGAAGCGCATTTGGTGAGGCGGTC...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATCTTGCCTTTGGTCCTaGCCCAACAACTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRASCLWS*PNNFRI
Trigger: GATCCTGAAGTTGTTGGGGCAGGACCAAAGGCAAGA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCCCAAGGTGTCTGGATaGGGAAGGGTGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGPKVSG*GRVPSS
Trigger: GGAAGATGGCACCCTTCCCCATCCAGACACCTTGGG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTGGGTCAGGGAGACATTaGAACCCCTCCTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGGSGRH*NPSSPA
Trigger: TGCAGGAGAGGAGGGGTTCCAATGTCTCCCTGACCC...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAGGGTCAGGGAGACATTaGAACCCCTCCTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSGSGRH*NPSSPA
Trigger: TGCAGGAGAGGAGGGGTTCCAATGTCTCCCTGACCC...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAATCCCTGCACTGCAGTaGACGATGATGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSIPALQ*TMMGAQ
Trigger: CTGTGCCCCCATCATCGTCCACTGCAGTGCAGGGAT...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGTCCTGCCGCAGCTGCTaGCAGCAGATGCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARSCRSC*QQMLVA
Trigger: TGCCACCAGCATCTGCTGCCAGCAGCTGCGGCAGGA...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGTCCTGCCGCAGCTGCTaGCAGCAGATGCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLESCRSC*QQMLVA
Trigger: TGCCACCAGCATCTGCTGCCAGCAGCTGCGGCAGGA...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAACGTGGTGCACAAACTaGTACTGCTCGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETTWCTN*YCSHVW
Trigger: CCAGACATGCGAGCAGTACCAGTTTGTGCACCACGT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTGAAGCGCAGTCATTCTaGGGACTGGTGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGEAQSF*GLVGQL
Trigger: CAGCTGTCCCACCAGTCCCCAGAATGACTGCGCTTC...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACTCATTACCCCTTCCTaGCTGAGGAGACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETLITPS*LRRHSV
Trigger: GACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACATCTCTGGTGACCTTCTaGAGCTCCCCATGCCTAACT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETSLVTF*SSPCLT
Trigger: AGTTAGGCATGGGGAGCTCCAGAAGGTCACCAGAGA...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCGAGTCATCAGCAGCGTaGTTCTCTCTCTCACTCCGG +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFESSAA*FSLSLR
Trigger: CCGGAGTGAGAGAGAGAACCACGCTGCTGATGACTC...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396168.1
CDS-3UTR CCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTAGGAGGGCGGAGGAGTaGGAGCAGCGCATCCATTTC +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRRRAEE*EQRIHF
Trigger: GAAATGGATGCGCTGCTCCCACTCCTCCGCCCTCCT...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGTGTACAACACACATCTaGACATGCTGCTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQCTTHI*TCCSPA
Trigger: AGCAGGAGAGCAGCATGTCCAGATGTGTGTTGTACA...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGAGAACCCTGTACGGCTaGGAGCTCAGGGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTRTLYG*ELRGRG
Trigger: TCCCCGACCCCTGAGCTCCCAGCCGTACAGGGTTCT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGGGCAAGCAGGAACTGTaGGGCAGCGAACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEGKQEL*GSEQAQ
Trigger: CTGTGCCTGTTCGCTGCCTCACAGTTCCTGCTTGCC...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396168.1
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGGTCAGCCTCAGGCTTaGTGTCCATCACACAATCAA +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETGQPQA*CPSHNQ
Trigger: TTGATTGTGTGATGGACATCAAGCCTGAGGCTGACC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAAGACACACTCTGCTGTaGGGGTTGGGAAGTATGGTT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETRHTLL*GLGSMV
Trigger: AACCATACTTCCCAACCCTCACAGCAGAGTGTGTCT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCTGACGATGGGTCCCTaGGTGGCGATGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRLTMGP*VAMYTF
Trigger: GAAGGTGTACATCGCCACTCAGGGACCCATCGTCAG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACATTTCGTAGAGGCTCATaGCGTGGTGCACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETFRRGS*RGAQTG
Trigger: ACCAGTTTGTGCACCACGTCATGAGCCTCTACGAAA...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACTGAAAGCTCTCTGGTaGCCTTCTGGAGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSLKALW*PSGAPH
Trigger: ATGGGGAGCTCCAGAAGGTCACCAGAGAGCTTTCAG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCTCCTGAGAGCATCTaGCACCCAGAGGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPPESI*HPEATL
Trigger: CAGGGTGGCCTCTGGGTGTCAGATGCTCTCAGGAGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTTTCCAGCAGGAACTGTaGGGCAGCGAACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRFQQEL*GSEQAQ
Trigger: CTGTGCCTGTTCGCTGCCTCACAGTTCCTGCTGGAA...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR TCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCGAGGTGATGAAGTCATaGGAACGGAGCCCTCACGAA +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFEVMKS*ERSPHE
Trigger: TTCGTGAGGGCTCCGTTCTCATGACTTCATCACCTC...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCATTCAGCCTCGTCCAGTaGCTCCATCACTATCGGCTG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSFSLVQ*LHHYRL
Trigger: CAGCCGATAGTGATGGAGGCACTGGACGAGGCTGAA...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGATGGGCGTGTGCTCCTaGCACACCATGCGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARMGVCS*HTMRQK
Trigger: CTTCTGGCGCATGGTGTGGCAGGAGCACACGCCCAT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGCGCATGTCTGGATCATaGCGCCCCTGTCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARRMSGS*RPCPDG
Trigger: TCCGTCAGGACAGGGGCGGCATGATCCAGACATGCG...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCGCATGTCTGGATCATaGCGCCCCTGTCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLRMSGS*RPCPDG
Trigger: TCCGTCAGGACAGGGGCGGCATGATCCAGACATGCG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACGTCCCTTCCCGACCCTaGCCCCCACTCCCCAATATG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHVPSRP*PPLPNM
Trigger: CATATTGGGGAGTGGGGGGCAGGGTCGGGAAGGGAC...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGATCTGCCCCCTACCTTaGCAGTGCCTCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARICPLP*QCLTGW
Trigger: CCAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGAT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGTCTCCATGCCCCATCTaGCCCCTACCTTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLESPCPI*PLPCQC
Trigger: GCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGA...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGCCTCTGGGTTCTCCATaGCCCATCTGCCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARPLGSP*PICPLP
Trigger: AGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAGG...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCCAAAGAGTCATGCATaGCCTCCTGATGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFPKSHA*PPDGLS
Trigger: TGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCAGTCGTCGCCCCCATaGCAAGGTTGCTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRQSSPP*QGCLDK
Trigger: CTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCAAATGCGCTTCAGCTaGAGAGTCGCTGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLQMRFS*RVAGAA
Trigger: GGCTGCGCCAGCGACTCTGCAGCTGAAGCGCATTTG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTTGCCTCGCCTGCGCCTaGGTGACTCGCCTCTATCTT +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLCLACA*VTRLYL
Trigger: AAGATAGAGGCGAGTCACGCAGGCGCAGGCGAGGCA...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCTCTTCTTCGCCTCTTaGTGTGCCTCGCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLLFFAS*CASPAP
Trigger: AGGCGCAGGCGAGGCACAGCAAGAGGCGAAGAAGAG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCCAGCGCCTCGAGGTaGTGGCTTCTGAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPSASR*WLLSWI
Trigger: GATCCAGCTCAGAAGCCACCACCTCGAGGCGCTGGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAAGGAGACGAGGTTTGTaGCGTTCTGTGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETRRRGL*RSVTRC
Trigger: ACATCTGGTCACAGAACGCCACAAACCTCGTCTCCT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACGATGGGTCCCTGAGTaGCGATGTACACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSRWVPE*RCTPSP
Trigger: AGGAGAAGGTGTACATCGCCACTCAGGGACCCATCG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCGGTCTGGGGTCTTCTaGTCGGGCCAGGATGTGAAC +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTRSGVF*SGQDVN
Trigger: GTTCACATCCTGGCCCGACCAGAAGACCCCAGACCG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACATCCTGCCGCAGCTGCTaGCAGCAGATGCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETSCRSC*QQMLVA
Trigger: TGCCACCAGCATCTGCTGCCAGCAGCTGCGGCAGGA...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGACGGAGCTGGCACGTaGTCTTCAGGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRDGAGT*SSGCPP
Trigger: TGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTC...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTACCATCGTTAAAAACTaGAGCCCGGGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGTIVKN*SPGSAW
Trigger: CCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGT...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCTCATTACCCCTTCCTaGCTGAGGAGACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFLITPS*LRRHSV
Trigger: GACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCTCTCTGGTGACCTTCTaGAGCTCCCCATGCCTAACT +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFSLVTF*SSPCLT
Trigger: AGTTAGGCATGGGGAGCTCCAGAAGGTCACCAGAGA...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCCTCTCAACACACGCATaGACATGGGAACACACGCAG +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFLSTHA*TWEHTQ
Trigger: CTGCGTGTGTTCCCATGTCCATGCGTGTGTTGAGAG...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTGGCACGCACCTGTTTTaGTTTTCTCGTGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGGTHLF*FSRGHQ
Trigger: CTGGTGCCCACGAGAAAACCAAAACAGGTGCGTGCC...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCAACACCTGCGCAAGTaGAGCGGCCCCATACTAGGG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLQHLRK*SGPILG
Trigger: CCCTAGTATGGGGCCGCTCCACTTGCGCAGGTGTTG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCATGCCAAGGTTGCTTaGACAAGGAGGGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRHAKVA*TRRAEE
Trigger: CTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACGGAGCCCTCACGAATaGGATCAGTGCTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETRSPHE*DQCSYK
Trigger: TTTGTAAGAGCACTGATCCCATTCGTGAGGGCTCCG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACGGCATCTCTCTCTGTaGGTCCTGGAGCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETRHLSL*VLEPFS
Trigger: GCTGAAGGGCTCCAGGACTCACAGAGAGAGATGCCG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACATCCACTCTGAGTAGGTaGAGGAGGGCTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETSTLSR*RRAGGS
Trigger: TGAGCCGCCAGCCCTCCTTCACCTACTCAGAGTGGA...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCTCCTCCATCCACTCTaGGTAGGTGAAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTLLHPL*VGEGGL
Trigger: CAGCCCTCCTTCACCTACTCAGAGTGGATGGAGGAG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCCTCACGTGGGGACATaGGATAGCCAAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEPHVGT*DSQSPP
Trigger: AGGAGGGCTTTGGCTATCTCATGTCCCCACGTGAGG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGCCTCACGTGGGGACATaGGATAGCCAAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARPHVGT*DSQSPP
Trigger: AGGAGGGCTTTGGCTATCTCATGTCCCCACGTGAGG...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCATCCAGGGCCTTTTCATaGAGCTCTTCTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSSRAFS*SSSAWR
Trigger: CCTCCAAGCAGAAGAGCTTCATGAAAAGGCCCTGGA...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGGGTCGGGCCAGGATGTaGACCAGTAATGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTGRARM*TSNASG
Trigger: GCCTGAAGCATTACTGGTTCACATCCTGGCCCGACC...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTAGATGCTGGTGGCAATaGAGCAGCCGGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLRCWWQ*SSRSSQ
Trigger: TTGGGAGGACCGGCTGCTTCATTGCCACCAGCATCT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCACGTAGATCTGGGCTaGGTCCCCACCCAAACCTTG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTHVDLG*VPTQTL
Trigger: CAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCACGTAGATCTGGGCTaGGTCCCCACCCAAACCTTG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEHVDLG*VPTQTL
Trigger: CAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAAAGGCTTTCCCACAGTaGCACAGAAAAATGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAKAFPQ*HRKMSH
Trigger: GTGAGACATTTTTCTGTGTCACTGTGGGAAAGCCTT...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTTCATGCATGCCCTCCTaGTGGGCTCTCAACACACGC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLSCMPS*WALNTR
Trigger: GCGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGA...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGTCATGCATGCCCTCCTaGTGGGCTCTCAACACACGC +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLESCMPS*WALNTR
Trigger: GCGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGA...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTCGCCTGCGCCTGCGTaGCTCGCCTCTATCTTAGTG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHSPAPA*LASILV
Trigger: CACTAAGATAGAGGCGAGTCACGCAGGCGCAGGCGA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTTTCATGAAGCTCTTCTaGTTGGAGGACACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGFMKLF*LEDTGG
Trigger: GCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCATGAA...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACATGGGCGTGTGCTCCTaGCACACCATGCGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHMGVCS*HTMRQK
Trigger: CTTCTGGCGCATGGTGTGGCAGGAGCACACGCCCAT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGACAATGATGGGCGTGTaGTCCTGCCACACCATGCGC +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTTMMGV*SCHTMR
Trigger: GCGCATGGTGTGGCAGGAGCACACGCCCATCATTGT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACATGCACAAACTGGTACTaGTCGCATGTCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETCTNWY*SHVWIM
Trigger: CATGATCCAGACATGCGAGCAGTACCAGTTTGTGCA...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAATCTGCCCCCTACCTTaGCAGTGCCTCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETICPLP*QCLTGW
Trigger: CCAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGAT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTCTCCATGCCCCATCTaGCCCCTACCTTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHSPCPI*PLPCQC
Trigger: GCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTCAAGATAATACATGTTaGCAAAGAGTCATGCATGCC +
Preference number: 4 (lower is better)
Translates to: LWVLHAPSAPYLASASQAQDNTC*QRVMHA
Trigger: GGCATGCATGACTCTTTGGCAACATGTATTATCTTG...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACATGTGCCCCACAATCCTaGCACAATCTTCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETCAPQS*HNLPYS
Trigger: AGAATACGGAAGATTGTGGCAGGATTGTGGGGCACA...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR GCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAACACACATCTGGACATaGTGCTCTCCTGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETTHIWT*CSPAEN
Trigger: GTTTTCAGCAGGAGAGCAGCATGTCCAGATGTGTGT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCGTTGGCATGGATCTTaGCTTTGGTCCTGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRRWHGS*LWSCPN
Trigger: GTTGGGGCAGGACCAAAGGCAAGATCCATGCCAACG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAGCCTCAACCTGGCCCTaGATGGAGGCTCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETASTWP*MEAPEP
Trigger: AGGTTCAGGAGCCTCCATGCAGGGCCAGGTTGAGGC...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477854.5
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTCCATCACTATCGGCTaGGGGAGACCCGGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHSITIG*GRPGSL
Trigger: GAGGCTACCGGGTCTCCCCCAGCCGATAGTGATGGA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR CCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTAGTCAAGCCAGGCCGTaGGTTCCAGCTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRSQARP*VPAVSG
Trigger: TCCTGAAACAGCTGGAACCCACGGCCTGGCTTGACT...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGGGTCAGGGAGACATTaGAACCCCTCCTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLGSGRH*NPSSPA
Trigger: TGCAGGAGAGGAGGGGTTCCAATGTCTCCCTGACCC...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGAGGGTTGGGAAGTATaGTTTTGTACCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETEGWEV*FCTGSS
Trigger: GGAAGAACCGGTACAAAACCATACTTCCCAACCCTC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCGATGGGTCCCTGAGTaGCGATGTACACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRRWVPE*RCTPSP
Trigger: AGGAGAAGGTGTACATCGCCACTCAGGGACCCATCG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGATCCCTGCACTGCAGTaGACGATGATGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEIPALQ*TMMGAQ
Trigger: CTGTGCCCCCATCATCGTCCACTGCAGTGCAGGGAT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGGACGGAGCTGGCACGTaGTCTTCAGGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTDGAGT*SSGCPP
Trigger: TGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTC...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGACGGAGCTGGCACGTaGTCTTCAGGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARDGAGT*SSGCPP
Trigger: TGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTTACTGCTCGCATGTCTaGATCATGCCGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLYCSHV*IMPPLS
Trigger: GGACAGGGGCGGCATGATCCAGACATGCGAGCAGTA...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGTACTGCTCGCATGTCTaGATCATGCCGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARYCSHV*IMPPLS
Trigger: GGACAGGGGCGGCATGATCCAGACATGCGAGCAGTA...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAAGTCATTCTGGGGACTaGTGGGACAGCTGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSSHSGD*WDSCFS
Trigger: CGAAAAGCAGCTGTCCCACCAGTCCCCAGAATGACT...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGAAGCGCAGTCATTCTaGGGACTGGTGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVAREAQSF*GLVGQL
Trigger: CAGCTGTCCCACCAGTCCCCAGAATGACTGCGCTTC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCATCTCTGGTGACCTTCTaGAGCTCCCCATGCCTAACT +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSSLVTF*SSPCLT
Trigger: AGTTAGGCATGGGGAGCTCCAGAAGGTCACCAGAGA...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTTCTCTGGTGACCTTCTaGAGCTCCCCATGCCTAACT +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGSLVTF*SSPCLT
Trigger: AGTTAGGCATGGGGAGCTCCAGAAGGTCACCAGAGA...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTACACACGCATGGACATaGGAACACACGCAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGTHAWT*EHTQSN
Trigger: GTTGCTCTGCGTGTGTTCCCATGTCCATGCGTGTGT...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACGGTCGGGCCAGGATGTaGACCAGTAATGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHGRARM*TSNASG
Trigger: GCCTGAAGCATTACTGGTTCACATCCTGGCCCGACC...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAGGTCGGGCCAGGATGTaGACCAGTAATGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETGRARM*TSNASG
Trigger: GCCTGAAGCATTACTGGTTCACATCCTGGCCCGACC...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAAGATGCTGGTGGCAATaGAGCAGCCGGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETRCWWQ*SSRSSQ
Trigger: TTGGGAGGACCGGCTGCTTCATTGCCACCAGCATCT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCATTTCGTAGAGGCTCATaGCGTGGTGCACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSFRRGS*RGAQTG
Trigger: ACCAGTTTGTGCACCACGTCATGAGCCTCTACGAAA...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACATTACCCCTTCCTGGCTaGGGAGACACAGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETLPLPG*GDTVSG
Trigger: ACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAA...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCTGAAAGCTCTCTGGTaGCCTTCTGGAGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLELKALW*PSGAPH
Trigger: ATGGGGAGCTCCAGAAGGTCACCAGAGAGCTTTCAG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAAAGGCTTTCCCACAGTaGCACAGAAAAATGTCTCAC +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETKAFPQ*HRKMSH
Trigger: GTGAGACATTTTTCTGTGTCACTGTGGGAAAGCCTT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCAACATGGTGGTATTTaGAGGGAGGGCCTTTGCGAG +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRQHGGI*REGLCE
Trigger: CTCGCAAAGGCCCTCCCTTCAAATACCACCATGTTG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGACACAGGAAGAACACTaGGAGTGGGACCCCTTCACC +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARTQEEH*EWDPFT
Trigger: GGTGAAGGGGTCCCACTCTCAGTGTTCTTCCTGTGT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCCTGCTTGTGTCTGTaGCAGTGTGTATGCGACGGG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPCLCL*QCVCDG
Trigger: CCCGTCGCATACACACTGGCACAGACACAAGCAGGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS-3UTR GCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGTCTGCGTGTGTCCCTaGTTGTGTCTGTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARVCVCP*LCLCQC
Trigger: ACACTGGCACAGACACAAGCAGGGACACACGCAGAC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCTGGATGGGGAAGGGTaGCATCTTCCAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHLDGEG*HLPGQE
Trigger: TTCCTGCCCTGGAAGATGGCACCCTTCCCCATCCAG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGTTCAGCCTCGTCCAGTaGCTCCATCACTATCGGCTG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTFSLVQ*LHHYRL
Trigger: CAGCCGATAGTGATGGAGGCACTGGACGAGGCTGAA...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCAAAGCCCTCCTCGTTaGAGCCCGGAGTGCACATGT +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHQSPPR*SPECTC
Trigger: ACATGTGCACTCCGGGCTGCAACGAGGAGGGCTTTG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACCGGCCAATACTCGGTaGATTTCTCGTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSPANTR*ISRSSP
Trigger: AGGAGATGAACGAGAAATGCACCGAGTATTGGCCGG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCCAAAGAGTCATGCATaGCCTCCTGATGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRPKSHA*PPDGLS
Trigger: TGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCCATCTAGGCCACATTaGCCAGTGGCACCAGACACA +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLPSRPH*PVAPDT
Trigger: TGTGTCTGGTGCCACTGGGCAATGTGGCCTAGATGG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAGTCAAGCCAGGCCGTaGGTTCCAGCTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARSQARP*VPAVSG
Trigger: TCCTGAAACAGCTGGAACCCACGGCCTGGCTTGACT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CCA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGATCCACAAAGTTCATaGGGATTTCAAAGAATTCCG +
Preference number: 4 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQDPQSS*GFQRIP
Trigger: CGGAATTCTTTGAAATCCCCATGAACTTTGTGGATC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCGAGGGTTGGGAAGTATaGTTTTGTACCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFEGWEV*FCTGSS
Trigger: GGAAGAACCGGTACAAAACCATACTTCCCAACCCTC...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCGATGGGTCCCTGAGTaGCGATGTACACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTRWVPE*RCTPSP
Trigger: AGGAGAAGGTGTACATCGCCACTCAGGGACCCATCG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCGATGGGTCCCTGAGTaGCGATGTACACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLRWVPE*RCTPSP
Trigger: AGGAGAAGGTGTACATCGCCACTCAGGGACCCATCG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAATCCCTGCACTGCAGTaGACGATGATGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETIPALQ*TMMGAQ
Trigger: CTGTGCCCCCATCATCGTCCACTGCAGTGCAGGGAT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTACCATCGTTAAAAACTaGAGCCCGGGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLTIVKN*SPGSAW
Trigger: CCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCTCATTACCCCTTCCTaGCTGAGGAGACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRLITPS*LRRHSV
Trigger: GACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCGGTTGCTTAGGGGCTaGAGCTCATTACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLRLLRG*SSLPLP
Trigger: AGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCTTGGTTTTGGGGGTTaGTCAGCAGCGTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLLGFGG*SAALAW
Trigger: CCATGCCAACGCTGCTGACCAACCCCCAAAACCAAG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGTTTGTGGCGTTCTGTaGCCAGATGTGGCCATAACC +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARVCGVL*PDVAIT
Trigger: GGTTATGGCCACATCTGGTCACAGAACGCCACAAAC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGTCCAGGGCCTTTTCATaGAGCTCTTCTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLESRAFS*SSSAWR
Trigger: CCTCCAAGCAGAAGAGCTTCATGAAAAGGCCCTGGA...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGTCCAGGGCCTTTTCATaGAGCTCTTCTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARSRAFS*SSSAWR
Trigger: CCTCCAAGCAGAAGAGCTTCATGAAAAGGCCCTGGA...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTAGACACACTCTGCTGTaGGGGTTGGGAAGTATGGTT +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRRHTLL*GLGSMV
Trigger: AACCATACTTCCCAACCCTCACAGCAGAGTGTGTCT...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCAGAGCAACACGCAGTaGGACTTCTGGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLQSNTQ*DFWEGF
Trigger: AAAGCCTTCCCAGAAGTCTCACTGCGTGTTGCTCTG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCAGAGCAACACGCAGTaGGACTTCTGGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTQSNTQ*DFWEGF
Trigger: AAAGCCTTCCCAGAAGTCTCACTGCGTGTTGCTCTG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCAGAGCAACACGCAGTaGGACTTCTGGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEQSNTQ*DFWEGF
Trigger: AAAGCCTTCCCAGAAGTCTCACTGCGTGTTGCTCTG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGATGCTGCTCTCCTGCTaGAAACCTGTGGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARMLLSC*KPVALD
Trigger: GTCCAAAGCCACAGGTTTTCAGCAGGAGAGCAGCAT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTTCAGCCTCGTCCAGTaGCTCCATCACTATCGGCTG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHFSLVQ*LHHYRL
Trigger: CAGCCGATAGTGATGGAGGCACTGGACGAGGCTGAA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTTTCATGAAGCTCTTCTaGTTGGAGGACACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLFMKLF*LEDTGG
Trigger: GCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCATGAA...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGAGGCTCATGACGTGGTaGACAAACTGGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTRLMTW*TNWYCS
Trigger: CGAGCAGTACCAGTTTGTGCACCACGTCATGAGCCT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACATTCTGGAGCTCCCCATaGCTAACTCCCCGTCATCTG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETFWSSP*LTPRHL
Trigger: CAGATGACGGGGAGTTAGGCATGGGGAGCTCCAGAA...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCCAAAGAGTCATGCATaGCCTCCTGATGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTPKSHA*PPDGLS
Trigger: TGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCCAAAGAGTCATGCATaGCCTCCTGATGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLPKSHA*PPDGLS
Trigger: TGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACAGTCAAGCCAGGCCGTaGGTTCCAGCTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHSQARP*VPAVSG
Trigger: TCCTGAAACAGCTGGAACCCACGGCCTGGCTTGACT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CCA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGATCCACAAAGTTCATaGGGATTTCAAAGAATTCCG +
Preference number: 4 (lower is better)
Translates to: GAHYPFLAEETQCPVQRADPQSS*GFQRIP
Trigger: CGGAATTCTTTGAAATCCCCATGAACTTTGTGGATC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCTCTGCTGTGAGGGTTaGGAAGTATGGTTTTGTACC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGLCCEG*EVWFCT
Trigger: GGTACAAAACCATACTTCCCAACCCTCACAGCAGAG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTACGTGGTGCACAAACTaGTACTGCTCGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLTWCTN*YCSHVW
Trigger: CCAGACATGCGAGCAGTACCAGTTTGTGCACCACGT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGACGTGGTGCACAAACTaGTACTGCTCGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLETWCTN*YCSHVW
Trigger: CCAGACATGCGAGCAGTACCAGTTTGTGCACCACGT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGACGTGGTGCACAAACTaGTACTGCTCGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARTWCTN*YCSHVW
Trigger: CCAGACATGCGAGCAGTACCAGTTTGTGCACCACGT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTAGTCATTCTGGGGACTaGTGGGACAGCTGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLSHSGD*WDSCFS
Trigger: CGAAAAGCAGCTGTCCCACCAGTCCCCAGAATGACT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGAGTCATTCTGGGGACTaGTGGGACAGCTGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLESHSGD*WDSCFS
Trigger: CGAAAAGCAGCTGTCCCACCAGTCCCCAGAATGACT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGCTCATTACCCCTTCCTaGCTGAGGAGACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARLITPS*LRRHSV
Trigger: GACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAG...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCTCATTACCCCTTCCTaGCTGAGGAGACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLLITPS*LRRHSV
Trigger: GACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACGGTTGCTTAGGGGCTaGAGCTCATTACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETRLLRG*SSLPLP
Trigger: AGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTACACACGCATGGACATaGGAACACACGCAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLTHAWT*EHTQSN
Trigger: GTTGCTCTGCGTGTGTTCCCATGTCCATGCGTGTGT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCTCTCAACACACGCATaGACATGGGAACACACGCAG +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLLSTHA*TWEHTQ
Trigger: CTGCGTGTGTTCCCATGTCCATGCGTGTGTTGAGAG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGAAGCCAGCTTGGTTTTaGGGGTTGGTCAGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTKPAWF*GLVSSV
Trigger: AACGCTGCTGACCAACCCCCAAAACCAAGCTGGCTT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGGTCAGCCTCAGGCTTaGTGTCCATCACACAATCAA +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARGQPQA*CPSHNQ
Trigger: TTGATTGTGTGATGGACATCAAGCCTGAGGCTGACC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTCCAGGGCCTTTTCATaGAGCTCTTCTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHSRAFS*SSSAWR
Trigger: CCTCCAAGCAGAAGAGCTTCATGAAAAGGCCCTGGA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGTTTCGTAGAGGCTCATaGCGTGGTGCACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEFRRGS*RGAQTG
Trigger: ACCAGTTTGTGCACCACGTCATGAGCCTCTACGAAA...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGTTTCGTAGAGGCTCATaGCGTGGTGCACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTFRRGS*RGAQTG
Trigger: ACCAGTTTGTGCACCACGTCATGAGCCTCTACGAAA...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGTTTCGTAGAGGCTCATaGCGTGGTGCACAAACTGGT +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARFRRGS*RGAQTG
Trigger: ACCAGTTTGTGCACCACGTCATGAGCCTCTACGAAA...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACAGAGCAACACGCAGTaGGACTTCTGGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETQSNTQ*DFWEGF
Trigger: AAAGCCTTCCCAGAAGTCTCACTGCGTGTTGCTCTG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTTCATGAAGCTCTTCTaGTTGGAGGACACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHFMKLF*LEDTGG
Trigger: GCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCATGAA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTCAAAGAATTCCGCCTaGAGCAGGAAAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHSKNSA*SRKGSR
Trigger: CCTGGACCCTTTCCTGCTGCAGGCGGAATTCTTTGA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACATCAAAGAATTCCGCCTaGAGCAGGAAAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETSKNSA*SRKGSR
Trigger: CCTGGACCCTTTCCTGCTGCAGGCGGAATTCTTTGA...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAGGTCAGACACACTCTaGTGTGAGGGTTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARRSDTL*CEGWEV
Trigger: TACTTCCCAACCCTCACAGCAGAGTGTGTCTGACCT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCCGGCCAATACTCGGTaGATTTCTCGTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTPANTR*ISRSSP
Trigger: AGGAGATGAACGAGAAATGCACCGAGTATTGGCCGG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAAGGCTCATGACGTGGTaGACAAACTGGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETRLMTW*TNWYCS
Trigger: CGAGCAGTACCAGTTTGTGCACCACGTCATGAGCCT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCAAAGAGTCATGCATaGCCTCCTGATGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPKSHA*PPDGLS
Trigger: TGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACAGTCATTCTGGGGACTaGTGGGACAGCTGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHSHSGD*WDSCFS
Trigger: CGAAAAGCAGCTGTCCCACCAGTCCCCAGAATGACT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACACACGCATGGACATaGGAACACACGCAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHTHAWT*EHTQSN
Trigger: GTTGCTCTGCGTGTGTTCCCATGTCCATGCGTGTGT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACTCTCAACACACGCATaGACATGGGAACACACGCAG +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETLSTHA*TWEHTQ
Trigger: CTGCGTGTGTTCCCATGTCCATGCGTGTGTTGAGAG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCATGGATCTTGCCTTTaGTCCTGCCCCAACAACTTC +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTHGSCL*SCPNNF
Trigger: GAAGTTGTTGGGGCAGGACCAAAGGCAAGATCCATG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACGGAGGCCCTGTGTTCTaGATTCTTAGGTTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHGGPVF*ILRLGR
Trigger: CCTCCCTAACCTAAGAATCCAGAACACAGGGCCTCC...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477854.5
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACAGACACACTCTGCTGTaGGGGTTGGGAAGTATGGTT +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHRHTLL*GLGSMV
Trigger: AACCATACTTCCCAACCCTCACAGCAGAGTGTGTCT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAAGACACACTCTGCTGTaGGGGTTGGGAAGTATGGTT +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETRHTLL*GLGSMV
Trigger: AACCATACTTCCCAACCCTCACAGCAGAGTGTGTCT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGGGATGTAGTTGGCATTaGTGTAGGAACTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEGCSWH*CRNSEG
Trigger: ACCCTCTGAGTTCCTACATCAATGCCAACTACATCC...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGGGATGTAGTTGGCATTaGTGTAGGAACTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARGCSWH*CRNSEG
Trigger: ACCCTCTGAGTTCCTACATCAATGCCAACTACATCC...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAAGGTCAGACACACTCTaGTGTGAGGGTTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETRSDTL*CEGWEV
Trigger: TACTTCCCAACCCTCACAGCAGAGTGTGTCTGACCT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCGGCCAATACTCGGTaGATTTCTCGTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPANTR*ISRSSP
Trigger: AGGAGATGAACGAGAAATGCACCGAGTATTGGCCGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAAGTGTGGGAGATTTCTaGCTCATCCCCAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETSVGDF*LIPNCL
Trigger: GAGACAGTTGGGGATGAGGCAGAAATCTCCCACACT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCTCTGCTGTGAGGGTTaGGAAGTATGGTTTTGTACC +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLELCCEG*EVWFCT
Trigger: GGTACAAAACCATACTTCCCAACCCTCACAGCAGAG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGCTCTGCTGTGAGGGTTaGGAAGTATGGTTTTGTACC +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARLCCEG*EVWFCT
Trigger: GGTACAAAACCATACTTCCCAACCCTCACAGCAGAG...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACATGTCTCTGTCTGCCGTaGGATAAATATTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETCLCLP*DKYLKS
Trigger: TGACTTTAAATATTTATCCCACGGCAGACAGAGACA...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCAAATCCCAACATGGTaGTATTTGAAGGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLQIPTW*YLKGGP
Trigger: AGGCCCTCCCTTCAAATACCACCATGTTGGGATTTG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTAACCAAATCCCAACATaGTGGTATTTGAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRNQIPT*WYLKGG
Trigger: CCCTCCCTTCAAATACCACCATGTTGGGATTTGGTT...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGGAAAACCTGTGGCTTTaGACTGAATGTGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEENLWL*TECVCP
Trigger: GGGACACACACATTCAGTCCAAAGCCACAGGTTTTC...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCCTGCTGAAAACCTGTaGCTTTGGACTGAATGTGTG +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEPAENL*LWTECV
Trigger: CACACATTCAGTCCAAAGCCACAGGTTTTCAGCAGG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTATCATTGCTCGAGTGTaGGAGATTTCTGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLIIARV*EISASS
Trigger: GGATGAGGCAGAAATCTCCCACACTCGAGCAATGAT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACGGATGTAGTTGGCATTaGTGTAGGAACTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHGCSWH*CRNSEG
Trigger: ACCCTCTGAGTTCCTACATCAATGCCAACTACATCC...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGAAGGCTTTCCCACAGTaGCACAGAAAAATGTCTCAC +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTKAFPQ*HRKMSH
Trigger: GTGAGACATTTTTCTGTGTCACTGTGGGAAAGCCTT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTACAGACAGAACACATTaGAGCAGGACACAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRTDRTH*SRTQSV
Trigger: TACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGT...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAAGATAATACATGTTaGCAAAGAGTCATGCATGCC +
Preference number: 4 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGQDNTC*QRVMHA
Trigger: GGCATGCATGACTCTTTGGCAACATGTATTATCTTG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACAAGATAATACATGTTaGCAAAGAGTCATGCATGCC +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSQDNTC*QRVMHA
Trigger: GGCATGCATGACTCTTTGGCAACATGTATTATCTTG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAGATCCACAAAGTTCATaGGGATTTCAAAGAATTCCG +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSDPQSS*GFQRIP
Trigger: CGGAATTCTTTGAAATCCCCATGAACTTTGTGGATC...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCTGTCTCTGTCTGCCGTaGGATAAATATTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: AHSNLENSPSAESSLVTFCLCLP*DKYLKS
Trigger: TGACTTTAAATATTTATCCCACGGCAGACAGAGACA...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGCACGAATGGGATCAGTaGTCTTACAAAAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARHEWDQ*SYKRSF
Trigger: AAAGCTCCTTTTGTAAGAGCACTGATCCCATTCGTG...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCATGTCTCTGTCTGCCGTaGGATAAATATTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSCLCLP*DKYLKS
Trigger: TGACTTTAAATATTTATCCCACGGCAGACAGAGACA...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCCTTATCTTAACAAATaGTCCCCCAGTCATCCCTTT +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEPYLNK*SPSHPF
Trigger: AAAGGGATGACTGGGGGACCATTTGTTAAGATAAGG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCAGTCTCCAGAACTGTaGAAAATAAACCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTQSPEL*KINLLL
Trigger: AAGCAACAGGTTTATTTTTCACAGTTCTGGAGACTG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR GCA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCAAGATAATACATGTTaGCAAAGAGTCATGCATGCC +
Preference number: 4 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEQDNTC*QRVMHA
Trigger: GGCATGCATGACTCTTTGGCAACATGTATTATCTTG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR GCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCTTGACCTTTATCATTaGTCGAGTGTGGGAGATTTC +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHLDLYH*SSVGDF
Trigger: GAAATCTCCCACACTCGAGCAATGATAAAGGTCAAG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR TCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCTTAAGTTCACATGTTaGAACCAAATCCCAACATGG +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHLKFTC*NQIPTW
Trigger: CCATGTTGGGATTTGGTTTCAACATGTGAACTTAAG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CCA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGTGTCTCTGTCTGCCGTaGGATAAATATTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARCLCLP*DKYLKS
Trigger: TGACTTTAAATATTTATCCCACGGCAGACAGAGACA...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CCA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACTGCTTACAAGCTACCTaGTCTATGGTATTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHCLQAT*SMVFCY
Trigger: ATAACAAAATACCATAGACCAGGTAGCTTGTAAGCA...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CCA 90 bp GGGGGCGTCCGTCCTTCGGTGCCTCCGTCCTTCGGTCCGTCCGCCTaGCGCTCCGTCCCGCGCTCCGTGCGCGCTCCCTCGCCCGACCGC +
Preference number: 5 (lower is better)
Translates to: GGVRPSVPPSFGPSA*RSVPRSVRAPSPDR
Trigger: GCGGTCGGGCGAGGGAGCGCGCACGGAGCGCGGGACGGAGCGCCAGGCGGACGGACCGAAGGACGGAGGCACCGAAGGACGGACGCCCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS GCA 90 bp GCCGAGCTCTGTGCGTCTGCGTGTGCGGGGGCGTCCGTCCTTCGGTaGCTCCGTCCTTCGGTCCGTCCGCCTGGCGCTCCGTCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: AELCASACAGASVLR*LRPSVRPPGAPSRA
Trigger: AGCGCGGGACGGAGCGCCAGGCGGACGGACCGAAGGACGGAGGCACCGAAGGACGGACGCCCCCGCACACGCAGACGCACAGAGCTCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS GCA 90 bp TTCTCCTCTTGGGAGCCCCGGGTCGGGCCGCGCGGCTACGGCAACTaGCAGAGGGACCCCGGCAGGGCCGTGCGCGCTGAACCTGGGACG +
Preference number: 5 (lower is better)
Translates to: FSSWEPRVGPRGYGN*QRDPGRAVRAEPGT
Trigger: CGTCCCAGGTTCAGCGCGCACGGCCCTGCCGGGGTCCCTCTGGCAGTTGCCGTAGCCGCGCGGCCCGACCCGGGGCTCCCAAGAGGAGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 90 bp CTCCGTCCTTCGGTCCGTCCGCCTGGCGCTCCGTCCCGCGCTCCGTaGGCGCTCCCTCGCCCGACCGCCTCACCAAATGCGCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LRPSVRPPGAPSRAP*ALPRPTASPNALQL
Trigger: CAGCTGAAGCGCATTTGGTGAGGCGGTCGGGCGAGGGAGCGCGCACGGAGCGCGGGACGGAGCGCCAGGCGGACGGACCGAAGGACGGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS GCA 90 bp GTCCCGCGCTCCGTGCGCGCTCCCTCGCCCGACCGCCTCACCAAATaGGCTTCAGCTGCAGAGTCGCTGGCGCAGCCGCCGGGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: VPRSVRAPSPDRLTK*ASAAESLAQPPGGF
Trigger: AAACCCACCCGGCGGCTGCGCCAGCGACTCTGCAGCTGAAGCGCATTTGGTGAGGCGGTCGGGCGAGGGAGCGCGCACGGAGCGCGGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 90 bp GTGCCAGTGTGTATGCGACGGGGGCCGCGCCGAGCTCTGTGCGTCTaGGTGTGCGGGGGCGTCCGTCCTTCGGTGCCTCCGTCCTTCGGT +
Preference number: 5 (lower is better)
Translates to: VPVCMRRGPRRALCV*VCGGVRPSVPPSFG
Trigger: ACCGAAGGACGGAGGCACCGAAGGACGGACGCCCCCGCACACGCAGACGCACAGAGCTCGGCGCGGCCCCCGTCGCATACACACTGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS GCA 90 bp GTGTCTGTGCCAGTGTGTATGCGACGGGGGCCGCGCCGAGCTCTGTaGGTCTGCGTGTGCGGGGGCGTCCGTCCTTCGGTGCCTCCGTCC +
Preference number: 5 (lower is better)
Translates to: VSVPVCMRRGPRRAL*VCVCGGVRPSVPPS
Trigger: GGACGGAGGCACCGAAGGACGGACGCCCCCGCACACGCAGACGCACAGAGCTCGGCGCGGCCCCCGTCGCATACACACTGGCACAGACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS TCA 90 bp CTGACAGTGAGGGAGTGGCTCCCAGCGCCTCGAGGTGGTGGCTTCTaGGCTGGATCTGAGGGCGGCGAGGGAGGAGGGGGTGGCGGCATC +
Preference number: 5 (lower is better)
Translates to: LTVREWLPAPRGGGF*AGSEGGEGGGGGGI
Trigger: GATGCCGCCACCCCCTCCTCCCTCGCCGCCCTCAGATCCAGCTCAGAAGCCACCACCTCGAGGCGCTGGGAGCCACTCCCTCACTGTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000496201.2
CDS GCA 90 bp CGGCGAGCAGGCGGGCAGGCTGGCGGGAGGATGCGCGCGCGAGTGTaGGTGTGTCTGCGTGTGTCCCTGCTTGTGTCTGTGCCAGTGTGT +
Preference number: 5 (lower is better)
Translates to: RRAGGQAGGRMRARV*VCLRVSLLVSVPVC
Trigger: ACACACTGGCACAGACACAAGCAGGGACACACGCAGACACACGCACACTCGCGCGCGCATCCTCCCGCCAGCCTGCCCGCCTGCTCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS GCA 90 bp TCTCCCGAGCAACTCTGCGCGGAGTCTCCGCAGTCGTCGCCCCCATaGCAAGGTTGCTTGGACAAGGAGGGCGGAGGAGTGGGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: SPEQLCAESPQSSPP*QGCLDKEGGGVGAA
Trigger: CGCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTCCGCGCAGAGTTGCTCGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 90 bp GGCGGCGAGGGAGGAGGGGGTGGCGGCATCTCTCTCTGTGAGTCCTaGAGCCCTTCAGCCTCGTCCAGTGCCTCCATCACTATCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GGEGGGGGGISLCES*SPSASSSASITIGW
Trigger: CCAGCCGATAGTGATGGAGGCACTGGACGAGGCTGAAGGGCTCCAGGACTCACAGAGAGAGATGCCGCCACCCCCTCCTCCCTCGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000496201.2
CDS CCA 90 bp GGGCATGCCGTGGCGCTCCCCGCATGTTGCCAACACCTGCGCAAGTaGAGCGGCCCCATACTAGGGCGCATGCAATACCAGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GHAVALPACCQHLRK*SGPILGRMQYQVPR
Trigger: CCTCGGCACCTGGTATTGCATGCGCCCTAGTATGGGGCCGCTCCACTTGCGCAGGTGTTGGCAACATGCGGGGAGCGCCACGGCATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 90 bp GACACGGGAGGCGCTGAGCAGGTACTCGCGGGCGGACTCCTCACGTaGGGACATGAGATAGCCAAAGCCCTCCTCGTTGCAGCCCGGAGT +
Preference number: 5 (lower is better)
Translates to: DTGGAEQVLAGGLLT*GHEIAKALLVAARS
Trigger: ACTCCGGGCTGCAACGAGGAGGGCTTTGGCTATCTCATGTCCCCACGTGAGGAGTCCGCCCGCGAGTACCTGCTCAGCGCCTCCCGTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp CTCTGGGTTCTCCATGCCCCATCTGCCCCCTACCTTGCCAGTGCCTCACAGGCTGAGGGAGTCGGCTCATaGGGGGCATGCCGTGGCGCT +
Preference number: 5 (lower is better)
Translates to: LWVLHAPSAPYLASASQAEGVGS*GACRGA
Trigger: AGCGCCACGGCATGCCCCCAATGAGCCGACTCCCTC...AGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATGGGGCATGGAGAACCCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 90 bp TCCTGGAGCCCTTCAGCCTCGTCCAGTGCCTCCATCACTATCGGCTaGGGGAGACCTGTGGAAGATGGGCCATGCGGGCCGATGACTCCG +
Preference number: 5 (lower is better)
Translates to: SWSPSASSSASITIG*GRPVEDGPCGPMTP
Trigger: CGGAGTCATCGGCCCGCATGGCCCATCTTCCACAGGTCTCCCCCAGCCGATAGTGATGGAGGCACTGGACGAGGCTGAAGGGCTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496201.2
CDS GCA 90 bp CGCCTGCAGCAGGAAAGGGTCCAGGGCCTTTTCATGAAGCTCTTCTaGTTGGAGGACACGGGAGGCGCTGAGCAGGTACTCGCGGGCGGA +
Preference number: 5 (lower is better)
Translates to: RLQQERVQGLFMKLF*LEDTGGAEQVLAGG
Trigger: TCCGCCCGCGAGTACCTGCTCAGCGCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCATGAAAAGGCCCTGGACCCTTTCCTGCTGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS GCA 90 bp CAACTCTGCGCGGAGTCTCCGCAGTCGTCGCCCCCATGCCAAGGTTaGTTGGACAAGGAGGGCGGAGGAGTGGGAGCAGCGCATCCATTT +
Preference number: 5 (lower is better)
Translates to: QLCAESPQSSPPCQG*LDKEGGGVGAAHPF
Trigger: AAATGGATGCGCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTCCGCGCAGAGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 90 bp TCTGCGCGGAGTCTCCGCAGTCGTCGCCCCCATGCCAAGGTTGCTTaGACAAGGAGGGCGGAGGAGTGGGAGCAGCGCATCCATTTCATT +
Preference number: 5 (lower is better)
Translates to: SARSLRSRRPHAKVA*TRRAEEWEQRIHFI
Trigger: AATGAAATGGATGCGCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTCCGCGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CAA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCCAAAGCCCTCCTCGTaGCAGCCCGGAGTGCACATG +
Preference number: 5 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQPKPSS*QPGVHM
Trigger: CATGTGCACTCCGGGCTGCAACGAGGAGGGCTTTGG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCATGAAGCTCTTCTGCTaGGAGGACACGGGAGGCGCT +
Preference number: 5 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSMKLFC*EDTGGA
Trigger: AGCGCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCAT...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGCCCGTCATCTGCCTTTaGGGAGAAGTGCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQPVICL*GEVRVR
Trigger: CCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGG...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCACATCTGCCCCCTACCTaGCCAGTGCCTCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAHLPPT*PVPHRL
Trigger: CAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATG...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CCA 90 bp GAAAGGCCTCCACAGACAGGAGTTCTCAGGAGAACCCTGTACGGCTaGGAGCTCAGGGGTCGGGGAGGCCCTGTGTTCTGGATTCTTAGG +
Preference number: 5 (lower is better)
Translates to: ERPPQTGVLRRTLYG*ELRGRGGPVFWILR
Trigger: CCTAAGAATCCAGAACACAGGGCCTCCCCGACCCCTGAGCTCCCAGCCGTACAGGGTTCTCCTGAGAACTCCTGTCTGTGGAGGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477854.5
CDS-3UTR CAA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGTCCTCAGTCCCACTCTaGAGGGAGATGAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQSSVPL*REMSRS
Trigger: GCTGCGACTCATCTCCCTCAAGAGTGGGACTGAGGA...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACATCTGCCCCCTACCTaGCCAGTGCCTCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETHLPPT*PVPHRL
Trigger: CAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGGGGCACGCACCTGTTTaGGTTTTCTCGTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: GAGAHYPFLAEETQCPVQGHAPV*VFSWAP
Trigger: TGGTGCCCACGAGAAAACCAAAACAGGTGCGTGCCC...CTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 90 bp AGCCCCGGGACTCTTCTTCGCCTCTTGCTGTGCCTCGCCTGCGCCTaGGTGACTCGCCTCTATCTTAGTGCTGCAATTAGTGCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SPGTLLRLLLCLACA*VTRLYLSAAISAAS
Trigger: ACTTGCAGCACTAATTGCAGCACTAAGATAGAGGCGAGTCACGCAGGCGCAGGCGAGGCACAGCAAGAGGCGAAGAAGAGTCCCGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACACCCGTCATCTGCCTTTaGGGAGAAGTGCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETPVICL*GEVRVR
Trigger: CCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGG...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGCGTTGGCATGGATCTaGCCTTTGGTCCTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAALAWI*PLVLPQ
Trigger: TTGGGGCAGGACCAAAGGCAAGATCCATGCCAACGC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS TCA 90 bp AGACGAGGTTTGTGGCGTTCTGTGACCAGATGTGGCCATAACCGCTaGACCAGAGCACCCCACAGGCAAGCAGGAACTGTGAGGCAGCGA +
Preference number: 5 (lower is better)
Translates to: RRGLWRSVTRCGHNR*TRAPHRQAGTVRQR
Trigger: TCGCTGCCTCACAGTTCCTGCTTGCCTGTGGGGTGCTCTGGTTCAGCGGTTATGGCCACATCTGGTCACAGAACGCCACAAACCTCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000496201.2
CDS CCA 90 bp GCTGGGCAGTGCCCAGAGAACCTTGTAGGAGAAGCGCAGTCATTCTaGGGACTGGTGGGACAGCTGCTTTTCGTAGAGGCTCATGACGTG +
Preference number: 5 (lower is better)
Translates to: AGQCPENLVGEAQSF*GLVGQLLFVEAHDV
Trigger: CACGTCATGAGCCTCTACGAAAAGCAGCTGTCCCACCAGTCCCCAGAATGACTGCGCTTCTCCTACAAGGTTCTCTGGGCACTGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CCA 90 bp ACAATCCTGCCACAATCTTCCGTATTCTCCAGGCTGCTAGTGCGCTaGCCAGAGGTTTCCGGCATTCCATCCCCATGGGGGCTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: TILPQSSVFSRLLVR*PEVSGIPSPWGLEA
Trigger: AGCCTCAAGCCCCCATGGGGATGGAATGCCGGAAACCTCTGGCCAGCGCACTAGCAGCCTGGAGAATACGGAAGATTGTGGCAGGATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CAA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCATCTGCCCCCTACCTaGCCAGTGCCTCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGHLPPT*PVPHRL
Trigger: CAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATG...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGCGCTCCCCGCATGTaGCCAACACCTGCGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRGAPRM*PTPAQV
Trigger: CACTTGCGCAGGTGTTGGCAACATGCGGGGAGCGCC...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS TCA 90 bp TTTCAGGAGCGTCAGCAAAGAGGAGACGAGGTTTGTGGCGTTCTGTaGCCAGATGTGGCCATAACCGCTGAACCAGAGCACCCCACAGGC +
Preference number: 5 (lower is better)
Translates to: FQERQQRGDEVCGVL*PDVAITAEPEHPTG
Trigger: GCCTGTGGGGTGCTCTGGTTCAGCGGTTATGGCCACATCTGGTCACAGAACGCCACAAACCTCGTCTCCTCTTTGCTGACGCTCCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
ENST00000496201.2
CDS TCA 90 bp TCAAAGAATTCCGCCTGCAGCAGGAAAGGGTCCAGGGCCTTTTCATaGAGCTCTTCTGCTTGGAGGACACGGGAGGCGCTGAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SKNSACSRKGSRAFS*SSSAWRTREALSRY
Trigger: GTACCTGCTCAGCGCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCATGAAAAGGCCCTGGACCCTTTCCTGCTGCAGGCGGAATTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCAGGGTCAGCCTCAGGCTaGATGTCCATCACACAATCA +
Preference number: 5 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAGSASG*MSITQS
Trigger: TGATTGTGTGATGGACATCAAGCCTGAGGCTGACCC...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCCAAAGCCCTCCTCGTaGCAGCCCGGAGTGCACATG +
Preference number: 5 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRPKPSS*QPGVHM
Trigger: CATGTGCACTCCGGGCTGCAACGAGGAGGGCTTTGG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGCATCCCCATGGGGGCTaGAGGCTGTGGGCTGCACAC +
Preference number: 5 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTHPHGG*RLWAAH
Trigger: GTGTGCAGCCCACAGCCTCAAGCCCCCATGGGGATG...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CAA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGCCCCCATGCCAAGGTaGCTTGGACAAGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLAPMPR*LGQGGR
Trigger: CCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGC...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CAA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAAGACCCAAAGCCAGCTaGGTTTTGGGGGTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETRPKAS*VLGVGQ
Trigger: CTGACCAACCCCCAAAACCAAGCTGGCTTTGGGTCT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS TCA 90 bp CCGGGACTCTTCTTCGCCTCTTGCTGTGCCTCGCCTGCGCCTGCGTaGCTCGCCTCTATCTTAGTGCTGCAATTAGTGCTGCAAGTTTTA +
Preference number: 5 (lower is better)
Translates to: PGLFFASCCASPAPA*LASILVLQLVLQVL
Trigger: TAAAACTTGCAGCACTAATTGCAGCACTAAGATAGAGGCGAGTCACGCAGGCGCAGGCGAGGCACAGCAAGAGGCGAAGAAGAGTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAGGGTCAGCCTCAGGCTaGATGTCCATCACACAATCA +
Preference number: 5 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETGSASG*MSITQS
Trigger: TGATTGTGTGATGGACATCAAGCCTGAGGCTGACCC...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCCAAAGCCCTCCTCGTaGCAGCCCGGAGTGCACATG +
Preference number: 5 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEPKPSS*QPGVHM
Trigger: CATGTGCACTCCGGGCTGCAACGAGGAGGGCTTTGG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTATGAAGCTCTTCTGCTaGGAGGACACGGGAGGCGCT +
Preference number: 5 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGMKLFC*EDTGGA
Trigger: AGCGCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCAT...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATTGGGAAGTATGGTTTaGTACCGGTTCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: GAHYPFLAEETQCPVQRALGSMV*YRFFRT
Trigger: GGTGCGGAAGAACCGGTACAAAACCATACTTCCCAA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTTCCTCAGTCCCACTCTaGAGGGAGATGAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGSSVPL*REMSRS
Trigger: GCTGCGACTCATCTCCCTCAAGAGTGGGACTGAGGA...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCATCCTCAGTCCCACTCTaGAGGGAGATGAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSSSVPL*REMSRS
Trigger: GCTGCGACTCATCTCCCTCAAGAGTGGGACTGAGGA...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCATCTGCCCCCTACCTaGCCAGTGCCTCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLHLPPT*PVPHRL
Trigger: CAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCGGTTGGTCAGCAGCGTaGGCATGGATCTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: AHSNLENSPSAESSLVTFGWSAA*AWILPL
Trigger: CAAAGGCAAGATCCATGCCAACGCTGCTGACCAACC...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp GTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTGCTTGGTTTTGGGGGTaGGTCAGCAGCGTTGGCATG +
Preference number: 5 (lower is better)
Translates to: VLMEPSLKTGARGLRGVGAWFWG*VSSVGM
Trigger: CATGCCAACGCTGCTGACCAACCCCCAAAACCAAGC...ACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGCCCGTCATCTGCCTTTaGGGAGAAGTGCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEPVICL*GEVRVR
Trigger: CCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGG...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACATCTGCCCCCTACCTaGCCAGTGCCTCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETHLPPT*PVPHRL
Trigger: CAGCCTGTGAGGCACTGGCAAGGTAGGGGGCAGATG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp CCCCGTCATCTGCCTTTTGGGAGAAGTGCGGGTGAGGCCGAGGCAGGCAAGTCCAAAATGCTCCGTTTATaGCTCTATTCAATGACCACG +
Preference number: 5 (lower is better)
Translates to: PRHLPFGRSAGEAEAGKSKMLRL*LYSMTT
Trigger: CGTGGTCATTGAATAGAGCAATAAACGGAGCATTTT...GGACTTGCCTGCCTCGGCCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAACTCTTCTTCGCCTCTaGCTGTGCCTCGCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETTLLRL*LCLACA
Trigger: GGCGCAGGCGAGGCACAGCAAGAGGCGAAGAAGAGT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS GCA 90 bp TGGCTCCCTCATAATTCATTCCCAAGGTGTCTGGATGGGGAAGGGTaGCATCTTCCAGGGCAGGAAGCTTTCTCAGCAAAAAGCAAGCGG +
Preference number: 5 (lower is better)
Translates to: WLPHNSFPRCLDGEG*HLPGQEAFSAKSKR
Trigger: CCGCTTGCTTTTTGCTGAGAAAGCTTCCTGCCCTGGAAGATGGCACCCTTCCCCATCCAGACACCTTGGGAATGAATTATGAGGGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CAA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTATGAAGCTCTTCTGCTaGGAGGACACGGGAGGCGCT +
Preference number: 5 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLMKLFC*EDTGGA
Trigger: AGCGCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCAT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGTCCTCAGTCCCACTCTaGAGGGAGATGAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARSSVPL*REMSRS
Trigger: GCTGCGACTCATCTCCCTCAAGAGTGGGACTGAGGA...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACACCCGTCATCTGCCTTTaGGGAGAAGTGCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETPVICL*GEVRVR
Trigger: CCTCACCCGCACTTCTCCCAAAAGGCAGATGACGGG...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACCCATGCCAAGGTTGCTaGGACAAGGAGGGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHPCQGC*DKEGGG
Trigger: TCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGG...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS-3UTR CAA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCACCAACATGGTGGTATTaGAAGGGAGGGCCTTTGCGA +
Preference number: 5 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSPTWWY*KGGPLR
Trigger: TCGCAAAGGCCCTCCCTTCAAATACCACCATGTTGG...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS GCA 90 bp TGGCTCCCTCATAATTCATTCCCAAGGTGTCTGGATGGGGAAGGGTaGCATCTTCCAGGGCAGGAAGCTTTCTCAGCAAAAAGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: WLPHNSFPRCLDGEG*HLPGQEAFSAKSKL
Trigger: CAGCTTGCTTTTTGCTGAGAAAGCTTCCTGCCCTGGAAGATGGCACCCTTCCCCATCCAGACACCTTGGGAATGAATTATGAGGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358540.7
CDS-3UTR CAA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTAAGAGGAGACGAGGTTaGTGGCGTTCTGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRKRRRG*WRSVTR
Trigger: TCTGGTCACAGAACGCCACAAACCTCGTCTCCTCTT...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CAA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACATGAAGCTCTTCTGCTaGGAGGACACGGGAGGCGCT +
Preference number: 5 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHMKLFC*EDTGGA
Trigger: AGCGCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCAT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GGAGCTCATTACCCCTTCCTGGCTGAGGAGACACAGTGTCCGGTACAGAGGGCATTCATCTCCTCGATGTaGGTGATCATGACAATGATG +
Preference number: 5 (lower is better)
Translates to: GAHYPFLAEETQCPVQRAFISSM*VIMTMM
Trigger: CATCATTGTCATGATCACCAACATCGAGGAGATGAA...TGCCCTCTGTACCGGACACTGTGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTCACGGTGCCTTGATCTaGGACTTCCCAGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLHGALI*DFPVSR
Trigger: TCTGGAGACTGGGAAGTCCAAGATCAAGGCACCGTG...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGAAAGCCAGCTTGGTTTaGGGGGTTGGTCAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEKASLV*GVGQQR
Trigger: ACGCTGCTGACCAACCCCCAAAACCAAGCTGGCTTT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS TCA 90 bp GTAGTTGGCATTGATGTAGGAACTCAGAGGGTCGTCAGGGTCTGGTaGGGTCAGACACACTCTGCTGTGAGGGTTGGGAAGTATGGTTTT +
Preference number: 5 (lower is better)
Translates to: VVGIDVGTQRVVRVW*GQTHSAVRVGKYGF
Trigger: AAAACCATACTTCCCAACCCTCACAGCAGAGTGTGTCTGACCTCACCAGACCCTGACGACCCTCTGAGTTCCTACATCAATGCCAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS TCA 90 bp TGCAAGTTTTACCACCTCTTCACACTCCCCGCTTCACTGCCACCTTaGCCTTTATCATTGCTCGAGTGTGGGAGATTTCTGCCTCATCCC +
Preference number: 5 (lower is better)
Translates to: CKFYHLFTLPASLPP*PLSLLECGRFLPHP
Trigger: GGGATGAGGCAGAAATCTCCCACACTCGAGCAATGATAAAGGTCAAGGTGGCAGTGAAGCGGGGAGTGTGAAGAGGTGGTAAAACTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAGAGGAGACGAGGTTaGTGGCGTTCTGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARKRRRG*WRSVTR
Trigger: TCTGGTCACAGAACGCCACAAACCTCGTCTCCTCTT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACACGAAGAGGAGACGAGGTTaGTGGCGTTCTGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: NTCCQRVMHALLMGSQHTKRRRG*WRSVTR
Trigger: TCTGGTCACAGAACGCCACAAACCTCGTCTCCTCTT...CGTGTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
CDS-3UTR CAA 90 bp CTGGATCAGGTATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTCGCTTCACTGCCACCTaGACCTTTATCATTGCTCGA +
Preference number: 5 (lower is better)
Translates to: LDQVLMEPSLKTGARGLRRFTAT*TFIIAR
Trigger: TCGAGCAATGATAAAGGTCAAGGTGGCAGTGAAGCG...ACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAATACCTGATCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGCATGGATCTTGCCTTaGGTCCTGCCCCAACAACTT +
Preference number: 5 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLAWILP*VLPQQL
Trigger: AAGTTGTTGGGGCAGGACCAAAGGCAAGATCCATGC...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGTTGGGAAGTATGGTTTaGTACCGGTTCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARLGSMV*YRFFRT
Trigger: GGTGCGGAAGAACCGGTACAAAACCATACTTCCCAA...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS GCA 90 bp ATTAGTGCTGCAAGTTTTACCACCTCTTCACACTCCCCGCTTCACTaGCACCTTGACCTTTATCATTGCTCGAGTGTGGGAGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: ISAASFTTSSHSPLH*HLDLYHCSSVGDFC
Trigger: GCAGAAATCTCCCACACTCGAGCAATGATAAAGGTCAAGGTGGCAGTGAAGCGGGGAGTGTGAAGAGGTGGTAAAACTTGCAGCACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACATTGGGAAGTATGGTTTaGTACCGGTTCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETLGSMV*YRFFRT
Trigger: GGTGCGGAAGAACCGGTACAAAACCATACTTCCCAA...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp AAGTCCGGTTGCTTAGGGGCTGGAGCTCATTACCCCTTCCTGGCTGAGGAGACAATTCTGGATCAGGTATaGATGGAACCATCGTTAAAA +
Preference number: 5 (lower is better)
Translates to: KSGCLGAGAHYPFLAEETILDQV*MEPSLK
Trigger: TTTTAACGATGGTTCCATCAATACCTGATCCAGAAT...TGTCTCCTCAGCCAGGAAGGGGTAATGAGCTCCAGCCCCTAAGCAACCGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GCCCACTCCAACCTAGAGAACTCTCCCTCAGCTGAAAGCTCTCTGGTGACCTTCAAAATGCTCCGTTTATaGCTCTATTCAATGACCACG +
Preference number: 5 (lower is better)
Translates to: AHSNLENSPSAESSLVTFKMLRL*LYSMTT
Trigger: CGTGGTCATTGAATAGAGCAATAAACGGAGCATTTT...GAAGGTCACCAGAGAGCTTTCAGCTGAGGGAGAGTTCTCTAGGTTGGAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS TCA 90 bp CTGTGGCTTTGGACTGAATGTGTGTGTCCCCTTAAGTTCACATGTTaGAACCAAATCCCAACATGGTGGTATTTGAAGGGAGGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LWLWTECVCPLKFTC*NQIPTWWYLKGGPL
Trigger: CAAAGGCCCTCCCTTCAAATACCACCATGTTGGGATTTGGTTTCAACATGTGAACTTAAGGGGACACACACATTCAGTCCAAAGCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS-3UTR CAA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGTTCATCTCCTCGATGTaGGTGATCATGACAATGATG +
Preference number: 5 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARFISSM*VIMTMM
Trigger: CATCATTGTCATGATCACCAACATCGAGGAGATGAA...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp ATTGATGGAACCATCGTTAAAAACTGGAGCCCGGGGTCTGCGTGGTGTGGGTCAATTCTGGATCAGGTATaGATGGAACCATCGTTAAAA +
Preference number: 5 (lower is better)
Translates to: IDGTIVKNWSPGSAWCGSILDQV*MEPSLK
Trigger: TTTTAACGATGGTTCCATCAATACCTGATCCAGAAT...TGACCCACACCACGCAGACCCCGGGCTCCAGTTTTTAACGATGGTTCCATCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACATTCATCTCCTCGATGTaGGTGATCATGACAATGATG +
Preference number: 5 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETFISSM*VIMTMM
Trigger: CATCATTGTCATGATCACCAACATCGAGGAGATGAA...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GTGACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTAAAATGCTCCGTTTATaGCTCTATTCAATGACCACG +
Preference number: 5 (lower is better)
Translates to: VTQKNVSRRSGLSPHPNLKMLRL*LYSMTT
Trigger: CGTGGTCATTGAATAGAGCAATAAACGGAGCATTTT...AAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp AGAGATGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGATTCTGGATCAGGTATaGATGGAACCATCGTTAAAA +
Preference number: 5 (lower is better)
Translates to: RDGWTDRTHCSRTQSVARILDQV*MEPSLK
Trigger: TTTTAACGATGGTTCCATCAATACCTGATCCAGAAT...CCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp ACACAGAAAAATGTCTCACGTAGATCTGGGCTGAGTCCCCACCCAAACCTTGAGATTCTGGATCAGGTATaGATGGAACCATCGTTAAAA +
Preference number: 5 (lower is better)
Translates to: TQKNVSRRSGLSPHPNLEILDQV*MEPSLK
Trigger: TTTTAACGATGGTTCCATCAATACCTGATCCAGAAT...CTCAAGGTTTGGGTGGGGACTCAGCCCAGATCTACGTGAGACATTTTTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp GATAATACATGTTGCCAAAGAGTCATGCATGCCCTCCTGATGGGCTCTCAACACAAAATGCTCCGTTTATaGCTCTATTCAATGACCACG +
Preference number: 5 (lower is better)
Translates to: DNTCCQRVMHALLMGSQHKMLRL*LYSMTT
Trigger: CGTGGTCATTGAATAGAGCAATAAACGGAGCATTTT...GTGTTGAGAGCCCATCAGGAGGGCATGCATGACTCTTTGGCAACATGTATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS-3UTR CAA 90 bp TGGATGGACAGACAGAACACATTGCAGCAGGACACAAAGTGTAGCACGGAAACAAAAATGCTCCGTTTATaGCTCTATTCAATGACCACG +
Preference number: 5 (lower is better)
Translates to: WMDRQNTLQQDTKCSTETKMLRL*LYSMTT
Trigger: CGTGGTCATTGAATAGAGCAATAAACGGAGCATTTT...TGTTTCCGTGCTACACTTTGTGTCCTGCTGCAATGTGTTCTGTCTGTCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS GCA 72 bp TGGGAGCCCCGGGTCGGGCCGCGCGGCTACGGCAACTaGCAGAGGGACCCCGGCAGGGCCGTGCGCGCTGAA +
Preference number: 6 (lower is better)
Translates to: WEPRVGPRGYGN*QRDPGRAVRAE
Trigger: TTCAGCGCGCACGGCCCTGCCGGGGTCCCTCTGGCAGTTGCCGTAGCCGCGCGGCCCGACCCGGGGCTCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 72 bp CGTCCTTCGGTGCCTCCGTCCTTCGGTCCGTCCGCCTaGCGCTCCGTCCCGCGCTCCGTGCGCGCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: RPSVPPSFGPSA*RSVPRSVRAPS
Trigger: CGAGGGAGCGCGCACGGAGCGCGGGACGGAGCGCCAGGCGGACGGACCGAAGGACGGAGGCACCGAAGGACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS GCA 72 bp TGTGCGTCTGCGTGTGCGGGGGCGTCCGTCCTTCGGTaGCTCCGTCCTTCGGTCCGTCCGCCTGGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: CASACAGASVLR*LRPSVRPPGAP
Trigger: CGGAGCGCCAGGCGGACGGACCGAAGGACGGAGGCACCGAAGGACGGACGCCCCCGCACACGCAGACGCACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS GCA 72 bp TGTATGCGACGGGGGCCGCGCCGAGCTCTGTGCGTCTaGGTGTGCGGGGGCGTCCGTCCTTCGGTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: CMRRGPRRALCV*VCGGVRPSVPP
Trigger: CGGAGGCACCGAAGGACGGACGCCCCCGCACACGCAGACGCACAGAGCTCGGCGCGGCCCCCGTCGCATACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS GCA 72 bp CCAGTGTGTATGCGACGGGGGCCGCGCCGAGCTCTGTaGGTCTGCGTGTGCGGGGGCGTCCGTCCTTCGGTG +
Preference number: 6 (lower is better)
Translates to: PVCMRRGPRRAL*VCVCGGVRPSV
Trigger: CACCGAAGGACGGACGCCCCCGCACACGCAGACGCACAGAGCTCGGCGCGGCCCCCGTCGCATACACACTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358540.7
ENST00000396170.5
CDS GCA 72 bp TCCGTGCGCGCTCCCTCGCCCGACCGCCTCACCAAATaGGCTTCAGCTGCAGAGTCGCTGGCGCAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SVRAPSPDRLTK*ASAAESLAQPP
Trigger: CGGCGGCTGCGCCAGCGACTCTGCAGCTGAAGCGCATTTGGTGAGGCGGTCGGGCGAGGGAGCGCGCACGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 72 bp GCTACGGCAACTGCCAGAGGGACCCCGGCAGGGCCGTaGGCGCTGAACCTGGGACGGGACAGACAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: ATATARGTPAGP*ALNLGRDRQAD
Trigger: GTCTGCCTGTCTGTCCCGTCCCAGGTTCAGCGCGCACGGCCCTGCCGGGGTCCCTCTGGCAGTTGCCGTAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 72 bp AAGGTCCAGACCGGGCAGCTGAGAGCAGGGCCCCGGTaGTGCGTGCCCGGGGAGGCCTCAGGACTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: KVQTGQLRAGPR*CVPGEASGLSL
Trigger: CAAGGAGAGTCCTGAGGCCTCCCCGGGCACGCAGCACCGGGGCCCTGCTCTCAGCTGCCCGGTCTGGACCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477854.5
CDS GCA 72 bp TCCCTCGCCCGACCGCCTCACCAAATGCGCTTCAGCTaGAGAGTCGCTGGCGCAGCCGCCGGGTGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: SLARPPHQMRFS*RVAGAAAGWVW
Trigger: CCAAACCCACCCGGCGGCTGCGCCAGCGACTCTGCAGCTGAAGCGCATTTGGTGAGGCGGTCGGGCGAGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 72 bp GCGGAGTCTCCGCAGTCGTCGCCCCCATGCCAAGGTTaGTTGGACAAGGAGGGCGGAGGAGTGGGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: AESPQSSPPCQG*LDKEGGGVGAA
Trigger: CGCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 72 bp ATCCCTGCACTGCAGTGGACGATGATGGGGGCACAGTaGGGCCCCTCCTGCTGGGCTGCCTCCTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: IPALQWTMMGAQ*GPSCWAASSTS
Trigger: GGAGGTGGAGGAGGCAGCCCAGCAGGAGGGGCCCCACTGTGCCCCCATCATCGTCCACTGCAGTGCAGGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CAA 72 bp CGCGGAGTCTCCGCAGTCGTCGCCCCCATGCCAAGGTaGCTTGGACAAGGAGGGCGGAGGAGTGGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RGVSAVVAPMPR*LGQGGRRSGSS
Trigger: GCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTCCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 72 bp TCTCGTGGGCACCAGGGGCCCGGACGAGCAGGGAGCTaGCCATGTGCCCCACAATCCTGCCACAATCTTCCG +
Preference number: 6 (lower is better)
Translates to: SRGHQGPGRAGS*PCAPQSCHNLP
Trigger: CGGAAGATTGTGGCAGGATTGTGGGGCACATGGGCAGCTCCCTGCTCGTCCGGGCCCCTGGTGCCCACGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 72 bp ATGTCCAGGGCCCCTCCCTCGGAGTCATCAGCAGCGTaGTTCTCTCTCTCACTCCGGCCAGAGCGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: MSRAPPSESSAA*FSLSLRPERAP
Trigger: CGGAGCCCGCTCTGGCCGGAGTGAGAGAGAGAACCACGCTGCTGATGACTCCGAGGGAGGGGCCCTGGACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396168.1
CDS CCA 72 bp GTGCGCTGGCCAGAGGTTTCCGGCATTCCATCCCCATaGGGGCTTGAGGCTGTGGGCTGCACACAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: VRWPEVSGIPSP*GLEAVGCTQGR
Trigger: CCTGCCCTGTGTGCAGCCCACAGCCTCAAGCCCCCATGGGGATGGAATGCCGGAAACCTCTGGCCAGCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS TCA 72 bp GCAGGTACTCGCGGGCGGACTCCTCACGTGGGGACATaGGATAGCCAAAGCCCTCCTCGTTGCAGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: AGTRGRTPHVGT*DSQSPPRCSPE
Trigger: CTCCGGGCTGCAACGAGGAGGGCTTTGGCTATCTCATGTCCCCACGTGAGGAGTCCGCCCGCGAGTACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS GCA 72 bp CAACTCTGCGCGGAGTCTCCGCAGTCGTCGCCCCCATaGCAAGGTTGCTTGGACAAGGAGGGCGGAGGAGTG +
Preference number: 6 (lower is better)
Translates to: QLCAESPQSSPP*QGCLDKEGGGV
Trigger: CACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTCCGCGCAGAGTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 72 bp GGATCATGCCGCCCCTGTCCTGACGGAGCTGGCACGTaGTCTTCAGGATGTCCACCACACCCTCCTGCCGCA +
Preference number: 6 (lower is better)
Translates to: GSCRPCPDGAGT*SSGCPPHPPAA
Trigger: TGCGGCAGGAGGGTGTGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTCAGGACAGGGGCGGCATGATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CCA 72 bp AGTCTCCGCAGTCGTCGCCCCCATGCCAAGGTTGCTTaGACAAGGAGGGCGGAGGAGTGGGAGCAGCGCATC +
Preference number: 6 (lower is better)
Translates to: SLRSRRPHAKVA*TRRAEEWEQRI
Trigger: GATGCGCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CCA 72 bp CGGCCCTGTCCACAGGCAGGGCTCTGCCACCCCTTTTaGGGTGGCTGTGGCTGCCTCTCAATCTGGGATCAG +
Preference number: 6 (lower is better)
Translates to: RPCPQAGLCHPF*GGCGCLSIWDQ
Trigger: CTGATCCCAGATTGAGAGGCAGCCACAGCCACCCCAAAAGGGGTGGCAGAGCCCTGCCTGTGGACAGGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496201.2
CDS CCA 72 bp CCTTCAGCCTCGTCCAGTGCCTCCATCACTATCGGCTaGGGGAGACCTGTGGAAGATGGGCCATGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: PSASSSASITIG*GRPVEDGPCGP
Trigger: CGGCCCGCATGGCCCATCTTCCACAGGTCTCCCCCAGCCGATAGTGATGGAGGCACTGGACGAGGCTGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496201.2
CDS CAA 72 bp GAGTCTCCGCAGTCGTCGCCCCCATGCCAAGGTTGCTaGGACAAGGAGGGCGGAGGAGTGGGAGCAGCGCAT +
Preference number: 6 (lower is better)
Translates to: ESPQSSPPCQGC*DKEGGGVGAAH
Trigger: ATGCGCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CAA 90 bp GCAACTCTGCGCGGAGTCTCCGCAGTCGTCGCCCCCATGCCAAGGTaGCTTGGACAAGGAGGGCGGAGGAGTGGGAGCAGCGCATCCATT +
Preference number: 6 (lower is better)
Translates to: ATLRGVSAVVAPMPR*LGQGGRRSGSSASI
Trigger: AATGGATGCGCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTCCGCGCAGAGTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 72 bp TCACTATCGGCTGGGGGAGACCCGGTAGCCTCTCACTaGAGCACATGTCCAGGGCCCCTCCCTCGGAGTCAT +
Preference number: 6 (lower is better)
Translates to: SLSAGGDPVASH*STCPGPLPRSH
Trigger: ATGACTCCGAGGGAGGGGCCCTGGACATGTGCTGCAGTGAGAGGCTACCGGGTCTCCCCCAGCCGATAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
CDS CCA 72 bp GGCGCTGAGCAGGTACTCGCGGGCGGACTCCTCACGTaGGGACATGAGATAGCCAAAGCCCTCCTCGTTGCA +
Preference number: 6 (lower is better)
Translates to: GAEQVLAGGLLT*GHEIAKALLVA
Trigger: TGCAACGAGGAGGGCTTTGGCTATCTCATGTCCCCACGTGAGGAGTCCGCCCGCGAGTACCTGCTCAGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CCA 72 bp GTGGCGCTCCCCGCATGTTGCCAACACCTGCGCAAGTaGAGCGGCCCCATACTAGGGCGCATGCAATACCAG +
Preference number: 6 (lower is better)
Translates to: VALPACCQHLRK*SGPILGRMQYQ
Trigger: CTGGTATTGCATGCGCCCTAGTATGGGGCCGCTCCACTTGCGCAGGTGTTGGCAACATGCGGGGAGCGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CAA 90 bp CTCTGCGCGGAGTCTCCGCAGTCGTCGCCCCCATGCCAAGGTTGCTaGGACAAGGAGGGCGGAGGAGTGGGAGCAGCGCATCCATTTCAT +
Preference number: 6 (lower is better)
Translates to: LCAESPQSSPPCQGC*DKEGGGVGAAHPFH
Trigger: ATGAAATGGATGCGCTGCTCCCACTCCTCCGCCCTCCTTGTCCAAGCAACCTTGGCATGGGGGCGACGACTGCGGAGACTCCGCGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS CAA 90 bp CTGCAGCAGGAAAGGGTCCAGGGCCTTTTCATGAAGCTCTTCTGCTaGGAGGACACGGGAGGCGCTGAGCAGGTACTCGCGGGCGGACTC +
Preference number: 6 (lower is better)
Translates to: LQQERVQGLFMKLFC*EDTGGAEQVLAGGL
Trigger: GAGTCCGCCCGCGAGTACCTGCTCAGCGCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCATGAAAAGGCCCTGGACCCTTTCCTGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS GCA 72 bp CCCGGGACTCTTCTTCGCCTCTTGCTGTGCCTCGCCTaGGCCTGCGTGACTCGCCTCTATCTTAGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: PGTLLRLLLCLA*ACVTRLYLSAA
Trigger: TGCAGCACTAAGATAGAGGCGAGTCACGCAGGCGCAGGCGAGGCACAGCAAGAGGCGAAGAAGAGTCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CCA 72 bp CCACAATCTTCCGTATTCTCCAGGCTGCTAGTGCGCTaGCCAGAGGTTTCCGGCATTCCATCCCCATGGGGG +
Preference number: 6 (lower is better)
Translates to: PQSSVFSRLLVR*PEVSGIPSPWG
Trigger: CCCCCATGGGGATGGAATGCCGGAAACCTCTGGCCAGCGCACTAGCAGCCTGGAGAATACGGAAGATTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396170.5
CDS GCA 72 bp CAGGAAAGGGTCCAGGGCCTTTTCATGAAGCTCTTCTaGTTGGAGGACACGGGAGGCGCTGAGCAGGTACTC +
Preference number: 6 (lower is better)
Translates to: QERVQGLFMKLF*LEDTGGAEQVL
Trigger: GAGTACCTGCTCAGCGCCTCCCGTGTCCTCCAAGCAGAAGAGCTTCATGAAAAGGCCCTGGACCCTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CAA 90 bp ACATTGCCCAGTGGCACCAGACACAGACCCAAAGCCAGCTTGGTTTaGGGGGTTGGTCAGCAGCGTTGGCATGGATCTTGCCTTTGGTCC +
Preference number: 6 (lower is better)
Translates to: TLPSGTRHRPKASLV*GVGQQRWHGSCLWS
Trigger: GGACCAAAGGCAAGATCCATGCCAACGCTGCTGACCAACCCCCAAAACCAAGCTGGCTTTGGGTCTGTGTCTGGTGCCACTGGGCAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS TCA 72 bp TCTCCTCCCCACCATAGCCCCGGATGTAGTTGGCATTaGTGTAGGAACTCAGAGGGTCGTCAGGGTCTGGTG +
Preference number: 6 (lower is better)
Translates to: SPPHHSPGCSWH*CRNSEGRQGLV
Trigger: CACCAGACCCTGACGACCCTCTGAGTTCCTACATCAATGCCAACTACATCCGGGGCTATGGTGGGGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS TCA 72 bp AAAAGGAGCTTTCACTCCTTCTGCCACGTGAGGACATaGCCCTGGAAGTGGGTCCTCACCAGGGTCACGGTG +
Preference number: 6 (lower is better)
Translates to: KRSFHSFCHVRT*PWKWVLTRVTV
Trigger: CACCGTGACCCTGGTGAGGACCCACTTCCAGGGTCATGTCCTCACGTGGCAGAAGGAGTGAAAGCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS GCA 72 bp GGTCAGCAGCGTTGGCATGGATCTTGCCTTTGGTCCTaGCCCAACAACTTCAGGATCATCCAAGAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: GQQRWHGSCLWS*PNNFRIIQEGP
Trigger: TGGCCCCTCTTGGATGATCCTGAAGTTGTTGGGGCAGGACCAAAGGCAAGATCCATGCCAACGCTGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CAA 72 bp AGTGGCACCAGACACAGACCCAAAGCCAGCTTGGTTTaGGGGGTTGGTCAGCAGCGTTGGCATGGATCTTGC +
Preference number: 6 (lower is better)
Translates to: SGTRHRPKASLV*GVGQQRWHGSC
Trigger: GCAAGATCCATGCCAACGCTGCTGACCAACCCCCAAAACCAAGCTGGCTTTGGGTCTGTGTCTGGTGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS TCA 72 bp CGTCAGCAAAGAGGAGACGAGGTTTGTGGCGTTCTGTaGCCAGATGTGGCCATAACCGCTGAACCAGAGCAC +
Preference number: 6 (lower is better)
Translates to: RQQRGDEVCGVL*PDVAITAEPEH
Trigger: GTGCTCTGGTTCAGCGGTTATGGCCACATCTGGTCACAGAACGCCACAAACCTCGTCTCCTCTTTGCTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
ENST00000496201.2
CDS TCA 72 bp GCTCTTACAAAAGGAGCTTTCACTCCTTCTGCCACGTaGGGACATGACCCTGGAAGTGGGTCCTCACCAGGG +
Preference number: 6 (lower is better)
Translates to: ALTKGAFTPSAT*GHDPGSGSSPG
Trigger: CCCTGGTGAGGACCCACTTCCAGGGTCATGTCCTCACGTGGCAGAAGGAGTGAAAGCTCCTTTTGTAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS GCA 72 bp GAGGGTCGTCAGGGTCTGGTGAGGTCAGACACACTCTaGTGTGAGGGTTGGGAAGTATGGTTTTGTACCGGT +
Preference number: 6 (lower is better)
Translates to: EGRQGLVRSDTL*CEGWEVWFCTG
Trigger: ACCGGTACAAAACCATACTTCCCAACCCTCACAGCAGAGTGTGTCTGACCTCACCAGACCCTGACGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS GCA 72 bp TTCTGCACAGTGATCTCAACACCGTCGTACGCCACCTaGTCCTCCGGCCAATACTCGGTGCATTTCTCGTTC +
Preference number: 6 (lower is better)
Translates to: FCTVISTPSYAT*SSGQYSVHFSF
Trigger: GAACGAGAAATGCACCGAGTATTGGCCGGAGGAGCAGGTGGCGTACGACGGTGTTGAGATCACTGTGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CCA 72 bp TGCCCAGAGAACCTTGTAGGAGAAGCGCAGTCATTCTaGGGACTGGTGGGACAGCTGCTTTTCGTAGAGGCT +
Preference number: 6 (lower is better)
Translates to: CPENLVGEAQSF*GLVGQLLFVEA
Trigger: AGCCTCTACGAAAAGCAGCTGTCCCACCAGTCCCCAGAATGACTGCGCTTCTCCTACAAGGTTCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396166.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CCA 72 bp GGGGTTGGTCAGCAGCGTTGGCATGGATCTTGCCTTTaGTCCTGCCCCAACAACTTCAGGATCATCCAAGAG +
Preference number: 6 (lower is better)
Translates to: GVGQQRWHGSCL*SCPNNFRIIQE
Trigger: CTCTTGGATGATCCTGAAGTTGTTGGGGCAGGACCAAAGGCAAGATCCATGCCAACGCTGCTGACCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CCA 72 bp CAGACACAGACCCAAAGCCAGCTTGGTTTTGGGGGTTaGTCAGCAGCGTTGGCATGGATCTTGCCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: QTQTQSQLGFGG*SAALAWILPLV
Trigger: GACCAAAGGCAAGATCCATGCCAACGCTGCTGACCAACCCCCAAAACCAAGCTGGCTTTGGGTCTGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CAA 72 bp GCTGTTTCAGGAGCGTCAGCAAAGAGGAGACGAGGTTaGTGGCGTTCTGTGACCAGATGTGGCCATAACCGC +
Preference number: 6 (lower is better)
Translates to: AVSGASAKRRRG*WRSVTRCGHNR
Trigger: GCGGTTATGGCCACATCTGGTCACAGAACGCCACAAACCTCGTCTCCTCTTTGCTGACGCTCCTGAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000477854.5
ENST00000496201.2
CDS CAA 72 bp GGGGGTTGGTCAGCAGCGTTGGCATGGATCTTGCCTTaGGTCCTGCCCCAACAACTTCAGGATCATCCAAGA +
Preference number: 6 (lower is better)
Translates to: GGWSAALAWILP*VLPQQLQDHPR
Trigger: TCTTGGATGATCCTGAAGTTGTTGGGGCAGGACCAAAGGCAAGATCCATGCCAACGCTGCTGACCAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CAA 72 bp CCAGACACAGACCCAAAGCCAGCTTGGTTTTGGGGGTaGGTCAGCAGCGTTGGCATGGATCTTGCCTTTGGT +
Preference number: 6 (lower is better)
Translates to: PDTDPKPAWFWG*VSSVGMDLAFG
Trigger: ACCAAAGGCAAGATCCATGCCAACGCTGCTGACCAACCCCCAAAACCAAGCTGGCTTTGGGTCTGTGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS TCA 72 bp ATTGATGTAGGAACTCAGAGGGTCGTCAGGGTCTGGTaGGGTCAGACACACTCTGCTGTGAGGGTTGGGAAG +
Preference number: 6 (lower is better)
Translates to: IDVGTQRVVRVW*GQTHSAVRVGK
Trigger: CTTCCCAACCCTCACAGCAGAGTGTGTCTGACCTCACCAGACCCTGACGACCCTCTGAGTTCCTACATCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS CAA 72 bp GACTTGACGGTGAGTGAGGTGGGGTCAGCCTCAGGCTaGATGTCCATCACACAATCAAACACAGGAGTCTCG +
Preference number: 6 (lower is better)
Translates to: DLTVSEVGSASG*MSITQSNTGVS
Trigger: CGAGACTCCTGTGTTTGATTGTGTGATGGACATCAAGCCTGAGGCTGACCCCACCTCACTCACCGTCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
ENST00000496201.2
CDS CAA 90 bp CTGCAAGTTTTACCACCTCTTCACACTCCCCGCTTCACTGCCACCTaGACCTTTATCATTGCTCGAGTGTGGGAGATTTCTGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: LQVLPPLHTPRFTAT*TFIIARVWEISASS
Trigger: GGATGAGGCAGAAATCTCCCACACTCGAGCAATGATAAAGGTCAAGGTGGCAGTGAAGCGGGGAGTGTGAAGAGGTGGTAAAACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS GCA 72 bp GCAAGTTTTACCACCTCTTCACACTCCCCGCTTCACTaGCACCTTGACCTTTATCATTGCTCGAGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: ASFTTSSHSPLH*HLDLYHCSSVG
Trigger: TCCCACACTCGAGCAATGATAAAGGTCAAGGTGGCAGTGAAGCGGGGAGTGTGAAGAGGTGGTAAAACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CAA 72 bp CAAATCCCAACATGGTGGTATTTGAAGGGAGGGCCTTaGCGAGGTGATGAAGTCATGAGAACGGAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: QIPTWWYLKGGP*RGDEVMRTEPS
Trigger: TGAGGGCTCCGTTCTCATGACTTCATCACCTCGCAAAGGCCCTCCCTTCAAATACCACCATGTTGGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CCA 72 bp CACATCTGGACATGCTGCTCTCCTGCTGAAAACCTGTaGCTTTGGACTGAATGTGTGTGTCCCCTTAAGTTC +
Preference number: 6 (lower is better)
Translates to: HIWTCCSPAENL*LWTECVCPLKF
Trigger: GAACTTAAGGGGACACACACATTCAGTCCAAAGCCACAGGTTTTCAGCAGGAGAGCAGCATGTCCAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CAA 72 bp CAATACTCGGTGCATTTCTCGTTCATCTCCTCGATGTaGGTGATCATGACAATGATGGGCGTGTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: QYSVHFSFISSM*VIMTMMGVCSC
Trigger: GCAGGAGCACACGCCCATCATTGTCATGATCACCAACATCGAGGAGATGAACGAGAAATGCACCGAGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358540.7
ENST00000396168.1
ENST00000396170.5
ENST00000477854.5
CDS GCA 72 bp CTTGACCTTTATCATTGCTCGAGTGTGGGAGATTTCTaGCTCATCCCCAACTGTCTCAGATCCACAGAGTCA +
Preference number: 6 (lower is better)
Translates to: LDLYHCSSVGDF*LIPNCLRSTES
Trigger: TGACTCTGTGGATCTGAGACAGTTGGGGATGAGGCAGAAATCTCCCACACTCGAGCAATGATAAAGGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CCA 72 bp TGGACATGCTGCTCTCCTGCTGAAAACCTGTGGCTTTaGACTGAATGTGTGTGTCCCCTTAAGTTCACATGT +
Preference number: 6 (lower is better)
Translates to: WTCCSPAENLWL*TECVCPLKFTC
Trigger: ACATGTGAACTTAAGGGGACACACACATTCAGTCCAAAGCCACAGGTTTTCAGCAGGAGAGCAGCATGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS CCA 72 bp TTCACTGCCACCTTGACCTTTATCATTGCTCGAGTGTaGGAGATTTCTGCCTCATCCCCAACTGTCTCAGAT +
Preference number: 6 (lower is better)
Translates to: FTATLTFIIARV*EISASSPTVSD
Trigger: ATCTGAGACAGTTGGGGATGAGGCAGAAATCTCCCACACTCGAGCAATGATAAAGGTCAAGGTGGCAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS GCA 72 bp AGTCAAAATAGTCTGTGTACAACACACATCTGGACATaGTGCTCTCCTGCTGAAAACCTGTGGCTTTGGACT +
Preference number: 6 (lower is better)
Translates to: SQNSLCTTHIWT*CSPAENLWLWT
Trigger: AGTCCAAAGCCACAGGTTTTCAGCAGGAGAGCAGCATGTCCAGATGTGTGTTGTACACAGACTATTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396166.7
CDS TCA 72 bp TGGACTGAATGTGTGTGTCCCCTTAAGTTCACATGTTaGAACCAAATCCCAACATGGTGGTATTTGAAGGGA +
Preference number: 6 (lower is better)
Translates to: WTECVCPLKFTC*NQIPTWWYLKG
Trigger: TCCCTTCAAATACCACCATGTTGGGATTTGGTTTCAACATGTGAACTTAAGGGGACACACACATTCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396166.7