RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000070159

Ensembl transcript IDs: ENST00000262539.7, ENST00000374541.4, ENST00000412145.5, ENST00000446349.5, ENST00000497739.1

Found 1193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGTCGCTGGGAGATGGGACAAAGGGAGGGAGGGCAGAGAGGTGTTaGTCAGCCTTCAGCCTGACCCCCAGTGCCCTGCCATCTAGTACA +
Preference number: 1 (lower is better)
Translates to: KSLGDGTKGGRAERC*SAFSLTPSALPSST
Trigger: TGTACTAGATGGCAGGGCACTGGGGGTCAGGCTGAAGGCTGAGCAACACCTCTCTGCCCTCCCTCCCTTTGTCCCATCTCCCAGCGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 90 bp GGACAAAGGGAGGGAGGGCAGAGAGGTGTTGCTCAGCCTTCAGCCTaGCCCCCAGTGCCCTGCCATCTAGTACATACGTCAGGGTTTCCT +
Preference number: 1 (lower is better)
Translates to: GQREGGQRGVAQPSA*PPVPCHLVHTSGFP
Trigger: AGGAAACCCTGACGTATGTACTAGATGGCAGGGCACTGGGGGTCAGGCTGAAGGCTGAGCAACACCTCTCTGCCCTCCCTCCCTTTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 90 bp TGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTaGGGTCACAGAATCTTTGCCACCTTTACCGAGACTGCTCTCAGC +
Preference number: 1 (lower is better)
Translates to: WPSPAIRLPSIWSPV*GHRIFATFTETALS
Trigger: GCTGAGAGCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp CTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTaGTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAG +
Preference number: 1 (lower is better)
Translates to: LVAGRTTALWVSGLN*SRMPTGVCVVMLGK
Trigger: CTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp GTCCCCGGTCTGAGGTCACAGAATCTTTGCCACCTTTACCGAGACTaGTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATC +
Preference number: 1 (lower is better)
Translates to: VPGLRSQNLCHLYRD*SQLRTTGKNQKVAI
Trigger: GATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCTCAGACCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 90 bp CTTCCCAGTATTTCCTGGATTTGTTCCTGGCAACCTCGCTGGGTCTaGACTGCTGGCCTGCCCAGTGGCAGAAGACTGCTTGCAACCTTT +
Preference number: 1 (lower is better)
Translates to: LPSISWICSWQPRWV*TAGLPSGRRLLATF
Trigger: AAAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTTGCCAGGAACAAATCCAGGAAATACTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp CCTGGATTTGTTCCTGGCAACCTCGCTGGGTCTGAACTGCTGGCCTaGCCAGTGGCAGAAGACTGCTTGCAACCTTTGGTAGGCTTTTTA +
Preference number: 1 (lower is better)
Translates to: PGFVPGNLAGSELLA*PVAEDCLQPLVGFL
Trigger: TAAAAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTTGCCAGGAACAAATCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp CAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTaGCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAG +
Preference number: 1 (lower is better)
Translates to: QTPKHLVPGLRSQNL*HLYRDCSQLRTTGK
Trigger: CTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp TTCAGAGGTGCCCATTCCTTTCCCACAGCTACTGGTTCCTCTTGCTaGTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTT +
Preference number: 1 (lower is better)
Translates to: FRGAHSFPTATGSSC*FQRGLSSSFKEDAL
Trigger: AAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGAATGGGCACCTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp AGCCCTGCCTCTCACAATCTTTCCCCATTTCTGCTGCCTCTTTGTTaGCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGC +
Preference number: 1 (lower is better)
Translates to: SPASHNLSPFLLPLC*LWRMKRAFSLALKC
Trigger: GCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAAAGATTGTGAGAGGCAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp GCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCCTTGTCTTTaGATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGTGACA +
Preference number: 1 (lower is better)
Translates to: AEDNRQEPEGGHPCL*IQQRQSLRDKLLVT
Trigger: TGTCACCAAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp AACCTCGCTGGGTCTGAACTGCTGGCCTGCCCAGTGGCAGAAGACTaGTTGCAACCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTA +
Preference number: 1 (lower is better)
Translates to: NLAGSELLACPVAED*LQPLVGFLEIYVTV
Trigger: TACGGTCACATAAATTTCTAAAAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 90 bp ACACACCTGCTTCTACAACTAAGCCACAAGATGACCAGAACACACTaGGAGTACCAGTTCTCAGAGCCTCAGCTGAAAATTCACCTGAAT +
Preference number: 1 (lower is better)
Translates to: THLLLQLSHKMTRTH*EYQFSEPQLKIHLN
Trigger: ATTCAGGTGAATTTTCAGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTTAGTTGTAGAAGCAGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 90 bp CCCTTTTTACATATAAGAAAACTCAGGGTTGAGGGCAACATATCTTaGCTAAGTCCAGGTCTAGACCCAAGCCCTGCCTCTCACAATCTT +
Preference number: 1 (lower is better)
Translates to: PFLHIRKLRVEGNIS*LSPGLDPSPASHNL
Trigger: AAGATTGTGAGAGGCAGGGCTTGGGTCTAGACCTGGACTTAGGCAAGATATGTTGCCCTCAACCCTGAGTTTTCTTATATGTAAAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 90 bp TCAGATAGTCTGATCCTCTCCTTTGAAATGCAATGGAGACCATTGTaGCTGGGGGTGAATGCACACATTTGTTCTTCCATACAGAGACTC +
Preference number: 1 (lower is better)
Translates to: SDSLILSFEMQWRPL*LGVNAHICSSIQRL
Trigger: GAGTCTCTGTATGGAAGAACAAATGTGTGCATTCACCCCCAGTCACAATGGTCTCCATTGCATTTCAAAGGAGAGGATCAGACTATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CCA 90 bp GGTTTAGGATTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATaGCAAATCTTGACCTCATCTAGTCCAGCCCAACCTTCCCTTTTT +
Preference number: 1 (lower is better)
Translates to: GLGLILILWNISLPE*QILTSSSPAQPSLF
Trigger: AAAAAGGGAAGGTTGGGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAATCCTAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 90 bp TCTTCCATACAGAGACTCATTCTTTATATATACTCAACGGTAATTTaGATCGTTAGGAATCCTGAGAAACACTCACCCCTGGGCACACAC +
Preference number: 1 (lower is better)
Translates to: SSIQRLILYIYSTVI*IVRNPEKHSPLGTH
Trigger: GTGTGTGCCCAGGGGTGAGTGTTTCTCAGGATTCCTAACGATTCAAATTACCGTTGAGTATATATAAAGAATGAGTCTCTGTATGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGAAGTCGCTGGGAGATaGGACAAAGGGAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVEVAGR*DKGREG
Trigger: GCCCTCCCTCCCTTTGTCCCATCTCCCAGCGACTTC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp GCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTaGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCACCTTTACCGA +
Preference number: 2 (lower is better)
Translates to: AMRMVAQPGHQTPKH*VPGLRSQNLCHLYR
Trigger: TCGGTAAAGGTGGCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCATTCCAGCACTGCAGTaGACTAGGACGGGCTCGCTG +
Preference number: 2 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCIPALQ*TRTGSL
Trigger: CAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAAT...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR GCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTCTGAACTGCTGGCCTaGCCAGTGGCAGAAGACTGC +
Preference number: 2 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCSELLA*PVAEDC
Trigger: GCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGAAGTCGCTGGGAGATaGGACAAAGGGAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHEVAGR*DKGREG
Trigger: GCCCTCCCTCCCTTTGTCCCATCTCCCAGCGACTTC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp TCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATaGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAA +
Preference number: 2 (lower is better)
Translates to: SCCWEDNSSVGVRSQ*LQDADRGVCGDVRE
Trigger: TTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCAATGGAGACCATTGTaGCTGGGGGTGAATGCACAC +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVQWRPL*LGVNAH
Trigger: GTGTGCATTCACCCCCAGTCACAATGGTCTCCATTG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGCTACTGGTTCCTCTTaGTGCTTCCAGAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVATGSS*CFQRGL
Trigger: CAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTGCTGGCCTGCCCAGTaGCAGAAGACTGCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGCWPAQ*QKTACN
Trigger: GTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTACTGGCTTGATGTCTaGACCATCATGGCGCGCTGG +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHYWLDV*TIMARW
Trigger: CCAGCGCGCCATGATGGTGCAGACATCAAGCCAGTA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTCAATTGCTCCAGGATaGCGACAGGGGTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHSIAPG*RQGCVW
Trigger: CCACACACACCCCTGTCGGCATCCTGGAGCAATTGA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCCAGTGGCAGAAGACTaGTTGCAACCTTTGGTAGGC +
Preference number: 2 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCPVAED*LQPLVG
Trigger: GCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGAAGTCGCTGGGAGATaGGACAAAGGGAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: FPISAASLLPLEDEEGFFEVAGR*DKGREG
Trigger: GCCCTCCCTCCCTTTGTCCCATCTCCCAGCGACTTC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp TCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTaGCCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAA +
Preference number: 2 (lower is better)
Translates to: SDSQAFGPRSEVTES*PPLPRLLSAEDNRQ
Trigger: TTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAGATTCAGTAGTCGGTaGTTCCAGTCCTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHRFSSR*FQSWVL
Trigger: CAGCACCCAGGACTGGAATCACCGACTACTGAATCT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCGAAAGACAACTGTGTaGTCCAACCACTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHRKTTV*SNHCPL
Trigger: TAGGGGGCAGTGGTTGGATCACACAGTTGTCTTTCG...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGTTGCCTCTGGAGGATaGAGAGGGCTTTTTCGCTTG +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHVASGG*RGLFRL
Trigger: CAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAAC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTGCTACTGGTTCCTCTTaGTGCTTCCAGAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAATGSS*CFQRGL
Trigger: CAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGC...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGTGTCCGGTCTCAATTaGTCCAGGATGCCGACAGGG +
Preference number: 2 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAVSGLN*SRMPTG
Trigger: CCCTGTCGGCATCCTGGAGCAATTGAGACCGGACAC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCCAGTGGCAGAAGACTaGTTGCAACCTTTGGTAGGC +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGPVAED*LQPLVG
Trigger: GCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTCTAGACCCAAGCCCTaGCTCTCACAATCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHSRPKP*LSQSFP
Trigger: GGGGAAAGATTGTGAGAGGCAGGGCTTGGGTCTAGA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGGACAGGCCCCAAACTaGGATCCTTTTTGTATCTTT +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVGQAPN*DPFCIF
Trigger: AAAGATACAAAAAGGATCTCAGTTTGGGGCCTGTCC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGTCCAGTCCTGGGTGCTaGGTGTGCAGTAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEESSPGC*VCSRRQ
Trigger: TTGCCTCCTACTGCACACTCAGCACCCAGGACTGGA...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTCAATTGCTCCAGGATaGCGACAGGGGTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: FPISAASLLPLEDEEGFFSIAPG*RQGCVW
Trigger: CCACACACACCCCTGTCGGCATCCTGGAGCAATTGA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTGTGTCCGGTCTCAATTaGTCCAGGATGCCGACAGGG +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIVSGLN*SRMPTG
Trigger: CCCTGTCGGCATCCTGGAGCAATTGAGACCGGACAC...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTAGGGCAGAGAGGTGTTaGTCAGCCTTCAGCCTGACC +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIRAERC*SAFSLT
Trigger: GGTCAGGCTGAAGGCTGAGCAACACCTCTCTGCCCT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACTTTCCCACAGCTACTaGTTCCTCTTGCTGCTTCCA +
Preference number: 2 (lower is better)
Translates to: SPTANPPEAGFPMVQLLELSHSY*FLLLLP
Trigger: TGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTGCTGGCCTGCCCAGTaGCAGAAGACTGCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLICWPAQ*QKTACN
Trigger: GTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCTTCCCAGTATTTCCTaGATTTGTTCCTGGCAACCT +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVLPSIS*ICSWQP
Trigger: AGGTTGCCAGGAACAAATCCAGGAAATACTGGGAAG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp AAGCCCTGCCTCTCACAATCTTTCCCCATTTCTGCTGCCTCTTTGTaGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATG +
Preference number: 2 (lower is better)
Translates to: KPCLSQSFPISAASL*PLEDEEGFFACPQM
Trigger: CATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAAAGATTGTGAGAGGCAGGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTAGATTCAGTAGTCGGTaGTTCCAGTCCTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTRFSSR*FQSWVL
Trigger: CAGCACCCAGGACTGGAATCACCGACTACTGAATCT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCAATTTGAGGCTGCAGTaGACAATGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCNLRLQ*TMIMPL
Trigger: CAGTGGCATGATCATTGTTCACTGCAGCCTCAAATT...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTGGTGCGAGGATTGCTTaGGCCCAGGAATTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIGARIA*AQEFEA
Trigger: AGCCTCAAATTCCTGGGCTCAAGCAATCCTCGCACC...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGTGCGAGGATTGCTTaGGCCCAGGAATTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLGARIA*AQEFEA
Trigger: AGCCTCAAATTCCTGGGCTCAAGCAATCCTCGCACC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGCAGGTTCTAGAGGGTaGCACCAGCAGGGATCTCTC +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSAGSRG*HQQGSL
Trigger: GAGAGATCCCTGCTGGTGTCACCCTCTAGAACCTGC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCAAGAAAACTCAGGGTTaGGGGCAACATATCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCKKTQG*GQHILP
Trigger: AGGCAAGATATGTTGCCCTCAACCCTGAGTTTTCTT...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTCAATTGCTCCAGGATaGCGACAGGGGTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLISIAPG*RQGCVW
Trigger: CCACACACACCCCTGTCGGCATCCTGGAGCAATTGA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGTGTCCGGTCTCAATTaGTCCAGGATGCCGACAGGG +
Preference number: 2 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEVSGLN*SRMPTG
Trigger: CCCTGTCGGCATCCTGGAGCAATTGAGACCGGACAC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTCTTCTCCATTCATATaGAGCCAAATTTCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVSSPFI*SQISQA
Trigger: TGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTTTCCCCATTTCTGCTaGCTCTTTGTTGCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHFPHFC*LFVASG
Trigger: TCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAAA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCCTTGTCTTTaGATTCAACAGCGCCAAAGT +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGGHPCL*IQQRQS
Trigger: ACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCC...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTCGGACAATATCCAGTaGGTAAATGGGCAGGTTCCT +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHSDNIQ*VNGQVP
Trigger: AGGAACCTGCCCATTTACCCACTGGATATTGTCCGA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTAGGACAACAGCTCTGTaGGTGTCCGGTCTCAATTGC +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTRTTAL*VSGLNC
Trigger: GCAATTGAGACCGGACACCCACAGAGCTGTTGTCCT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCAACCCTCCAGAAGCTaGGTTTCCCATGGTTCAATT +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGQPSRS*VSHGSI
Trigger: AATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCCTCTTTGTTGCCTCTaGAGGATGAAGAGGGCTTTT +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGPLCCL*RMKRAF
Trigger: AAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp TACATACGTCAGGGTTTCCTTAGCATCAGGGCGGGTGAATCTGAATaGTTCCAGCTCCACCTAGAAGCACAGAAAGCTCAGCCCTTACAG +
Preference number: 2 (lower is better)
Translates to: YIRQGFLSIRAGESE*FQLHLEAQKAQPLQ
Trigger: CTGTAAGGGCTGAGCTTTCTGTGCTTCTAGGTGGAGCTGGAACAATTCAGATTCACCCGCCCTGATGCTAAGGAAACCCTGACGTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp CTCGCTGGGTCTGAACTGCTGGCCTGCCCAGTGGCAGAAGACTGCTaGCAACCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATG +
Preference number: 2 (lower is better)
Translates to: LAGSELLACPVAEDC*QPLVGFLEIYVTVM
Trigger: CATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGACCCAGCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGGACAGGCCCCAAACTaGGATCCTTTTTGTATCTTT +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHGQAPN*DPFCIF
Trigger: AAAGATACAAAAAGGATCTCAGTTTGGGGCCTGTCC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCAACAAAACATCCAAATaGCCCAAGATAACCACACCA +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVNKTSK*PKITTP
Trigger: TGGTGTGGTTATCTTGGGTCATTTGGATGTTTTGTT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTCAGCCCTTACAGTCTaGCACACAGAAACAAACAAA +
Preference number: 2 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCSALTV*HTETNK
Trigger: TTTGTTTGTTTCTGTGTGTCAGACTGTAAGGGCTGA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCTTTACTTCCTCTTCTaGGTACATAAAAACCGCTGT +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVLYFLF*VHKNRC
Trigger: ACAGCGGTTTTTATGTACTCAGAAGAGGAAGTAAAG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTACTGGTTCCTCTTGCTaGTTCCAGAGAGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLITGSSC*FQRGLS
Trigger: GGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCCCCTGCCCCTTAGCTaGAAACTTTCTGGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLPLPLS*KLSGGF
Trigger: GAAACCACCAGAAAGTTTGCAGCTAAGGGGCAGGGG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTGTGACCGTAATGGCTaGATTTCTGCAACCATAATA +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVCDRNG*ISATII
Trigger: TATTATGGTTGCAGAAATGCAGCCATTACGGTCACA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTATCTTTCCCCATTTCTaGTGCCTCTTTGTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGIFPHF*CLFVAS
Trigger: AGAGGCAACAAAGAGGCAGCAGAAATGGGGAAAGAT...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGATGTCTGCACCATCATaGCGCGCTGGTCTCGCATTT +
Preference number: 2 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEMSAPS*RAGLAF
Trigger: AAATGCGAGACCAGCGCGCCATGATGGTGCAGACAT...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTAGGACAACAGCTCTGTaGGTGTCCGGTCTCAATTGC +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIRTTAL*VSGLNC
Trigger: GCAATTGAGACCGGACACCCACAGAGCTGTTGTCCT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACAGAAACATGAATATTaGAAGTCGCTGGGAGATGGG +
Preference number: 2 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEQKHEY*KSLGDG
Trigger: CCCATCTCCCAGCGACTTCCAATATTCATGTTTCTG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATATCAGCCTCCCAGAATaGCAAATCTTGACCTCATCT +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHISLPE*QILTSS
Trigger: AGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGAT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTATATTCAGATAGTCTaGTCCTCTCCTTTGAAATGC +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVYIQIV*SSPLKC
Trigger: GCATTTCAAAGGAGAGGATCAGACTATCTGAATATA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACAACCTCGCTGGGTCTaGACTGCTGGCCTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: LILILWNISLPEWQILTSQPRWV*TAGLPS
Trigger: ACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTTG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCAAGTCTCAGAAATGTaGCATGTCTCTGTAGCAGCC +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTQVSEM*HVSVAA
Trigger: GGCTGCTACAGAGACATGTCACATTTCTGAGACTTG...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTACTTTGCAAGCATTTTaGACACAGGGTGATGATGCA +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGTLQAF*TQGDDA
Trigger: TGCATCATCACCCTGTGTGCAAAATGCTTGCAAAGT...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCACATTTAGACTACTTTaGAAGCATTTTGCACACAGG +
Preference number: 2 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVTFRLL*KHFAHR
Trigger: CCTGTGTGCAAAATGCTTGCAAAGTAGTCTAAATGT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCTTTCCCACAGCTACTaGTTCCTCTTGCTGCTTCCA +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLLSHSY*FLLLLP
Trigger: TGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTACACCATCTTGTTGCTaGGAGGACAACAGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLTPSCC*EDNSSV
Trigger: CACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGT...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTACACCATCTTGTTGCTaGGAGGACAACAGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLITPSCC*EDNSSV
Trigger: CACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTAATATTGGAAGTCGCTaGGAGATGGGACAAAGGGAG +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTNIGSR*EMGQRE
Trigger: CTCCCTTTGTCCCATCTCCCAGCGACTTCCAATATT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTTCAATATGGGGTTATaGTACTGTGTGACATCTCCC +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGFNMGL*YCVTSP
Trigger: GGGAGATGTCACACAGTACCATAACCCCATATTGAA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAAACAAAACATCCAAATaGCCCAAGATAACCACACCA +
Preference number: 2 (lower is better)
Translates to: SPTANPPEAGFPMVQLLENKTSK*PKITTP
Trigger: TGGTGTGGTTATCTTGGGTCATTTGGATGTTTTGTT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAACAAAACATCCAAATaGCCCAAGATAACCACACCA +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHNKTSK*PKITTP
Trigger: TGGTGTGGTTATCTTGGGTCATTTGGATGTTTTGTT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCATTGTGACTGGGGGTaGATGCACACATTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: FPISAASLLPLEDEEGFFHCDWG*MHTFVL
Trigger: AAGAACAAATGTGTGCATTCACCCCCAGTCACAATG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCTTTACTTCCTCTTCTaGGTACATAAAAACCGCTGT +
Preference number: 2 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHLYFLF*VHKNRC
Trigger: ACAGCGGTTTTTATGTACTCAGAAGAGGAAGTAAAG...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTGTGACCGTAATGGCTaGATTTCTGCAACCATAATA +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGCDRNG*ISATII
Trigger: TATTATGGTTGCAGAAATGCAGCCATTACGGTCACA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTATCTTTCCCCATTTCTaGTGCCTCTTTGTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTIFPHF*CLFVAS
Trigger: AGAGGCAACAAAGAGGCAGCAGAAATGGGGAAAGAT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGAAGTCGCTGGGAGATaGGACAAAGGGAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LILILWNISLPEWQILTSEVAGR*DKGREG
Trigger: GCCCTCCCTCCCTTTGTCCCATCTCCCAGCGACTTC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp AACAAACAAAACATCCAAATGACCCAAGATAACCACACCATCTTGTaGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCT +
Preference number: 2 (lower is better)
Translates to: NKQNIQMTQDNHTIL*LGGQQLCGCPVSIA
Trigger: AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTTATCTTGGGTCATTTGGATGTTTTGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp TCTGAACTGCTGGCCTGCCCAGTGGCAGAAGACTGCTTGCAACCTTaGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTT +
Preference number: 2 (lower is better)
Translates to: SELLACPVAEDCLQP*VGFLEIYVTVMAAF
Trigger: AAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp CCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTaGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: PCLCIQQRQSLRDKL*VTSLRNVTCLCSSH
Trigger: ATGGCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGACAGGCCCCAAACTaGGATCCTTTTTGTATCTTT +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLGQAPN*DPFCIF
Trigger: AAAGATACAAAAAGGATCTCAGTTTGGGGCCTGTCC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTCAGCCCTTACAGTCTaGCACACAGAAACAAACAAA +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTSALTV*HTETNK
Trigger: TTTGTTTGTTTCTGTGTGTCAGACTGTAAGGGCTGA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCATGACCAGAACACACTaGGAGTACCAGTTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSMTRTH*EYQFSE
Trigger: CTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCAT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTCAAGTGGAGGAGCTTaGAGTAGCAGCAATACATGT +
Preference number: 2 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFSSGGA*SSSNTC
Trigger: ACATGTATTGCTGCTACTTCAAGCTCCTCCACTTGA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTAGTGGATTCTATTTTTaGCTGATGTGTTTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGSGFYF*LMCFWA
Trigger: AGCCCAAAAACACATCAGTCAAAAATAGAATCCACT...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCGGTGCGAGGATTGCTTaGGCCCAGGAATTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPGARIA*AQEFEA
Trigger: AGCCTCAAATTCCTGGGCTCAAGCAATCCTCGCACC...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGCAGGTTCTAGAGGGTaGCACCAGCAGGGATCTCTC +
Preference number: 2 (lower is better)
Translates to: LILILWNISLPEWQILTSAGSRG*HQQGSL
Trigger: GAGAGATCCCTGCTGGTGTCACCCTCTAGAACCTGC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTGTGACTGGGGGTGAATaGACACATTTGTTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIVTGGE*THLFFH
Trigger: ATGGAAGAACAAATGTGTGCATTCACCCCCAGTCAC...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTGGTCTTCATCCGTCTTaGTACCAGCAAACTATTCAA +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTGLHPS*YQQTIQ
Trigger: TTGAATAGTTTGCTGGTAGCAAGACGGATGAAGACC...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp AGAAACAAACAAAACATCCAAATGACCCAAGATAACCACACCATCTaGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATT +
Preference number: 2 (lower is better)
Translates to: RNKQNIQMTQDNHTI*LLGGQQLCGCPVSI
Trigger: AATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTTATCTTGGGTCATTTGGATGTTTTGTTTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTCCAGTCCTGGGTGCTaGGTGTGCAGTAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: NRNLELRILSGNSYRIYLSSPGC*VCSRRQ
Trigger: TTGCCTCCTACTGCACACTCAGCACCCAGGACTGGA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGATTCAGTAGTCGGTaGTTCCAGTCCTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPRFSSR*FQSWVL
Trigger: CAGCACCCAGGACTGGAATCACCGACTACTGAATCT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTACTCAACGGTAATTTaGATCGTTAGGAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: FPISAASLLPLEDEEGFFYSTVI*IVRNPE
Trigger: CTCAGGATTCCTAACGATTCAAATTACCGTTGAGTA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACATTGTGACTGGGGGTaGATGCACACATTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEHCDWG*MHTFVL
Trigger: AAGAACAAATGTGTGCATTCACCCCCAGTCACAATG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTAGGGATCTCTCATCTTaGTTAAATTGGCACATCAAC +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTRDLSS*LNWHIN
Trigger: GTTGATGTGCCAATTTAATCAAGATGAGAGATCCCT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGATGCCATAATTGCATaGTTATCTACACCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: KPQDDQNTLRVPVLRASADAIIA*LSTPVP
Trigger: AGGAACTGGTGTAGATAAGCATGCAATTATGGCATC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGGTGTCCGGTCTCAATTaGTCCAGGATGCCGACAGGG +
Preference number: 2 (lower is better)
Translates to: NRNLELRILSGNSYRIYLVSGLN*SRMPTG
Trigger: CCCTGTCGGCATCCTGGAGCAATTGAGACCGGACAC...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGAAAATTCACCTGAATaGACATTACTAATCCAGGTT +
Preference number: 2 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEENSPE*TLLIQV
Trigger: AACCTGGATTAGTAATGTGCATTCAGGTGAATTTTC...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGTGACTGGGGGTGAATaGACACATTTGTTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEVTGGE*THLFFH
Trigger: ATGGAAGAACAAATGTGTGCATTCACCCCCAGTCAC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGTCTTCATCCGTCTTaGTACCAGCAAACTATTCAA +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLGLHPS*YQQTIQ
Trigger: TTGAATAGTTTGCTGGTAGCAAGACGGATGAAGACC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTCATCGGGCACACCGTaGTCAGGCCATGCGACGTAC +
Preference number: 2 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYSSGTP*SGHATY
Trigger: GTACGTCGCATGGCCTGACCACGGTGTGCCCGATGA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR CCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGACAACAGCTCTGTaGGTGTCCGGTCTCAATTGC +
Preference number: 2 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPRTTAL*VSGLNC
Trigger: GCAATTGAGACCGGACACCCACAGAGCTGTTGTCCT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGCAGAAACATGAATATTaGAAGTCGCTGGGAGATGGG +
Preference number: 2 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLQKHEY*KSLGDG
Trigger: CCCATCTCCCAGCGACTTCCAATATTCATGTTTCTG...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTCCATCCCCCTTTCTTaGAGCTTGCTGAATTTTTGT +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLSIPLS*SLLNFC
Trigger: ACAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTCAGCCCTTACAGTCTaGCACACAGAAACAAACAAA +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSSALTV*HTETNK
Trigger: TTTGTTTGTTTCTGTGTGTCAGACTGTAAGGGCTGA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCAGATTCAGTAGTCGGTaGTTCCAGTCCTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: FGRLFRNLCDRNGCISATRFSSR*FQSWVL
Trigger: CAGCACCCAGGACTGGAATCACCGACTACTGAATCT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTACTCAACGGTAATTTaGATCGTTAGGAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIYSTVI*IVRNPE
Trigger: CTCAGGATTCCTAACGATTCAAATTACCGTTGAGTA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTACTCAACGGTAATTTaGATCGTTAGGAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLYSTVI*IVRNPE
Trigger: CTCAGGATTCCTAACGATTCAAATTACCGTTGAGTA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCAGTGGATTCTATTTTTaGCTGATGTGTTTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: FPISAASLLPLEDEEGFFSGFYF*LMCFWA
Trigger: AGCCCAAAAACACATCAGTCAAAAATAGAATCCACT...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTACAGGATTTACTTaGATTGTTTGCTCTTTTAGG +
Preference number: 2 (lower is better)
Translates to: FPISAASLLPLEDEEGFFATGFT*IVCSFR
Trigger: CCTAAAAGAGCAAACAATTCAAGTAAATCCTGTAGC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGTGAAACAGGAATCTTaGGCTACGGATTTTAAGTGG +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSVKQES*ATDFKW
Trigger: CCACTTAAAATCCGTAGCTCAAGATTCCTGTTTCAC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAAGGGCAGAGAGGTGTTaGTCAGCCTTCAGCCTGACC +
Preference number: 2 (lower is better)
Translates to: RLFRNLCDRNGCISATIIRAERC*SAFSLT
Trigger: GGTCAGGCTGAAGGCTGAGCAACACCTCTCTGCCCT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGGTCTTCATCCGTCTTaGTACCAGCAAACTATTCAA +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSGLHPS*YQQTIQ
Trigger: TTGAATAGTTTGCTGGTAGCAAGACGGATGAAGACC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTCTTCTCCATTCATATaGAGCCAAATTTCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSSSPFI*SQISQA
Trigger: TGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAACCATCATGGCGCGCTaGTCTCGCATTTTTCGGACA +
Preference number: 2 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQTIMAR*SRIFRT
Trigger: TGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGT...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCTAGGATCCAGCATTTaGACTAAACCTTCTTCATAC +
Preference number: 2 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLLGSSI*TKPSSY
Trigger: GTATGAAGAAGGTTTAGTCCAAATGCTGGATCCTAG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTGTCCCATCTCCCCTTaGGAAAATCATAAGGTTTCA +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSCPISP*ENHKVS
Trigger: TGAAACCTTATGATTTTCCCAAGGGGAGATGGGACA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCAACAAAACATCCAAATaGCCCAAGATAACCACACCA +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSNKTSK*PKITTP
Trigger: TGGTGTGGTTATCTTGGGTCATTTGGATGTTTTGTT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCAATGGAGACCATTGTaGCTGGGGGTGAATGCACAC +
Preference number: 2 (lower is better)
Translates to: NRNLELRILSGNSYRIYLQWRPL*LGVNAH
Trigger: GTGTGCATTCACCCCCAGTCACAATGGTCTCCATTG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGGTGGGAAGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: RLFRNLCDRNGCISATIIGGKIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCTTCCCACC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGGATGCCATAATTGCATaGTTATCTACACCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLDAIIA*LSTPVP
Trigger: AGGAACTGGTGTAGATAAGCATGCAATTATGGCATC...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTGAAAATTCACCTGAATaGACATTACTAATCCAGGTT +
Preference number: 2 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTENSPE*TLLIQV
Trigger: AACCTGGATTAGTAATGTGCATTCAGGTGAATTTTC...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCCCCTGCCCCTTAGCTaGAAACTTTCTGGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: NRNLELRILSGNSYRIYLPLPLS*KLSGGF
Trigger: GAAACCACCAGAAAGTTTGCAGCTAAGGGGCAGGGG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTACATTTAGACTACTTTaGAAGCATTTTGCACACAGG +
Preference number: 2 (lower is better)
Translates to: LLPLEDEEGFFACPQMLITFRLL*KHFAHR
Trigger: CCTGTGTGCAAAATGCTTGCAAAGTAGTCTAAATGT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACTTTCCCACAGCTACTaGTTCCTCTTGCTGCTTCCA +
Preference number: 2 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQLSHSY*FLLLLP
Trigger: TGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAG...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCAATGGAGACCATTGTaGCTGGGGGTGAATGCACAC +
Preference number: 2 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYQWRPL*LGVNAH
Trigger: GTGTGCATTCACCCCCAGTCACAATGGTCTCCATTG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTATATTCAGATAGTCTaGTCCTCTCCTTTGAAATGC +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSYIQIV*SSPLKC
Trigger: GCATTTCAAAGGAGAGGATCAGACTATCTGAATATA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAAGTGGATTCTATTTTTaGCTGATGTGTTTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: HLNFCQRSLHPPFLELAESGFYF*LMCFWA
Trigger: AGCCCAAAAACACATCAGTCAAAAATAGAATCCACT...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGCTACAGGATTTACTTaGATTGTTTGCTCTTTTAGG +
Preference number: 2 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSATGFT*IVCSFR
Trigger: CCTAAAAGAGCAAACAATTCAAGTAAATCCTGTAGC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAACTGGTTCCTCTTGCTaGTTCCAGAGAGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: RLFRNLCDRNGCISATIITGSSC*FQRGLS
Trigger: GGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTGAAAATTCACCTGAATaGACATTACTAATCCAGGTT +
Preference number: 2 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFENSPE*TLLIQV
Trigger: AACCTGGATTAGTAATGTGCATTCAGGTGAATTTTC...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACAACCCTCCAGAAGCTaGGTTTCCCATGGTTCAATT +
Preference number: 2 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQQPSRS*VSHGSI
Trigger: AATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTG...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGTGACTGGGGGTGAATaGACACATTTGTTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LILILWNISLPEWQILTSVTGGE*THLFFH
Trigger: ATGGAAGAACAAATGTGTGCATTCACCCCCAGTCAC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAACACCATCTTGTTGCTaGGAGGACAACAGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: RLFRNLCDRNGCISATIITPSCC*EDNSSV
Trigger: CACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACAGAAACATGAATATTaGAAGTCGCTGGGAGATGGG +
Preference number: 2 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQQKHEY*KSLGDG
Trigger: CCCATCTCCCAGCGACTTCCAATATTCATGTTTCTG...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTGTCCCATCTCCCCTTaGGAAAATCATAAGGTTTCA +
Preference number: 2 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPCPISP*ENHKVS
Trigger: TGAAACCTTATGATTTTCCCAAGGGGAGATGGGACA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCAACCCTCCAGAAGCTaGGTTTCCCATGGTTCAATT +
Preference number: 2 (lower is better)
Translates to: NRNLELRILSGNSYRIYLQPSRS*VSHGSI
Trigger: AATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 90 bp TCCCATATAGGTCTTCATCCGTCTTGCTACCAGCAAACTATTCAATaGGCACCGAATTTGCTGAATATCAAAATGGCTTCATTTATGTGC +
Preference number: 2 (lower is better)
Translates to: SHIGLHPSCYQQTIQ*APNLLNIKMASFMC
Trigger: GCACATAAATGAAGCCATTTTGATATTCAGCAAATTCGGTGCCAATTGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCTATATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAATGACCAGAACACACTaGGAGTACCAGTTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: RLFRNLCDRNGCISATIIMTRTH*EYQFSE
Trigger: CTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCAT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATCTCCCTCCCACCTCTaGCATTTAGCAGTAAAATAT +
Preference number: 2 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQSPSHL*HLAVKY
Trigger: ATATTTTACTGCTAAATGGCAGAGGTGGGAGGGAGA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATAATATTGGAAGTCGCTaGGAGATGGGACAAAGGGAG +
Preference number: 2 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYNIGSR*EMGQRE
Trigger: CTCCCTTTGTCCCATCTCCCAGCGACTTCCAATATT...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTATATTCAGATAGTCTaGTCCTCTCCTTTGAAATGC +
Preference number: 2 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPYIQIV*SSPLKC
Trigger: GCATTTCAAAGGAGAGGATCAGACTATCTGAATATA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTATCCAGTGGGTAAATaGGCAGGTTCCTCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYYPVGK*AGSSQL
Trigger: TAACTGAGAGGAACCTGCCCATTTACCCACTGGATA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATCTGATCCTCTCCTTTaGAATGCAATGGAGACCATT +
Preference number: 2 (lower is better)
Translates to: RLFRNLCDRNGCISATIISDPLL*NAMETI
Trigger: AATGGTCTCCATTGCATTTCAAAGGAGAGGATCAGA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCTATATTCAGATAGTCTaGTCCTCTCCTTTGAAATGC +
Preference number: 2 (lower is better)
Translates to: FGRLFRNLCDRNGCISATYIQIV*SSPLKC
Trigger: GCATTTCAAAGGAGAGGATCAGACTATCTGAATATA...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGTGAAACAGGAATCTTaGGCTACGGATTTTAAGTGG +
Preference number: 2 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYVKQES*ATDFKW
Trigger: CCACTTAAAATCCGTAGCTCAAGATTCCTGTTTCAC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTTCAATATGGGGTTATaGTACTGTGTGACATCTCCC +
Preference number: 2 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYFNMGL*YCVTSP
Trigger: GGGAGATGTCACACAGTACCATAACCCCATATTGAA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCTTGGGAAAGAGGAATaGACTTTTTCACAGTTGTCT +
Preference number: 2 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSLGKEE*TFSQLS
Trigger: AGACAACTGTGAAAAAGTTCATTCCTCTTTCCCAAG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATACTCAACGGTAATTTaGATCGTTAGGAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: RLFRNLCDRNGCISATIIYSTVI*IVRNPE
Trigger: CTCAGGATTCCTAACGATTCAAATTACCGTTGAGTA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTTTCTTGGAGCTTGCTaGATTTTTGTGAGTCCAGAT +
Preference number: 2 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYFLGAC*IFVSPD
Trigger: ATCTGGACTCACAAAAATTCAGCAAGCTCCAAGAAA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGATGCCATAATTGCATaGTTATCTACACCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYDAIIA*LSTPVP
Trigger: AGGAACTGGTGTAGATAAGCATGCAATTATGGCATC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 72 bp GGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTaGTCCAGGATGCCGACAGGGGTGTGTGTGGTGATG +
Preference number: 3 (lower is better)
Translates to: GRTTALWVSGLN*SRMPTGVCVVM
Trigger: CATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 72 bp GTTCCTGGCAACCTCGCTGGGTCTGAACTGCTGGCCTaGCCAGTGGCAGAAGACTGCTTGCAACCTTTGGTA +
Preference number: 3 (lower is better)
Translates to: VPGNLAGSELLA*PVAEDCLQPLV
Trigger: TACCAAAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTTGCCAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CCA 72 bp CCACACCATCTTGTTGCTGGGAGGACAACAGCTCTGTaGGTGTCCGGTCTCAATTGCTCCAGGATGCCGACA +
Preference number: 3 (lower is better)
Translates to: PHHLVAGRTTAL*VSGLNCSRMPT
Trigger: TGTCGGCATCCTGGAGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CCA 72 bp GATTTGTTCCTGGCAACCTCGCTGGGTCTGAACTGCTaGCCTGCCCAGTGGCAGAAGACTGCTTGCAACCTT +
Preference number: 3 (lower is better)
Translates to: DLFLATSLGLNC*PAQWQKTACNL
Trigger: AAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTTGCCAGGAACAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGGTGTCCGGTCTCAATaGCTCCAGGATGCCGACAGG +
Preference number: 3 (lower is better)
Translates to: FPISAASLLPLEDEEGFFGVRSQ*LQDADR
Trigger: CCTGTCGGCATCCTGGAGCAATTGAGACCGGACACC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGTGGCAGAAGACTGCTaGCAACCTTTGGTAGGCTTT +
Preference number: 3 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVVAEDC*QPLVGF
Trigger: AAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCAC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 72 bp GCCCATTCCTTTCCCACAGCTACTGGTTCCTCTTGCTaGTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAG +
Preference number: 3 (lower is better)
Translates to: AHSFPTATGSSC*FQRGLSSSFKE
Trigger: CTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGAATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCATAATCCCAACAGTTTaGGAGGCTGAGGTGGGAAGA +
Preference number: 3 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVIIPTV*EAEVGR
Trigger: TCTTCCCACCTCAGCCTCCAAAACTGTTGGGATTAT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCCCCTTTCTTGGAGCTaGCTGAATTTTTGTGAGTCC +
Preference number: 3 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVPLSWS*LNFCES
Trigger: GGACTCACAAAAATTCAGCAAGCTCCAAGAAAGGGG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTCTGCTGCCTCTTTGTaGCCTCTGGAGGATGAAGAG +
Preference number: 3 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGSAASL*PLEDEE
Trigger: CTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 72 bp AGAATCTTTGCCACCTTTACCGAGACTGCTCTCAGCTaGGGACAACAGGCAAGAACCAGAAGGTGGCCATCC +
Preference number: 3 (lower is better)
Translates to: RIFATFTETALS*GQQARTRRWPS
Trigger: GGATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGGCAAAGATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCCAGAATGGCAAATCTaGACCTCATCTAGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGPEWQI*TSSSPA
Trigger: GGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTTCACACACAAACTaGTACTGGCTTGATGTCTGC +
Preference number: 3 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEASHTN*YWLDVC
Trigger: GCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGC...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTCAAGGAGGATGCCCTaGGGAAAGAGGAATGAACTT +
Preference number: 3 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGSRRMP*GKRNEL
Trigger: AAGTTCATTCCTCTTTCCCAAGGGCATCCTCCTTGA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAATCAAGGAGGATGCCCTaGGGAAAGAGGAATGAACTT +
Preference number: 3 (lower is better)
Translates to: SPTANPPEAGFPMVQLLESRRMP*GKRNEL
Trigger: AAGTTCATTCCTCTTTCCCAAGGGCATCCTCCTTGA...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCCCCTTTCTTGGAGCTaGCTGAATTTTTGTGAGTCC +
Preference number: 3 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGPLSWS*LNFCES
Trigger: GGACTCACAAAAATTCAGCAAGCTCCAAGAAAGGGG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCTCCATCCCCCTTTCTaGGAGCTTGCTGAATTTTTG +
Preference number: 3 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGLHPPF*ELAEFL
Trigger: CAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGAG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 72 bp CCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATaGAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCAT +
Preference number: 3 (lower is better)
Translates to: PHFCCLFVASGG*RGLFRLPSNAH
Trigger: ATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAGGTCTTCATCCGTCTaGCTACCAGCAAACTATTCA +
Preference number: 3 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHRSSSV*LPANYS
Trigger: TGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCAGTGGATTCTATTTTaGACTGATGTGTTTTTGGGC +
Preference number: 3 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVQWILF*TDVFLG
Trigger: GCCCAAAAACACATCAGTCAAAAATAGAATCCACTG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGTGGCAGAAGACTGCTaGCAACCTTTGGTAGGCTTT +
Preference number: 3 (lower is better)
Translates to: FPISAASLLPLEDEEGFFVAEDC*QPLVGF
Trigger: AAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCAC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCAGTATTTCCTGGATTaGTTCCTGGCAACCTCGCTG +
Preference number: 3 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTQYFLD*FLATSL
Trigger: CAGCGAGGTTGCCAGGAACAAATCCAGGAAATACTG...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCAGGGATCTCTCATCTaGATTAAATTGGCACATCAA +
Preference number: 3 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVQGSLI*IKLAHQ
Trigger: TTGATGTGCCAATTTAATCAAGATGAGAGATCCCTG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 72 bp AACAGGCAAGAACCAGAAGGTGGCCATCCTTGTCTTTaGATTCAACAGCGCCAAAGTCTGAGGGACAAACTC +
Preference number: 3 (lower is better)
Translates to: NRQEPEGGHPCL*IQQRQSLRDKL
Trigger: GAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCTTCTGGTTCTTGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTGATAACCACACCATCTaGTTGCTGGGAGGACAACAG +
Preference number: 3 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIDNHTI*LLGGQQ
Trigger: CTGTTGTCCTCCCAGCAACAAGATGGTGTGGTTATC...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCATAATCCCAACAGTTTaGGAGGCTGAGGTGGGAAGA +
Preference number: 3 (lower is better)
Translates to: FPISAASLLPLEDEEGFFIIPTV*EAEVGR
Trigger: TCTTCCCACCTCAGCCTCCAAAACTGTTGGGATTAT...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCAGTATTTCCTGGATTaGTTCCTGGCAACCTCGCTG +
Preference number: 3 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLQYFLD*FLATSL
Trigger: CAGCGAGGTTGCCAGGAACAAATCCAGGAAATACTG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 72 bp GGGTCTGAACTGCTGGCCTGCCCAGTGGCAGAAGACTaGTTGCAACCTTTGGTAGGCTTTTTAGAAATTTAT +
Preference number: 3 (lower is better)
Translates to: GSELLACPVAED*LQPLVGFLEIY
Trigger: ATAAATTTCTAAAAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR GCA 72 bp CATATAAGAAAACTCAGGGTTGAGGGCAACATATCTTaGCTAAGTCCAGGTCTAGACCCAAGCCCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: HIRKLRVEGNIS*LSPGLDPSPAS
Trigger: AGAGGCAGGGCTTGGGTCTAGACCTGGACTTAGGCAAGATATGTTGCCCTCAACCCTGAGTTTTCTTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CCA 72 bp ACACAAACTTGTACTGGCTTGATGTCTGCACCATCATaGCGCGCTGGTCTCGCATTTTTCGGACAATATCCA +
Preference number: 3 (lower is better)
Translates to: TQTCTGLMSAPS*RAGLAFFGQYP
Trigger: TGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAGACATCAAGCCAGTACAAGTTTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGGTGTCCGGTCTCAATaGCTCCAGGATGCCGACAGG +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPEWQILTSGVRSQ*LQDADR
Trigger: CCTGTCGGCATCCTGGAGCAATTGAGACCGGACACC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGCGGGTGAATCTGAATaGTTCCAGCTCCACCTAGAA +
Preference number: 3 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSAGESE*FQLHLE
Trigger: TTCTAGGTGGAGCTGGAACAATTCAGATTCACCCGC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCAGGTCTTCATCCGTCTaGCTACCAGCAAACTATTCA +
Preference number: 3 (lower is better)
Translates to: FPISAASLLPLEDEEGFFRSSSV*LPANYS
Trigger: TGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCT...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCATGGCATTTAAATTTTaGCCAGCGTTCCCTCCATCC +
Preference number: 3 (lower is better)
Translates to: FPISAASLLPLEDEEGFFMAFKF*PAFPPS
Trigger: GGATGGAGGGAACGCTGGCAAAAATTTAAATGCCAT...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAACCACACCATCTTGTaGCTGGGAGGACAACAGCTC +
Preference number: 3 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPNHTIL*LGGQQL
Trigger: GAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGTGAATGCACACATTaGTTCTTCCATACAGAGACT +
Preference number: 3 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLGECTH*FFHTET
Trigger: AGTCTCTGTATGGAAGAACAAATGTGTGCATTCACC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCAGCAAACTATTCAATaGGCACCGAATTTGCTGAAT +
Preference number: 3 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTQQTIQ*APNLLN
Trigger: ATTCAGCAAATTCGGTGCCAATTGAATAGTTTGCTG...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 72 bp TTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTaGCCTCATCTAGTCCAGCCCAACCTTCCCTTTTTA +
Preference number: 3 (lower is better)
Translates to: FSGISASQNGKS*PHLVQPNLPFL
Trigger: TAAAAAGGGAAGGTTGGGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CCA 72 bp ACTTTCTGGTGGTTTCTTGTTTTCAATATGGGGTTATaGTACTGTGTGACATCTCCCTCCCACCTCTGCCAT +
Preference number: 3 (lower is better)
Translates to: TFWWFLVFNMGL*YCVTSPSHLCH
Trigger: ATGGCAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGAAACCACCAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAAACCACACCATCTTGTaGCTGGGAGGACAACAGCTC +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPEWQILTSNHTIL*LGGQQL
Trigger: GAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTT...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCAATTGGCACCGAATTaGCTGAATATCAAAATGGCT +
Preference number: 3 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLQLAPN*LNIKMA
Trigger: AGCCATTTTGATATTCAGCAAATTCGGTGCCAATTG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTCTGGTGGTTTCTaGTTTTCAATATGGGGTTAT +
Preference number: 3 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTLSGGF*FSIWGY
Trigger: ATAACCCCATATTGAAAACAAGAAACCACCAGAAAG...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 72 bp CCTTTGAAATGCAATGGAGACCATTGTGACTGGGGGTaGATGCACACATTTGTTCTTCCATACAGAGACTCA +
Preference number: 3 (lower is better)
Translates to: PLKCNGDHCDWG*MHTFVLPYRDS
Trigger: TGAGTCTCTGTATGGAAGAACAAATGTGTGCATTCACCCCCAGTCACAATGGTCTCCATTGCATTTCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 72 bp TGGAAAGTCAAAACACCAAGTGCAGGTTCTAGAGGGTaGCACCAGCAGGGATCTCTCATCTTGATTAAATTG +
Preference number: 3 (lower is better)
Translates to: WKVKTPSAGSRG*HQQGSLILIKL
Trigger: CAATTTAATCAAGATGAGAGATCCCTGCTGGTGTCACCCTCTAGAACCTGCACTTGGTGTTTTGACTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGCGGGTGAATCTGAATaGTTCCAGCTCCACCTAGAA +
Preference number: 3 (lower is better)
Translates to: FGRLFRNLCDRNGCISATAGESE*FQLHLE
Trigger: TTCTAGGTGGAGCTGGAACAATTCAGATTCACCCGC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGCGGGTGAATCTGAATaGTTCCAGCTCCACCTAGAA +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPEWQILTSAGESE*FQLHLE
Trigger: TTCTAGGTGGAGCTGGAACAATTCAGATTCACCCGC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACAATTGGCACCGAATTaGCTGAATATCAAAATGGCT +
Preference number: 3 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEQLAPN*LNIKMA
Trigger: AGCCATTTTGATATTCAGCAAATTCGGTGCCAATTG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCAGCAAACTATTCAATaGGCACCGAATTTGCTGAAT +
Preference number: 3 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSQQTIQ*APNLLN
Trigger: ATTCAGCAAATTCGGTGCCAATTGAATAGTTTGCTG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCAGTGGATTCTATTTTaGACTGATGTGTTTTTGGGC +
Preference number: 3 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSQWILF*TDVFLG
Trigger: GCCCAAAAACACATCAGTCAAAAATAGAATCCACTG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCATAATCCCAACAGTTTaGGAGGCTGAGGTGGGAAGA +
Preference number: 3 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPIIPTV*EAEVGR
Trigger: TCTTCCCACCTCAGCCTCCAAAACTGTTGGGATTAT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACAGTATTTCCTGGATTaGTTCCTGGCAACCTCGCTG +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPEWQILTSQYFLD*FLATSL
Trigger: CAGCGAGGTTGCCAGGAACAAATCCAGGAAATACTG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CCA 72 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATaGCAAATCTTGACCTCATCTAGTCCAGCCCAACCT +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPE*QILTSSSPAQP
Trigger: AGGTTGGGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACAAACTTGTACTGGCTaGATGTCTGCACCATCATGG +
Preference number: 3 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQQTCTG*MSAPSW
Trigger: CCATGATGGTGCAGACATCAAGCCAGTACAAGTTTG...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
3UTR-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAAACCACACCATCTTGTaGCTGGGAGGACAACAGCTC +
Preference number: 3 (lower is better)
Translates to: RLFRNLCDRNGCISATIINHTIL*LGGQQL
Trigger: GAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGTCTTCATCCGTCTaGCTACCAGCAAACTATTCA +
Preference number: 3 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPRSSSV*LPANYS
Trigger: TGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAAGGTCTTCATCCGTCTaGCTACCAGCAAACTATTCA +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPEWQILTSRSSSV*LPANYS
Trigger: TGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCT...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCCCCTTTCTTGGAGCTaGCTGAATTTTTGTGAGTCC +
Preference number: 3 (lower is better)
Translates to: NRNLELRILSGNSYRIYLPLSWS*LNFCES
Trigger: GGACTCACAAAAATTCAGCAAGCTCCAAGAAAGGGG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTCAAGGAGGATGCCCTaGGGAAAGAGGAATGAACTT +
Preference number: 3 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYSRRMP*GKRNEL
Trigger: AAGTTCATTCCTCTTTCCCAAGGGCATCCTCCTTGA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGGTGAATGCACACATTaGTTCTTCCATACAGAGACT +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPEWQILTSGECTH*FFHTET
Trigger: AGTCTCTGTATGGAAGAACAAATGTGTGCATTCACC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACAGGGATCTCTCATCTaGATTAAATTGGCACATCAA +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPEWQILTSQGSLI*IKLAHQ
Trigger: TTGATGTGCCAATTTAATCAAGATGAGAGATCCCTG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR TCA 72 bp CAGAGACTCATTCTTTATATATACTCAACGGTAATTTaGATCGTTAGGAATCCTGAGAAACACTCACCCCTG +
Preference number: 3 (lower is better)
Translates to: QRLILYIYSTVI*IVRNPEKHSPL
Trigger: CAGGGGTGAGTGTTTCTCAGGATTCCTAACGATTCAAATTACCGTTGAGTATATATAAAGAATGAGTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACTTTCTGGTGGTTTCTaGTTTTCAATATGGGGTTAT +
Preference number: 3 (lower is better)
Translates to: LILILWNISLPEWQILTSLSGGF*FSIWGY
Trigger: ATAACCCCATATTGAAAACAAGAAACCACCAGAAAG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCCAGGGCCAGCTCCCGTaGGTGGGACTCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSQGQLP*VGLPAG
Trigger: GCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTG...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCAGGTAGGTCGCGCGTaGGGGCGGCGCGGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGQVGRA*GRRGSS
Trigger: CGAGCTTCCGCGCCGCCCGCACGCGCGACCTACCTG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGCAGGGCCAGCTCCCGTaGGTGGGACTCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLQGQLP*VGLPAG
Trigger: GCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTG...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCCTGCCCCTCCACCGTaGCCCTCAGGCTGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGPAPPP*PSGCGS
Trigger: TGAGCCGCAGCCTGAGGGGCACGGTGGAGGGGCAGG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGGGTTCCGCTGTCAGTaGGCGCCCCTGCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEGFRCQ*APLPLR
Trigger: CCTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCC...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCGGCCTTCGGCAGCATTaGGCAGGTCAGGAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGGLRQH*AGQEAP
Trigger: GGGCGCTTCCTGACCTGCGCAATGCTGCCGAAGGCC...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCGCCAGCTCCCGTGAGTaGGACTCCCGGCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCASSRE*DSRLAL
Trigger: CAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGC...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp ATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTaGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: MVAQPGHQTPKH*VPGLRSQNLCH
Trigger: GTGGCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCAGGGCCAGCTCCCGTaGGTGGGACTCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIQGQLP*VGLPAG
Trigger: GCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCACAGTAGTACTGGCTaGCGTCCTCGGTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCHSSTG*RPRWSP
Trigger: GGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTTTGTGGGCAAGTCGTaGCAGGCCCCTCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVFVGKS*QAPQPV
Trigger: CACAGGCTGAGGGGCCTGCCACGACTTGCCCACAAA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCAACCTCGCTGGGTCTaGACTGCTGGCCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHQPRWV*TAGLPS
Trigger: ACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTTG...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGGGTTCCGCTGTCAGTaGGCGCCCCTGCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAGFRCQ*APLPLR
Trigger: CCTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCGTGACTTTGCTCCTCTaGCTGGGGAGCGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCVTLLL*LGSGER
Trigger: CCTTTCCCCGCTCCCCAGGCAGAGGAGCAAAGTCAC...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGAACCCACAGGGGCTCTaGACAAGCGGCGCCCACACA +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLNPQGL*TSGAHT
Trigger: TGTGTGGGCGCCGCTTGTGCAGAGCCCCTGTGGGTT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTGGCTGGCGTCCTCGGTaGAGCCCCCTTTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTGWRPR*SPLWSP
Trigger: GGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCC...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCACCCTCCGGACACATaGGGAAAATGGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVHPPDT*GKWLRG
Trigger: TCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCGAAGTCGCTGGGAGATaGGACAAAGGGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGEVAGR*DKGREG
Trigger: GCCCTCCCTCCCTTTGTCCCATCTCCCAGCGACTTC...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp TGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATaGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: WEDNSSVGVRSQ*LQDADRGVCGD
Trigger: ATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTCAGAATCGCTGTCTTaGGGGGCCAGAGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSESLS*GAREPL
Trigger: CAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATCAACGCCGTCAGGTaGGCAGGAGCCTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGINAVR*AGAWSI
Trigger: AATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGAT...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTCTGGCCAGTACTGGTaGCATTTGGTCCGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGSGQYW*HLVRPR
Trigger: ACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTCCAGTCCTGGGTGCTaGGTGTGCAGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGSSPGC*VCSRRQ
Trigger: TTGCCTCCTACTGCACACTCAGCACCCAGGACTGGA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCGCAGGTTCTAGAGGGTaGCACCAGCAGGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSAGSRG*HQQGSL
Trigger: GAGAGATCCCTGCTGGTGTCACCCTCTAGAACCTGC...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGAGACTGCTCTCAGCTaGGGACAACAGGCAAGAACC +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVETALS*GQQART
Trigger: GGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGGGCTTTCGGATTTCGTaGCGGAGCCGAGGACTTCGC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLGFRIS*RSRGLR
Trigger: GCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCC...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTCTGAACTGCTGGCCTaGCCAGTGGCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGSELLA*PVAEDC
Trigger: GCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTGCAGAAGAGTGGCGTaGCTTTCGGATTTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVCRRVA*LSDFVP
Trigger: CGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGCCAGCTCCCGTGAGTaGGACTCCCGGCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAASSRE*DSRLAL
Trigger: CAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGCAGGGGCCCCTGAGTaGCGATGTACTTGTTCACAA +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVAGAPE*RCTCSQ
Trigger: TTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGATCATCGGGCACACCGTaGTCAGGCCATGCGACGTAC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGSSGTP*SGHATY
Trigger: GTACGTCGCATGGCCTGACCACGGTGTGCCCGATGA...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTCATCGGGCACACCGTaGTCAGGCCATGCGACGTAC +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHSSGTP*SGHATY
Trigger: GTACGTCGCATGGCCTGACCACGGTGTGCCCGATGA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAGAAGTCGCTGGGAGATaGGACAAAGGGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGEVAGR*DKGREG
Trigger: GCCCTCCCTCCCTTTGTCCCATCTCCCAGCGACTTC...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGAAGTCGCTGGGAGATaGGACAAAGGGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGEVAGR*DKGREG
Trigger: GCCCTCCCTCCCTTTGTCCCATCTCCCAGCGACTTC...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTCCAGACCTGTTTTGTaGGCAAGTCGTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSRPVL*ASRGRP
Trigger: GGGCCTGCCACGACTTGCCCACAAAACAGGTCTGGA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTATCAGAATCGCTGTCTTaGGGGGCCAGAGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVSESLS*GAREPL
Trigger: CAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGA...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTTCAGAATCGCTGTCTTaGGGGGCCAGAGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIASESLS*GAREPL
Trigger: CAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGA...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAATCAACGCCGTCAGGTaGGCAGGAGCCTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVINAVR*AGAWSI
Trigger: AATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGAT...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTATCAACGCCGTCAGGTaGGCAGGAGCCTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAINAVR*AGAWSI
Trigger: AATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGAT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAATCAACGCCGTCAGGTaGGCAGGAGCCTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGINAVR*AGAWSI
Trigger: AATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGAT...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAATTCCAGCACTGCAGTaGACTAGGACGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEIPALQ*TRTGSL
Trigger: CAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAAT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAATCCAGTCCTGGGTGCTaGGTGTGCAGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLESSPGC*VCSRRQ
Trigger: TTGCCTCCTACTGCACACTCAGCACCCAGGACTGGA...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGATCCAGTCCTGGGTGCTaGGTGTGCAGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGSSPGC*VCSRRQ
Trigger: TTGCCTCCTACTGCACACTCAGCACCCAGGACTGGA...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCGGTGCGAGGATTGCTTaGGCCCAGGAATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGGARIA*AQEFEA
Trigger: AGCCTCAAATTCCTGGGCTCAAGCAATCCTCGCACC...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCGAGACTGCTCTCAGCTaGGGACAACAGGCAAGAACC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCETALS*GQQART
Trigger: GGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTC...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCATTTGGTCCCCGGTCTaGGGTCACAGAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVIWSPV*GHRIFA
Trigger: GGCAAAGATTCTGTGACCTCAGACCGGGGACCAAAT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCACCGTGGTCAGGCCATaGGACGTACTGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGTVVRP*DVLEMC
Trigger: ACACATCTCCAGTACGTCGCATGGCCTGACCACGGT...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCACCGTGGTCAGGCCATaGGACGTACTGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSTVVRP*DVLEMC
Trigger: ACACATCTCCAGTACGTCGCATGGCCTGACCACGGT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTCAATTGCTCCAGGATaGCGACAGGGGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGSIAPG*RQGCVW
Trigger: CCACACACACCCCTGTCGGCATCCTGGAGCAATTGA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCCAGTGGCAGAAGACTaGTTGCAACCTTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVPVAED*LQPLVG
Trigger: GCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTCTAGACCCAAGCCCTaGCTCTCACAATCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVSRPKP*LSQSFP
Trigger: GGGGAAAGATTGTGAGAGGCAGGGCTTGGGTCTAGA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGGATCTCCGCATGGCTaGGTTCCACACCATCCCGCC +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAGSPHG*VPHHPA
Trigger: GGCGGGATGGTGTGGAACCCAGCCATGCGGAGATCC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTGCAGAAGAGTGGCGTaGCTTTCGGATTTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCCRRVA*LSDFVP
Trigger: CGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAAATGGGCAGGTCGGTGGAGCCCCCTTTaGTCACCCTGTGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: WRAGLAFFGQYPVGKWAGRWSPL*SPCGSH
Trigger: ATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCG...ACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CCA 90 bp CGAAGAATCGCTTCACACACAAACTTGTACTGGCTTGATGTCTGCACCATCATGGGCTGGCGTCCTCGGTaGAGCCCCCTTTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: RRIASHTNLYWLDVCTIMGWRPR*SPLWSP
Trigger: GGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCC...CATGATGGTGCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGCGATTCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCACAGTAGTACTGGCTaGCGTCCTCGGTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTHSSTG*RPRWSP
Trigger: GGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTG...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCACAGTAGTACTGGCTaGCGTCCTCGGTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFHSSTG*RPRWSP
Trigger: GGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCGCAGGGGCCCCTGAGTaGCGATGTACTTGTTCACAA +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGAGAPE*RCTCSQ
Trigger: TTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGC...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCATGTCTGCACCATCATaGCGCGCTGGTCTCGCATTT +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVMSAPS*RAGLAF
Trigger: AAATGCGAGACCAGCGCGCCATGATGGTGCAGACAT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCAATGGAGACCATTGTaGCTGGGGGTGAATGCACAC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCQWRPL*LGVNAH
Trigger: GTGTGCATTCACCCCCAGTCACAATGGTCTCCATTG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGGTGCGAGGATTGCTTaGGCCCAGGAATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEGARIA*AQEFEA
Trigger: AGCCTCAAATTCCTGGGCTCAAGCAATCCTCGCACC...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGGTGGGAAGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHGGKIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCTTCCCACC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCAACCTCGCTGGGTCTaGACTGCTGGCCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEQPRWV*TAGLPS
Trigger: ACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTTG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGAGACTGCTCTCAGCTaGGGACAACAGGCAAGAACC +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHETALS*GQQART
Trigger: GGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCTGCCCTGTCATTACTaGTGGCTCATGTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGLPCHY*WLMLMP
Trigger: GGGCATCAACATGAGCCATCAGTAATGACAGGGCAG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCACACCCAGGTGGTTGTaGACCATATCCAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVTPRWL*TISRRT
Trigger: GGTTCTTCTGGATATGGTGCACAACCACCTGGGTGT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCCTGATGGCTTTGCTTaGTTCCAGCCATCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVPDGFA*FQPSRR
Trigger: TCTCCTAGATGGCTGGAAGCAAGCAAAGCCATCAGG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATACCGTGGTCAGGCCATaGGACGTACTGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHTVVRP*DVLEMC
Trigger: ACACATCTCCAGTACGTCGCATGGCCTGACCACGGT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAATCAATTGCTCCAGGATaGCGACAGGGGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLESIAPG*RQGCVW
Trigger: CCACACACACCCCTGTCGGCATCCTGGAGCAATTGA...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCCCCTGCCCCTTAGCTaGAAACTTTCTGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCPLPLS*KLSGGF
Trigger: GAAACCACCAGAAAGTTTGCAGCTAAGGGGCAGGGG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCCCCCTGCCCCTTAGCTaGAAACTTTCTGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSPLPLS*KLSGGF
Trigger: GAAACCACCAGAAAGTTTGCAGCTAAGGGGCAGGGG...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCCAGTGGCAGAAGACTaGTTGCAACCTTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGPVAED*LQPLVG
Trigger: GCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTCGCTTGCCCTCAAATaGTCATTTCTGAGGTACCCC +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVSLALK*SFLRYP
Trigger: GGGGTACCTCAGAAATGAGCATTTGAGGGCAAGCGA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGCCAGCTCCCGTGAGTaGGACTCCCGGCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEASSRE*DSRLAL
Trigger: CAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTGGGACACATAGGCGATaGTGCAGTCCTCTGACTGAC +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAGTHRR*CSPLTD
Trigger: GTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCC...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAGGCTGCGGCTCACCTaGGTGTTTGTGACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHRLRLT*VFVTSI
Trigger: AATGCTGGTCACAAACACCCAGGTGAGCCGCAGCCT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCGGCCATGCGACGTACTaGAGATGTGTCACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSGHATY*RCVTVC
Trigger: ACACACAGTGACACATCTCCAGTACGTCGCATGGCC...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTGTTCTTCCCCGGTCTaGGTGTTTGTGACCAGCATT +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVCSSPV*VFVTSI
Trigger: AATGCTGGTCACAAACACCCAGACCGGGGAAGAACA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTCTTTGCTCCTCTGCCTaGGGAGCGGGGAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFLCSSA*GAGKGG
Trigger: GCCTCCTTTCCCCGCTCCCCAGGCAGAGGAGCAAAG...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTTTGTGGGCAAGTCGTaGCAGGCCCCTCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAFVGKS*QAPQPV
Trigger: CACAGGCTGAGGGGCCTGCCACGACTTGCCCACAAA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTAGACACCTTCTTGGCTaGGGTACAAACCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIARHLLG*GTNPQV
Trigger: CACCTGGGGGTTTGTACCCCAGCCAAGAAGGTGTCT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGCGGCGCCCACACACTaGCAGGGCCACTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLAAPTH*QGHCSE
Trigger: TTCAGAACAGTGGCCCTGCCAGTGTGTGGGCGCCGC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCCACCAAAGATGGGCTaGTACTATGGGTTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGPPKMG*YYGFRC
Trigger: ACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCACAGCCCACCAAAGATaGGCTGGTACTATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGTAHQR*AGTMGS
Trigger: GGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGT...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCTACGTCTTGACTGGTaGGGGCAATTTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGLRLDW*GQFSAS
Trigger: GCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCTACGTCTTGACTGGTaGGGGCAATTTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCLRLDW*GQFSAS
Trigger: GCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp CAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTaGCCACCTTTACCGAGACTGCTCTCAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QAFGPRSEVTES*PPLPRLLSAED
Trigger: GTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCGGAGCCTGGAGCATTTaGAGATGGAGACACAGAACT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGGAWSI*RWRHRT
Trigger: AGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCC...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGTCATCTAAGAGCTGCTaGTCAACGCCGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLSSKSC*STPSGE
Trigger: CTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGA...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCAGGGCCAGCTCCCGTaGGTGGGACTCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPQGQLP*VGLPAG
Trigger: GCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACTTGAAGTCAGCAAATaGGCGGACAGCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGLEVSK*ADSSPP
Trigger: AGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTATTCCAGCACTGCAGTaGACTAGGACGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTIPALQ*TRTGSL
Trigger: CAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAAT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCATGACCAGAACACACTaGGAGTACCAGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVMTRTH*EYQFSE
Trigger: CTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCAT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTAGATTCAGTAGTCGGTaGTTCCAGTCCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIARFSSR*FQSWVL
Trigger: CAGCACCCAGGACTGGAATCACCGACTACTGAATCT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAAGATTCAGTAGTCGGTaGTTCCAGTCCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGRFSSR*FQSWVL
Trigger: CAGCACCCAGGACTGGAATCACCGACTACTGAATCT...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAAATGGGCAGGTCAATGGAGACCATTGTaGCTGGGGGTGAATGCACAC +
Preference number: 4 (lower is better)
Translates to: WRAGLAFFGQYPVGKWAGQWRPL*LGVNAH
Trigger: GTGTGCATTCACCCCCAGTCACAATGGTCTCCATTG...ACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTCAATGGAGACCATTGTaGCTGGGGGTGAATGCACAC +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAQWRPL*LGVNAH
Trigger: GTGTGCATTCACCCCCAGTCACAATGGTCTCCATTG...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCAGGTTCTAGAGGGTaGCACCAGCAGGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFAGSRG*HQQGSL
Trigger: GAGAGATCCCTGCTGGTGTCACCCTCTAGAACCTGC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCGAAAGACAACTGTGTaGTCCAACCACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGRKTTV*SNHCPL
Trigger: TAGGGGGCAGTGGTTGGATCACACAGTTGTCTTTCG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGCGAAAGACAACTGTGTaGTCCAACCACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLRKTTV*SNHCPL
Trigger: TAGGGGGCAGTGGTTGGATCACACAGTTGTCTTTCG...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAGTTGCCTCTGGAGGATaGAGAGGGCTTTTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGVASGG*RGLFRL
Trigger: CAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAAC...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCAGAATGGCAAATCTTaGCCTCATCTAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCQNGKS*PHLVQP
Trigger: GGGCTGGACTAGATGAGGTCAAGATTTGCCATTCTG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCAGGGCCACTGTTCTaGACACTGTGCCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFAGPLF*TLCQDP
Trigger: TGGATCCTGGCACAGTGTTCAGAACAGTGGCCCTGC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACAGGTAGGTCGCGCGTaGGGGCGGCGCGGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSQVGRA*GRRGSS
Trigger: CGAGCTTCCGCGCCGCCCGCACGCGCGACCTACCTG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCACACATAGGCGATGGTaGAGTCCTCTGACTGACACT +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSTHRRW*SPLTDT
Trigger: AGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAACTGGTTCCTCTTGCTaGTTCCAGAGAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLETGSSC*FQRGLS
Trigger: GGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGACTGGTTCCTCTTGCTaGTTCCAGAGAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLTGSSC*FQRGLS
Trigger: GGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGCTACTGGTTCCTCTTaGTGCTTCCAGAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHATGSS*CFQRGL
Trigger: CAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTCCCCTGCCCCTTAGCTaGAAACTTTCTGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAPLPLS*KLSGGF
Trigger: GAAACCACCAGAAAGTTTGCAGCTAAGGGGCAGGGG...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGATCTAGACCCAAGCCCTaGCTCTCACAATCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGSRPKP*LSQSFP
Trigger: GGGGAAAGATTGTGAGAGGCAGGGCTTGGGTCTAGA...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAAACCCACAGGGGCTCTaGACAAGCGGCGCCCACACA +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAENPQGL*TSGAHT
Trigger: TGTGTGGGCGCCGCTTGTGCAGAGCCCCTGTGGGTT...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGGTGGGGGCAATTTTCTaGCAGCACAGGCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLVGAIF*QHRLSY
Trigger: ATAGGACAGCCTGTGCTGGCAGAAAATTGCCCCCAC...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGGGATCTCCGCATGGCTaGGTTCCACACCATCCCGCC +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLGSPHG*VPHHPA
Trigger: GGCGGGATGGTGTGGAACCCAGCCATGCGGAGATCC...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCATGGAGACACAGAACTaGATGACTTCTGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVMETQN*MTSGSG
Trigger: ACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCAT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCCTTTGGTCACCCTGTaGAAGTCATCTAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCPLVTL*KSSKSC
Trigger: GCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGCTTCGGGGAAAAGCTaGTTCAGTTCATCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVASGKS*FSSSSD
Trigger: GTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTCTTTAGCTGTGCCATaGATCCCTCCAAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGSLAVP*IPPKCP
Trigger: GGGACACTTTGGAGGGATCCATGGCACAGCTAAAGA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTCTTTAGCTGTGCCATaGATCCCTCCAAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCSLAVP*IPPKCP
Trigger: GGGACACTTTGGAGGGATCCATGGCACAGCTAAAGA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTCATCGGGCACACCGTaGTCAGGCCATGCGACGTAC +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLSSGTP*SGHATY
Trigger: GTACGTCGCATGGCCTGACCACGGTGTGCCCGATGA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGAGGACAACAGCTCTGTaGGTGTCCGGTCTCAATTGC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLRTTAL*VSGLNC
Trigger: GCAATTGAGACCGGACACCCACAGAGCTGTTGTCCT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAAGGACAACAGCTCTGTaGGTGTCCGGTCTCAATTGC +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLERTTAL*VSGLNC
Trigger: GCAATTGAGACCGGACACCCACAGAGCTGTTGTCCT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCAACCCTCCAGAAGCTaGGTTTCCCATGGTTCAATT +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVQPSRS*VSHGSI
Trigger: AATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTGCTGGCCTGCCCAGTaGCAGAAGACTGCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASACWPAQ*QKTACN
Trigger: GTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGATCTGGCAGTCCTGGTaGCCCACCAGCTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLIWQSW*PTSSIR
Trigger: TCTTATAGAGCTGGTGGGCCACCAGGACTGCCAGAT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTCCAGACCTGTTTTGTaGGCAAGTCGTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTSRPVL*ASRGRP
Trigger: GGGCCTGCCACGACTTGCCCACAAAACAGGTCTGGA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGCGGCGCCCACACACTaGCAGGGCCACTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEAAPTH*QGHCSE
Trigger: TTCAGAACAGTGGCCCTGCCAGTGTGTGGGCGCCGC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAACAGCCCACCAAAGATaGGCTGGTACTATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLETAHQR*AGTMGS
Trigger: GGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTGGGTCCGCGCTATGTTaGTATAGCAGGATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAGSALC*YSRILL
Trigger: AAGCAGAATCCTGCTATATCAACATAGCGCGGACCC...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGAGACACAGAACTGGATaGCTTCTGGGTCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLRHRTG*LLGQVA
Trigger: AGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTAGACACAGAACTGGATaGCTTCTGGGTCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIARHRTG*LLGQVA
Trigger: AGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTCTGGCCAGTACTGGTaGCATTTGGTCCGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFSGQYW*HLVRPR
Trigger: ACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGTCTGGCCAGTACTGGTaGCATTTGGTCCGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEESGQYW*HLVRPR
Trigger: ACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGA...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGATGGTGCAGTCCTCTaGCTGACACTGGATGTGAAA +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHDGAVL*LTLDVK
Trigger: TTTCACATCCAGTGTCAGTCAGAGGACTGCACCATC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTATTCCAGCACTGCAGTaGACTAGGACGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLIPALQ*TRTGSL
Trigger: CAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAAT...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCATGACCAGAACACACTaGGAGTACCAGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSMTRTH*EYQFSE
Trigger: CTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCAT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGGTGCGAGGATTGCTTaGGCCCAGGAATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAGARIA*AQEFEA
Trigger: AGCCTCAAATTCCTGGGCTCAAGCAATCCTCGCACC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCAAGAAAACTCAGGGTTaGGGGCAACATATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVKKTQG*GQHILP
Trigger: AGGCAAGATATGTTGCCCTCAACCCTGAGTTTTCTT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTACAGAATGGCAAATCTTaGCCTCATCTAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVQNGKS*PHLVQP
Trigger: GGGCTGGACTAGATGAGGTCAAGATTTGCCATTCTG...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACAGAATGGCAAATCTTaGCCTCATCTAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGQNGKS*PHLVQP
Trigger: GGGCTGGACTAGATGAGGTCAAGATTTGCCATTCTG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCAAGTCTCAGAAATGTaGCATGTCTCTGTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCQVSEM*HVSVAA
Trigger: GGCTGCTACAGAGACATGTCACATTTCTGAGACTTG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACCTGATGGCTTTGCTTaGTTCCAGCCATCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEPDGFA*FQPSRR
Trigger: TCTCCTAGATGGCTGGAAGCAAGCAAAGCCATCAGG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTAACCTGCCAAAACTGTaGACAGGTATGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASANLPKL*TGMRQG
Trigger: CCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTACACATAGGCGATGGTaGAGTCCTCTGACTGACACT +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGTHRRW*SPLTDT
Trigger: AGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGT...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGGTGTCCGGTCTCAATTaGTCCAGGATGCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEVSGLN*SRMPTG
Trigger: CCCTGTCGGCATCCTGGAGCAATTGAGACCGGACAC...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTCTGAACTGCTGGCCTaGCCAGTGGCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLSELLA*PVAEDC
Trigger: GCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGTCGCTTGCCCTCAAATaGTCATTTCTGAGGTACCCC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLSLALK*SFLRYP
Trigger: GGGGTACCTCAGAAATGAGCATTTGAGGGCAAGCGA...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTTTCCCCATTTCTGCTaGCTCTTTGTTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSFPHFC*LFVASG
Trigger: TCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAAA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGCTCCAAGCTGAATTCTaGACTCATCTCTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLLQAEF*THLWAT
Trigger: GGTTGCCCAGAGATGAGTGCAGAATTCAGCTTGGAG...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTACGCTCTGCAAAGCTaGCCTGTCATTACTGATGGC +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGYALQS*PVITDG
Trigger: GCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTGCTACCTTACGCTCTaGAAAGCTGCCCTGTCATTA +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGCYLTL*KAALSL
Trigger: TAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTGCAGAAGAGTGGCGTaGCTTTCGGATTTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTCRRVA*LSDFVP
Trigger: CGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACCTTTGGTCACCCTGTaGAAGTCATCTAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGPLVTL*KSSKSC
Trigger: GCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCGGTGGAGCCCCCTTTaGTCACCCTGTGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEERWSPL*SPCGSH
Trigger: ATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCACCCTCCGGACACATaGGGAAAATGGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEHPPDT*GKWLRG
Trigger: TCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTCTTTAGCTGTGCCATaGATCCCTCCAAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGSLAVP*IPPKCP
Trigger: GGGACACTTTGGAGGGATCCATGGCACAGCTAAAGA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTGCAGGGGCCCCTGAGTaGCGATGTACTTGTTCACAA +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTAGAPE*RCTCSQ
Trigger: TTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGC...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTCGGACAATATCCAGTaGGTAAATGGGCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCSDNIQ*VNGQVP
Trigger: AGGAACCTGCCCATTTACCCACTGGATATTGTCCGA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAACACCATCTTGTTGCTaGGAGGACAACAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGTPSCC*EDNSSV
Trigger: CACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGT...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGATGGGCTGGTACTATaGGTTCCGCTGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFDGLVL*VPLSVS
Trigger: GCTCACTGACAGCGGAACCCATAGTACCAGCCCATC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGATGGGCTGGTACTATaGGTTCCGCTGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASADGLVL*VPLSVS
Trigger: GCTCACTGACAGCGGAACCCATAGTACCAGCCCATC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCAGTAGCTTCTTTGCCTaGAAGAACGTATGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSSFFA*KNVWCS
Trigger: TGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCCCATAGTCCAGTACTaGGACAGAACATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCPIVQY*DRTFFS
Trigger: GGAAAAGAATGTTCTGTCTCAGTACTGGACTATGGG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTCATCTAAGAGCTGCTaGTCAACGCCGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTSSKSC*STPSGE
Trigger: CTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCACAAGAGGCATCTTTTaGTCCACTCCTCCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSTRGIF*STPPLR
Trigger: TCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGCACACCTAGAAGCGTaGCCACCTGGGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSAHLEA*PPGMTV
Trigger: CACTGTCATCCCAGGTGGTCACGCTTCTAGGTGTGC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp CGAAGAATCGCTTCACACACAAACTTGTACTGGCTTGATGTCTGCACCATCATGATTCCAGCACTGCAGTaGACTAGGACGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RRIASHTNLYWLDVCTIMIPALQ*TRTGSL
Trigger: CAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAAT...CATGATGGTGCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGCGATTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAATGACCAGAACACACTaGGAGTACCAGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGMTRTH*EYQFSE
Trigger: CTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCAT...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTCAAGTGGAGGAGCTTaGAGTAGCAGCAATACATGT +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSSGGA*SSSNTC
Trigger: ACATGTATTGCTGCTACTTCAAGCTCCTCCACTTGA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGTGAAACAGGAATCTTaGGCTACGGATTTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVVKQES*ATDFKW
Trigger: CCACTTAAAATCCGTAGCTCAAGATTCCTGTTTCAC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGTTGCCTCTGGAGGATaGAGAGGGCTTTTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFVASGG*RGLFRL
Trigger: CAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAAC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTCAAGTCTCAGAAATGTaGCATGTCTCTGTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAQVSEM*HVSVAA
Trigger: GGCTGCTACAGAGACATGTCACATTTCTGAGACTTG...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTATTTGGTCCCCGGTCTaGGGTCACAGAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAIWSPV*GHRIFA
Trigger: GGCAAAGATTCTGTGACCTCAGACCGGGGACCAAAT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAACCCGGGCTTTCATTaGCAAGCTCAGCTAATCAGT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHNPGFH*QAQLIS
Trigger: ACTGATTAGCTGAGCTTGTCAATGAAAGCCCGGGTT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACTACCCACAATGTATTaGACACCTGGCCTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLELPTMY*TPGLER
Trigger: TCTCTCAAGGCCAGGTGTTCAATACATTGTGGGTAG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGGTACAAACCCCCAGGTaGGCATTCTGTGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEVQTPR*AFCVPG
Trigger: TCCTGGGACACAGAATGCTCACCTGGGGGTTTGTAC...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTTTAGCCCACTGTGCTaGTCATGCAGAGATTCGACT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHFSPLC*SCRDST
Trigger: AGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGATGTTTTAGCCCACTGTaGTGCTCATGCAGAGATTCG +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGCFSPL*CSCRDS
Trigger: CGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACA...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAATCACCACTTGGTCATaGGTGTGTTCTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEITTWS*VCSEMS
Trigger: GGACATCTCAGAACACACGCATGACCAAGTGGTGAT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGCTACTGGTTCCTCTTaGTGCTTCCAGAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAATGSS*CFQRGL
Trigger: CAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTCAATTGCTCCAGGATaGCGACAGGGGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLSIAPG*RQGCVW
Trigger: CCACACACACCCCTGTCGGCATCCTGGAGCAATTGA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGAGGGCAGAGAGGTGTTaGTCAGCCTTCAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLRAERC*SAFSLT
Trigger: GGTCAGGCTGAAGGCTGAGCAACACCTCTCTGCCCT...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCACTTTGCAAGCATTTTaGACACAGGGTGATGATGCA +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVTLQAF*TQGDDA
Trigger: TGCATCATCACCCTGTGTGCAAAATGCTTGCAAAGT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGTCTGAACTGCTGGCCTaGCCAGTGGCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLSELLA*PVAEDC
Trigger: GCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGA...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTTTCCCCATTTCTGCTaGCTCTTTGTTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGFPHFC*LFVASG
Trigger: TCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAAA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATCTTTCCCCATTTCTaGTGCCTCTTTGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGIFPHF*CLFVAS
Trigger: AGAGGCAACAAAGAGGCAGCAGAAATGGGGAAAGAT...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGAGGTCACAGAATCTTTaGCACCTTTACCGAGACTGC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLRSQNL*HLYRDC
Trigger: GCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTAGGTCACAGAATCTTTaGCACCTTTACCGAGACTGC +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIARSQNL*HLYRDC
Trigger: GCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCGGCCTTCGGCAGCATTaGGCAGGTCAGGAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPGLRQH*AGQEAP
Trigger: GGGCGCTTCCTGACCTGCGCAATGCTGCCGAAGGCC...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGTGGGGGCAATTTTCTaGCAGCACAGGCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFVGAIF*QHRLSY
Trigger: ATAGGACAGCCTGTGCTGGCAGAAAATTGCCCCCAC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGTGCTACCTTACGCTCTaGAAAGCTGCCCTGTCATTA +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLCYLTL*KAALSL
Trigger: TAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCA...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTGTCCAAGGTATCAGGTaGTACCTTACGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAVQGIR*YLTLCK
Trigger: TTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGAC...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCAGAAATACAAGTGCCTaGTTTGTTCTTGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVRNTSA*FVLAAV
Trigger: CACTGCAGCAAGAACAAACCAGGCACTTGTATTTCT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGAGAAGGCAGACTCTTaGTTTCTAAGTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEEKADS*FLSAPL
Trigger: CAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTC...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGATTATCTGCAGAAGAGTaGCGTGGCTTTCGGATTTCG +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGLSAEE*RGFRIS
Trigger: CGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAA...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAGGCTGGCGTCCTCGGTaGAGCCCCCTTTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQGWRPR*SPLWSP
Trigger: GGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCC...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAGCTTCGGGGAAAAGCTaGTTCAGTTCATCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGASGKS*FSSSSD
Trigger: GTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGC...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCACCCTCCGGACACATaGGGAAAATGGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSHPPDT*GKWLRG
Trigger: TCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGCAATAATACCCGGGTaGTGTCATAAGGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGAIIPG*CHKAAH
Trigger: ATGTGCTGCCTTATGACACCACCCGGGTATTATTGC...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGGACACATAGGCGATaGTGCAGTCCTCTGACTGAC +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLGTHRR*CSPLTD
Trigger: GTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTGGCCATGCGACGTACTaGAGATGTGTCACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTGHATY*RCVTVC
Trigger: ACACACAGTGACACATCTCCAGTACGTCGCATGGCC...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTATGTCTGCACCATCATaGCGCGCTGGTCTCGCATTT +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAMSAPS*RAGLAF
Trigger: AAATGCGAGACCAGCGCGCCATGATGGTGCAGACAT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTAATATTGGAAGTCGCTaGGAGATGGGACAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGNIGSR*EMGQRE
Trigger: CTCCCTTTGTCCCATCTCCCAGCGACTTCCAATATT...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTAATATTGGAAGTCGCTaGGAGATGGGACAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIANIGSR*EMGQRE
Trigger: CTCCCTTTGTCCCATCTCCCAGCGACTTCCAATATT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGTGCTGGCCTGCCCAGTaGCAGAAGACTGCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLCWPAQ*QKTACN
Trigger: GTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCA...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCAGAAACAGCAGTTGTaGAGGCTCACAATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCQKQQL*RLTMKK
Trigger: CTTCTTCATTGTGAGCCTCCACAACTGCTGTTTCTG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCCACCAAAGATGGGCTaGTACTATGGGTTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFPPKMG*YYGFRC
Trigger: ACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp AACATCCAAATGACCCAAGATAACCACACCATCTTGTaGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: NIQMTQDNHTIL*LGGQQLCGCPV
Trigger: GACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTTATCTTGGGTCATTTGGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp CAGGGTTTCCTTAGCATCAGGGCGGGTGAATCTGAATaGTTCCAGCTCCACCTAGAAGCACAGAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QGFLSIRAGESE*FQLHLEAQKAQ
Trigger: CTGAGCTTTCTGTGCTTCTAGGTGGAGCTGGAACAATTCAGATTCACCCGCCCTGATGCTAAGGAAACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGGTCATAACTATCGCTaGATAACCTGCAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAGHNYR*ITCSIR
Trigger: CCGGATGCTGCAGGTTATTCAGCGATAGTTATGACC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAGGTAATTCAGCATGTTaGAGGCCACAATATGTTCCC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGGNSAC*RPQYVP
Trigger: GGGAACATATTGTGGCCTTCAACATGCTGAATTACC...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGTAATTCAGCATGTTaGAGGCCACAATATGTTCCC +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGGNSAC*RPQYVP
Trigger: GGGAACATATTGTGGCCTTCAACATGCTGAATTACC...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTAGTAGCTTCTTTGCCTaGAAGAACGTATGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIASSFFA*KNVWCS
Trigger: TGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAGTAGCTTCTTTGCCTaGAAGAACGTATGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHSSFFA*KNVWCS
Trigger: TGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCAGAACATTCTTTTCCTaGGGTAGTAGCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCRTFFS*GSSFFA
Trigger: GGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCT...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCAGAACATTCTTTTCCTaGGGTAGTAGCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGRTFFS*GSSFFA
Trigger: GGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCT...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACCCATAGTCCAGTACTaGGACAGAACATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEPIVQY*DRTFFS
Trigger: GGAAAAGAATGTTCTGTCTCAGTACTGGACTATGGG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACCCATAGTCCAGTACTaGGACAGAACATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGPIVQY*DRTFFS
Trigger: GGAAAAGAATGTTCTGTCTCAGTACTGGACTATGGG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTGCGGGCTTCGGTTCTaGGAAACTTCAGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFCGLRF*ETSESL
Trigger: CAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCAGACACAGAACTGGATaGCTTCTGGGTCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFRHRTG*LLGQVA
Trigger: AGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCT...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGGAGCCTGGAGCATTTaGAGATGGAGACACAGAACT +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAGAWSI*RWRHRT
Trigger: AGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTCATCTAAGAGCTGCTaGTCAACGCCGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLSSKSC*STPSGE
Trigger: CTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTGTCATGCGTGTGTTCTaGGATGTCCCGGCCATTGAT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIVMRVF*DVPAID
Trigger: ATCAATGGCCGGGACATCTCAGAACACACGCATGAC...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCTTGAAGTCAGCAAATaGGCGGACAGCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLILEVSK*ADSSPP
Trigger: AGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGTTCATCTTCAGACTTaGAGTCAGCAAATGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGVHLQT*SQQMSG
Trigger: TCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAAC...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTGCAGCTTTGCAAACGTaGTGGCCAAACCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTAALQT*WPNLAF
Trigger: AAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGC...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTTTTTGTCCAAATTTTaGGGCAGCTTTGCAAACGTG +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVFLSKF*GSFANV
Trigger: CACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTAGATTCAGTAGTCGGTaGTTCCAGTCCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLRFSSR*FQSWVL
Trigger: CAGCACCCAGGACTGGAATCACCGACTACTGAATCT...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGCATTGTGACTGGGGGTaGATGCACACATTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLHCDWG*MHTFVL
Trigger: AAGAACAAATGTGTGCATTCACCCCCAGTCACAATG...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTCTGATCCTCTCCTTTaGAATGCAATGGAGACCATT +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSDPLL*NAMETI
Trigger: AATGGTCTCCATTGCATTTCAAAGGAGAGGATCAGA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAAATTTGAGGCTGCAGTaGACAATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLENLRLQ*TMIMPL
Trigger: CAGTGGCATGATCATTGTTCACTGCAGCCTCAAATT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGGTGGGAAGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEGGKIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCTTCCCACC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTCGAAAGACAACTGTGTaGTCCAACCACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFRKTTV*SNHCPL
Trigger: TAGGGGGCAGTGGTTGGATCACACAGTTGTCTTTCG...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGGTTGCCTCTGGAGGATaGAGAGGGCTTTTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEVASGG*RGLFRL
Trigger: CAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAAC...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGTTGCCTCTGGAGGATaGAGAGGGCTTTTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLVASGG*RGLFRL
Trigger: CAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAAC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAAAGAAAACTCAGGGTTaGGGGCAACATATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGKKTQG*GQHILP
Trigger: AGGCAAGATATGTTGCCCTCAACCCTGAGTTTTCTT...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAAGAAAACTCAGGGTTaGGGGCAACATATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHKKTQG*GQHILP
Trigger: AGGCAAGATATGTTGCCCTCAACCCTGAGTTTTCTT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGAGACTGCTCTCAGCTaGGGACAACAGGCAAGAACC +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSETALS*GQQART
Trigger: GGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGCGGTCTGGGTGTTTGTaGCCAGCATTTCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLRSGCL*PAFLGT
Trigger: TGTCCCGAGAAATGCTGGTCACAAACACCCAGACCG...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTTGAGTCCAGGAGTTTaGGGCCAGTCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLILSPGV*GQSGQH
Trigger: ATGTTGCCCAGACTGGCCTCAAACTCCTGGACTCAA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCTCCATTTTTACAGATaGCAAAATCGGAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVLHFYR*QNRSSD
Trigger: ATCTGAGCTCCGATTTTGTCATCTGTAAAAATGGAG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATATTGTCTGGCCAAGATaGCAAAAGGGAAACCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHIVWPR*QKGNLL
Trigger: CAAGAGGTTTCCCTTTTGTCATCTTGGCCAGACAAT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGATGCGGCATACATGTaGCACTTGGCCACTAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEDAAYM*HLATSS
Trigger: GGAGCTAGTGGCCAAGTGTCACATGTATGCCGCATC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCCAGGACCTCCAAGCTaGATTCTGCACTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIPGPPS*ILHSSL
Trigger: CAGAGATGAGTGCAGAATTCAGCTTGGAGGTCCTGG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCATTAGGTCTAAATTGTaGAGATCCCTACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSIRSKL*RSLPLC
Trigger: GCACAGTGGTAGGGATCTGCACAATTTAGACCTAAT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGGCTACTGGTTCCTCTTaGTGCTTCCAGAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEATGSS*CFQRGL
Trigger: CAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGC...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAGTGACTGGGGGTGAATaGACACATTTGTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVVTGGE*THLFFH
Trigger: ATGGAAGAACAAATGTGTGCATTCACCCCCAGTCAC...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR GCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGTGACTGGGGGTGAATaGACACATTTGTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEVTGGE*THLFFH
Trigger: ATGGAAGAACAAATGTGTGCATTCACCCCCAGTCAC...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCACTTTGCAAGCATTTTaGACACAGGGTGATGATGCA +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGTLQAF*TQGDDA
Trigger: TGCATCATCACCCTGTGTGCAAAATGCTTGCAAAGT...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCCAGTGGCAGAAGACTaGTTGCAACCTTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEPVAED*LQPLVG
Trigger: GCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCCAGTGGCAGAAGACTaGTTGCAACCTTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLPVAED*LQPLVG
Trigger: GCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTATCTTTCCCCATTTCTaGTGCCTCTTTGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAIFPHF*CLFVAS
Trigger: AGAGGCAACAAAGAGGCAGCAGAAATGGGGAAAGAT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCACCTTTACCGAGACTaGTCTCAGCTGAGGACAACA +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFHLYRD*SQLRTT
Trigger: TGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCACCCAAGCTCCATCTaGATGAAGTTGCTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGHPSSI*MKLLKG
Trigger: TCCTTTTAGCAACTTCATGCAGATGGAGCTTGGGTG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTACGCTCTGCAAAGCTaGCCTGTCATTACTGATGGC +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTYALQS*PVITDG
Trigger: GCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGGGCTGGCGTCCTCGGTaGAGCCCCCTTTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLGWRPR*SPLWSP
Trigger: GGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCC...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGATATCCAGTGGGTAAATaGGCAGGTTCCTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGYPVGK*AGSSQL
Trigger: TAACTGAGAGGAACCTGCCCATTTACCCACTGGATA...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTACCATCATGGCGCGCTaGTCTCGCATTTTTCGGACA +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLTIMAR*SRIFRT
Trigger: TGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGT...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTATGTCTGCACCATCATaGCGCGCTGGTCTCGCATTT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIMSAPS*RAGLAF
Trigger: AAATGCGAGACCAGCGCGCCATGATGGTGCAGACAT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCTTTCCCACAGCTACTaGTTCCTCTTGCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFLSHSY*FLLLLP
Trigger: TGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTACACCATCTTGTTGCTaGGAGGACAACAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTTPSCC*EDNSSV
Trigger: CACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTGTCCCATCTCCCCTTaGGAAAATCATAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGCPISP*ENHKVS
Trigger: TGAAACCTTATGATTTTCCCAAGGGGAGATGGGACA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTCCATCCCCCTTTCTTaGAGCTTGCTGAATTTTTGT +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCSIPLS*SLLNFC
Trigger: ACAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAAATGGGCAGGTATCAGCCTCCCAGAATaGCAAATCTTGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: WRAGLAFFGQYPVGKWAGISLPE*QILTSS
Trigger: AGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGAT...ACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTATCAGCCTCCCAGAATaGCAAATCTTGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAISLPE*QILTSS
Trigger: AGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGAT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACAGAAACAGCAGTTGTaGAGGCTCACAATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEQKQQL*RLTMKK
Trigger: CTTCTTCATTGTGAGCCTCCACAACTGCTGTTTCTG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCTGAGCAGGGATGAATaGGGTGGAAACAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSLSRDE*GGNSPP
Trigger: TGGTGGGCTGTTTCCACCCCATTCATCCCTGCTCAG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGCCCTACGTCTTGACTaGTGGGGGCAATTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEALRLD*WGQFSA
Trigger: GGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp CAAAACATCCAAATGACCCAAGATAACCACACCATCTaGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: QNIQMTQDNHTI*LLGGQQLCGCP
Trigger: CGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTTATCTTGGGTCATTTGGATGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGTCATAACTATCGCTaGATAACCTGCAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLGHNYR*ITCSIR
Trigger: CCGGATGCTGCAGGTTATTCAGCGATAGTTATGACC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAAGAACATTCTTTTCCTaGGGTAGTAGCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLERTFFS*GSSFFA
Trigger: GGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCATCTTCCGTTTCCGTaGTGTAGGTCATTTCATTTG +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGHLPFP*CRSFHL
Trigger: CAAATGAAATGACCTACATCACGGAAACGGAAGATG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGTGCGGGCTTCGGTTCTaGGAAACTTCAGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLCGLRF*ETSESL
Trigger: CAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCA...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGAGACACAGAACTGGATaGCTTCTGGGTCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEERHRTG*LLGQVA
Trigger: AGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCT...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTAGATGTCCCGGCCATTaGTTAACACGATTTGATCCC +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASARCPGH*LTRFDP
Trigger: GGGATCAAATCGTGTTAATCAATGGCCGGGACATCT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGTCATGCGTGTGTTCTaGGATGTCCCGGCCATTGAT +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSVMRVF*DVPAID
Trigger: ATCAATGGCCGGGACATCTCAGAACACACGCATGAC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTGATGGTGCAGTCCTCTaGCTGACACTGGATGTGAAA +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIDGAVL*LTLDVK
Trigger: TTTCACATCCAGTGTCAGTCAGAGGACTGCACCATC...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCTTGGGAAAGAGGAATaGACTTTTTCACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGLGKEE*TFSQLS
Trigger: AGACAACTGTGAAAAAGTTCATTCCTCTTTCCCAAG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCTTGGGAAAGAGGAATaGACTTTTTCACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCLGKEE*TFSQLS
Trigger: AGACAACTGTGAAAAAGTTCATTCCTCTTTCCCAAG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGTCAGCCCTTACAGTCTaGCACACAGAAACAAACAAA +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLSALTV*HTETNK
Trigger: TTTGTTTGTTTCTGTGTGTCAGACTGTAAGGGCTGA...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTATGACCAGAACACACTaGGAGTACCAGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAMTRTH*EYQFSE
Trigger: CTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCAT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTACTCAACGGTAATTTaGATCGTTAGGAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCYSTVI*IVRNPE
Trigger: CTCAGGATTCCTAACGATTCAAATTACCGTTGAGTA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTCTGATCCTCTCCTTTaGAATGCAATGGAGACCATT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHSDPLL*NAMETI
Trigger: AATGGTCTCCATTGCATTTCAAAGGAGAGGATCAGA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCTTTACTTCCTCTTCTaGGTACATAAAAACCGCTGT +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGLYFLF*VHKNRC
Trigger: ACAGCGGTTTTTATGTACTCAGAAGAGGAAGTAAAG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCAACCTCGCTGGGTCTaGACTGCTGGCCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPQPRWV*TAGLPS
Trigger: ACTGGGCAGGCCAGCAGTTCAGACCCAGCGAGGTTG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGTGAAACAGGAATCTTaGGCTACGGATTTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEVKQES*ATDFKW
Trigger: CCACTTAAAATCCGTAGCTCAAGATTCCTGTTTCAC...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACGAAAGACAACTGTGTaGTCCAACCACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAERKTTV*SNHCPL
Trigger: TAGGGGGCAGTGGTTGGATCACACAGTTGTCTTTCG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGCTGCCCTGTCATTACTaGTGGCTCATGTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLLPCHY*WLMLMP
Trigger: GGGCATCAACATGAGCCATCAGTAATGACAGGGCAG...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAATCTTACTCGAAAATaGAGGGTACAGGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHNLTRK*RVQGKP
Trigger: AGGTTTCCCCTGTACCCTGCATTTTCGAGTAAGATT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTGTAAGAAATACAAGTaGCTGGTTTGTTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSCKKYK*LVCSCC
Trigger: GCAGCAAGAACAAACCAGGCACTTGTATTTCTTACA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTTTAGCCCACTGTGCTaGTCATGCAGAGATTCGACT +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAFSPLC*SCRDST
Trigger: AGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTTTAGCCCACTGTGCTaGTCATGCAGAGATTCGACT +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTFSPLC*SCRDST
Trigger: AGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGATTAGGTCTAAATTGTaGAGATCCCTACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLIRSKL*RSLPLC
Trigger: GCACAGTGGTAGGGATCTGCACAATTTAGACCTAAT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTATTAGGTCTAAATTGTaGAGATCCCTACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGIRSKL*RSLPLC
Trigger: GCACAGTGGTAGGGATCTGCACAATTTAGACCTAAT...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACTCTTGGTTTCTAAGTaGTCCACTGATAAGGATCTC +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLELLVSK*STDKDL
Trigger: GAGATCCTTATCAGTGGAGCACTTAGAAACCAAGAG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTACACATAGGCGATGGTaGAGTCCTCTGACTGACACT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFTHRRW*SPLTDT
Trigger: AGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CGAAGAATCGCTTCACACACAAACTTGTACTGGCTTGATGTCTGCACCATCATGCAGGTGCAAACAGAGTaGACACCTAGAAGCGTGACC +
Preference number: 4 (lower is better)
Translates to: RRIASHTNLYWLDVCTIMQVQTE*TPRSVT
Trigger: GGTCACGCTTCTAGGTGTGCACTCTGTTTGCACCTG...CATGATGGTGCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGCGATTCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR GCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGGTCTTCATCCGTCTTaGTACCAGCAAACTATTCAA +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEGLHPS*YQQTIQ
Trigger: TTGAATAGTTTGCTGGTAGCAAGACGGATGAAGACC...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGGTCTTCATCCGTCTTaGTACCAGCAAACTATTCAA +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHGLHPS*YQQTIQ
Trigger: TTGAATAGTTTGCTGGTAGCAAGACGGATGAAGACC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTCTCCCTCCCACCTCTaGCATTTAGCAGTAAAATAT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHSPSHL*HLAVKY
Trigger: ATATTTTACTGCTAAATGGCAGAGGTGGGAGGGAGA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCCCCTGCCCCTTAGCTaGAAACTTTCTGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSPLPLS*KLSGGF
Trigger: GAAACCACCAGAAAGTTTGCAGCTAAGGGGCAGGGG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTGTGACCGTAATGGCTaGATTTCTGCAACCATAATA +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSCDRNG*ISATII
Trigger: TATTATGGTTGCAGAAATGCAGCCATTACGGTCACA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTATCTTCTCCATTCATATaGAGCCAAATTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVSSPFI*SQISQA
Trigger: TGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGA...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR GCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTAGGTCACAGAATCTTTaGCACCTTTACCGAGACTGC +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTRSQNL*HLYRDC
Trigger: GCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATATCCAGAAGAACCTaGCCAGTGTCTTGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGISRRT*PVSCLV
Trigger: TACTAAACAAGACACTGGCCAGGTTCTTCTGGATAT...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAGAAATACAAGTGCCTaGTTTGTTCTTGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHRNTSA*FVLAAV
Trigger: CACTGCAGCAAGAACAAACCAGGCACTTGTATTTCT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCATAAGGATCTCCGCATaGCTGGGTTCCACACCATCC +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSIRISA*LGSTPS
Trigger: GGATGGTGTGGAACCCAGCCATGCGGAGATCCTTAT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCCTTTGGTCACCCTGTaGAAGTCATCTAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLPLVTL*KSSKSC
Trigger: GCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTTTTCCATCTTCATCTaGTGTGATACGGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGFSIFI*CDTDQD
Trigger: GTCTTGATCCGTATCACACCAGATGAAGATGGAAAA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCACCATCATGGCGCGCTaGTCTCGCATTTTTCGGACA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSTIMAR*SRIFRT
Trigger: TGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCTAGGATCCAGCATTTaGACTAAACCTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGLGSSI*TKPSSY
Trigger: GTATGAAGAAGGTTTAGTCCAAATGCTGGATCCTAG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCCTAGGATCCAGCATTTaGACTAAACCTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSLGSSI*TKPSSY
Trigger: GTATGAAGAAGGTTTAGTCCAAATGCTGGATCCTAG...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCTTTCCCACAGCTACTaGTTCCTCTTGCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLILSHSY*FLLLLP
Trigger: TGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGACACCATCTTGTTGCTaGGAGGACAACAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEETPSCC*EDNSSV
Trigger: CACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGT...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTAATATTGGAAGTCGCTaGGAGATGGGACAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASANIGSR*EMGQRE
Trigger: CTCCCTTTGTCCCATCTCCCAGCGACTTCCAATATT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTATTCAATATGGGGTTATaGTACTGTGTGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVFNMGL*YCVTSP
Trigger: GGGAGATGTCACACAGTACCATAACCCCATATTGAA...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCCTCTTTGTTGCCTCTaGAGGATGAAGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFPLCCL*RMKRAF
Trigger: AAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTGTTCTTCCCCGGTCTaGGTGTTTGTGACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLICSSPV*VFVTSI
Trigger: AATGCTGGTCACAAACACCCAGACCGGGGAAGAACA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCATCTGGCAGTCCTGGTaGCCCACCAGCTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSIWQSW*PTSSIR
Trigger: TCTTATAGAGCTGGTGGGCCACCAGGACTGCCAGAT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTATATCTGGCAGTCCTaGTGGCCCACCAGCTCTATA +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFYIWQS*WPTSSI
Trigger: TATAGAGCTGGTGGGCCACCAGGACTGCCAGATATA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCAGGAACTACAAAGCTaGGGTAAGATAACTATGTTC +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGQELQS*GKITMF
Trigger: GAACATAGTTATCTTACCCCAGCTTTGTAGTTCCTG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTCCGGGCTTTGTACATaGTACTACTTTGTAACTTTC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSGLCT*YYFVTF
Trigger: GAAAGTTACAAAGTAGTACCATGTACAAAGCCCGGA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTGTGTCCCAGGAACTGTaGGTGCATGAGCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIVSQEL*VHEQKH
Trigger: ATGCTTTTGCTCATGCACCCACAGTTCCTGGGACAC...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTGTGTCCCAGGAACTGTaGGTGCATGAGCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFVSQEL*VHEQKH
Trigger: ATGCTTTTGCTCATGCACCCACAGTTCCTGGGACAC...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGTGAAGACACCTTCTTaGCTGGGGTACAAACCCCCA +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEVKTPS*LGYKPP
Trigger: TGGGGGTTTGTACCCCAGCCAAGAAGGTGTCTTCAC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGTTGATTAACACGATTTaGTCCCCTTCGTTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLLINTI*SPSFSL
Trigger: TAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAA...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTTGATTAACACGATTTaGTCCCCTTCGTTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGLINTI*SPSFSL
Trigger: TAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTTTTTTGTCCAAATTTTaGGGCAGCTTTGCAAACGTG +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAFLSKF*GSFANV
Trigger: CACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAA...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAATTTTTGTCCAAATTTTaGGGCAGCTTTGCAAACGTG +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEFLSKF*GSFANV
Trigger: CACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAA...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGATGGTGCAGTCCTCTaGCTGACACTGGATGTGAAA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSDGAVL*LTLDVK
Trigger: TTTCACATCCAGTGTCAGTCAGAGGACTGCACCATC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCTTGGGAAAGAGGAATaGACTTTTTCACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHLGKEE*TFSQLS
Trigger: AGACAACTGTGAAAAAGTTCATTCCTCTTTCCCAAG...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTCTTGGGAAAGAGGAATaGACTTTTTCACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIALGKEE*TFSQLS
Trigger: AGACAACTGTGAAAAAGTTCATTCCTCTTTCCCAAG...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGGACAGGCCCCAAACTaGGATCCTTTTTGTATCTTT +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFGQAPN*DPFCIF
Trigger: AAAGATACAAAAAGGATCTCAGTTTGGGGCCTGTCC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTAACAAAACATCCAAATaGCCCAAGATAACCACACCA +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIANKTSK*PKITTP
Trigger: TGGTGTGGTTATCTTGGGTCATTTGGATGTTTTGTT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTCCAGTCCTGGGTGCTaGGTGTGCAGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPSSPGC*VCSRRQ
Trigger: TTGCCTCCTACTGCACACTCAGCACCCAGGACTGGA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTCAAGTGGAGGAGCTTaGAGTAGCAGCAATACATGT +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASASSGGA*SSSNTC
Trigger: ACATGTATTGCTGCTACTTCAAGCTCCTCCACTTGA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGTACTCAACGGTAATTTaGATCGTTAGGAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLYSTVI*IVRNPE
Trigger: CTCAGGATTCCTAACGATTCAAATTACCGTTGAGTA...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTATATTCAGATAGTCTaGTCCTCTCCTTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSYIQIV*SSPLKC
Trigger: GCATTTCAAAGGAGAGGATCAGACTATCTGAATATA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAGGGATCTCTCATCTTaGTTAAATTGGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHRDLSS*LNWHIN
Trigger: GTTGATGTGCCAATTTAATCAAGATGAGAGATCCCT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACAGAATGGCAAATCTTaGCCTCATCTAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEQNGKS*PHLVQP
Trigger: GGGCTGGACTAGATGAGGTCAAGATTTGCCATTCTG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTAACCCGGGCTTTCATTaGCAAGCTCAGCTAATCAGT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFNPGFH*QAQLIS
Trigger: ACTGATTAGCTGAGCTTGTCAATGAAAGCCCGGGTT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCTGGTTTGTTCTTGCTaGAGTGTGTTGGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLILVCSC*SVLGSG
Trigger: ACCTGATCCCAACACACTGCAGCAAGAACAAACCAG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTGCCTGGTTTGTTCTTaGTGCAGTGTGTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLICLVCS*CSVLGS
Trigger: TGATCCCAACACACTGCAGCAAGAACAAACCAGGCA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGTGTTTTAGCCCACTGTaGTGCTCATGCAGAGATTCG +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEECFSPL*CSCRDS
Trigger: CGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACA...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCGCCAATCACCTTTTTaGAATATTGGTTATTTACCG +
Preference number: 4 (lower is better)
Translates to: QLLQDADRGVCGDVREEGRQSPF*NIGYLP
Trigger: CGGTAAATAACCAATATTGCAAAAAGGTGATTGGCG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGGCTTTCGGATTTCGTaGCGGAGCCGAGGACTTCGC +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATGFRIS*RSRGLR
Trigger: GCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGGCTTTCGGATTTCGTaGCGGAGCCGAGGACTTCGC +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSGFRIS*RSRGLR
Trigger: GCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTGATGCCATAATTGCATaGTTATCTACACCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TILLLGGQQLCGCPVSIADAIIA*LSTPVP
Trigger: AGGAACTGGTGTAGATAAGCATGCAATTATGGCATC...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGGCAGAGAGGTGTTaGTCAGCCTTCAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPRAERC*SAFSLT
Trigger: GGTCAGGCTGAAGGCTGAGCAACACCTCTCTGCCCT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTTTCCCCATTTCTGCTaGCTCTTTGTTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFFPHFC*LFVASG
Trigger: TCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAAA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTATCTTTCCCCATTTCTaGTGCCTCTTTGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAIFPHF*CLFVAS
Trigger: AGAGGCAACAAAGAGGCAGCAGAAATGGGGAAAGAT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTGGCCATCCTTGTCTTTaGATTCAACAGCGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFGHPCL*IQQRQS
Trigger: ACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCC...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGCCATCCTTGTCTTTaGATTCAACAGCGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLGHPCL*IQQRQS
Trigger: ACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCTCCAAGCTGAATTCTaGACTCATCTCTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSLQAEF*THLWAT
Trigger: GGTTGCCCAGAGATGAGTGCAGAATTCAGCTTGGAG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAAATGGGCAGGTACGCCATCTAAAAAGTaGATGCTGCAAATGACTTCT +
Preference number: 4 (lower is better)
Translates to: WRAGLAFFGQYPVGKWAGTPSKK*MLQMTS
Trigger: AGAAGTCATTTGCAGCATCCACTTTTTAGATGGCGT...ACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAATCAGTCACACCCAGGTaGTTGTGCACCATATCCAGA +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAESVTPR*LCTISR
Trigger: TCTGGATATGGTGCACAACCACCTGGGTGTGACTGA...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTCAGTCACACCCAGGTaGTTGTGCACCATATCCAGA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSSVTPR*LCTISR
Trigger: TCTGGATATGGTGCACAACCACCTGGGTGTGACTGA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCATCGGAAAGATAGCCTaGATGATGTATGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSIGKIA*MMYGRI
Trigger: AATTCTTCCATACATCATCCAGGCTATCTTTCCGAT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTTATCTGCAGAAGAGTaGCGTGGCTTTCGGATTTCG +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLILSAEE*RGFRIS
Trigger: CGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTATGGAGACACAGAACTaGATGACTTCTGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIMETQN*MTSGSG
Trigger: ACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCAT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGCCTTTGGTCACCCTGTaGAAGTCATCTAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLPLVTL*KSSKSC
Trigger: GCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGG...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTATGAACATCACCACTTaGTCATGCGTGTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAMNITT*SCVCSE
Trigger: CTCAGAACACACGCATGACCAAGTGGTGATGTTCAT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGCCAGCTCCCGTGAGTaGGACTCCCGGCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIASSRE*DSRLAL
Trigger: CAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCATCATCGGGCACACCGTaGTCAGGCCATGCGACGTAC +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSSSGTP*SGHATY
Trigger: GTACGTCGCATGGCCTGACCACGGTGTGCCCGATGA...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTATCCAGTGGGTAAATaGGCAGGTTCCTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAYPVGK*AGSSQL
Trigger: TAACTGAGAGGAACCTGCCCATTTACCCACTGGATA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACTAGGATCCAGCATTTaGACTAAACCTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGLGSSI*TKPSSY
Trigger: GTATGAAGAAGGTTTAGTCCAAATGCTGGATCCTAG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACTTTCCCACAGCTACTaGTTCCTCTTGCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAELSHSY*FLLLLP
Trigger: TGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCAACCCTCCAGAAGCTaGGTTTCCCATGGTTCAATT +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEQPSRS*VSHGSI
Trigger: AATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTGCTGGCCTGCCCAGTaGCAGAAGACTGCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPCWPAQ*QKTACN
Trigger: GTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTCTTCCCAGTATTTCCTaGATTTGTTCCTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASALPSIS*ICSWQP
Trigger: AGGTTGCCAGGAACAAATCCAGGAAATACTGGGAAG...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCCTCTTTGTTGCCTCTaGAGGATGAAGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEPLCCL*RMKRAF
Trigger: AAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGTCCGGGCTTTGTACATaGTACTACTTTGTAACTTTC +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLSGLCT*YYFVTF
Trigger: GAAAGTTACAAAGTAGTACCATGTACAAAGCCCGGA...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCCCATAGTCCAGTACTaGGACAGAACATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIPIVQY*DRTFFS
Trigger: GGAAAAGAATGTTCTGTCTCAGTACTGGACTATGGG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTACAAGAGGCATCTTTTaGTCCACTCCTCCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLTRGIF*STPPLR
Trigger: TCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGT...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGACAAGAGGCATCTTTTaGTCCACTCCTCCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEETRGIF*STPPLR
Trigger: TCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGT...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCTCTGGCCAGTACTGGTaGCATTTGGTCCGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATSGQYW*HLVRPR
Trigger: ACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGA...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGATGACAGTGGCCGCTaGTTCAGCACCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYDDSGR*FSTCPS
Trigger: GGAGGGGCAGGTGCTGAATCAGCGGCCACTGTCATC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGAAATACAGGCCTAAATaGTGCCATAATTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLKYRPK*CHNCML
Trigger: AAGCATGCAATTATGGCATCATTTAGGCCTGTATTT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAAATACAGGCCTAAATaGTGCCATAATTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHKYRPK*CHNCML
Trigger: AAGCATGCAATTATGGCATCATTTAGGCCTGTATTT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAAAATACAGGCCTAAATaGTGCCATAATTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEKYRPK*CHNCML
Trigger: AAGCATGCAATTATGGCATCATTTAGGCCTGTATTT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCATTGTGACTGGGGGTaGATGCACACATTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEHCDWG*MHTFVL
Trigger: AAGAACAAATGTGTGCATTCACCCCCAGTCACAATG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTCTGATCCTCTCCTTTaGAATGCAATGGAGACCATT +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTSDPLL*NAMETI
Trigger: AATGGTCTCCATTGCATTTCAAAGGAGAGGATCAGA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTAATTTGAGGCTGCAGTaGACAATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFNLRLQ*TMIMPL
Trigger: CAGTGGCATGATCATTGTTCACTGCAGCCTCAAATT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAGCTACAGGATTTACTTaGATTGTTTGCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LPERSVLLFQGGCPWERGATGFT*IVCSFR
Trigger: CCTAAAAGAGCAAACAATTCAAGTAAATCCTGTAGC...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGCAGGTTCTAGAGGGTaGCACCAGCAGGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATAGSRG*HQQGSL
Trigger: GAGAGATCCCTGCTGGTGTCACCCTCTAGAACCTGC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTAAGAAAACTCAGGGTTaGGGGCAACATATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFKKTQG*GQHILP
Trigger: AGGCAAGATATGTTGCCCTCAACCCTGAGTTTTCTT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACAAGTCTCAGAAATGTaGCATGTCTCTGTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEQVSEM*HVSVAA
Trigger: GGCTGCTACAGAGACATGTCACATTTCTGAGACTTG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTATTGTCTGGCCAAGATaGCAAAAGGGAAACCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIIVWPR*QKGNLL
Trigger: CAAGAGGTTTCCCTTTTGTCATCTTGGCCAGACAAT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTGCAGGGCCACTGTTCTaGACACTGTGCCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPAGPLF*TLCQDP
Trigger: TGGATCCTGGCACAGTGTTCAGAACAGTGGCCCTGC...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTCCACTGTGCTGCTCATaGAGAGATTCGACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFPLCCS*RDSTFV
Trigger: AACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGG...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTATTTGCAAGGTTATCTaGAGAAGAGTGGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFICKVI*RRVAWL
Trigger: AAGCCACGCCACTCTTCTGCAGATAACCTTGCAAAT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTATTTGCAAGGTTATCTaGAGAAGAGTGGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIICKVI*RRVAWL
Trigger: AAGCCACGCCACTCTTCTGCAGATAACCTTGCAAAT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGGTAGGTCATTTCATTTaGAAGGTTATCTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLVGHFI*KVICRR
Trigger: TCTTCTGCAGATAACCTTGCAAATGAAATGACCTAC...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCATCACCACTTGGTCATaGGTGTGTTCTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSITTWS*VCSEMS
Trigger: GGACATCTCAGAACACACGCATGACCAAGTGGTGAT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAACCTGCCAAAACTGTaGACAGGTATGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPNLPKL*TGMRQG
Trigger: CCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTACTGGCTTGATGTCTaGACCATCATGGCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPYWLDV*TIMARW
Trigger: CCAGCGCGCCATGATGGTGCAGACATCAAGCCAGTA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTGTGTCCGGTCTCAATTaGTCCAGGATGCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPVSGLN*SRMPTG
Trigger: CCCTGTCGGCATCCTGGAGCAATTGAGACCGGACAC...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTAGGGCAGAGAGGTGTTaGTCAGCCTTCAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPRAERC*SAFSLT
Trigger: GGTCAGGCTGAAGGCTGAGCAACACCTCTCTGCCCT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGGTCTTCATCCGTCTTaGTACCAGCAAACTATTCAA +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAGLHPS*YQQTIQ
Trigger: TTGAATAGTTTGCTGGTAGCAAGACGGATGAAGACC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAAATGGGCAGGTGTCCAGATTATTTTGTaGTCTTGTTCTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WRAGLAFFGQYPVGKWAGVQIIL*SCSLSS
Trigger: AGAAGAGAGAGAACAAGAGCACAAAATAATCTGGAC...ACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR GCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTTCTGAACTGCTGGCCTaGCCAGTGGCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPSELLA*PVAEDC
Trigger: GCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGA...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGTTTCCCCATTTCTGCTaGCTCTTTGTTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLFPHFC*LFVASG
Trigger: TCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAAA...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCACAAATCCTTTGGTTaGTCCAAACAGAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTHKSFG*SKQNES
Trigger: GCTCTCATTCTGTTTGGAGCAACCAAAGGATTTGTG...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCACCATGGCTCCTGTTaGAGTAAGATAAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLHHGSC*SKINLV
Trigger: CACCAGATTTATCTTACTGCAACAGGAGCCATGGTG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTTACAACCTCCTATTTaGACAGTTCCGGGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASALQPPI*TVPGFV
Trigger: TACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCACCCAAGCTCCATCTaGATGAAGTTGCTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLHPSSI*MKLLKG
Trigger: TCCTTTTAGCAACTTCATGCAGATGGAGCTTGGGTG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTATCGAGTTTTCTCTTTaGGTAACTCCGAGGTGCGTA +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFIEFSL*VTPRCV
Trigger: TACGCACCTCGGAGTTACCCAAAGAGAAAACTCGAT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTATCGAGTTTTCTCTTTaGGTAACTCCGAGGTGCGTA +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIIEFSL*VTPRCV
Trigger: TACGCACCTCGGAGTTACCCAAAGAGAAAACTCGAT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACGGTGGAGCCCCCTTTaGTCACCCTGTGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSRWSPL*SPCGSH
Trigger: ATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACACAGTAGTACTGGCTaGCGTCCTCGGTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIHSSTG*RPRWSP
Trigger: GGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGTATCCAGTGGGTAAATaGGCAGGTTCCTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEYPVGK*AGSSQL
Trigger: TAACTGAGAGGAACCTGCCCATTTACCCACTGGATA...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTGTCCCATCTCCCCTTaGGAAAATCATAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFCPISP*ENHKVS
Trigger: TGAAACCTTATGATTTTCCCAAGGGGAGATGGGACA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCAACCCTCCAGAAGCTaGGTTTCCCATGGTTCAATT +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSQPSRS*VSHGSI
Trigger: AATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTTCAATATGGGGTTATaGTACTGTGTGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFFNMGL*YCVTSP
Trigger: GGGAGATGTCACACAGTACCATAACCCCATATTGAA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCTTCCCAGTATTTCCTaGATTTGTTCCTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLLPSIS*ICSWQP
Trigger: AGGTTGCCAGGAACAAATCCAGGAAATACTGGGAAG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTATCAGCCTCCCAGAATaGCAAATCTTGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIISLPE*QILTSS
Trigger: AGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGAT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCTTTGCTCCTCTGCCTaGGGAGCGGGGAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYLCSSA*GAGKGG
Trigger: GCCTCCTTTCCCCGCTCCCCAGGCAGAGGAGCAAAG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp TCTGAACTGCTGGCCTGCCCAGTGGCAGAAGACTGCTaGCAACCTTTGGTAGGCTTTTTAGAAATTTATGTG +
Preference number: 4 (lower is better)
Translates to: SELLACPVAEDC*QPLVGFLEIYV
Trigger: CACATAAATTTCTAAAAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCACTGGGCAGGCCAGCAGTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CGAAGAATCGCTTCACACACAAACTTGTACTGGCTTGATGTCTGCACCATCATGGCTGCAAATGACTTCTaGTCGAGTTTTCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RRIASHTNLYWLDVCTIMAANDF*SSFLFG
Trigger: CCCAAAGAGAAAACTCGATCAGAAGTCATTTGCAGC...CATGATGGTGCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGCGATTCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGCTGCAAATGACTTCTaGTCGAGTTTTCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEAANDF*SSFLFG
Trigger: CCCAAAGAGAAAACTCGATCAGAAGTCATTTGCAGC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCTTTTAACTGCTTCCTaGTGGCTTTGCTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSLLTAS*WLCLLP
Trigger: TGGAAGCAAGCAAAGCCATCAGGAAGCAGTTAAAAG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGGTAATTCAGCATGTTaGAGGCCACAATATGTTCCC +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSGNSAC*RPQYVP
Trigger: GGGAACATATTGTGGCCTTCAACATGCTGAATTACC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCATCTTCCGTTTCCGTaGTGTAGGTCATTTCATTTG +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEHLPFP*CRSFHL
Trigger: CAAATGAAATGACCTACATCACGGAAACGGAAGATG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCGTTCATCTTCAGACTTaGAGTCAGCAAATGAGCGGA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSVHLQT*SQQMSG
Trigger: TCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAAC...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGGTTCATCTTCAGACTTaGAGTCAGCAAATGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLVHLQT*SQQMSG
Trigger: TCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAAC...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCGTGACCACCTGGGATaGCAGTGGCCGCTGATTCAG +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSRDHLG*QWPLIQ
Trigger: CTGAATCAGCGGCCACTGTCATCCCAGGTGGTCACG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGGACAGGCCCCAAACTaGGATCCTTTTTGTATCTTT +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEGQAPN*DPFCIF
Trigger: AAAGATACAAAAAGGATCTCAGTTTGGGGCCTGTCC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTACTCAACGGTAATTTaGATCGTTAGGAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTYSTVI*IVRNPE
Trigger: CTCAGGATTCCTAACGATTCAAATTACCGTTGAGTA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGGTGGGAAGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATGGKIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCTTCCCACC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCCGGTCTGGGTGTTTGTaGCCAGCATTTCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATRSGCL*PAFLGT
Trigger: TGTCCCGAGAAATGCTGGTCACAAACACCCAGACCG...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAATTGAGCAAAGTTTCTaGGTCAACCCCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEIEQSF*VNPMAS
Trigger: TGATGCCATGGGGTTGACTCAGAAACTTTGCTCAAT...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCTCCATTTTTACAGATaGCAAAATCGGAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFLHFYR*QNRSSD
Trigger: ATCTGAGCTCCGATTTTGTCATCTGTAAAAATGGAG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAGTACAAACCCCCAGGTaGGCATTCTGTGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQVQTPR*AFCVPG
Trigger: TCCTGGGACACAGAATGCTCACCTGGGGGTTTGTAC...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTGTCCTATGAAGAGCTaGGCAGGGATGAATGGGGTG +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPCPMKS*AGMNGV
Trigger: CACCCCATTCATCCCTGCTCAGCTCTTCATAGGACA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACCACTGTGCTGCTCATaGAGAGATTCGACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEPLCCS*RDSTFV
Trigger: AACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGCCACTGTGCTGCTCATaGAGAGATTCGACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLPLCCS*RDSTFV
Trigger: AACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGG...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGGCTTTCGGATTTCGTaGCGGAGCCGAGGACTTCGC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYGFRIS*RSRGLR
Trigger: GCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CGAAGAATCGCTTCACACACAAACTTGTACTGGCTTGATGTCTGCACCATCATGATTTTGAGGCAGCTTTaGAAACGTGATGGCCAAACC +
Preference number: 4 (lower is better)
Translates to: RRIASHTNLYWLDVCTIMILRQL*KRDGQT
Trigger: GGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAAT...CATGATGGTGCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGCGATTCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCATTTTGAGGCAGCTTTaGAAACGTGATGGCCAAACC +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSILRQL*KRDGQT
Trigger: GGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAAT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAATTTTGAGGCAGCTTTaGAAACGTGATGGCCAAACC +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEILRQL*KRDGQT
Trigger: GGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAAT...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTAACCTGCCAAAACTGTaGACAGGTATGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPNLPKL*TGMRQG
Trigger: CCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCAACCTGCCAAAACTGTaGACAGGTATGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATNLPKL*TGMRQG
Trigger: CCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCATACTGGCTTGATGTCTaGACCATCATGGCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSYWLDV*TIMARW
Trigger: CCAGCGCGCCATGATGGTGCAGACATCAAGCCAGTA...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCTACTGGCTTGATGTCTaGACCATCATGGCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATYWLDV*TIMARW
Trigger: CCAGCGCGCCATGATGGTGCAGACATCAAGCCAGTA...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTGATGCCATAATTGCATaGTTATCTACACCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTDAIIA*LSTPVP
Trigger: AGGAACTGGTGTAGATAAGCATGCAATTATGGCATC...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGATGCCATAATTGCATaGTTATCTACACCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFDAIIA*LSTPVP
Trigger: AGGAACTGGTGTAGATAAGCATGCAATTATGGCATC...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTCTCCCTCCCACCTCTaGCATTTAGCAGTAAAATAT +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLISPSHL*HLAVKY
Trigger: ATATTTTACTGCTAAATGGCAGAGGTGGGAGGGAGA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTCTTCTCCATTCATATaGAGCCAAATTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLSSPFI*SQISQA
Trigger: TGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTTACAACCTCCTATTTaGACAGTTCCGGGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFLQPPI*TVPGFV
Trigger: TACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGTGACTTTGCTCCTCTaGCTGGGGAGCGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSVTLLL*LGSGER
Trigger: CCTTTCCCCGCTCCCCAGGCAGAGGAGCAAAGTCAC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCATAAGGATCTCCGCATaGCTGGGTTCCACACCATCC +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPIRISA*LGSTPS
Trigger: GGATGGTGTGGAACCCAGCCATGCGGAGATCCTTAT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGATGAACATCACCACTTaGTCATGCGTGTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLMNITT*SCVCSE
Trigger: CTCAGAACACACGCATGACCAAGTGGTGATGTTCAT...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCGGCCATGCGACGTACTaGAGATGTGTCACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPGHATY*RCVTVC
Trigger: ACACACAGTGACACATCTCCAGTACGTCGCATGGCC...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTGTCCCATCTCCCCTTaGGAAAATCATAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLCPISP*ENHKVS
Trigger: TGAAACCTTATGATTTTCCCAAGGGGAGATGGGACA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGCTTCCCAGTATTTCCTaGATTTGTTCCTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLLPSIS*ICSWQP
Trigger: AGGTTGCCAGGAACAAATCCAGGAAATACTGGGAAG...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTCAGGAACTACAAAGCTaGGGTAAGATAACTATGTTC +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAQELQS*GKITMF
Trigger: GAACATAGTTATCTTACCCCAGCTTTGTAGTTCCTG...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTCTGAGTCAACCCCATaGCATCATACACAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLSESTP*HHTQRN
Trigger: GTTTCTTTGTGTATGATGCCATGGGGTTGACTCAGA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAAGACACCTTCTTGGCTaGGGTACAAACCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQRHLLG*GTNPQV
Trigger: CACCTGGGGGTTTGTACCCCAGCCAAGAAGGTGTCT...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACTGAGCAGGGATGAATaGGGTGGAAACAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSLSRDE*GGNSPP
Trigger: TGGTGGGCTGTTTCCACCCCATTCATCCCTGCTCAG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTGCCCTACGTCTTGACTaGTGGGGGCAATTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPALRLD*WGQFSA
Trigger: GGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGC...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp ATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTaGACCTCATCTAGTCCAGCCCAACCTTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ILWNISLPEWQI*TSSSPAQPSLF
Trigger: AAAAAGGGAAGGTTGGGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp TGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTaGGTGACAAGTCTCAGAAATGTGACATGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: CIQQRQSLRDKL*VTSLRNVTCLC
Trigger: ACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCAGAACATTCTTTTCCTaGGGTAGTAGCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSRTFFS*GSSFFA
Trigger: GGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACATCTTCCGTTTCCGTaGTGTAGGTCATTTCATTTG +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEHLPFP*CRSFHL
Trigger: CAAATGAAATGACCTACATCACGGAAACGGAAGATG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCTGCGGGCTTCGGTTCTaGGAAACTTCAGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATCGLRF*ETSESL
Trigger: CAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCA...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACTTGAAGTCAGCAAATaGGCGGACAGCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSLEVSK*ADSSPP
Trigger: AGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTTTTTGTCCAAATTTTaGGGCAGCTTTGCAAACGTG +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLFLSKF*GSFANV
Trigger: CACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAATCAGCCCTTACAGTCTaGCACACAGAAACAAACAAA +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAESALTV*HTETNK
Trigger: TTTGTTTGTTTCTGTGTGTCAGACTGTAAGGGCTGA...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTCTGATCCTCTCCTTTaGAATGCAATGGAGACCATT +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSSDPLL*NAMETI
Trigger: AATGGTCTCCATTGCATTTCAAAGGAGAGGATCAGA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTCTTTACTTCCTCTTCTaGGTACATAAAAACCGCTGT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFLYFLF*VHKNRC
Trigger: ACAGCGGTTTTTATGTACTCAGAAGAGGAAGTAAAG...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGTTTCTTGGAGCTTGCTaGATTTTTGTGAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEFLGAC*IFVSPD
Trigger: ATCTGGACTCACAAAAATTCAGCAAGCTCCAAGAAA...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTAGGGATCTCTCATCTTaGTTAAATTGGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIRDLSS*LNWHIN
Trigger: GTTGATGTGCCAATTTAATCAAGATGAGAGATCCCT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTAGGGATCTCTCATCTTaGTTAAATTGGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLRDLSS*LNWHIN
Trigger: GTTGATGTGCCAATTTAATCAAGATGAGAGATCCCT...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTGCCTTGTCATATATTaGGCAAAGTTTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASACLVIY*AKFLSQ
Trigger: TTGACTCAGAAACTTTGCTCAATATATGACAAGGCA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCACACCCAGGTGGTTGTaGACCATATCCAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPTPRWL*TISRRT
Trigger: GGTTCTTCTGGATATGGTGCACAACCACCTGGGTGT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCGCCAATCACCTTTTTaGAATATTGGTTATTTACCG +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFRQSPF*NIGYLP
Trigger: CGGTAAATAACCAATATTGCAAAAAGGTGATTGGCG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR GCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGCTCTTGGTTTCTAAGTaGTCCACTGATAAGGATCTC +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLLLVSK*STDKDL
Trigger: GAGATCCTTATCAGTGGAGCACTTAGAAACCAAGAG...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGACACGCTTGCCAGGTaGAAACAGAGTGCACACCTA +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATDTLAR*KQSAHL
Trigger: TAGGTGTGCACTCTGTTTGCACCTGGCAAGCGTGTC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAACTGGTTCCTCTTGCTaGTTCCAGAGAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSTGSSC*FQRGLS
Trigger: GGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGT...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGCTACTGGTTCCTCTTaGTGCTTCCAGAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSATGSS*CFQRGL
Trigger: CAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTAGGGCAGAGAGGTGTTaGTCAGCCTTCAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSRAERC*SAFSLT
Trigger: GGTCAGGCTGAAGGCTGAGCAACACCTCTCTGCCCT...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTCTCCCTCCCACCTCTaGCATTTAGCAGTAAAATAT +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSSPSHL*HLAVKY
Trigger: ATATTTTACTGCTAAATGGCAGAGGTGGGAGGGAGA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTACGCCATCTAAAAAGTaGATGCTGCAAATGACTTCT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFTPSKK*MLQMTS
Trigger: AGAAGTCATTTGCAGCATCCACTTTTTAGATGGCGT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTAGCCTGGATGATGTATaGAAGAATTATAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASASLDDV*KNYSLQ
Trigger: TTGGAGACTATAATTCTTCCATACATCATCCAGGCT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCATCGGAAAGATAGCCTaGATGATGTATGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: FPISAASLLPLEDEEGFFIGKIA*MMYGRI
Trigger: AATTCTTCCATACATCATCCAGGCTATCTTTCCGAT...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTATCGGAAAGATAGCCTaGATGATGTATGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAIGKIA*MMYGRI
Trigger: AATTCTTCCATACATCATCCAGGCTATCTTTCCGAT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAATAAGGATCTCCGCATaGCTGGGTTCCACACCATCC +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQIRISA*LGSTPS
Trigger: GGATGGTGTGGAACCCAGCCATGCGGAGATCCTTAT...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CCA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTTTTTCCATCTTCATCTaGTGTGATACGGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLFSIFI*CDTDQD
Trigger: GTCTTGATCCGTATCACACCAGATGAAGATGGAAAA...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTTTTCCATCTTCATCTaGTGTGATACGGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFFSIFI*CDTDQD
Trigger: GTCTTGATCCGTATCACACCAGATGAAGATGGAAAA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCACCCTCCGGACACATaGGGAAAATGGCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSHPPDT*GKWLRG
Trigger: TCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATGTCTGCACCATCATaGCGCGCTGGTCTCGCATTT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATMSAPS*RAGLAF
Trigger: AAATGCGAGACCAGCGCGCCATGATGGTGCAGACAT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCAGGACAACAGCTCTGTaGGTGTCCGGTCTCAATTGC +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATRTTAL*VSGLNC
Trigger: GCAATTGAGACCGGACACCCACAGAGCTGTTGTCCT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGATATATATATATATCTaGCAGTCCTGGTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLIYIYI*QSWWPT
Trigger: GGTGGGCCACCAGGACTGCCAGATATATATATATAT...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGTGAAGACACCTTCTTaGCTGGGGTACAAACCCCCA +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATVKTPS*LGYKPP
Trigger: TGGGGGTTTGTACCCCAGCCAAGAAGGTGTCTTCAC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTGCGGGCTTCGGTTCTaGGAAACTTCAGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLCGLRF*ETSESL
Trigger: CAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGGAGCCTGGAGCATTTaGAGATGGAGACACAGAACT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATGAWSI*RWRHRT
Trigger: AGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGATGTCCCGGCCATTaGTTAACACGATTTGATCCC +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPRCPGH*LTRFDP
Trigger: GGGATCAAATCGTGTTAATCAATGGCCGGGACATCT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGGTCATGCGTGTGTTCTaGGATGTCCCGGCCATTGAT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLVMRVF*DVPAID
Trigger: ATCAATGGCCGGGACATCTCAGAACACACGCATGAC...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTCACCTGGGTGTTTGTaGCCAGCATTTCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLSPGCL*PAFLGT
Trigger: TGTCCCGAGAAATGCTGGTCACAAACACCCAGGTGA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR TCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTATATTCAGATAGTCTaGTCCTCTCCTTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFYIQIV*SSPLKC
Trigger: GCATTTCAAAGGAGAGGATCAGACTATCTGAATATA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGGTGGGAAGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSGGKIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCTTCCCACC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGTTTCTTGGAGCTTGCTaGATTTTTGTGAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLFLGAC*IFVSPD
Trigger: ATCTGGACTCACAAAAATTCAGCAAGCTCCAAGAAA...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGGCTACAGGATTTACTTaGATTGTTTGCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEATGFT*IVCSFR
Trigger: CCTAAAAGAGCAAACAATTCAAGTAAATCCTGTAGC...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGATGCGGCATACATGTaGCACTTGGCCACTAGCTCC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYDAAYM*HLATSS
Trigger: GGAGCTAGTGGCCAAGTGTCACATGTATGCCGCATC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTGTTTTAGCCCACTGTaGTGCTCATGCAGAGATTCG +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPCFSPL*CSCRDS
Trigger: CGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAACCGTGGTCAGGCCATaGGACGTACTGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIITVVRP*DVLEMC
Trigger: ACACATCTCCAGTACGTCGCATGGCCTGACCACGGT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTACTGGCTTGATGTCTaGACCATCATGGCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYYWLDV*TIMARW
Trigger: CCAGCGCGCCATGATGGTGCAGACATCAAGCCAGTA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGACTGGTTCCTCTTGCTaGTTCCAGAGAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLTGSSC*FQRGLS
Trigger: GGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGT...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATCAATTGCTCCAGGATaGCGACAGGGGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIISIAPG*RQGCVW
Trigger: CCACACACACCCCTGTCGGCATCCTGGAGCAATTGA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTGTCCAGATTATTTTGTaGTCTTGTTCTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFVQIIL*SCSLSS
Trigger: AGAAGAGAGAGAACAAGAGCACAAAATAATCTGGAC...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTACATTTAGACTACTTTaGAAGCATTTTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFTFRLL*KHFAHR
Trigger: CCTGTGTGCAAAATGCTTGCAAAGTAGTCTAAATGT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTGTGACCGTAATGGCTaGATTTCTGCAACCATAATA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSCDRNG*ISATII
Trigger: TATTATGGTTGCAGAAATGCAGCCATTACGGTCACA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCACCTTTACCGAGACTaGTCTCAGCTGAGGACAACA +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPHLYRD*SQLRTT
Trigger: TGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTAGCCTGGATGATGTATaGAAGAATTATAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFSLDDV*KNYSLQ
Trigger: TTGGAGACTATAATTCTTCCATACATCATCCAGGCT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATGCAGAAGAGTGGCGTaGCTTTCGGATTTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIICRRVA*LSDFVP
Trigger: CGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCATGGAGACACAGAACTaGATGACTTCTGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPMETQN*MTSGSG
Trigger: ACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCAT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGCAGGGGCCCCTGAGTaGCGATGTACTTGTTCACAA +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYAGAPE*RCTCSQ
Trigger: TTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGGGACACATAGGCGATaGTGCAGTCCTCTGACTGAC +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSGTHRR*CSPLTD
Trigger: GTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGGGACACATAGGCGATaGTGCAGTCCTCTGACTGAC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIGTHRR*CSPLTD
Trigger: GTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGGGCCATGCGACGTACTaGAGATGTGTCACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLGHATY*RCVTVC
Trigger: ACACACAGTGACACATCTCCAGTACGTCGCATGGCC...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCTTTCCCACAGCTACTaGTTCCTCTTGCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPLSHSY*FLLLLP
Trigger: TGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGAGGACAACAGCTCTGTaGGTGTCCGGTCTCAATTGC +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLRTTAL*VSGLNC
Trigger: GCAATTGAGACCGGACACCCACAGAGCTGTTGTCCT...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCACACCATCTTGTTGCTaGGAGGACAACAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATTPSCC*EDNSSV
Trigger: CACAGAGCTGTTGTCCTCCCAGCAACAAGATGGTGT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTTCATCTAAGAGCTGCTaGTCAACGCCGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSSSKSC*STPSGE
Trigger: CTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGA...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCTTGAAGTCAGCAAATaGGCGGACAGCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSLEVSK*ADSSPP
Trigger: AGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGGCAGCTTTGCAAACGTaGTGGCCAAACCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLAALQT*WPNLAF
Trigger: AAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGC...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCAAATACAGGCCTAAATaGTGCCATAATTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSKYRPK*CHNCML
Trigger: AAGCATGCAATTATGGCATCATTTAGGCCTGTATTT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAATTTGAGGCTGCAGTaGACAATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPNLRLQ*TMIMPL
Trigger: CAGTGGCATGATCATTGTTCACTGCAGCCTCAAATT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAAGCTACAGGATTTACTTaGATTGTTTGCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEATGFT*IVCSFR
Trigger: CCTAAAAGAGCAAACAATTCAAGTAAATCCTGTAGC...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACAAGTCTCAGAAATGTaGCATGTCTCTGTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQQVSEM*HVSVAA
Trigger: GGCTGCTACAGAGACATGTCACATTTCTGAGACTTG...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATATTTGGTCCCCGGTCTaGGGTCACAGAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYIWSPV*GHRIFA
Trigger: GGCAAAGATTCTGTGACCTCAGACCGGGGACCAAAT...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAATTTGGTCCCCGGTCTaGGGTCACAGAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIIWSPV*GHRIFA
Trigger: GGCAAAGATTCTGTGACCTCAGACCGGGGACCAAAT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATTGAGTCCAGGAGTTTaGGGCCAGTCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIILSPGV*GQSGQH
Trigger: ATGTTGCCCAGACTGGCCTCAAACTCCTGGACTCAA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCCAGGACCTCCAAGCTaGATTCTGCACTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYPGPPS*ILHSSL
Trigger: CAGAGATGAGTGCAGAATTCAGCTTGGAGGTCCTGG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTGTCCTATGAAGAGCTaGGCAGGGATGAATGGGGTG +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYCPMKS*AGMNGV
Trigger: CACCCCATTCATCCCTGCTCAGCTCTTCATAGGACA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCATTTAGCCCACTGTGCTaGTCATGCAGAGATTCGACT +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSFSPLC*SCRDST
Trigger: AGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAA...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAATCACCACTTGGTCATaGGTGTGTTCTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSITTWS*VCSEMS
Trigger: GGACATCTCAGAACACACGCATGACCAAGTGGTGAT...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCACATTTAGACTACTTTaGAAGCATTTTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSTFRLL*KHFAHR
Trigger: CCTGTGTGCAAAATGCTTGCAAAGTAGTCTAAATGT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTCGCTTGCCCTCAAATaGTCATTTCTGAGGTACCCC +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLSLALK*SFLRYP
Trigger: GGGGTACCTCAGAAATGAGCATTTGAGGGCAAGCGA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGGCCATCCTTGTCTTTaGATTCAACAGCGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSGHPCL*IQQRQS
Trigger: ACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTGGCCATCCTTGTCTTTaGATTCAACAGCGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPGHPCL*IQQRQS
Trigger: ACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCC...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCACCTTTACCGAGACTaGTCTCAGCTGAGGACAACA +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLHLYRD*SQLRTT
Trigger: TGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCAGGTCACAGAATCTTTaGCACCTTTACCGAGACTGC +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATRSQNL*HLYRDC
Trigger: GCAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCAGCCTGGATGATGTATaGAAGAATTATAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSSLDDV*KNYSLQ
Trigger: TTGGAGACTATAATTCTTCCATACATCATCCAGGCT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATTATCTGCAGAAGAGTaGCGTGGCTTTCGGATTTCG +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQLSAEE*RGFRIS
Trigger: CGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGCTTCGGGGAAAAGCTaGTTCAGTTCATCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATASGKS*FSSSSD
Trigger: GTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGCAATAATACCCGGGTaGTGTCATAAGGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSAIIPG*CHKAAH
Trigger: ATGTGCTGCCTTATGACACCACCCGGGTATTATTGC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGCAATAATACCCGGGTaGTGTCATAAGGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATAIIPG*CHKAAH
Trigger: ATGTGCTGCCTTATGACACCACCCGGGTATTATTGC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCTCGGACAATATCCAGTaGGTAAATGGGCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATSDNIQ*VNGQVP
Trigger: AGGAACCTGCCCATTTACCCACTGGATATTGTCCGA...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTTCGGACAATATCCAGTaGGTAAATGGGCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPSDNIQ*VNGQVP
Trigger: AGGAACCTGCCCATTTACCCACTGGATATTGTCCGA...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATACCATCATGGCGCGCTaGTCTCGCATTTTTCGGACA +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYTIMAR*SRIFRT
Trigger: TGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGT...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCCTCTTTGTTGCCTCTaGAGGATGAAGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPPLCCL*RMKRAF
Trigger: AAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTATATCTGGCAGTCCTaGTGGCCCACCAGCTCTATA +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLYIWQS*WPTSSI
Trigger: TATAGAGCTGGTGGGCCACCAGGACTGCCAGATATA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCATAAAAATACGGTTTTaGTCCAAGGTATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSIKIRF*SKVSGA
Trigger: AGCACCTGATACCTTGGACCAAAACCGTATTTTTAT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp GGTCTTCATCCGTCTTGCTACCAGCAAACTATTCAATaGGCACCGAATTTGCTGAATATCAAAATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLHPSCYQQTIQ*APNLLNIKMAS
Trigger: TGAAGCCATTTTGATATTCAGCAAATTCGGTGCCAATTGAATAGTTTGCTGGTAGCAAGACGGATGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGGGTCCGCGCTATGTTaGTATAGCAGGATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYGSALC*YSRILL
Trigger: AAGCAGAATCCTGCTATATCAACATAGCGCGGACCC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGGGTCCGCGCTATGTTaGTATAGCAGGATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIGSALC*YSRILL
Trigger: AAGCAGAATCCTGCTATATCAACATAGCGCGGACCC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGGGTCCGCGCTATGTTaGTATAGCAGGATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSGSALC*YSRILL
Trigger: AAGCAGAATCCTGCTATATCAACATAGCGCGGACCC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCAGTAGCTTCTTTGCCTaGAAGAACGTATGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATSSFFA*KNVWCS
Trigger: TGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTACAAGAGGCATCTTTTaGTCCACTCCTCCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPTRGIF*STPPLR
Trigger: TCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGAGATGTCCCGGCCATTaGTTAACACGATTTGATCCC +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLRCPGH*LTRFDP
Trigger: GGGATCAAATCGTGTTAATCAATGGCCGGGACATCT...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTGTTCATCTTCAGACTTaGAGTCAGCAAATGAGCGGA +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPVHLQT*SQQMSG
Trigger: TCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAAC...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGCAGCTTTGCAAACGTaGTGGCCAAACCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYAALQT*WPNLAF
Trigger: AAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGCAGCTTTGCAAACGTaGTGGCCAAACCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSAALQT*WPNLAF
Trigger: AAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGATGGTGCAGTCCTCTaGCTGACACTGGATGTGAAA +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSDGAVL*LTLDVK
Trigger: TTTCACATCCAGTGTCAGTCAGAGGACTGCACCATC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACATTGTGACTGGGGGTaGATGCACACATTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSHCDWG*MHTFVL
Trigger: AAGAACAAATGTGTGCATTCACCCCCAGTCACAATG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCATTGTGACTGGGGGTaGATGCACACATTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPHCDWG*MHTFVL
Trigger: AAGAACAAATGTGTGCATTCACCCCCAGTCACAATG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCGTGAAACAGGAATCTTaGGCTACGGATTTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPVKQES*ATDFKW
Trigger: CCACTTAAAATCCGTAGCTCAAGATTCCTGTTTCAC...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAAGGAACTGGCTTTTTaGGATGGGAATGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPKELAF*DGNASN
Trigger: GTTTGAAGCATTCCCATCTCAAAAAGCCAGTTCCTT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAATTTGCAAGGTTATCTaGAGAAGAGTGGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQICKVI*RRVAWL
Trigger: AAGCCACGCCACTCTTCTGCAGATAACCTTGCAAAT...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAATTTTGAGGCAGCTTTaGAAACGTGATGGCCAAACC +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQILRQL*KRDGQT
Trigger: GGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAAT...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGTGACTGGGGGTGAATaGACACATTTGTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATVTGGE*THLFFH
Trigger: ATGGAAGAACAAATGTGTGCATTCACCCCCAGTCAC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCACTTTGCAAGCATTTTaGACACAGGGTGATGATGCA +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPTLQAF*TQGDDA
Trigger: TGCATCATCACCCTGTGTGCAAAATGCTTGCAAAGT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATCGCTTGCCCTCAAATaGTCATTTCTGAGGTACCCC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIISLALK*SFLRYP
Trigger: GGGGTACCTCAGAAATGAGCATTTGAGGGCAAGCGA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCACCTTTACCGAGACTaGTCTCAGCTGAGGACAACA +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYHLYRD*SQLRTT
Trigger: TGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCCACCATGGCTCCTGTTaGAGTAAGATAAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATHHGSC*SKINLV
Trigger: CACCAGATTTATCTTACTGCAACAGGAGCCATGGTG...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGGTCCAAGGTATCAGGTaGTACCTTACGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLVQGIR*YLTLCK
Trigger: TTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGAC...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGGAGAAGGCAGACTCTTaGTTTCTAAGTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLEKADS*FLSAPL
Trigger: CAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTC...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTCTTTAGCTGTGCCATaGATCCCTCCAAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYSLAVP*IPPKCP
Trigger: GGGACACTTTGGAGGGATCCATGGCACAGCTAAAGA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTCGGACAATATCCAGTaGGTAAATGGGCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLSDNIQ*VNGQVP
Trigger: AGGAACCTGCCCATTTACCCACTGGATATTGTCCGA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCTTCCCAGTATTTCCTaGATTTGTTCCTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPLPSIS*ICSWQP
Trigger: AGGTTGCCAGGAACAAATCCAGGAAATACTGGGAAG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCCTCTTTGTTGCCTCTaGAGGATGAAGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLPLCCL*RMKRAF
Trigger: AAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATCAGCCTCCCAGAATaGCAAATCTTGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATISLPE*QILTSS
Trigger: AGATGAGGTCAAGATTTGCCATTCTGGGAGGCTGAT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTCAAGTGGAGGAGCTTaGAGTAGCAGCAATACATGT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLSSGGA*SSSNTC
Trigger: ACATGTATTGCTGCTACTTCAAGCTCCTCCACTTGA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGAATTTGAGGCTGCAGTaGACAATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLNLRLQ*TMIMPL
Trigger: CAGTGGCATGATCATTGTTCACTGCAGCCTCAAATT...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAGTGAAACAGGAATCTTaGGCTACGGATTTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSVKQES*ATDFKW
Trigger: CCACTTAAAATCCGTAGCTCAAGATTCCTGTTTCAC...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCTACCCACAATGTATTaGACACCTGGCCTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYLPTMY*TPGLER
Trigger: TCTCTCAAGGCCAGGTGTTCAATACATTGTGGGTAG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCACGGAGTCGTCATCATaGTGTAAACCAAAATATTCC +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPTESSS*CKPKYS
Trigger: GGAATATTTTGGTTTACAGCATGATGACGACTCCGT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAAATCTTACTCGAAAATaGAGGGTACAGGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQNLTRK*RVQGKP
Trigger: AGGTTTCCCCTGTACCCTGCATTTTCGAGTAAGATT...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATGCCTGGTTTGTTCTTaGTGCAGTGTGTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIICLVCS*CSVLGS
Trigger: TGATCCCAACACACTGCAGCAAGAACAAACCAGGCA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR GCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTATTAGGTCTAAATTGTaGAGATCCCTACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPIRSKL*RSLPLC
Trigger: GCACAGTGGTAGGGATCTGCACAATTTAGACCTAAT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATATCACCACTTGGTCATaGGTGTGTTCTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYITTWS*VCSEMS
Trigger: GGACATCTCAGAACACACGCATGACCAAGTGGTGAT...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTGTGACCGTAATGGCTaGATTTCTGCAACCATAATA +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPCDRNG*ISATII
Trigger: TATTATGGTTGCAGAAATGCAGCCATTACGGTCACA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATCTTCTCCATTCATATaGAGCCAAATTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQSSPFI*SQISQA
Trigger: TGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCTCTTCTCCATTCATATaGAGCCAAATTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATSSPFI*SQISQA
Trigger: TGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGA...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGAGAAGGCAGACTCTTaGTTTCTAAGTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSEKADS*FLSAPL
Trigger: CAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATTATCTGCAGAAGAGTaGCGTGGCTTTCGGATTTCG +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIILSAEE*RGFRIS
Trigger: CGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGATGAACATCACCACTTaGTCATGCGTGTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLMNITT*SCVCSE
Trigger: CTCAGAACACACGCATGACCAAGTGGTGATGTTCAT...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGCTTCGGGGAAAAGCTaGTTCAGTTCATCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYASGKS*FSSSSD
Trigger: GTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAAATATTGGAAGTCGCTaGGAGATGGGACAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIINIGSR*EMGQRE
Trigger: CTCCCTTTGTCCCATCTCCCAGCGACTTCCAATATT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCAGAAACATGAATATTaGAAGTCGCTGGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLQKHEY*KSLGDG
Trigger: CCCATCTCCCAGCGACTTCCAATATTCATGTTTCTG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCATCCATCCCCCTTTCTTaGAGCTTGCTGAATTTTTGT +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSSIPLS*SLLNFC
Trigger: ACAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGA...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAATATATATATATATCTaGCAGTCCTGGTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSIYIYI*QSWWPT
Trigger: GGTGGGCCACCAGGACTGCCAGATATATATATATAT...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCATCTGAGTCAACCCCATaGCATCATACACAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSSESTP*HHTQRN
Trigger: GTTTCTTTGTGTATGATGCCATGGGGTTGACTCAGA...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
3UTR CAA 72 bp AATAACTTGCTAAATATCCTAATGGCATTTAAATTTTaGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: NNLLNILMAFKF*PAFPPSPFLGA
Trigger: AGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATGCCATTAGGATATTTAGCAAGTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCTTTTAACTGCTTCCTaGTGGCTTTGCTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSLLTAS*WLCLLP
Trigger: TGGAAGCAAGCAAAGCCATCAGGAAGCAGTTAAAAG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGGTAATTCAGCATGTTaGAGGCCACAATATGTTCCC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIGNSAC*RPQYVP
Trigger: GGGAACATATTGTGGCCTTCAACATGCTGAATTACC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCATTGATTAACACGATTTaGTCCCCTTCGTTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSLINTI*SPSFSL
Trigger: TAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAA...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATTGATTAACACGATTTaGTCCCCTTCGTTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQLINTI*SPSFSL
Trigger: TAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGGACAGGCCCCAAACTaGGATCCTTTTTGTATCTTT +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYGQAPN*DPFCIF
Trigger: AAAGATACAAAAAGGATCTCAGTTTGGGGCCTGTCC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTAACAAAACATCCAAATaGCCCAAGATAACCACACCA +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPNKTSK*PKITTP
Trigger: TGGTGTGGTTATCTTGGGTCATTTGGATGTTTTGTT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATATCAAGTGGAGGAGCTTaGAGTAGCAGCAATACATGT +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIISSGGA*SSSNTC
Trigger: ACATGTATTGCTGCTACTTCAAGCTCCTCCACTTGA...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCTACTCAACGGTAATTTaGATCGTTAGGAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATYSTVI*IVRNPE
Trigger: CTCAGGATTCCTAACGATTCAAATTACCGTTGAGTA...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGTGGATTCTATTTTTaGCTGATGTGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPSGFYF*LMCFWA
Trigger: AGCCCAAAAACACATCAGTCAAAAATAGAATCCACT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCTTTCTTGGAGCTTGCTaGATTTTTGTGAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATFLGAC*IFVSPD
Trigger: ATCTGGACTCACAAAAATTCAGCAAGCTCCAAGAAA...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTTTTCTTGGAGCTTGCTaGATTTTTGTGAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPFLGAC*IFVSPD
Trigger: ATCTGGACTCACAAAAATTCAGCAAGCTCCAAGAAA...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTATTGAGCAAAGTTTCTaGGTCAACCCCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSIEQSF*VNPMAS
Trigger: TGATGCCATGGGGTTGACTCAGAAACTTTGCTCAAT...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCCACTGTGCTGCTCATaGAGAGATTCGACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYPLCCS*RDSTFV
Trigger: AACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAATTTGCAAGGTTATCTaGAGAAGAGTGGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIICKVI*RRVAWL
Trigger: AAGCCACGCCACTCTTCTGCAGATAACCTTGCAAAT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCGTAGGTCATTTCATTTaGAAGGTTATCTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPVGHFI*KVICRR
Trigger: TCTTCTGCAGATAACCTTGCAAATGAAATGACCTAC...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGTGACTGGGGGTGAATaGACACATTTGTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYVTGGE*THLFFH
Trigger: ATGGAAGAACAAATGTGTGCATTCACCCCCAGTCAC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATGTGACCGTAATGGCTaGATTTCTGCAACCATAATA +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQCDRNG*ISATII
Trigger: TATTATGGTTGCAGAAATGCAGCCATTACGGTCACA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTATCTTTCCCCATTTCTaGTGCCTCTTTGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSIFPHF*CLFVAS
Trigger: AGAGGCAACAAAGAGGCAGCAGAAATGGGGAAAGAT...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCATCGGAAAGATAGCCTaGATGATGTATGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPIGKIA*MMYGRI
Trigger: AATTCTTCCATACATCATCCAGGCTATCTTTCCGAT...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTTATCCAGTGGGTAAATaGGCAGGTTCCTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSYPVGK*AGSSQL
Trigger: TAACTGAGAGGAACCTGCCCATTTACCCACTGGATA...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCAGAAACATGAATATTaGAAGTCGCTGGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYQKHEY*KSLGDG
Trigger: CCCATCTCCCAGCGACTTCCAATATTCATGTTTCTG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCAGAAACATGAATATTaGAAGTCGCTGGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSQKHEY*KSLGDG
Trigger: CCCATCTCCCAGCGACTTCCAATATTCATGTTTCTG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTGTCCCATCTCCCCTTaGGAAAATCATAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLCPISP*ENHKVS
Trigger: TGAAACCTTATGATTTTCCCAAGGGGAGATGGGACA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTTCAATATGGGGTTATaGTACTGTGTGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLFNMGL*YCVTSP
Trigger: GGGAGATGTCACACAGTACCATAACCCCATATTGAA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGTCCATCCCCCTTTCTTaGAGCTTGCTGAATTTTTGT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLSIPLS*SLLNFC
Trigger: ACAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGA...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAAGTGGATGCTGCAAATaGCTTCTGATCGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIISGCCK*LLIEFS
Trigger: AGAAAACTCGATCAGAAGTCATTTGCAGCATCCACT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR TCA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCATATATTCAGATAGTCTaGTCCTCTCCTTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: LILILWNISLPEWQILTSYIQIV*SSPLKC
Trigger: GCATTTCAAAGGAGAGGATCAGACTATCTGAATATA...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATATATTCAGATAGTCTaGTCCTCTCCTTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQYIQIV*SSPLKC
Trigger: GCATTTCAAAGGAGAGGATCAGACTATCTGAATATA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCTTTACTTCCTCTTCTaGGTACATAAAAACCGCTGT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLLYFLF*VHKNRC
Trigger: ACAGCGGTTTTTATGTACTCAGAAGAGGAAGTAAAG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATGCCTTGTCATATATTaGGCAAAGTTTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQCLVIY*AKFLSQ
Trigger: TTGACTCAGAAACTTTGCTCAATATATGACAAGGCA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAAAGGAACTGGCTTTTTaGGATGGGAATGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIKELAF*DGNASN
Trigger: GTTTGAAGCATTCCCATCTCAAAAAGCCAGTTCCTT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCGCCAATCACCTTTTTaGAATATTGGTTATTTACCG +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPRQSPF*NIGYLP
Trigger: CGGTAAATAACCAATATTGCAAAAAGGTGATTGGCG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACTCTTGGTTTCTAAGTaGTCCACTGATAAGGATCTC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIILLVSK*STDKDL
Trigger: GAGATCCTTATCAGTGGAGCACTTAGAAACCAAGAG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR GCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAGTAGGTCATTTCATTTaGAAGGTTATCTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQVGHFI*KVICRR
Trigger: TCTTCTGCAGATAACCTTGCAAATGAAATGACCTAC...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGGATGCCATAATTGCATaGTTATCTACACCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: NRNLELRILSGNSYRIYLDAIIA*LSTPVP
Trigger: AGGAACTGGTGTAGATAAGCATGCAATTATGGCATC...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCGAAAATTCACCTGAATaGACATTACTAATCCAGGTT +
Preference number: 4 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPENSPE*TLLIQV
Trigger: AACCTGGATTAGTAATGTGCATTCAGGTGAATTTTC...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGTCCAGATTATTTTGTaGTCTTGTTCTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FGRLFRNLCDRNGCISATVQIIL*SCSLSS
Trigger: AGAAGAGAGAGAACAAGAGCACAAAATAATCTGGAC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAGTCCAGATTATTTTGTaGTCTTGTTCTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQVQIIL*SCSLSS
Trigger: AGAAGAGAGAGAACAAGAGCACAAAATAATCTGGAC...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAACTTTGCAAGCATTTTaGACACAGGGTGATGATGCA +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIITLQAF*TQGDDA
Trigger: TGCATCATCACCCTGTGTGCAAAATGCTTGCAAAGT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCACAAATCCTTTGGTTaGTCCAAACAGAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSHKSFG*SKQNES
Trigger: GCTCTCATTCTGTTTGGAGCAACCAAAGGATTTGTG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACACAAATCCTTTGGTTaGTCCAAACAGAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIHKSFG*SKQNES
Trigger: GCTCTCATTCTGTTTGGAGCAACCAAAGGATTTGTG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCACAAATCCTTTGGTTaGTCCAAACAGAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYHKSFG*SKQNES
Trigger: GCTCTCATTCTGTTTGGAGCAACCAAAGGATTTGTG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTTTCAATATGGGGTTATaGTACTGTGTGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSFNMGL*YCVTSP
Trigger: GGGAGATGTCACACAGTACCATAACCCCATATTGAA...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTCCATCCCCCTTTCTTaGAGCTTGCTGAATTTTTGT +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYSIPLS*SLLNFC
Trigger: ACAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CCA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTATAAAAATACGGTTTTaGTCCAAGGTATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPIKIRF*SKVSGA
Trigger: AGCACCTGATACCTTGGACCAAAACCGTATTTTTAT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR TCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAAGGGATCTCTCATCTTaGTTAAATTGGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIRDLSS*LNWHIN
Trigger: GTTGATGTGCCAATTTAATCAAGATGAGAGATCCCT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTTGTAAGAAATACAAGTaGCTGGTTTGTTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSCKKYK*LVCSCC
Trigger: GCAGCAAGAACAAACCAGGCACTTGTATTTCTTACA...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACTAGGATCCAGCATTTaGACTAAACCTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIILGSSI*TKPSSY
Trigger: GTATGAAGAAGGTTTAGTCCAAATGCTGGATCCTAG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGTAGGTCATTTCATTTaGAAGGTTATCTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSVGHFI*KVICRR
Trigger: TCTTCTGCAGATAACCTTGCAAATGAAATGACCTAC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTACATTTAGACTACTTTaGAAGCATTTTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSTFRLL*KHFAHR
Trigger: CCTGTGTGCAAAATGCTTGCAAAGTAGTCTAAATGT...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGAAAATTCACCTGAATaGACATTACTAATCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RLFRNLCDRNGCISATIIENSPE*TLLIQV
Trigger: AACCTGGATTAGTAATGTGCATTCAGGTGAATTTTC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGAAAATTCACCTGAATaGACATTACTAATCCAGGTT +
Preference number: 4 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYENSPE*TLLIQV
Trigger: AACCTGGATTAGTAATGTGCATTCAGGTGAATTTTC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR GCA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGAAAATTCACCTGAATaGACATTACTAATCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSENSPE*TLLIQV
Trigger: AACCTGGATTAGTAATGTGCATTCAGGTGAATTTTC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 90 bp AACCTGCAGCATCCGGGGGCGCGGAGCGCCCAGGTAGGTCGCGCGTaGGGGCGGCGCGGAAGCTCGCTCGCGGCGCGACCTGGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: NLQHPGARSAQVGRA*GRRGSSLAARPGRR
Trigger: ACGGCGGCCAGGTCGCGCCGCGAGCGAGCTTCCGCGCCGCCCGCACGCGCGACCTACCTGGGCGCTCCGCGCCCCCGGATGCTGCAGGTT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS TCA 90 bp GCCCCTCCACCGTGCCCCTCAGGCTGCGGCTCACCTGGGTGTTTGTaGCCAGCATTTCTCGGGACACATAGGCGATGGTGCAGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: APPPCPSGCGSPGCL*PAFLGTHRRWCSPL
Trigger: CAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACCCAGGTGAGCCGCAGCCTGAGGGGCACGGTGGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS CCA 90 bp AGGACCAGAACCCACAGGGGCTCTGCACAAGCGGCGCCCACACACTaGCAGGGCCACTGTTCTGAACACTGTGCCAGGATCCATCCACCC +
Preference number: 5 (lower is better)
Translates to: RTRTHRGSAQAAPTH*QGHCSEHCARIHPP
Trigger: GGGTGGATGGATCCTGGCACAGTGTTCAGAACAGTGGCCCTGCCAGTGTGTGGGCGCCGCTTGTGCAGAGCCCCTGTGGGTTCTGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp AACAGCCCACCAAAGATGGGCTGGTACTATGGGTTCCGCTGTCAGTaGGCGCCCCTGCCCTTGAGGACCAGAACCCACAGGGGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: NSPPKMGWYYGFRCQ*APLPLRTRTHRGSA
Trigger: TGCAGAGCCCCTGTGGGTTCTGGTCCTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp GAGCGGACAGCTCTCCTCCTGATCACCAGGGCCAGCTCCCGTGAGTaGGACTCCCGGCTGGCTTTGATGAACATCACCACTTGGTCATGC +
Preference number: 5 (lower is better)
Translates to: ERTALLLITRASSRE*DSRLALMNITTWSC
Trigger: GCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCAGGCCTTCGGCAGCATaGCGCAGGTCAGGAAGCGCC +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVRPSAA*RRSGSA
Trigger: GGCGCTTCCTGACCTGCGCAATGCTGCCGAAGGCCT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp TCGGAGGAGTCATCGGGCACACCGTGGTCAGGCCATGCGACGTACTaGAGATGTGTCACTGTGTGTTCTTCCCCGGTTGACACGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SEESSGTPWSGHATY*RCVTVCSSPVDTLA
Trigger: GGCAAGCGTGTCAACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS TCA 90 bp GTTGACACGCTTGCCAGGTGCAAACAGAGTGCACACCTAGAAGCGTaGCCACCTGGGATGACAGTGGCCGCTGATTCAGCACCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: VDTLARCKQSAHLEA*PPGMTVAADSAPAP
Trigger: AGGGGCAGGTGCTGAATCAGCGGCCACTGTCATCCCAGGTGGTCACGCTTCTAGGTGTGCACTCTGTTTGCACCTGGCAAGCGTGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS CCA 90 bp GGATCAGCACCGTCCCGCTTTCGAGGCCCTTCTTTAGCTGTGCCATaGATCCCTCCAAAGTGTCCCCACCCTCCGGACACATGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: GSAPSRFRGPSLAVP*IPPKCPHPPDTWGK
Trigger: TTTTCCCCATGTGTCCGGAGGGTGGGGACACTTTGGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAGCGGGACGGTGCTGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp TCGGAGGAGTCATCGGGCACACCGTGGTCAGGCCATGCGACGTACTaGAGATGTGTCACTGTGTGTTCTTCCCCGGTCTGGGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: SEESSGTPWSGHATY*RCVTVCSSPVWVFV
Trigger: CACAAACACCCAGACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTCGGTGGAGCCCCCTTaGGTCACCCTGTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVSVEPP*VTLWKS
Trigger: TGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 90 bp TTCCAGAAAGTCGGAGGAGTCATCGGGCACACCGTGGTCAGGCCATaGGACGTACTGGAGATGTGTCACTGTGTGTTCTTCCCCGGTCTG +
Preference number: 5 (lower is better)
Translates to: FQKVGGVIGHTVVRP*DVLEMCHCVFFPGL
Trigger: CAGACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTCGGTGGAGCCCCCTTaGGTCACCCTGTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSVEPP*VTLWKS
Trigger: TGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp TGTGACCAGCATTTCTCGGGACACATAGGCGATGGTGCAGTCCTCTaGCTGACACTGGATGTGAAAGCCGCCGTGGTTCATGACGTCGGG +
Preference number: 5 (lower is better)
Translates to: CDQHFSGHIGDGAVL*LTLDVKAAVVHDVG
Trigger: CCCGACGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp TCTTGTCACAGTAGTACTGGCTGGCGTCCTCGGTGGAGCCCCCTTTaGTCACCCTGTGGAAGTCATCTAAGAGCTGCTGATCAACGCCGT +
Preference number: 5 (lower is better)
Translates to: SCHSSTGWRPRWSPL*SPCGSHLRAADQRR
Trigger: ACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCCGAGGACTTCGCCAGTaGGGAGTAATGGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCRGLRQ*GVMGGE
Trigger: TTCCCCTCCCATTACTCCCAACTGGCGAAGTCCTCG...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCTGGGTCAGGTAGCTTaGTGCCGGATTGTTCTCGGA +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVLGQVA*CRIVLG
Trigger: TCCGAGAACAATCCGGCACAAAGCTACCTGACCCAG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGTCGGTGGAGCCCCCTTaGGTCACCCTGTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLSVEPP*VTLWKS
Trigger: TGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGA...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAATCGGTGGAGCCCCCTTaGGTCACCCTGTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SPTANPPEAGFPMVQLLESVEPP*VTLWKS
Trigger: TGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGA...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACCCCGGTTGACACGCTaGCCAGGTGCAAACAGAGTG +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGPRLTR*PGANRV
Trigger: CACTCTGTTTGCACCTGGCAAGCGTGTCAACCGGGG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS TCA 90 bp GTGGAGCCCCCTTTGGTCACCCTGTGGAAGTCATCTAAGAGCTGCTaGTCAACGCCGTCAGGTGAGCAGGAGCCTGGAGCATTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: VEPPLVTLWKSSKSC*STPSGEQEPGAFED
Trigger: ATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCGACTCCCGGCTGGCTTaGATGAACATCACCACTTGG +
Preference number: 5 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSDSRLA*MNITTW
Trigger: CCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTC...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTACAGACTCCCAAGCATTaGGTCCCCGGTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVQTPKH*VPGLRS
Trigger: TGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTG...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CAA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACAGACTCCCAAGCATTaGGTCCCCGGTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEQTPKH*VPGLRS
Trigger: TGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCCTCAGCCTGTGACTTaGCTCCTCTGCCTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTPQPVT*LLCLGS
Trigger: GCTCCCCAGGCAGAGGAGCAAAGTCACAGGCTGAGG...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp TCCCGTGAGTGGGACTCCCGGCTGGCTTTGATGAACATCACCACTTaGTCATGCGTGTGTTCTGAGATGTCCCGGCCATTGATTAACACG +
Preference number: 5 (lower is better)
Translates to: SREWDSRLALMNITT*SCVCSEMSRPLINT
Trigger: CGTGTTAATCAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp TTCTGCCAGCACAGGCTGTCCTATGAAGAGCTGAGCAGGGATGAATaGGGTGGAAACAGCCCACCAAAGATGGGCTGGTACTATGGGTTC +
Preference number: 5 (lower is better)
Translates to: FCQHRLSYEELSRDE*GGNSPPKMGWYYGF
Trigger: GAACCCATAGTACCAGCCCATCTTTGGTGGGCTGTTTCCACCCCATTCATCCCTGCTCAGCTCTTCATAGGACAGCCTGTGCTGGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCGAGAAGGCAGACTCTaGGTTTCTAAGTGCTCCACT +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVREGRL*VSKCST
Trigger: AGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTTTCAGAATCGCTGTCTaGAGGGGCCAGAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAFRIAV*RGQRAL
Trigger: AAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAA...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGCTGGGTCAGGTAGCTTaGTGCCGGATTGTTCTCGGA +
Preference number: 5 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLLGQVA*CRIVLG
Trigger: TCCGAGAACAATCCGGCACAAAGCTACCTGACCCAG...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCAGGAGCCTGGAGCATTaGAAGATGGAGACACAGAAC +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVRSLEH*KMETQN
Trigger: GTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCT...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCAGTATTTCCTGGATTaGTTCCTGGCAACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVQYFLD*FLATSL
Trigger: CAGCGAGGTTGCCAGGAACAAATCCAGGAAATACTG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCTCTGCTGCCTCTTTGTaGCCTCTGGAGGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSAASL*PLEDEE
Trigger: CTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGA...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAACTCCAGACCTGTTTaGTGGGCAAGTCGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHNSRPV*WASRGR
Trigger: CCTGCCACGACTTGCCCACAAAACAGGTCTGGAGTT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS GCA 90 bp GGAGTAATGGGAGGGGAACGAGAAGGCAGACTCTTGGTTTCTAAGTaGTCCACTGATAAGGATCTCCGCATGGCTGGGTTCCACACCATC +
Preference number: 5 (lower is better)
Translates to: GVMGGEREGRLLVSK*STDKDLRMAGFHTI
Trigger: GATGGTGTGGAACCCAGCCATGCGGAGATCCTTATCAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCGTTCCCCTCCCATTACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS CCA 90 bp CAGGTGAGCAGGAGCCTGGAGCATTTGAAGATGGAGACACAGAACTaGATGACTTCTGGGTCAGGTAGCTTTGTGCCGGATTGTTCTCGG +
Preference number: 5 (lower is better)
Translates to: QVSRSLEHLKMETQN*MTSGSGSFVPDCSR
Trigger: CCGAGAACAATCCGGCACAAAGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp CACCATTATCATTCTTGTCACAGTAGTACTGGCTGGCGTCCTCGGTaGAGCCCCCTTTGGTCACCCTGTGGAAGTCATCTAAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: HHYHSCHSSTGWRPR*SPLWSPCGSHLRAA
Trigger: AGCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATGATAATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp GCCCTGTCATTACTGATGGCTCATGTTGATGCCCTACGTCTTGACTaGTGGGGGCAATTTTCTGCCAGCACAGGCTGTCCTATGAAGAGC +
Preference number: 5 (lower is better)
Translates to: ALSLLMAHVDALRLD*WGQFSASTGCPMKS
Trigger: GCTCTTCATAGGACAGCCTGTGCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAACATGAGCCATCAGTAATGACAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCGATCGAGTTTTCTCTTaGGGTAACTCCGAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: QLLQDADRGVCGDVREEGDRVFS*GNSEVR
Trigger: ACGCACCTCGGAGTTACCCAAAGAGAAAACTCGATC...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCGAGGACTTCGCCAGTaGGGAGTAATGGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFRGLRQ*GVMGGE
Trigger: TTCCCCTCCCATTACTCCCAACTGGCGAAGTCCTCG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCTCAAGGAGGATGCCCTaGGGAAAGAGGAATGAACTT +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVSRRMP*GKRNEL
Trigger: AAGTTCATTCCTCTTTCCCAAGGGCATCCTCCTTGA...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGGGTGTCCGGTCTCAATaGCTCCAGGATGCCGACAGG +
Preference number: 5 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEGVRSQ*LQDADR
Trigger: CCTGTCGGCATCCTGGAGCAATTGAGACCGGACACC...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGGTGTCCGGTCTCAATaGCTCCAGGATGCCGACAGG +
Preference number: 5 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLGVRSQ*LQDADR
Trigger: CCTGTCGGCATCCTGGAGCAATTGAGACCGGACACC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAAACCACACCATCTTGTaGCTGGGAGGACAACAGCTC +
Preference number: 5 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVNHTIL*LGGQQL
Trigger: GAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTT...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATAACCACACCATCTTGTaGCTGGGAGGACAACAGCTC +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHNHTIL*LGGQQL
Trigger: GAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCGCGGGTGAATCTGAATaGTTCCAGCTCCACCTAGAA +
Preference number: 5 (lower is better)
Translates to: QLLQDADRGVCGDVREEGAGESE*FQLHLE
Trigger: TTCTAGGTGGAGCTGGAACAATTCAGATTCACCCGC...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTTTGAGTCCAGGAGTTaGAGGCCAGTCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGFESRS*RPVWAT
Trigger: TGTTGCCCAGACTGGCCTCAAACTCCTGGACTCAAA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCTTGATGCCCTACGTCTaGACTGGTGGGGGCAATTTT +
Preference number: 5 (lower is better)
Translates to: QLLQDADRGVCGDVREEGLMPYV*TGGGNF
Trigger: AAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAA...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCGAGGACTTCGCTTTTaGGTGTTCCGAGAGCCCATA +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHRGLRF*VFREPI
Trigger: TATGGGCTCTCGGAACACCAAAAAGCGAAGTCCTCG...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446349.5
CDS TCA 90 bp GTATCAGGTGCTACCTTACGCTCTGCAAAGCTGCCCTGTCATTACTaGTGGCTCATGTTGATGCCCTACGTCTTGACTGGTGGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: VSGATLRSAKLPCHY*WLMLMPYVLTGGGN
Trigger: ATTGCCCCCACCAGTCAAGACGTAGGGCATCAACATGAGCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCACCTGATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCGAGAAGGCAGACTCTaGGTTTCTAAGTGCTCCACT +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGREGRL*VSKCST
Trigger: AGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTTCAGAATCGCTGTCTaGAGGGGCCAGAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFFRIAV*RGQRAL
Trigger: AAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTTTCAGAATCGCTGTCTaGAGGGGCCAGAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTFRIAV*RGQRAL
Trigger: AAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAA...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGAGGAGCCTGGAGCATTaGAAGATGGAGACACAGAAC +
Preference number: 5 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLRSLEH*KMETQN
Trigger: GTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCACAAGAGGCATCTTTaGATCCACTCCTCCCTTAAG +
Preference number: 5 (lower is better)
Translates to: QLLQDADRGVCGDVREEGHKRHL*IHSSLK
Trigger: CTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTCAAGGAGGATGCCCTaGGGAAAGAGGAATGAACTT +
Preference number: 5 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCSRRMP*GKRNEL
Trigger: AAGTTCATTCCTCTTTCCCAAGGGCATCCTCCTTGA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGATAACCACACCATCTaGTTGCTGGGAGGACAACAG +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGDNHTI*LLGGQQ
Trigger: CTGTTGTCCTCCCAGCAACAAGATGGTGTGGTTATC...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCAGTATTTCCTGGATTaGTTCCTGGCAACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGQYFLD*FLATSL
Trigger: CAGCGAGGTTGCCAGGAACAAATCCAGGAAATACTG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACAGTATTTCCTGGATTaGTTCCTGGCAACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGQYFLD*FLATSL
Trigger: CAGCGAGGTTGCCAGGAACAAATCCAGGAAATACTG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCAGAGGGCTTTTTCGCTaGCCCTCAAATGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSRGLFR*PSNAHF
Trigger: GAAATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACCAGAATGGCAAATCTaGACCTCATCTAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEPEWQI*TSSSPA
Trigger: GGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTTGGCCATCCTTGTCTTaGCATTCAACAGCGCCAAAG +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGWPSLS*HSTAPK
Trigger: CTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGGAGGTCACAGAATCTTaGCCACCTTTACCGAGACTG +
Preference number: 5 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLEVTES*PPLPRL
Trigger: CAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCTC...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCAGACTCCCAAGCATTaGGTCCCCGGTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIQTPKH*VPGLRS
Trigger: TGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCAGACTCCCAAGCATTaGGTCCCCGGTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEQTPKH*VPGLRS
Trigger: TGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAGAACCCGGGCTTTCATaGACAAGCTCAGCTAATCAG +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGEPGLS*TSSANQ
Trigger: CTGATTAGCTGAGCTTGTCAATGAAAGCCCGGGTTC...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTGTGAAGACACCTTCTaGGCTGGGGTACAAACCCCC +
Preference number: 5 (lower is better)
Translates to: KPQDDQNTLRVPVLRASACEDTF*AGVQTP
Trigger: GGGGGTTTGTACCCCAGCCAAGAAGGTGTCTTCACA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp TCATGCGTGTGTTCTGAGATGTCCCGGCCATTGATTAACACGATTTaGTCCCCTTCGTTCAGCTTAGGAATGCAGGTGTCCGCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: SCVCSEMSRPLINTI*SPSFSLGMQVSAGD
Trigger: GTCACCTGCGGACACCTGCATTCCTAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACACACGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp CCTCGTTCTGTGAGAGTCGTCAACATGACAATGAGTGACAACTTCTaGTCCCAGACAACCTGCCAAAACTGTGCACAGGTATGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: PRSVRVVNMTMSDNF*SQTTCQNCAQVCGR
Trigger: CCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTGGGATCAGAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
ENST00000497739.1
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCTGGGTCAGGTAGCTTaGTGCCGGATTGTTCTCGGA +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLILGQVA*CRIVLG
Trigger: TCCGAGAACAATCCGGCACAAAGCTACCTGACCCAG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAACACAAGAGGCATCTTTaGATCCACTCCTCCCTTAAG +
Preference number: 5 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEHKRHL*IHSSLK
Trigger: CTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTG...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGACTCCCGGCTGGCTTaGATGAACATCACCACTTGG +
Preference number: 5 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLDSRLA*MNITTW
Trigger: CCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCAGTTCATCTTCAGACTaGAAGTCAGCAAATGAGCGG +
Preference number: 5 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSSSSSD*KSANER
Trigger: CCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACT...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CGAAGAATCGCTTCACACACAAACTTGTACTGGCTTGATGTCTGCACCATCATGTGTGTTCTTCCCCGGTaGACACGCTTGCCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: RRIASHTNLYWLDVCTIMCVLPR*TRLPGA
Trigger: TGCACCTGGCAAGCGTGTCAACCGGGGAAGAACACA...CATGATGGTGCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGCGATTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCAAACTTGTACTGGCTaGATGTCTGCACCATCATGG +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHQTCTG*MSAPSW
Trigger: CCATGATGGTGCAGACATCAAGCCAGTACAAGTTTG...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTGCACCATCATGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAGCTTCACACACAAACTaGTACTGGCTTGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: LHHHGALVSHFSDNIQWVASHTN*YWLDVC
Trigger: GCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGC...TACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CAA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGGCTTCACACACAAACTaGTACTGGCTTGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLASHTN*YWLDVC
Trigger: GCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGC...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGCTTCACACACAAACTaGTACTGGCTTGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGASHTN*YWLDVC
Trigger: GCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGC...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCAACCACACCATCTTGTaGCTGGGAGGACAACAGCTC +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFNHTIL*LGGQQL
Trigger: GAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTT...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCGGTGAATGCACACATTaGTTCTTCCATACAGAGACT +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVGECTH*FFHTET
Trigger: AGTCTCTGTATGGAAGAACAAATGTGTGCATTCACC...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCAGGTCTTCATCCGTCTaGCTACCAGCAAACTATTCA +
Preference number: 5 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCRSSSV*LPANYS
Trigger: TGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCT...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATATAATCCCAACAGTTTaGGAGGCTGAGGTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHIIPTV*EAEVGR
Trigger: TCTTCCCACCTCAGCCTCCAAAACTGTTGGGATTAT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTATAATCCCAACAGTTTaGGAGGCTGAGGTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAIIPTV*EAEVGR
Trigger: TCTTCCCACCTCAGCCTCCAAAACTGTTGGGATTAT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACTCCATCCCCCTTTCTaGGAGCTTGCTGAATTTTTG +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGLHPPF*ELAEFL
Trigger: CAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGAG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTCTGCTGCCTCTTTGTaGCCTCTGGAGGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: KPQDDQNTLRVPVLRASASAASL*PLEDEE
Trigger: CTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTAGGACAGGCCCCAAACTGATTTCTGCTGCCTCTTaGTTGCCTCTGGAGGATGAA +
Preference number: 5 (lower is better)
Translates to: RGVCGDVREEGIRTGPKLISAAS*LPLEDE
Trigger: TTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAAT...CAGTTTGGGGCCTGTCCTAATGCCTTCTTCCCTAACATCACCACACACACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTTTGAGTCCAGGAGTTaGAGGCCAGTCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFFESRS*RPVWAT
Trigger: TGTTGCCCAGACTGGCCTCAAACTCCTGGACTCAAA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATGCACAGTTCCGGGCTTaGTACATGGTACTACTTTGT +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHAQFRA*YMVLLC
Trigger: ACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGC...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAGCACAGTTCCGGGCTTaGTACATGGTACTACTTTGT +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGAQFRA*YMVLLC
Trigger: ACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGC...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCATTACAACCTCCTATTaGCACAGTTCCGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: QLLQDADRGVCGDVREEGITTSY*HSSGLC
Trigger: ACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAAT...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCGGGATAGACATTCCATaGTCTGGCCAAGATGACAAA +
Preference number: 5 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCGIDIP*SGQDDK
Trigger: TTTGTCATCTTGGCCAGACAATGGAATGTCTATCCC...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS GCA 90 bp ACTGTTCTGAACACTGTGCCAGGATCCATCCACCCAAGCTCCATCTaGATGAAGTTGCTAAAAGGAGGGGAGTCTGTGAAGACACCTTCT +
Preference number: 5 (lower is better)
Translates to: TVLNTVPGSIHPSSI*MKLLKGGESVKTPS
Trigger: AGAAGGTGTCTTCACAGACTCCCCTCCTTTTAGCAACTTCATGCAGATGGAGCTTGGGTGGATGGATCCTGGCACAGTGTTCAGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGTTCAGAATCGCTGTCTaGAGGGGCCAGAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLFRIAV*RGQRAL
Trigger: AAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAA...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTACTCTGGGTTTATCCTaGATACCACAAGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: TILLLGGQQLCGCPVSIATLGLS*IPQEAS
Trigger: AGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTGCGGGTGAATCTGAATaGTTCCAGCTCCACCTAGAA +
Preference number: 5 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAAGESE*FQLHLE
Trigger: TTCTAGGTGGAGCTGGAACAATTCAGATTCACCCGC...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAGCTATGAGAATGGTGGCCCAGCCCGGCCATCAGACTCCCAAGCATTTGGTCCAGCAAACTATTCAATaGGCACCGAATTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: RAMRMVAQPGHQTPKHLVQQTIQ*APNLLN
Trigger: ATTCAGCAAATTCGGTGCCAATTGAATAGTTTGCTG...GACCAAATGCTTGGGAGTCTGATGGCCGGGCTGGGCCACCATTCTCATAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAAGGTCTTCATCCGTCTaGCTACCAGCAAACTATTCA +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGRSSSV*LPANYS
Trigger: TGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCT...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTATGGCATTTAAATTTTaGCCAGCGTTCCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAMAFKF*PAFPPS
Trigger: GGATGGAGGGAACGCTGGCAAAAATTTAAATGCCAT...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATATGGCATTTAAATTTTaGCCAGCGTTCCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHMAFKF*PAFPPS
Trigger: GGATGGAGGGAACGCTGGCAAAAATTTAAATGCCAT...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTCAGTATTTCCTGGATTaGTTCCTGGCAACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAQYFLD*FLATSL
Trigger: CAGCGAGGTTGCCAGGAACAAATCCAGGAAATACTG...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATCTGAGGGACAAACTCTaGGTGACAAGTCTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHLRDKL*VTSLRN
Trigger: ATTTCTGAGACTTGTCACCAAGAGTTTGTCCCTCAG...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTGGCCATCCTTGTCTTaGCATTCAACAGCGCCAAAG +
Preference number: 5 (lower is better)
Translates to: KPQDDQNTLRVPVLRASAWPSLS*HSTAPK
Trigger: CTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTAGAAGGTGGCCATCCTaGTCTTTGCATTCAACAGCG +
Preference number: 5 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTRRWPS*SLHSTA
Trigger: CGCTGTTGAATGCAAAGACAAGGATGGCCACCTTCT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCAACTCCAGACCTGTTTaGTGGGCAAGTCGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSNSRPV*WASRGR
Trigger: CCTGCCACGACTTGCCCACAAAACAGGTCTGGAGTT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp GCAGACTCTTGGTTTCTAAGTGCTCCACTGATAAGGATCTCCGCATaGCTGGGTTCCACACCATCCCGCCAATCACCTTTTTGCAATATT +
Preference number: 5 (lower is better)
Translates to: ADSWFLSAPLIRISA*LGSTPSRQSPFCNI
Trigger: AATATTGCAAAAAGGTGATTGGCGGGATGGTGTGGAACCCAGCCATGCGGAGATCCTTATCAGTGGAGCACTTAGAAACCAAGAGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGAATCATTAGGTCTAAATaGTGCAGATCCCTACCACTG +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGIIRSK*CRSLPL
Trigger: CAGTGGTAGGGATCTGCACAATTTAGACCTAATGAT...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGATTATTTACCGACTTTTaGGTGTTCCGAGAGCCCATA +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGLFTDF*VFREPI
Trigger: TATGGGCTCTCGGAACACCAAAAAGTCGGTAAATAA...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp TTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTGGCCATTTATTTACCGACTTTTaGGTGTTCCGAGAGCCCATA +
Preference number: 5 (lower is better)
Translates to: LPRLLSAEDNRQEPEGGHLFTDF*VFREPI
Trigger: TATGGGCTCTCGGAACACCAAAAAGTCGGTAAATAA...ATGGCCACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTCGAGAAGGCAGACTCTaGGTTTCTAAGTGCTCCACT +
Preference number: 5 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFREGRL*VSKCST
Trigger: AGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCG...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTAGGAGCCTGGAGCATTaGAAGATGGAGACACAGAAC +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIRSLEH*KMETQN
Trigger: GTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTGCGGGTGAATCTGAATaGTTCCAGCTCCACCTAGAA +
Preference number: 5 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLAGESE*FQLHLE
Trigger: TTCTAGGTGGAGCTGGAACAATTCAGATTCACCCGC...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAAATGGGCAGGTGGTGAATGCACACATTaGTTCTTCCATACAGAGACT +
Preference number: 5 (lower is better)
Translates to: WRAGLAFFGQYPVGKWAGGECTH*FFHTET
Trigger: AGTCTCTGTATGGAAGAACAAATGTGTGCATTCACC...ACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CAA 90 bp CAATTGCTCCAGGATGCCGACAGGGGTGTGTGTGGTGATGTTAGGGAAGAAGGCCAATTGGCACCGAATTaGCTGAATATCAAAATGGCT +
Preference number: 5 (lower is better)
Translates to: QLLQDADRGVCGDVREEGQLAPN*LNIKMA
Trigger: AGCCATTTTGATATTCAGCAAATTCGGTGCCAATTG...GCCTTCTTCCCTAACATCACCACACACACCCCTGTCGGCATCCTGGAGCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCCTTTCCCACAGCTACTGGTTCCTCTTGCTGCTTCCAGAGAGGTCTGTCCTCCCAGGGATCTCTCATCTaGATTAAATTGGCACATCAA +
Preference number: 5 (lower is better)
Translates to: SFPTATGSSCCFQRGLSSQGSLI*IKLAHQ
Trigger: TTGATGTGCCAATTTAATCAAGATGAGAGATCCCTG...GGAGGACAGACCTCTCTGGAAGCAGCAAGAGGAACCAGTAGCTGTGGGAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCCAGAATGGCAAATCTaGACCTCATCTAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIPEWQI*TSSSPA
Trigger: GGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTCCAGAATGGCAAATCTaGACCTCATCTAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFPEWQI*TSSSPA
Trigger: GGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGG...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTAGAAGGTGGCCATCCTaGTCTTTGCATTCAACAGCG +
Preference number: 5 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLRRWPS*SLHSTA
Trigger: CGCTGTTGAATGCAAAGACAAGGATGGCCACCTTCT...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTAGAAGGTGGCCATCCTaGTCTTTGCATTCAACAGCG +
Preference number: 5 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFRRWPS*SLHSTA
Trigger: CGCTGTTGAATGCAAAGACAAGGATGGCCACCTTCT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGAGAAGGTGGCCATCCTaGTCTTTGCATTCAACAGCG +
Preference number: 5 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEERRWPS*SLHSTA
Trigger: CGCTGTTGAATGCAAAGACAAGGATGGCCACCTTCT...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCATCAGACTCCCAAGCATTTGGTCCCCGGTCTGAGGTCACAGAATCTTTGCTCACCAAATGCTGCCTaGTCATATATTGAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: GHQTPKHLVPGLRSQNLCSPNAA*SYIEQS
Trigger: ACTTTGCTCAATATATGACAAGGCAGCATTTGGTGA...GCAAAGATTCTGTGACCTCAGACCGGGGACCAAATGCTTGGGAGTCTGATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGCCCCACGGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAATTGAACACCTGGCCTaGAGAGACAGTATAACATAC +
Preference number: 5 (lower is better)
Translates to: SPTANPPEAGFPMVQLLEIEHLA*RDSITY
Trigger: GTATGTTATACTGTCTCTCAAGGCCAGGTGTTCAAT...TTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCCGTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTCCATCTGCATGAAGTaGCTAAAAGGAGGGGAGTCT +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFSICMK*LKGGES
Trigger: AGACTCCCCTCCTTTTAGCAACTTCATGCAGATGGA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTTCCATCTGCATGAAGTaGCTAAAAGGAGGGGAGTCT +
Preference number: 5 (lower is better)
Translates to: KPQDDQNTLRVPVLRASASICMK*LKGGES
Trigger: AGACTCCCCTCCTTTTAGCAACTTCATGCAGATGGA...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCATAAAAATACGGTTTaGGTCCAAGGTATCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGHKNTV*VQGIRC
Trigger: GCACCTGATACCTTGGACCAAAACCGTATTTTTATG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp CACTGTGCAGTTCTACTCCATAGAAGTCGAGGGTCCGCGCTATGTTaGTATAGCAGGATTCTGCTTCTGATTGTTTTAGCCCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: HCAVLLHRSRGSALC*YSRILLLIVLAHCA
Trigger: AGCACAGTGGGCTAAAACAATCAGAAGCAGAATCCTGCTATATCAACATAGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTAACCTGGCCAGTGTCTaGTTTAGTAACTTTAAAGGT +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGNLASV*FSNFKG
Trigger: ACCTTTAAAGTTACTAAACAAGACACTGGCCAGGTT...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CAA 90 bp CCACCTTTACCGAGACTGCTCTCAGCTGAGGACAACAGGCAAGAACCAGAAGGTCCGCCAATCACCTTTTaGCAATATTGGTTATTTACC +
Preference number: 5 (lower is better)
Translates to: PPLPRLLSAEDNRQEPEGPPITF*QYWLFT
Trigger: GGTAAATAACCAATATTGCAAAAAGGTGATTGGCGG...ACCTTCTGGTTCTTGCCTGTTGTCCTCAGCTGAGAGCAGTCTCGGTAAAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTCCGCCAATCACCTTTTaGCAATATTGGTTATTTACC +
Preference number: 5 (lower is better)
Translates to: TILLLGGQQLCGCPVSIAPPITF*QYWLFT
Trigger: GGTAAATAACCAATATTGCAAAAAGGTGATTGGCGG...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp TGGCGCGCTGGTCTCGCATTTTTCGGACAATATCCAGTGGGTAAATGGGCAGGTTGTAGGTCATTTCATTaGCAAGGTTATCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: WRAGLAFFGQYPVGKWAGCRSFH*QGYLQK
Trigger: CTTCTGCAGATAACCTTGCAAATGAAATGACCTACA...ACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS-3UTR CAA 90 bp ACCATCTTGTTGCTGGGAGGACAACAGCTCTGTGGGTGTCCGGTCTCAATTGCTTGTAGGTCATTTCATTaGCAAGGTTATCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: TILLLGGQQLCGCPVSIACRSFH*QGYLQK
Trigger: CTTCTGCAGATAACCTTGCAAATGAAATGACCTACA...AGCAATTGAGACCGGACACCCACAGAGCTGTTGTCCTCCCAGCAACAAGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCACTCTGGGTTTATCCTaGATACCACAAGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFTLGLS*IPQEAS
Trigger: AGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGT...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTACTCTGGGTTTATCCTaGATACCACAAGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTTLGLS*IPQEAS
Trigger: AGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTAGTTCATCTTCAGACTaGAAGTCAGCAAATGAGCGG +
Preference number: 5 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTSSSSD*KSANER
Trigger: CCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACT...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCAAACTTGTACTGGCTaGATGTCTGCACCATCATGG +
Preference number: 5 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEQTCTG*MSAPSW
Trigger: CCATGATGGTGCAGACATCAAGCCAGTACAAGTTTG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTGGTGTCCGGTCTCAATaGCTCCAGGATGCCGACAGG +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPGVRSQ*LQDADR
Trigger: CCTGTCGGCATCCTGGAGCAATTGAGACCGGACACC...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGGATAACCACACCATCTaGTTGCTGGGAGGACAACAG +
Preference number: 5 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLDNHTI*LLGGQQ
Trigger: CTGTTGTCCTCCCAGCAACAAGATGGTGTGGTTATC...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CTTCCAGAGAGGTCTGTCCTCCTCTTTCAAGGAGGATGCCCTTGGGAAAGAGGACAATTGGCACCGAATTaGCTGAATATCAAAATGGCT +
Preference number: 5 (lower is better)
Translates to: LPERSVLLFQGGCPWERGQLAPN*LNIKMA
Trigger: AGCCATTTTGATATTCAGCAAATTCGGTGCCAATTG...TCCTCTTTCCCAAGGGCATCCTCCTTGAAAGAGGAGGACAGACCTCTCTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AAGCCACAAGATGACCAGAACACACTGAGAGTACCAGTTCTCAGAGCCTCAGCTAGGTCTTCATCCGTCTaGCTACCAGCAAACTATTCA +
Preference number: 5 (lower is better)
Translates to: KPQDDQNTLRVPVLRASARSSSV*LPANYS
Trigger: TGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCT...AGCTGAGGCTCTGAGAACTGGTACTCTCAGTGTGTTCTGGTCATCTTGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTATAATCCCAACAGTTTaGGAGGCTGAGGTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIIIPTV*EAEVGR
Trigger: TCTTCCCACCTCAGCCTCCAAAACTGTTGGGATTAT...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTCTCCATCCCCCTTTCTaGGAGCTTGCTGAATTTTTG +
Preference number: 5 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFLHPPF*ELAEFL
Trigger: CAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGAG...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCTGGCCATCCTTGTCTTaGCATTCAACAGCGCCAAAG +
Preference number: 5 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSWPSLS*HSTAPK
Trigger: CTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAATGGCCATCCTTGTCTTaGCATTCAACAGCGCCAAAG +
Preference number: 5 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEWPSLS*HSTAPK
Trigger: CTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTATCAGAAACAGCAGTaGTGGAGGCTCACAATGAAG +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFYQKQQ*WRLTMK
Trigger: CTTCATTGTGAGCCTCCACAACTGCTGTTTCTGATA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTAGGCCTTCGGCAGCATaGCGCAGGTCAGGAAGCGCC +
Preference number: 5 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSRPSAA*RRSGSA
Trigger: GGCGCTTCCTGACCTGCGCAATGCTGCCGAAGGCCT...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp GGGCCAGAGAGCCCTTGTACGTGTAAAATACATCTTCCGTTTCCGTaGTGTAGGTCATTTCATTTGCAAGGTTATCTGCAGAAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: GPESPCTCKIHLPFP*CRSFHLQGYLQKSG
Trigger: GCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTATTTTACACGTACAAGGGCTCTCTGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 90 bp AAAAATACGGTTTTGGTCCAAGGTATCAGGTGCTACCTTACGCTCTaGAAAGCTGCCCTGTCATTACTGATGGCTCATGTTGATGCCCTA +
Preference number: 5 (lower is better)
Translates to: KNTVLVQGIRCYLTL*KAALSLLMAHVDAL
Trigger: TAGGGCATCAACATGAGCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGACCAAAACCGTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCTTATTTACCGACTTTTaGGTGTTCCGAGAGCCCATA +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFLFTDF*VFREPI
Trigger: TATGGGCTCTCGGAACACCAAAAAGTCGGTAAATAA...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCCGAGGACTTCGCCAGTaGGGAGTAATGGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: FGRLFRNLCDRNGCISATRGLRQ*GVMGGE
Trigger: TTCCCCTCCCATTACTCCCAACTGGCGAAGTCCTCG...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGGCTTCACACACAAACTaGTACTGGCTTGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLASHTN*YWLDVC
Trigger: GCAGACATCAAGCCAGTACAAGTTTGTGTGTGAAGC...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACCCCTTTCTTGGAGCTaGCTGAATTTTTGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: HLNFCQRSLHPPFLELAEPLSWS*LNFCES
Trigger: GGACTCACAAAAATTCAGCAAGCTCCAAGAAAGGGG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCTCCATCCCCCTTTCTaGGAGCTTGCTGAATTTTTG +
Preference number: 5 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSLHPPF*ELAEFL
Trigger: CAAAAATTCAGCAAGCTCCAAGAAAGGGGGATGGAG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCTGAGGGACAAACTCTaGGTGACAAGTCTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLILRDKL*VTSLRN
Trigger: ATTTCTGAGACTTGTCACCAAGAGTTTGTCCCTCAG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCTTCACACAAATCCTTaGGTTGCTCCAAACAGAATG +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFLHTNP*VAPNRM
Trigger: CATTCTGTTTGGAGCAACCAAAGGATTTGTGTGAAG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGGGGATAGACATTCCATaGTCTGGCCAAGATGACAAA +
Preference number: 5 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEGIDIP*SGQDDK
Trigger: TTTGTCATCTTGGCCAGACAATGGAATGTCTATCCC...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACCTCAGCCTGTGACTTaGCTCCTCTGCCTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIPQPVT*LLCLGS
Trigger: GCTCCCCAGGCAGAGGAGCAAAGTCACAGGCTGAGG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp ACTAGAAGTTTCCAGGACCTCCAAGCTGAATTCTGCACTCATCTCTaGGCAACCAGCAAATGTAACTTCCAAACTCCAGACCTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: TRSFQDLQAEFCTHL*ATSKCNFQTPDLFC
Trigger: ACAAAACAGGTCTGGAGTTTGGAAGTTACATTTGCTGGTTGCCCAGAGATGAGTGCAGAATTCAGCTTGGAGGTCCTGGAAACTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTATCATTAGGTCTAAATaGTGCAGATCCCTACCACTG +
Preference number: 5 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFIIRSK*CRSLPL
Trigger: CAGTGGTAGGGATCTGCACAATTTAGACCTAATGAT...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCCGCCAATCACCTTTTaGCAATATTGGTTATTTACC +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFPPITF*QYWLFT
Trigger: GGTAAATAACCAATATTGCAAAAAGGTGATTGGCGG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS-3UTR CAA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGACTCCCGGCTGGCTTaGATGAACATCACCACTTGG +
Preference number: 5 (lower is better)
Translates to: FGRLFRNLCDRNGCISATDSRLA*MNITTW
Trigger: CCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGGTGTCCGGTCTCAATaGCTCCAGGATGCCGACAGG +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIGVRSQ*LQDADR
Trigger: CCTGTCGGCATCCTGGAGCAATTGAGACCGGACACC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGTGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCAATTGGCACCGAATTaGCTGAATATCAAAATGGCT +
Preference number: 5 (lower is better)
Translates to: RWPSLSLHSTAPKSEGQTQLAPN*LNIKMA
Trigger: AGCCATTTTGATATTCAGCAAATTCGGTGCCAATTG...AGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCAGCAAACTATTCAATaGGCACCGAATTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFQQTIQ*APNLLN
Trigger: ATTCAGCAAATTCGGTGCCAATTGAATAGTTTGCTG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCAGGTCTTCATCCGTCTaGCTACCAGCAAACTATTCA +
Preference number: 5 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSRSSSV*LPANYS
Trigger: TGAATAGTTTGCTGGTAGCAAGACGGATGAAGACCT...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCAGGGATCTCTCATCTaGATTAAATTGGCACATCAA +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFQGSLI*IKLAHQ
Trigger: TTGATGTGCCAATTTAATCAAGATGAGAGATCCCTG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CATTTAAATTTTTGCCAGCGTTCCCTCCATCCCCCTTTCTTGGAGCTTGCTGAACTGAGGGACAAACTCTaGGTGACAAGTCTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: HLNFCQRSLHPPFLELAELRDKL*VTSLRN
Trigger: ATTTCTGAGACTTGTCACCAAGAGTTTGTCCCTCAG...TTCAGCAAGCTCCAAGAAAGGGGGATGGAGGGAACGCTGGCAAAAATTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAGAACCCAACCCGAGCTaGGGAGACTTCCTAGGAATC +
Preference number: 5 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQEPNPS*GDFLGI
Trigger: GATTCCTAGGAAGTCTCCCAAGCTCGGGTTGGGTTC...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTGAACCCAACCCGAGCTaGGGAGACTTCCTAGGAATC +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPEPNPS*GDFLGI
Trigger: GATTCCTAGGAAGTCTCCCAAGCTCGGGTTGGGTTC...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCAAGGAACTGGCTTTTaGAGATGGGAATGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIQGTGF*RWECFK
Trigger: TTTGAAGCATTCCCATCTCAAAAAGCCAGTTCCTTG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATGTGAAGACACCTTCTaGGCTGGGGTACAAACCCCC +
Preference number: 5 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQCEDTF*AGVQTP
Trigger: GGGGGTTTGTACCCCAGCCAAGAAGGTGTCTTCACA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp CACAGGATTTCCACAAGTTTTTGCAAGATCGGTAATTCAGCATGTTaGAGGCCACAATATGTTCCCTGGATTCAGCCTGTTTCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: HRISTSFCKIGNSAC*RPQYVPWIQPVSVA
Trigger: AGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAAAACTTGTGGAAATCCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 90 bp CGTGTAAAATACATCTTCCGTTTCCGTGATGTAGGTCATTTCATTTaGAAGGTTATCTGCAGAAGAGTGGCGTGGCTTTCGGATTTCGTG +
Preference number: 5 (lower is better)
Translates to: RVKYIFRFRDVGHFI*KVICRRVAWLSDFV
Trigger: CACGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTATTTTACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGTGCCTGGTTTGTTCTaGCTGCAGTGTGTTGGGATC +
Preference number: 5 (lower is better)
Translates to: FGRLFRNLCDRNGCISATVPGLF*LQCVGI
Trigger: GATCCCAACACACTGCAGCAAGAACAAACCAGGCAC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CAA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGATCATTAGGTCTAAATaGTGCAGATCCCTACCACTG +
Preference number: 5 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLIIRSK*CRSLPL
Trigger: CAGTGGTAGGGATCTGCACAATTTAGACCTAATGAT...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTTGTAGGTCATTTCATTaGCAAGGTTATCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLICRSFH*QGYLQK
Trigger: CTTCTGCAGATAACCTTGCAAATGAAATGACCTACA...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGCTGGGTCAGGTAGCTTaGTGCCGGATTGTTCTCGGA +
Preference number: 5 (lower is better)
Translates to: NRNLELRILSGNSYRIYLLGQVA*CRIVLG
Trigger: TCCGAGAACAATCCGGCACAAAGCTACCTGACCCAG...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTAACCACACCATCTTGTaGCTGGGAGGACAACAGCTC +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPNHTIL*LGGQQL
Trigger: GAGCTGTTGTCCTCCCAGCAACAAGATGGTGTGGTT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GATGACACTGTCCCATCTCCCCTTGGGAAAATCATAAGGTTTCAAGTGGAGGAGCAATTGGCACCGAATTaGCTGAATATCAAAATGGCT +
Preference number: 5 (lower is better)
Translates to: DDTVPSPLGKIIRFQVEEQLAPN*LNIKMA
Trigger: AGCCATTTTGATATTCAGCAAATTCGGTGCCAATTG...CTCCTCCACTTGAAACCTTATGATTTTCCCAAGGGGAGATGGGACAGTGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCAGCAAACTATTCAATaGGCACCGAATTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIQQTIQ*APNLLN
Trigger: ATTCAGCAAATTCGGTGCCAATTGAATAGTTTGCTG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTCCCCATTTCTGCTGCCTCTTTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCCTTTCTGGTGGTTTCTaGTTTTCAATATGGGGTTAT +
Preference number: 5 (lower is better)
Translates to: FPISAASLLPLEDEEGFFLSGGF*FSIWGY
Trigger: ATAACCCCATATTGAAAACAAGAAACCACCAGAAAG...GAAAAAGCCCTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCAGTGGATTCTATTTTaGACTGATGTGTTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIQWILF*TDVFLG
Trigger: GCCCAAAAACACATCAGTCAAAAATAGAATCCACTG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGGCCATCCTTGTCTTTGCATTCAACAGCGCCAAAGTCTGAGGGACAAACTCTTCAGTGGATTCTATTTTaGACTGATGTGTTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: WPSLSLHSTAPKSEGQTLQWILF*TDVFLG
Trigger: GCCCAAAAACACATCAGTCAAAAATAGAATCCACTG...AAGAGTTTGTCCCTCAGACTTTGGCGCTGTTGAATGCAAAGACAAGGATGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCAGGGATCTCTCATCTaGATTAAATTGGCACATCAA +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLIQGSLI*IKLAHQ
Trigger: TTGATGTGCCAATTTAATCAAGATGAGAGATCCCTG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATCTGCTGCCTCTTTGTaGCCTCTGGAGGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQSAASL*PLEDEE
Trigger: CTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCTTCACACAAATCCTTaGGTTGCTCCAAACAGAATG +
Preference number: 5 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSLHTNP*VAPNRM
Trigger: CATTCTGTTTGGAGCAACCAAAGGATTTGTGTGAAG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TCTTGTTTTCAATATGGGGTTATGGTACTGTGTGACATCTCCCTCCCACCTCTGCTTCACACAAATCCTTaGGTTGCTCCAAACAGAATG +
Preference number: 5 (lower is better)
Translates to: SCFQYGVMVLCDISLPPLLHTNP*VAPNRM
Trigger: CATTCTGTTTGGAGCAACCAAAGGATTTGTGTGAAG...CAGAGGTGGGAGGGAGATGTCACACAGTACCATAACCCCATATTGAAAACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGTTGCCTCTGGAGGATGAAGAGGGCTTTTTCGCTTGCCCTCAAATGCTCATTCTGCCTTGTCATATATaGAGCAAAGTTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: LLPLEDEEGFFACPQMLILPCHI*SKVSES
Trigger: TGACTCAGAAACTTTGCTCAATATATGACAAGGCAG...AATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCTTCATCCTCCAGAGGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp GGCCAACCCTCCAGAAGCTGGGTTTCCCATGGTTCAATTACTAGAAGCTCTTTTTCACCAAATGCTGCCTaGTCATATATTGAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: GQPSRSWVSHGSITRSSFSPNAA*SYIEQS
Trigger: ACTTTGCTCAATATATGACAAGGCAGCATTTGGTGA...AAAAGAGCTTCTAGTAATTGAACCATGGGAAACCCAGCTTCTGGAGGGTTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTTGATGCCCTACGTCTaGACTGGTGGGGGCAATTTT +
Preference number: 5 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPLMPYV*TGGGNF
Trigger: AAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp AAAGACAAGAGCTGTACATGTGAAAGATACATAAAAATACGGTTTTaGTCCAAGGTATCAGGTGCTACCTTACGCTCTGCAAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: KDKSCTCERYIKIRF*SKVSGATLRSAKLP
Trigger: GGGCAGCTTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGACCAAAACCGTATTTTTATGTATCTTTCACATGTACAGCTCTTGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCAGGAGCCTGGAGCATTaGAAGATGGAGACACAGAAC +
Preference number: 5 (lower is better)
Translates to: FGRLFRNLCDRNGCISATRSLEH*KMETQN
Trigger: GTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCT...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGACTCCCGGCTGGCTTaGATGAACATCACCACTTGG +
Preference number: 5 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYDSRLA*MNITTW
Trigger: CCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTCAAGGAGGATGCCCTaGGGAAAGAGGAATGAACTT +
Preference number: 5 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPSRRMP*GKRNEL
Trigger: AAGTTCATTCCTCTTTCCCAAGGGCATCCTCCTTGA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTGTGGCAGAAGACTGCTaGCAACCTTTGGTAGGCTTT +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPVAEDC*QPLVGF
Trigger: AAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCAC...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAGAGGTCACAGAATCTTaGCCACCTTTACCGAGACTG +
Preference number: 5 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQEVTES*PPLPRL
Trigger: CAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCTC...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGAGGTCACAGAATCTTaGCCACCTTTACCGAGACTG +
Preference number: 5 (lower is better)
Translates to: FGRLFRNLCDRNGCISATEVTES*PPLPRL
Trigger: CAGTCTCGGTAAAGGTGGCAAAGATTCTGTGACCTC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCGAACCCGGGCTTTCATaGACAAGCTCAGCTAATCAG +
Preference number: 5 (lower is better)
Translates to: FGRLFRNLCDRNGCISATEPGLS*TSSANQ
Trigger: CTGATTAGCTGAGCTTGTCAATGAAAGCCCGGGTTC...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCCACAAGAGGCATCTTTaGATCCACTCCTCCCTTAAG +
Preference number: 5 (lower is better)
Translates to: FGRLFRNLCDRNGCISATHKRHL*IHSSLK
Trigger: CTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTG...GGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCAAACTTGTACTGGCTaGATGTCTGCACCATCATGG +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPQTCTG*MSAPSW
Trigger: CCATGATGGTGCAGACATCAAGCCAGTACAAGTTTG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAATCAAGGAGGATGCCCTaGGGAAAGAGGAATGAACTT +
Preference number: 5 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQSRRMP*GKRNEL
Trigger: AAGTTCATTCCTCTTTCCCAAGGGCATCCTCCTTGA...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGGACAAACTCTTGGTGACAAGTCTCAGAAATGTGACATGTCTCTGTAGCAGCCTTTCTGGTGGTTTCTaGTTTTCAATATGGGGTTAT +
Preference number: 5 (lower is better)
Translates to: RDKLLVTSLRNVTCLCSSLSGGF*FSIWGY
Trigger: ATAACCCCATATTGAAAACAAGAAACCACCAGAAAG...GCTGCTACAGAGACATGTCACATTTCTGAGACTTGTCACCAAGAGTTTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTCCCCTTTCTTGGAGCTaGCTGAATTTTTGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPPLSWS*LNFCES
Trigger: GGACTCACAAAAATTCAGCAAGCTCCAAGAAAGGGG...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTAGAGGGCTTTTTCGCTaGCCCTCAAATGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPRGLFR*PSNAHF
Trigger: GAAATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTCTGCTGCCTCTTTGTaGCCTCTGGAGGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYSAASL*PLEDEE
Trigger: CTCTTCATCCTCCAGAGGCAACAAAGAGGCAGCAGA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp AAACCCAGATTCAAACGGGATAGACATTCCATTGTCTGGCCAAGATaGCAAAAGGGAAACCTCTTGAAATCTAATATAGACAGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: KPRFKRDRHSIVWPR*QKGNLLKSNIDRAE
Trigger: TTCTGCCCTGTCTATATTAGATTTCAAGAGGTTTCCCTTTTGTCATCTTGGCCAGACAATGGAATGTCTATCCCGTTTGAATCTGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGATCGAGTTTTCTCTTaGGGTAACTCCGAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIDRVFS*GNSEVR
Trigger: ACGCACCTCGGAGTTACCCAAAGAGAAAACTCGATC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTACTCTGGGTTTATCCTaGATACCACAAGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPTLGLS*IPQEAS
Trigger: AGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp CCTTTGGTAGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAAAGTTCATCTTCAGACTaGAAGTCAGCAAATGAGCGG +
Preference number: 5 (lower is better)
Translates to: PLVGFLEIYVTVMAAFLQSSSSD*KSANER
Trigger: CCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACT...TTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCTACCAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCGGTGAATGCACACATTaGTTCTTCCATACAGAGACT +
Preference number: 5 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPGECTH*FFHTET
Trigger: AGTCTCTGTATGGAAGAACAAATGTGTGCATTCACC...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTGTGGCAGAAGACTGCTaGCAACCTTTGGTAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSVAEDC*QPLVGF
Trigger: AAAGCCTACCAAAGGTTGCAAGCAGTCTTCTGCCAC...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGAGAGGGCTTTTTCGCTaGCCCTCAAATGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: NRNLELRILSGNSYRIYLRGLFR*PSNAHF
Trigger: GAAATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCT...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCCAGAATGGCAAATCTaGACCTCATCTAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSPEWQI*TSSSPA
Trigger: GGCTGGACTAGATGAGGTCAAGATTTGCCATTCTGG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGAAATACAGGCCTAAATGATGCCATAATTGCATGCTTATCTACACCAGTTCCTATCATTAGGTCTAAATaGTGCAGATCCCTACCACTG +
Preference number: 5 (lower is better)
Translates to: RNTGLNDAIIACLSTPVPIIRSK*CRSLPL
Trigger: CAGTGGTAGGGATCTGCACAATTTAGACCTAATGAT...AGGAACTGGTGTAGATAAGCATGCAATTATGGCATCATTTAGGCCTGTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCTGTAGGTCATTTCATTaGCAAGGTTATCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPCRSFH*QGYLQK
Trigger: CTTCTGCAGATAACCTTGCAAATGAAATGACCTACA...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACACAAGAGGCATCTTTaGATCCACTCCTCCCTTAAG +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIHKRHL*IHSSLK
Trigger: CTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGCCAGAACATAGGATGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCCAGCAAACTATTCAATaGGCACCGAATTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: CQNIGCKCLLHSYAAKFPQQTIQ*APNLLN
Trigger: ATTCAGCAAATTCGGTGCCAATTGAATAGTTTGCTG...GGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACATCCTATGTTCTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAATAATCCCAACAGTTTaGGAGGCTGAGGTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIIIPTV*EAEVGR
Trigger: TCTTCCCACCTCAGCCTCCAAAACTGTTGGGATTAT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATAGAGGGCTTTTTCGCTaGCCCTCAAATGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYRGLFR*PSNAHF
Trigger: GAAATGAGCATTTGAGGGCAAGCGAAAAAGCCCTCT...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATATTTCTGCTGCCTCTTaGTTGCCTCTGGAGGATGAA +
Preference number: 5 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYISAAS*LPLEDE
Trigger: TTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAAT...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTATTTCTGCTGCCTCTTaGTTGCCTCTGGAGGATGAA +
Preference number: 5 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSISAAS*LPLEDE
Trigger: TTCATCCTCCAGAGGCAACAAAGAGGCAGCAGAAAT...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACTTCACACAAATCCTTaGGTTGCTCCAAACAGAATG +
Preference number: 5 (lower is better)
Translates to: LILILWNISLPEWQILTSLHTNP*VAPNRM
Trigger: CATTCTGTTTGGAGCAACCAAAGGATTTGTGTGAAG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCAAACCTGGCCAGTGTCTaGTTTAGTAACTTTAAAGGT +
Preference number: 5 (lower is better)
Translates to: LILILWNISLPEWQILTSNLASV*FSNFKG
Trigger: ACCTTTAAAGTTACTAAACAAGACACTGGCCAGGTT...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS-3UTR CAA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTAGTTCATCTTCAGACTaGAAGTCAGCAAATGAGCGG +
Preference number: 5 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSSSSSD*KSANER
Trigger: CCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACT...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAATGGCATTTAAATTTTaGCCAGCGTTCCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIMAFKF*PAFPPS
Trigger: GGATGGAGGGAACGCTGGCAAAAATTTAAATGCCAT...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACTGAGGGACAAACTCTaGGTGACAAGTCTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIILRDKL*VTSLRN
Trigger: ATTTCTGAGACTTGTCACCAAGAGTTTGTCCCTCAG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATTATCAGAAACAGCAGTaGTGGAGGCTCACAATGAAG +
Preference number: 5 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYYQKQQ*WRLTMK
Trigger: CTTCATTGTGAGCCTCCACAACTGCTGTTTCTGATA...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATAGACTTCCTAGGAATCTaGAAGGAGCCTAGTTTTGAG +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIDFLGI*KEPSFE
Trigger: CTCAAAACTAGGCTCCTTCAAGATTCCTAGGAAGTC...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATGACTTCCTAGGAATCTaGAAGGAGCCTAGTTTTGAG +
Preference number: 5 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYDFLGI*KEPSFE
Trigger: CTCAAAACTAGGCTCCTTCAAGATTCCTAGGAAGTC...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTAATTTTGATTCTCTGGAATATCAGCCTCCCAGAATGGCAAATCTTGACCTCACTGCCTTGTCATATATaGAGCAAAGTTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: LILILWNISLPEWQILTSLPCHI*SKVSES
Trigger: TGACTCAGAAACTTTGCTCAATATATGACAAGGCAG...TGAGGTCAAGATTTGCCATTCTGGGAGGCTGATATTCCAGAGAATCAAAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AACAGGAATCTTGAGCTACGGATTTTAAGTGGTAATAGCTACAGGATTTACTTGATTGAACACCTGGCCTaGAGAGACAGTATAACATAC +
Preference number: 5 (lower is better)
Translates to: NRNLELRILSGNSYRIYLIEHLA*RDSITY
Trigger: GTATGTTATACTGTCTCTCAAGGCCAGGTGTTCAAT...CAAGTAAATCCTGTAGCTATTACCACTTAAAATCCGTAGCTCAAGATTCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATATTACAACCTCCTATTaGCACAGTTCCGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYITTSY*HSSGLC
Trigger: ACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAAT...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 90 bp GTCCTCATTTTGATCGGGTATAAAGTGACTATCGGAAAGATAGCCTaGATGATGTATGGAAGAATTATAGTCTCCAAAATGAGATTGTAC +
Preference number: 5 (lower is better)
Translates to: VLILIGYKVTIGKIA*MMYGRIIVSKMRLY
Trigger: GTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTATCTTTCCGATAGTCACTTTATACCCGATCAAAATGAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACAAGGAACTGGCTTTTaGAGATGGGAATGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIQGTGF*RWECFK
Trigger: TTTGAAGCATTCCCATCTCAAAAAGCCAGTTCCTTG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACATAAAAATACGGTTTaGGTCCAAGGTATCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIHKNTV*VQGIRC
Trigger: GCACCTGATACCTTGGACCAAAACCGTATTTTTATG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TGTAAATGTCTTCTCCATTCATATGCAGCCAAATTTCCCAGGCAAAATACTTATCAGTGGATTCTATTTTaGACTGATGTGTTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: CKCLLHSYAAKFPRQNTYQWILF*TDVFLG
Trigger: GCCCAAAAACACATCAGTCAAAAATAGAATCCACTG...ATAAGTATTTTGCCTGGGAAATTTGGCTGCATATGAATGGAGAAGACATTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACAGGGATCTCTCATCTaGATTAAATTGGCACATCAA +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIIQGSLI*IKLAHQ
Trigger: TTGATGTGCCAATTTAATCAAGATGAGAGATCCCTG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp TTGCATGCTTATCTACACCAGTTCCTATGTACACGATATCTTTTCTATAGAAGTCTGATTCACACCTATTaGGTATTGGAATCTCCATCT +
Preference number: 5 (lower is better)
Translates to: LHAYLHQFLCTRYLFYRSLIHTY*VLESPS
Trigger: AGATGGAGATTCCAATACCAAATAGGTGTGAATCAG...ACTTCTATAGAAAAGATATCGTGTACATAGGAACTGGTGTAGATAAGCATGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS-3UTR CAA 90 bp AGGCTTTTTAGAAATTTATGTGACCGTAATGGCTGCATTTCTGCAACCATAATACTGATTCACACCTATTaGGTATTGGAATCTCCATCT +
Preference number: 5 (lower is better)
Translates to: RLFRNLCDRNGCISATIILIHTY*VLESPS
Trigger: AGATGGAGATTCCAATACCAAATAGGTGTGAATCAG...TATTATGGTTGCAGAAATGCAGCCATTACGGTCACATAAATTTCTAAAAAGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 90 bp TTTCATTATTCCTTCAAATTTATAAAGGCCAAGGAACTGGCTTTTTaGGATGGGAATGCTTCAAACAGTATTACAACCTCCTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: FHYSFKFIKAKELAF*DGNASNSITTSYLH
Trigger: GTGCAAATAGGAGGTTGTAATACTGTTTGAAGCATTCCCATCTCAAAAAGCCAGTTCCTTGGCCTTTATAAATTTGAAGGAATAATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp ACCCACAGGGGCTCTGCACAAGCGGCGCCCACACACTaGCAGGGCCACTGTTCTGAACACTGTGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: THRGSAQAAPTH*QGHCSEHCARI
Trigger: GATCCTGGCACAGTGTTCAGAACAGTGGCCCTGCCAGTGTGTGGGCGCCGCTTGTGCAGAGCCCCTGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp CCGTGCCCCTCAGGCTGCGGCTCACCTGGGTGTTTGTaGCCAGCATTTCTCGGGACACATAGGCGATGGTGC +
Preference number: 6 (lower is better)
Translates to: PCPSGCGSPGCL*PAFLGTHRRWC
Trigger: GCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACCCAGGTGAGCCGCAGCCTGAGGGGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS TCA 72 bp GACAGCTCTCCTCCTGATCACCAGGGCCAGCTCCCGTaGGTGGGACTCCCGGCTGGCTTTGATGAACATCAC +
Preference number: 6 (lower is better)
Translates to: DSSPPDHQGQLP*VGLPAGFDEHH
Trigger: GTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp CCAAAGATGGGCTGGTACTATGGGTTCCGCTGTCAGTaGGCGCCCCTGCCCTTGAGGACCAGAACCCACAGG +
Preference number: 6 (lower is better)
Translates to: PKMGWYYGFRCQ*APLPLRTRTHR
Trigger: CCTGTGGGTTCTGGTCCTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCCATAGTACCAGCCCATCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp GCTCTCCTCCTGATCACCAGGGCCAGCTCCCGTGAGTaGGACTCCCGGCTGGCTTTGATGAACATCACCACT +
Preference number: 6 (lower is better)
Translates to: ALLLITRASSRE*DSRLALMNITT
Trigger: AGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp CCGTCCCGCTTTCGAGGCCCTTCTTTAGCTGTGCCATaGATCCCTCCAAAGTGTCCCCACCCTCCGGACACA +
Preference number: 6 (lower is better)
Translates to: PSRFRGPSLAVP*IPPKCPHPPDT
Trigger: TGTGTCCGGAGGGTGGGGACACTTTGGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAGCGGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp GGGTGGAAACAGCCCACCAAAGATGGGCTGGTACTATaGGTTCCGCTGTCAGTGAGCGCCCCTGCCCTTGAG +
Preference number: 6 (lower is better)
Translates to: GWKQPTKDGLVL*VPLSVSAPALE
Trigger: CTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGTTTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 90 bp CTGATCACCAGGGCCAGCTCCCGTGAGTGGGACTCCCGGCTGGCTTaGATGAACATCACCACTTGGTCATGCGTGTGTTCTGAGATGTCC +
Preference number: 6 (lower is better)
Translates to: LITRASSREWDSRLA*MNITTWSCVCSEMS
Trigger: GGACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 72 bp GTCGGAGGAGTCATCGGGCACACCGTGGTCAGGCCATaGGACGTACTGGAGATGTGTCACTGTGTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: VGGVIGHTVVRP*DVLEMCHCVFF
Trigger: GAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp GCAGGGATGAATGGGGTGGAAACAGCCCACCAAAGATaGGCTGGTACTATGGGTTCCGCTGTCAGTGAGCGC +
Preference number: 6 (lower is better)
Translates to: AGMNGVETAHQR*AGTMGSAVSER
Trigger: GCGCTCACTGACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGTTTCCACCCCATTCATCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp AGGGCCAGCTCCCGTGAGTGGGACTCCCGGCTGGCTTaGATGAACATCACCACTTGGTCATGCGTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: RASSREWDSRLA*MNITTWSCVCS
Trigger: AGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp CCTTTGGTCACCCTGTGGAAGTCATCTAAGAGCTGCTaGTCAACGCCGTCAGGTGAGCAGGAGCCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: PLVTLWKSSKSC*STPSGEQEPGA
Trigger: TGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp CTTGCCAGGTGCAAACAGAGTGCACACCTAGAAGCGTaGCCACCTGGGATGACAGTGGCCGCTGATTCAGCA +
Preference number: 6 (lower is better)
Translates to: LARCKQSAHLEA*PPGMTVAADSA
Trigger: TGCTGAATCAGCGGCCACTGTCATCCCAGGTGGTCACGCTTCTAGGTGTGCACTCTGTTTGCACCTGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262539.7
CDS CCA 72 bp ACTTCCAAACTCCAGACCTGTTTTGTGGGCAAGTCGTaGCAGGCCCCTCAGCCTGTGACTTTGCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: TSKLQTCFVGKS*QAPQPVTLLLC
Trigger: GCAGAGGAGCAAAGTCACAGGCTGAGGGGCCTGCCACGACTTGCCCACAAAACAGGTCTGGAGTTTGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS GCA 72 bp TTATCTGCAGAAGAGTGGCGTGGCTTTCGGATTTCGTaGCGGAGCCGAGGACTTCGCCAGTTGGGAGTAATG +
Preference number: 6 (lower is better)
Translates to: LSAEEWRGFRIS*RSRGLRQLGVM
Trigger: CATTACTCCCAACTGGCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS CCA 72 bp CATTCTTGTCACAGTAGTACTGGCTGGCGTCCTCGGTaGAGCCCCCTTTGGTCACCCTGTGGAAGTCATCTA +
Preference number: 6 (lower is better)
Translates to: HSCHSSTGWRPR*SPLWSPCGSHL
Trigger: TAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp TGGGACTCCCGGCTGGCTTTGATGAACATCACCACTTaGTCATGCGTGTGTTCTGAGATGTCCCGGCCATTG +
Preference number: 6 (lower is better)
Translates to: WDSRLALMNITT*SCVCSEMSRPL
Trigger: CAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp AATTCCAGAAAGTCGGAGGAGTCATCGGGCACACCGTaGTCAGGCCATGCGACGTACTGGAGATGTGTCACT +
Preference number: 6 (lower is better)
Translates to: NSRKSEESSGTP*SGHATYWRCVT
Trigger: AGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CAA 90 bp CTTCGCCAGTTGGGAGTAATGGGAGGGGAACGAGAAGGCAGACTCTaGGTTTCTAAGTGCTCCACTGATAAGGATCTCCGCATGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LRQLGVMGGEREGRL*VSKCSTDKDLRMAG
Trigger: CCCAGCCATGCGGAGATCCTTATCAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCGTTCCCCTCCCATTACTCCCAACTGGCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS CAA 90 bp AGAGCTGCTGATCAACGCCGTCAGGTGAGCAGGAGCCTGGAGCATTaGAAGATGGAGACACAGAACTGGATGACTTCTGGGTCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: RAADQRRQVSRSLEH*KMETQNWMTSGSGS
Trigger: GCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp CATTTCTCGGGACACATAGGCGATGGTGCAGTCCTCTaGCTGACACTGGATGTGAAAGCCGCCGTGGTTCAT +
Preference number: 6 (lower is better)
Translates to: HFSGHIGDGAVL*LTLDVKAAVVH
Trigger: ATGAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 72 bp GGAGGGGAACGAGAAGGCAGACTCTTGGTTTCTAAGTaGTCCACTGATAAGGATCTCCGCATGGCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: GGEREGRLLVSK*STDKDLRMAGF
Trigger: GAACCCAGCCATGCGGAGATCCTTATCAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCGTTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS GCA 72 bp TTATCTGCAGAAGAGTGGCGTGGCTTTCGGATTTCGTaGCGGAGCCGAGGACTTCGCTTTTTGGTGTTCCGA +
Preference number: 6 (lower is better)
Translates to: LSAEEWRGFRIS*RSRGLRFLVFR
Trigger: TCGGAACACCAAAAAGCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446349.5
CDS CCA 72 bp TGTCACCATTATCATTCTTGTCACAGTAGTACTGGCTaGCGTCCTCGGTGGAGCCCCCTTTGGTCACCCTGT +
Preference number: 6 (lower is better)
Translates to: CHHYHSCHSSTG*RPRWSPLWSPC
Trigger: ACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATGATAATGGTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp CTGATGGCTCATGTTGATGCCCTACGTCTTGACTGGTaGGGGCAATTTTCTGCCAGCACAGGCTGTCCTATG +
Preference number: 6 (lower is better)
Translates to: LMAHVDALRLDW*GQFSASTGCPM
Trigger: CATAGGACAGCCTGTGCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAACATGAGCCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp GATCAACGCCGTCAGGTGAGCAGGAGCCTGGAGCATTaGAAGATGGAGACACAGAACTGGATGACTTCTGGG +
Preference number: 6 (lower is better)
Translates to: DQRRQVSRSLEH*KMETQNWMTSG
Trigger: CCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CAA 90 bp AACACTGTGCCAGGATCCATCCACCCAAGCTCCATCTGCATGAAGTaGCTAAAAGGAGGGGAGTCTGTGAAGACACCTTCTTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: NTVPGSIHPSSICMK*LKGGESVKTPSWLG
Trigger: CCCCAGCCAAGAAGGTGTCTTCACAGACTCCCCTCCTTTTAGCAACTTCATGCAGATGGAGCTTGGGTGGATGGATCCTGGCACAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp CATTTCATTTGCAAGGTTATCTGCAGAAGAGTGGCGTaGCTTTCGGATTTCGTGCCGGAGCCGAGGACTTCG +
Preference number: 6 (lower is better)
Translates to: HFICKVICRRVA*LSDFVPEPRTS
Trigger: CGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp TTACTGATGGCTCATGTTGATGCCCTACGTCTTGACTaGTGGGGGCAATTTTCTGCCAGCACAGGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LLMAHVDALRLD*WGQFSASTGCP
Trigger: AGGACAGCCTGTGCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAACATGAGCCATCAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 90 bp CTCTTGGTGCGGGCTTCGGTTCTGAGAAACTTCAGAATCGCTGTCTaGAGGGGCCAGAGAGCCCTTGTACGTGTAAAATACATCTTCCGT +
Preference number: 6 (lower is better)
Translates to: LLVRASVLRNFRIAV*RGQRALVRVKYIFR
Trigger: ACGGAAGATGTATTTTACACGTACAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCACCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp GCTACCTTACGCTCTGCAAAGCTGCCCTGTCATTACTaGTGGCTCATGTTGATGCCCTACGTCTTGACTGGT +
Preference number: 6 (lower is better)
Translates to: ATLRSAKLPCHY*WLMLMPYVLTG
Trigger: ACCAGTCAAGACGTAGGGCATCAACATGAGCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS GCA 72 bp TCCCGGCTGGCTTTGATGAACATCACCACTTGGTCATaGGTGTGTTCTGAGATGTCCCGGCCATTGATTAAC +
Preference number: 6 (lower is better)
Translates to: SRLALMNITTWS*VCSEMSRPLIN
Trigger: GTTAATCAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 72 bp AACACTGTGCCAGGATCCATCCACCCAAGCTCCATCTaGATGAAGTTGCTAAAAGGAGGGGAGTCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: NTVPGSIHPSSI*MKLLKGGESVK
Trigger: CTTCACAGACTCCCCTCCTTTTAGCAACTTCATGCAGATGGAGCTTGGGTGGATGGATCCTGGCACAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp TGGTTTCTAAGTGCTCCACTGATAAGGATCTCCGCATaGCTGGGTTCCACACCATCCCGCCAATCACCTTTT +
Preference number: 6 (lower is better)
Translates to: WFLSAPLIRISA*LGSTPSRQSPF
Trigger: AAAAGGTGATTGGCGGGATGGTGTGGAACCCAGCCATGCGGAGATCCTTATCAGTGGAGCACTTAGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS CCA 72 bp AGGAGCCTGGAGCATTTGAAGATGGAGACACAGAACTaGATGACTTCTGGGTCAGGTAGCTTTGTGCCGGAT +
Preference number: 6 (lower is better)
Translates to: RSLEHLKMETQN*MTSGSGSFVPD
Trigger: ATCCGGCACAAAGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp TTGGGAGTAATGGGAGGGGAACGAGAAGGCAGACTCTaGGTTTCTAAGTGCTCCACTGATAAGGATCTCCGC +
Preference number: 6 (lower is better)
Translates to: LGVMGGEREGRL*VSKCSTDKDLR
Trigger: GCGGAGATCCTTATCAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCGTTCCCCTCCCATTACTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS CAA 72 bp CGGGCTTCGGTTCTGAGAAACTTCAGAATCGCTGTCTaGAGGGGCCAGAGAGCCCTTGTACGTGTAAAATAC +
Preference number: 6 (lower is better)
Translates to: RASVLRNFRIAV*RGQRALVRVKY
Trigger: GTATTTTACACGTACAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp GCTTCGGGGAAAAGCTGGTTCAGTTCATCTTCAGACTaGAAGTCAGCAAATGAGCGGACAGCTCTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: ASGKSWFSSSSD*KSANERTALLL
Trigger: CAGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp GAATGCAGGTGTCCGCAGGTGACTCTGGGTTTATCCTaGATACCACAAGAGGCATCTTTTGATCCACTCCTC +
Preference number: 6 (lower is better)
Translates to: ECRCPQVTLGLS*IPQEASFDPLL
Trigger: GAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGTCACCTGCGGACACCTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp TTCCAGGACCTCCAAGCTGAATTCTGCACTCATCTCTaGGCAACCAGCAAATGTAACTTCCAAACTCCAGAC +
Preference number: 6 (lower is better)
Translates to: FQDLQAEFCTHL*ATSKCNFQTPD
Trigger: GTCTGGAGTTTGGAAGTTACATTTGCTGGTTGCCCAGAGATGAGTGCAGAATTCAGCTTGGAGGTCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS GCA 72 bp CCAAAATATTCCTTTTCAGTCACACCCAGGTGGTTGTaGACCATATCCAGAAGAACCTGGCCAGTGTCTTGT +
Preference number: 6 (lower is better)
Translates to: PKYSFSVTPRWL*TISRRTWPVSC
Trigger: ACAAGACACTGGCCAGGTTCTTCTGGATATGGTGCACAACCACCTGGGTGTGACTGAAAAGGAATATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS CAA 72 bp CACAAAGAAACTAGAATAGTGGAACCCAACCCGAGCTaGGGAGACTTCCTAGGAATCTTGAAGGAGCCTAGT +
Preference number: 6 (lower is better)
Translates to: HKETRIVEPNPS*GDFLGILKEPS
Trigger: ACTAGGCTCCTTCAAGATTCCTAGGAAGTCTCCCAAGCTCGGGTTGGGTTCCACTATTCTAGTTTCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp GTTCTACTCCATAGAAGTCGAGGGTCCGCGCTATGTTaGTATAGCAGGATTCTGCTTCTGATTGTTTTAGCC +
Preference number: 6 (lower is better)
Translates to: VLLHRSRGSALC*YSRILLLIVLA
Trigger: GGCTAAAACAATCAGAAGCAGAATCCTGCTATATCAACATAGCGCGGACCCTCGACTTCTATGGAGTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 72 bp TACATCTTCCGTTTCCGTGATGTAGGTCATTTCATTTaGAAGGTTATCTGCAGAAGAGTGGCGTGGCTTTCG +
Preference number: 6 (lower is better)
Translates to: YIFRFRDVGHFI*KVICRRVAWLS
Trigger: CGAAAGCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp ATTAATGGTAGAAGCCTGGTCCAAGATAAGATGATCTaGCAGCTAGTCGTGGTGGTATGTGCCTATAATCCC +
Preference number: 6 (lower is better)
Translates to: INGRSLVQDKMI*QLVVVVCAYNP
Trigger: GGGATTATAGGCACATACCACCACGACTAGCTGCCAGATCATCTTATCTTGGACCAGGCTTCTACCATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp GTTCCACACCATCCCGCCAATCACCTTTTTGCAATATaGGTTATTTACCGACTTTTTGGTGTTCCGAGAGCC +
Preference number: 6 (lower is better)
Translates to: VPHHPANHLFAI*VIYRLFGVPRA
Trigger: GGCTCTCGGAACACCAAAAAGTCGGTAAATAACCAATATTGCAAAAAGGTGATTGGCGGGATGGTGTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS CAA 90 bp GGCATCATACACAAAGAAACTAGAATAGTGGAACCCAACCCGAGCTaGGGAGACTTCCTAGGAATCTTGAAGGAGCCTAGTTTTGAGATT +
Preference number: 6 (lower is better)
Translates to: GIIHKETRIVEPNPS*GDFLGILKEPSFEI
Trigger: AATCTCAAAACTAGGCTCCTTCAAGATTCCTAGGAAGTCTCCCAAGCTCGGGTTGGGTTCCACTATTCTAGTTTCTTTGTGTATGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp TCTGTACCACGCCATCTAAAAAGTGGATGCTGCAAATaGCTTCTGATCGAGTTTTCTCTTTGGGTAACTCCG +
Preference number: 6 (lower is better)
Translates to: SVPRHLKSGCCK*LLIEFSLWVTP
Trigger: CGGAGTTACCCAAAGAGAAAACTCGATCAGAAGTCATTTGCAGCATCCACTTTTTAGATGGCGTGGTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS CCA 72 bp ACAACCTCCTATTTGCACAGTTCCGGGCTTTGTACATaGTACTACTTTGTAACTTTCCCTCTTATCTCAGCC +
Preference number: 6 (lower is better)
Translates to: TTSYLHSSGLCT*YYFVTFPLISA
Trigger: GGCTGAGATAAGAGGGAAAGTTACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp ATGGCTGGGTTCCACACCATCCCGCCAATCACCTTTTaGCAATATTGGTTATTTACCGACTTTTTGGTGTTC +
Preference number: 6 (lower is better)
Translates to: MAGFHTIPPITF*QYWLFTDFLVF
Trigger: GAACACCAAAAAGTCGGTAAATAACCAATATTGCAAAAAGGTGATTGGCGGGATGGTGTGGAACCCAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
CDS CAA 72 bp GAGATCACCACTCACCAAATGCTGCCTTGTCATATATaGAGCAAAGTTTCTGAGTCAACCCCATGGCATCAT +
Preference number: 6 (lower is better)
Translates to: EITTHQMLPCHI*SKVSESTPWHH
Trigger: ATGATGCCATGGGGTTGACTCAGAAACTTTGCTCAATATATGACAAGGCAGCATTTGGTGAGTGGTGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp GAAAGGTTTGCTGAATTGAAATCGTTGCTAGTAATTTaGGGACCTTCCATAGTGCCCCTTTCCAGGCACAGT +
Preference number: 6 (lower is better)
Translates to: ERFAELKSLLVI*GPSIVPLSRHS
Trigger: ACTGTGCCTGGAAAGGGGCACTATGGAAGGTCCCAAAATTACTAGCAACGATTTCAATTCAGCAAACCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497739.1
CDS CAA 72 bp GTGTCCTTCCCAGAAAGGTTTGCTGAATTGAAATCGTaGCTAGTAATTTTGGGACCTTCCATAGTGCCCCTT +
Preference number: 6 (lower is better)
Translates to: VSFPERFAELKS*LVILGPSIVPL
Trigger: AAGGGGCACTATGGAAGGTCCCAAAATTACTAGCAACGATTTCAATTCAGCAAACCTTTCTGGGAAGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497739.1
CDS TCA 72 bp TCCACAAGTTTTTGCAAGATCGGTAATTCAGCATGTTaGAGGCCACAATATGTTCCCTGGATTCAGCCTGTT +
Preference number: 6 (lower is better)
Translates to: STSFCKIGNSAC*RPQYVPWIQPV
Trigger: AACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAAAACTTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS GCA 72 bp ATACATAAAAATACGGTTTTGGTCCAAGGTATCAGGTaGTACCTTACGCTCTGCAAAGCTGCCCTGTCATTA +
Preference number: 6 (lower is better)
Translates to: IHKNTVLVQGIR*YLTLCKAALSL
Trigger: TAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGACCAAAACCGTATTTTTATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp GAGACAGAACATTCTTTTCCTGAGGTAGTAGCTTCTTaGCCTGAAAGAACGTATGGTGCTCAACACAGGATT +
Preference number: 6 (lower is better)
Translates to: ETEHSFPEVVAS*PERTYGAQHRI
Trigger: AATCCTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CAA 90 bp ATAAACGTGGAGATCACCACTCACCAAATGCTGCCTTGTCATATATaGAGCAAAGTTTCTGAGTCAACCCCATGGCATCATACACAAAGA +
Preference number: 6 (lower is better)
Translates to: INVEITTHQMLPCHI*SKVSESTPWHHTQR
Trigger: TCTTTGTGTATGATGCCATGGGGTTGACTCAGAAACTTTGCTCAATATATGACAAGGCAGCATTTGGTGAGTGGTGATCTCCACGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 90 bp TGCTTCAAACAGTATTACAACCTCCTATTTGCACAGTTCCGGGCTTaGTACATGGTACTACTTTGTAACTTTCCCTCTTATCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: CFKQYYNLLFAQFRA*YMVLLCNFPSYLSL
Trigger: GAGGCTGAGATAAGAGGGAAAGTTACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAATACTGTTTGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp CTACTCAACCTAAGTGTCCTTCCCAGAAAGGTTTGCTaGATTGAAATCGTTGCTAGTAATTTTGGGACCTTC +
Preference number: 6 (lower is better)
Translates to: LLNLSVLPRKVC*IEIVASNFGTF
Trigger: GAAGGTCCCAAAATTACTAGCAACGATTTCAATTCAGCAAACCTTTCTGGGAAGGACACTTAGGTTGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497739.1
CDS GCA 72 bp ATGGGAATGCTTCAAACAGTATTACAACCTCCTATTTaGACAGTTCCGGGCTTTGTACATGGTACTACTTTG +
Preference number: 6 (lower is better)
Translates to: MGMLQTVLQPPI*TVPGFVHGTTL
Trigger: CAAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAATACTGTTTGAAGCATTCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 72 bp GATGGGAATGCTTCAAACAGTATTACAACCTCCTATTaGCACAGTTCCGGGCTTTGTACATGGTACTACTTT +
Preference number: 6 (lower is better)
Translates to: DGNASNSITTSY*HSSGLCTWYYF
Trigger: AAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAATACTGTTTGAAGCATTCCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CAA 90 bp TCTAAAAAGTGGATGCTGCAAATGACTTCTGATCGAGTTTTCTCTTaGGGTAACTCCGAGGTGCGTATATTATTAATTCTTCCACCCAAC +
Preference number: 6 (lower is better)
Translates to: SKKWMLQMTSDRVFS*GNSEVRILLILPPN
Trigger: GTTGGGTGGAAGAATTAATAATATACGCACCTCGGAGTTACCCAAAGAGAAAACTCGATCAGAAGTCATTTGCAGCATCCACTTTTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS TCA 72 bp CCAAATGCTGCCTTGTCATATATTGAGCAAAGTTTCTaGGTCAACCCCATGGCATCATACACAAAGAAACTA +
Preference number: 6 (lower is better)
Translates to: PNAALSYIEQSF*VNPMASYTKKL
Trigger: TAGTTTCTTTGTGTATGATGCCATGGGGTTGACTCAGAAACTTTGCTCAATATATGACAAGGCAGCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp CACCTGGCCTTGAGAGACAGTATAACATACATTTGCTaGTTCACACCTATTTGGTATTGGAATCTCCATCTT +
Preference number: 6 (lower is better)
Translates to: HLALRDSITYIC*FTPIWYWNLHL
Trigger: AAGATGGAGATTCCAATACCAAATAGGTGTGAATCAGCAAATGTATGTTATACTGTCTCTCAAGGCCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp GTAACTTTAAAGGTCTGTACCACGCCATCTAAAAAGTaGATGCTGCAAATGACTTCTGATCGAGTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: VTLKVCTTPSKK*MLQMTSDRVFS
Trigger: AGAGAAAACTCGATCAGAAGTCATTTGCAGCATCCACTTTTTAGATGGCGTGGTACAGACCTTTAAAGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262539.7
ENST00000374541.4
CDS CAA 72 bp CAGTATTACAACCTCCTATTTGCACAGTTCCGGGCTTaGTACATGGTACTACTTTGTAACTTTCCCTCTTAT +
Preference number: 6 (lower is better)
Translates to: QYYNLLFAQFRA*YMVLLCNFPSY
Trigger: ATAAGAGGGAAAGTTACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAATACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS TCA 72 bp TTCAAACGGGATAGACATTCCATTGTCTGGCCAAGATaGCAAAAGGGAAACCTCTTGAAATCTAATATAGAC +
Preference number: 6 (lower is better)
Translates to: FKRDRHSIVWPR*QKGNLLKSNID
Trigger: GTCTATATTAGATTTCAAGAGGTTTCCCTTTTGTCATCTTGGCCAGACAATGGAATGTCTATCCCGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5
CDS CCA 72 bp TTGATCGGGTATAAAGTGACTATCGGAAAGATAGCCTaGATGATGTATGGAAGAATTATAGTCTCCAAAATG +
Preference number: 6 (lower is better)
Translates to: LIGYKVTIGKIA*MMYGRIIVSKM
Trigger: CATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTATCTTTCCGATAGTCACTTTATACCCGATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262539.7
ENST00000374541.4
ENST00000412145.5
ENST00000446349.5
CDS CAA 90 bp GTTTCATTATTCCTTCAAATTTATAAAGGCCAAGGAACTGGCTTTTaGAGATGGGAATGCTTCAAACAGTATTACAACCTCCTATTTGCA +
Preference number: 6 (lower is better)
Translates to: VSLFLQIYKGQGTGF*RWECFKQYYNLLFA
Trigger: TGCAAATAGGAGGTTGTAATACTGTTTGAAGCATTCCCATCTCAAAAAGCCAGTTCCTTGGCCTTTATAAATTTGAAGGAATAATGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412145.5
ENST00000446349.5