RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPN23 (Homo sapiens)

Ensembl gene IDs: ENSG00000076201

Ensembl transcript IDs: ENST00000265562.5, ENST00000456221.5, ENST00000462998.1, ENST00000477276.2, ENST00000495653.1, ENST00000602307.5, ENST00000683323.1, ENST00000683566.1, ENST00000683708.1

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCCGGTGTGGGCAGGGCAGCCCGGACCTGGTCAAGCGGCCCGCTaGGCAGGCGCAGGTTGCCGACGTGCAGGTTCATGGCACGGTGCA +
Preference number: 1 (lower is better)
Translates to: GPVWAGQPGPGQAAR*AGAGCRRAGSWHGA
Trigger: TGCACCGTGCCATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGACCAGGTCCGGGCTGCCCTGCCCACACCGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GTCCCGCTCAATCAGCCGCAGGGCCTGCGGCCGACGACCCTCAGCTaGATCCACCTTGGTGGGCTGCAGCAGGGGCTGCCCACCCCCAGG +
Preference number: 1 (lower is better)
Translates to: VPLNQPQGLRPTTLS*IHLGGLQQGLPTPR
Trigger: CCTGGGGGTGGGCAGCCCCTGCTGCAGCCCACCAAGGTGGATGCAGCTGAGGGTCGTCGGCCGCAGGCCCTGCGGCTGATTGAGCGGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp TTGTCCTCTGGGGAGAGGGCCGGTGTGGGCAGGGCAGCCCGGACCTaGTCAAGCGGCCCGCTGAGCAGGCGCAGGTTGCCGACGTGCAGG +
Preference number: 1 (lower is better)
Translates to: LSSGERAGVGRAART*SSGPLSRRRLPTCR
Trigger: CCTGCACGTCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGACCAGGTCCGGGCTGCCCTGCCCACACCGGCCCTCTCCCCAGAGGACAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CTGAGTGCCGCCATGCTGGCTCTCCGGGCTGGAGGAGAGCAGGTCTaGAGCTGCGGCGCCTCGGCGCAGGCAAGGGGGTGGTTCTGCTGC +
Preference number: 1 (lower is better)
Translates to: LSAAMLALRAGGEQV*SCGASAQARGWFCC
Trigger: GCAGCAGAACCACCCCCTTGCCTGCGCCGAGGCGCCGCAGCTGCAGACCTGCTCTCCTCCAGCCCGGAGAGCCAGCATGGCGGCACTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CCTTGGTGGGCTGCAGCAGGGGCTGCCCACCCCCAGGAGACTGAGTaGCGCCATGCTGGCTCTCCGGGCTGGAGGAGAGCAGGTCTGCAG +
Preference number: 1 (lower is better)
Translates to: PWWAAAGAAHPQETE*RHAGSPGWRRAGLQ
Trigger: CTGCAGACCTGCTCTCCTCCAGCCCGGAGAGCCAGCATGGCGGCACTCAGTCTCCTGGGGGTGGGCAGCCCCTGCTGCAGCCCACCAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 90 bp TCCACCTTGGTGGGCTGCAGCAGGGGCTGCCCACCCCCAGGAGACTaGGTGCCGCCATGCTGGCTCTCCGGGCTGGAGGAGAGCAGGTCT +
Preference number: 1 (lower is better)
Translates to: STLVGCSRGCPPPGD*VPPCWLSGLEESRS
Trigger: AGACCTGCTCTCCTCCAGCCCGGAGAGCCAGCATGGCGGCACTCAGTCTCCTGGGGGTGGGCAGCCCCTGCTGCAGCCCACCAAGGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGACGCTaGTCAATGCCAGGCTCAGGGCACCGTGCACCATGGGCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: AGSARAPHGFRCCGR*SMPGSGHRAPWAGP
Trigger: GGGGCCAGCCCATGGTGCACGGTGCCCTGAGCCTGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGACGCTGCTCAATaGCAGGCTCAGGGCACCGTGCACCATGGGCTGGCCCCTCTCGGT +
Preference number: 1 (lower is better)
Translates to: QHALHMGFGAADAAQ*QAQGTVHHGLAPLG
Trigger: ACCGAGAGGGGCCAGCCCATGGTGCACGGTGCCCTGAGCCTGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CGGACCTGGTCAAGCGGCCCGCTGAGCAGGCGCAGGTTGCCGACGTaGAGGTTCATGGCACGGTGCAGCTCACTGTTGGTGAAGGAGGCC +
Preference number: 1 (lower is better)
Translates to: RTWSSGPLSRRRLPT*RFMARCSSLLVKEA
Trigger: GGCCTCCTTCACCAACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGACCAGGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCTGTCAGTaGACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTA +
Preference number: 1 (lower is better)
Translates to: EYPPHGCVLHVGLCQ*TEDTVLGGQVLLQV
Trigger: TACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CCCAGAAGAGAAGTGGTGCTGTGCCGGGATGGGTTGCTTAGCCCCTaGAGGGTAGGTGTAAGGCGTGGGCAGTGGCTGCGGTGGGGGCAC +
Preference number: 1 (lower is better)
Translates to: PRREVVLCRDGLLSP*RVGVRRGQWLRWGH
Trigger: GTGCCCCCACCGCAGCCACTGCCCACGCCTTACACCTACCCTGCAGGGGCTAAGCAACCCATCCCGGCACAGCACCACTTCTCTTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTaGTGCGGACGCTGCTCAATGCCAGGCTCAGGGCACCGTGCACCA +
Preference number: 1 (lower is better)
Translates to: GLGTAGSARAPHGFR*CGRCSMPGSGHRAP
Trigger: TGGTGCACGGTGCCCTGAGCCTGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GGGCCTGGCAGGTGGACTGCGTGCGCTCCAGCAGAGCAGCCACCTTaGTCTCCAGATCTGCGTAGAAGTCCCTGCCCTCCTGCGACTTCT +
Preference number: 1 (lower is better)
Translates to: GPGRWTACAPAEQPP*SPDLRRSPCPPATS
Trigger: AGAAGTCGCAGGAGGGCAGGGACTTCTACGCAGATCTGGAGAGCAAGGTGGCTGCTCTGCTGGAGCGCACGCAGTCCACCTGCCAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp TCGTCAGAGGGCCGGGTGGCCCGCAGCCCTTGCCCGTTATGGGCCTaGAGAAAGTTATGCTTGCTCATCCGCTGTTTGCCCCGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: SSEGRVARSPCPLWA*RKLCLLIRCLPRRE
Trigger: CTCCCTGCGGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCTGCGGGCCACCCGGCCCTCTGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp GTCGGGCCGGACGCTGAGAGCCGCGCACTTCTCCATGAGCTGGGGTaGGATGTGGCTGTAGGCATCAAGGTTGTCCACCGTCTCGGGATC +
Preference number: 1 (lower is better)
Translates to: VGPDAESRALLHELG*DVAVGIKVVHRLGI
Trigger: GATCCCGAGACGGTGGACAACCTTGATGCCTACAGCCACATCCCACCCCAGCTCATGGAGAAGTGCGCGGCTCTCAGCGTCCGGCCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp GGGCTGTGTGGCTGGGGATGGGCGCCTGGATGCTATCTACTGTGGTaGTGGCTGGCCGAACCGCCATGGCCAACTCGGGGCCTGAGAATT +
Preference number: 1 (lower is better)
Translates to: GLCGWGWAPGCYLLW*WLAEPPWPTRGLRI
Trigger: AATTCTCAGGCCCCGAGTTGGCCATGGCGGTTCGGCCAGCCACCACCACAGTAGATAGCATCCAGGCGCCCATCCCCAGCCACACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTaGACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCG +
Preference number: 1 (lower is better)
Translates to: HFWSKSLSTRRTAAY*TLASVSAQRTRSWA
Trigger: CGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GGGCTGTCGGGCAGGCCTAACTCAGGCCAAGTGGGGAAGTGCAGGTaGACAAGAGAGCGCTTGAGGCTCTGGTCTCGGAACTGCAGGCTC +
Preference number: 1 (lower is better)
Translates to: GLSGRPNSGQVGKCR*TRERLRLWSRNCRL
Trigger: GAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCACCTGCACTTCCCCACTTGGCCTGAGTTAGGCCTGCCCGACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp AGAAGGCTGAGGGGGTCGTCAGAGGGCCGGGTGGCCCGCAGCCCTTaGCCGTTATGGGCCTGCAGAAAGTTATGCTTGCTCATCCGCTGT +
Preference number: 1 (lower is better)
Translates to: RRLRGSSEGRVARSP*PLWACRKLCLLIRC
Trigger: ACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCTGCGGGCCACCCGGCCCTCTGACGACCCCCTCAGCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp CTGTGTGGCTGGGGATGGGCGCCTGGATGCTATCTACTGTGGTGGTaGCTGGCCGAACCGCCATGGCCAACTCGGGGCCTGAGAATTGAG +
Preference number: 1 (lower is better)
Translates to: LCGWGWAPGCYLLWW*LAEPPWPTRGLRIE
Trigger: CTCAATTCTCAGGCCCCGAGTTGGCCATGGCGGTTCGGCCAGCCACCACCACAGTAGATAGCATCCAGGCGCCCATCCCCAGCCACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp TTGAGGCTCTGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATaGGTTTCGGTGCTGCGGACGCTGCTCAATGCCAGGCTCAGGGCA +
Preference number: 1 (lower is better)
Translates to: LRLWSRNCRLSTRST*VSVLRTLLNARLRA
Trigger: TGCCCTGAGCCTGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCAGAGCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 90 bp ACTTGGCCCATTCTCGCCTCACCTCTGCCAGCTCAGCCTTGGAGGTaGTGGAGATGGCCCCTGCCTGGCCCACCGCCTCCTGAAACTTCT +
Preference number: 1 (lower is better)
Translates to: TWPILASPLPAQPWR*WRWPLPGPPPPETS
Trigger: AGAAGTTTCAGGAGGCGGTGGGCCAGGCAGGGGCCATCTCCATCACCTCCAAGGCTGAGCTGGCAGAGGTGAGGCGAGAATGGGCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 90 bp TGTGCAGCGGCCGCTGATGCAGGTAATGTGCGTGCACCTCCTGGATaGAGCGCAGCAAGTTGCTGGGGCTGTCGGGCAGGCCTAACTCAG +
Preference number: 1 (lower is better)
Translates to: CAAAADAGNVRAPPG*SAASCWGCRAGLTQ
Trigger: CTGAGTTAGGCCTGCCCGACAGCCCCAGCAACTTGCTGCGCTTCATCCAGGAGGTGCACGCACATTACCTGCATCAGCGGCCGCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp TCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTaGACCTTAGCCAGGATGCGCTTTAGGTTTTGCAGCACGGCCTTG +
Preference number: 1 (lower is better)
Translates to: SRSCCSRDTRWSRIS*TLARMRFRFCSTAL
Trigger: CAAGGCCGTGCTGCAAAACCTAAAGCGCATCCTGGCTAAGGTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GCAATGGCGATGGAACGGCCTCGGGCATCATGTTCCTGCGCATCTTaGAGCTCTCGCCAGACAGTGTCCAGAGCTCCCACATCCCCCAGC +
Preference number: 1 (lower is better)
Translates to: AMAMERPRASCSCAS*SSRQTVSRAPTSPS
Trigger: GCTGGGGGATGTGGGAGCTCTGGACACTGTCTGGCGAGAGCTGCAAGATGCGCAGGAACATGATGCCCGAGGCCGTTCCATCGCCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp AAGTGCAGGTGCACAAGAGAGCGCTTGAGGCTCTGGTCTCGGAACTaGAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGACG +
Preference number: 1 (lower is better)
Translates to: KCRCTRERLRLWSRN*RLSTRSTWVSVLRT
Trigger: CGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCACCTGCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp TGGCCCGCAGCCCTTGCCCGTTATGGGCCTGCAGAAAGTTATGCTTaGTCATCCGCTGTTTGCCCCGCAGGGAGCTGTCCAGGGAGAAGG +
Preference number: 1 (lower is better)
Translates to: WPAALARYGPAESYA*SSAVCPAGSCPGRR
Trigger: CCTTCTCCCTGGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCTGCGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp ATGCCAGGCTCAGGGCACCGTGCACCATGGGCTGGCCCCTCTCGGTaGGGAAGTAGCGTGCCACTTTTTGCTTCTCCATCTCAGCCTCAG +
Preference number: 1 (lower is better)
Translates to: MPGSGHRAPWAGPSR*GSSVPLFASPSQPQ
Trigger: CTGAGGCTGAGATGGAGAAGCAAAAAGTGGCACGCTACTTCCCCACCGAGAGGGGCCAGCCCATGGTGCACGGTGCCCTGAGCCTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp GGCCAAGTGGGGAAGTGCAGGTGCACAAGAGAGCGCTTGAGGCTCTaGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCG +
Preference number: 1 (lower is better)
Translates to: GQVGKCRCTRERLRL*SRNCRLSTRSTWVS
Trigger: CGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCACCTGCACTTCCCCACTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CCGCTGAGCAGGCGCAGGTTGCCGACGTGCAGGTTCATGGCACGGTaGAGCTCACTGTTGGTGAAGGAGGCCTTCTCATGGACTTCCATG +
Preference number: 1 (lower is better)
Translates to: PLSRRRLPTCRFMAR*SSLLVKEAFSWTSM
Trigger: CATGGAAGTCCATGAGAAGGCCTCCTTCACCAACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTaGGTACTGCACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTC +
Preference number: 1 (lower is better)
Translates to: GVPLLVQVAEYPPHG*VLHVGLCQCTEDTV
Trigger: GACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GATTCCGTTCCCAGCCTCCACCTCCTGCACAGCTGCATAGAGCAGTaGAAAGGCTCCCGTGCGGCCCACACCAGAGCTGCAGTGCACAAT +
Preference number: 1 (lower is better)
Translates to: DSVPSLHLLHSCIEQ*KGSRAAHTRAAVHN
Trigger: ATTGTGCACTGCAGCTCTGGTGTGGGCCGCACGGGAGCCTTTGCACTGCTCTATGCAGCTGTGCAGGAGGTGGAGGCTGGGAACGGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GCCCGTTATGGGCCTGCAGAAAGTTATGCTTGCTCATCCGCTGTTTaGCCCGCAGGGAGCTGTCCAGGGAGAAGGCCTCTGGGGTCAAGG +
Preference number: 1 (lower is better)
Translates to: ARYGPAESYACSSAV*PAGSCPGRRPLGSR
Trigger: CCTTGACCCCAGAGGCCTTCTCCCTGGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp GCGTACTGCACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTaGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATAC +
Preference number: 1 (lower is better)
Translates to: AYCTLASVSAQRTRS*AARFCSRYTFSWSY
Trigger: GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTaGATCCAGAAGGCTGAGGGGGTCGTCAGAGGGCCGGGTGGCCCG +
Preference number: 1 (lower is better)
Translates to: DQVGKTCSGLVECPE*IQKAEGVVRGPGGP
Trigger: CGGGCCACCCGGCCCTCTGACGACCCCCTCAGCCTTCTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 90 bp GCCTTGGAGGTGATGGAGATGGCCCCTGCCTGGCCCACCGCCTCCTaGAACTTCTGCTCTAGCAGCTCATCCTCCTCCAACAGATCTCTG +
Preference number: 1 (lower is better)
Translates to: ALEVMEMAPAWPTAS*NFCSSSSSSSNRSL
Trigger: CAGAGATCTGTTGGAGGAGGATGAGCTGCTAGAGCAGAAGTTTCAGGAGGCGGTGGGCCAGGCAGGGGCCATCTCCATCACCTCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 90 bp CTAACTCAGGCCAAGTGGGGAAGTGCAGGTGCACAAGAGAGCGCTTaGGGCTCTGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACAT +
Preference number: 1 (lower is better)
Translates to: LTQAKWGSAGAQESA*GSGLGTAGSARAPH
Trigger: ATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCACCTGCACTTCCCCACTTGGCCTGAGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CTTCTCATGGACTTCCATGTACTTGGCCCATTCTCGCCTCACCTCTaGCAGCTCAGCCTTGGAGGTGATGGAGATGGCCCCTGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: LLMDFHVLGPFSPHL*QLSLGGDGDGPCLA
Trigger: GGCCAGGCAGGGGCCATCTCCATCACCTCCAAGGCTGAGCTGGCAGAGGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCCATGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp CATCCTGGTGCCGGTTCTTCAGTGAGTAGCAGCGGGCAATGGCGATaGAACGGCCTCGGGCATCATGTTCCTGCGCATCTTGCAGCTCTC +
Preference number: 1 (lower is better)
Translates to: HPGAGSSVSSSGQWR*NGLGHHVPAHLAAL
Trigger: GAGAGCTGCAAGATGCGCAGGAACATGATGCCCGAGGCCGTTCCATCGCCATTGCCCGCTGCTACTCACTGAAGAACCGGCACCAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp ACCAGCGAGGCAGTGATGTCATCTTTCTGGATAAGCTCACGCAGCTaGTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACCTTA +
Preference number: 1 (lower is better)
Translates to: TSEAVMSSFWISSRS*CSRDTRWSRISCTL
Trigger: TAAGGTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTTATCCAGAAAGATGACATCACTGCCTCGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp GCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTaGTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCC +
Preference number: 1 (lower is better)
Translates to: ASVSAQRTRSWAARF*SRYTFSWSYFFSCS
Trigger: GGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp AGCCATGGGTACCAGTTTGGCAAAGATGTCAGGGCCTGTAACAGCTaGGTCTGTGGGGTTCACTGGCAAGGGCTTCACCAAGGGGGCTCC +
Preference number: 1 (lower is better)
Translates to: SHGYQFGKDVRACNS*VCGVHWQGLHQGGS
Trigger: GGAGCCCCCTTGGTGAAGCCCTTGCCAGTGAACCCCACAGACCCAGCTGTTACAGGCCCTGACATCTTTGCCAAACTGGTACCCATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp AAGGTGGTTCTTCTGGCTGATGCTTGCACTGGCCAAGGGTTTGCATaGAGGAGGCACACCATGGCGCTGCAGGACCTGCTCCACGTGTCT +
Preference number: 1 (lower is better)
Translates to: KVVLLADACTGQGFA*RRHTMALQDLLHVS
Trigger: AGACACGTGGAGCAGGTCCTGCAGCGCCATGGTGTGCCTCCTCCATGCAAACCCTTGGCCAGTGCAAGCATCAGCCAGAAGAACCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 90 bp ACGGTTACTGTCATAGGGCATGACATCCTGGTGCCGGTTCTTCAGTaGGTAGCAGCGGGCAATGGCGATGGAACGGCCTCGGGCATCATG +
Preference number: 1 (lower is better)
Translates to: TVTVIGHDILVPVLQ*VAAGNGDGTASGIM
Trigger: CATGATGCCCGAGGCCGTTCCATCGCCATTGCCCGCTGCTACTCACTGAAGAACCGGCACCAGGATGTCATGCCCTATGACAGTAACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 90 bp CATCCTTGCCTGAGCGCAGCACCACACGGTTACTGTCATAGGGCATaGCATCCTGGTGCCGGTTCTTCAGTGAGTAGCAGCGGGCAATGG +
Preference number: 1 (lower is better)
Translates to: HPCLSAAPHGYCHRA*HPGAGSSVSSSGQW
Trigger: CCATTGCCCGCTGCTACTCACTGAAGAACCGGCACCAGGATGTCATGCCCTATGACAGTAACCGTGTGGTGCTGCGCTCAGGCAAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp TCTTTCTGGATAAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTaGTCCCGCATCTCCTGCACCTTAGCCAGGATGCGCTTTAGGTTT +
Preference number: 1 (lower is better)
Translates to: SFWISSRSCCSRDTR*SRISCTLARMRFRF
Trigger: AAACCTAAAGCGCATCCTGGCTAAGGTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTTATCCAGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 90 bp GGTTGCCGACGTGCAGGTTCATGGCACGGTGCAGCTCACTGTTGGTaGAGGAGGCCTTCTCATGGACTTCCATGTACTTGGCCCATTCTC +
Preference number: 1 (lower is better)
Translates to: GCRRAGSWHGAAHCW*RRPSHGLPCTWPIL
Trigger: GAGAATGGGCCAAGTACATGGAAGTCCATGAGAAGGCCTCCTTCACCAACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCGGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp CCAGCAGAGCAGCCACCTTGCTCTCCAGATCTGCGTAGAAGTCCCTaGCCTCCTGCGACTTCTTCATCAGGTCCTCATAGGCTTCATACG +
Preference number: 1 (lower is better)
Translates to: PAEQPPCSPDLRRSP*PPATSSSGPHRLHT
Trigger: CGTATGAAGCCTATGAGGACCTGATGAAGAAGTCGCAGGAGGGCAGGGACTTCTACGCAGATCTGGAGAGCAAGGTGGCTGCTCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 90 bp TTCATGGCACGGTGCAGCTCACTGTTGGTGAAGGAGGCCTTCTCATaGACTTCCATGTACTTGGCCCATTCTCGCCTCACCTCTGCCAGC +
Preference number: 1 (lower is better)
Translates to: FMARCSSLLVKEAFS*TSMYLAHSRLTSAS
Trigger: GCTGGCAGAGGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCCATGAGAAGGCCTCCTTCACCAACAGTGAGCTGCACCGTGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 90 bp TCCATCTCAGCCTCAGAAACCAGCATGACAATGACTGACACTTTCTaGTCATGGACCATGAGCCAGAAGTCAGCAGCTGTGCCAGGCAGT +
Preference number: 1 (lower is better)
Translates to: SISASETSMTMTDTF*SWTMSQKSAAVPGS
Trigger: ACTGCCTGGCACAGCTGCTGACTTCTGGCTCATGGTCCATGAGCAGAAAGTGTCAGTCATTGTCATGCTGGTTTCTGAGGCTGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp AGGGCAGCCCGGACCTGGTCAAGCGGCCCGCTGAGCAGGCGCAGGTaGCCGACGTGCAGGTTCATGGCACGGTGCAGCTCACTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: RAARTWSSGPLSRRR*PTCRFMARCSSLLV
Trigger: CACCAACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGACCAGGTCCGGGCTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGAGGGCAGCCCGGACCTaGTCAAGCGGCCCGCTGAGC +
Preference number: 2 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLRAART*SSGPLS
Trigger: GCTCAGCGGGCCGCTTGACCAGGTCCGGGCTGCCCT...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp TGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTaGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: WSKSLSTRRTAAYCT*ASVSAQRTRSWAAR
Trigger: CCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCGATGGAGATGGCCCCTaGCTGGCCCACCGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLDGDGP*LAHRLL
Trigger: CAGGAGGCGGTGGGCCAGGCAGGGGCCATCTCCATC...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAGGGAGAGGGCCGGTGTaGGCAGGGCAGCCCGGACCT +
Preference number: 2 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVGRGPV*AGQPGP
Trigger: AGGTCCGGGCTGCCCTGCCCACACCGGCCCTCTCCC...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTGTCGGGCCGGACGCTaGGAGCCGCGCACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYCRAGR*EPRTSP
Trigger: TGGAGAAGTGCGCGGCTCTCAGCGTCCGGCCCGACA...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGGTGTCAGGCAGTCGTaGGCCAGCCACCATGTCAGG +
Preference number: 2 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRGVRQS*ASHHVR
Trigger: CCTGACATGGTGGCTGGCCCACGACTGCCTGACACC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGAGTAGCAGCGGGCAATaGCGATGGAACGGCCTCGGG +
Preference number: 2 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRSSSGQ*RWNGLG
Trigger: CCCGAGGCCGTTCCATCGCCATTGCCCGCTGCTACT...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp ACCTGCGGGGATCCCAGAAGAGAAGTGGTGCTGTGCCGGGATGGGTaGCTTAGCCCCTGCAGGGTAGGTGTAAGGCGTGGGCAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: TCGDPRREVVLCRDG*LSPCRVGVRRGQWL
Trigger: CAGCCACTGCCCACGCCTTACACCTACCCTGCAGGGGCTAAGCAACCCATCCCGGCACAGCACCACTTCTCTTCTGGGATCCCCGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGAATGGTAAGAGGGGCTaGCTGGGGGCCCATGGGTCT +
Preference number: 2 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRNGKRG*LGAHGS
Trigger: AGACCCATGGGCCCCCAGGCAGCCCCTCTTACCATT...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCATGGGGCTGTGGGCCGTaGCGGCGGCTTCTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: PAATAAASQDAHRGPAQSWGCGP*RRLLLQ
Trigger: CTGAAGAAGAAGCCGCCGCCACGGCCCACAGCCCCA...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp GGCAATGGCGATGGAACGGCCTCGGGCATCATGTTCCTGCGCATCTaGCAGCTCTCGCCAGACAGTGTCCAGAGCTCCCACATCCCCCAG +
Preference number: 2 (lower is better)
Translates to: GNGDGTASGIMFLRI*QLSPDSVQSSHIPQ
Trigger: CTGGGGGATGTGGGAGCTCTGGACACTGTCTGGCGAGAGCTGCAAGATGCGCAGGAACATGATGCCCGAGGCCGTTCCATCGCCATTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp GTGGCCCGCAGCCCTTGCCCGTTATGGGCCTGCAGAAAGTTATGCTaGCTCATCCGCTGTTTGCCCCGCAGGGAGCTGTCCAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: VARSPCPLWACRKLC*LIRCLPRRELSREK
Trigger: CTTCTCCCTGGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCTGCGGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCAGCTCAGCCTTGGAGGTaGTGGAGATGGCCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: PAATAAASQDAHRGPAQSAQPWR*WRWPLP
Trigger: AGGCAGGGGCCATCTCCATCACCTCCAAGGCTGAGC...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCACGCAGGTTGCCGACGTaGAGGTTCATGGCACGGTGC +
Preference number: 2 (lower is better)
Translates to: PAATAAASQDAHRGPAQSRRLPT*RFMARC
Trigger: GCACCGTGCCATGAACCTGCACGTCGGCAACCTGCG...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGTTGTCCAGGGCGCTCTaGAAGTATGCAACCCGCTCC +
Preference number: 2 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRLSRAL*KYATRS
Trigger: GGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAA...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCACAGCTGCATCCACCTTaGTGGGCTGCAGCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: PAATAAASQDAHRGPAQSQLHPP*WAAAGA
Trigger: AGCCCCTGCTGCAGCCCACCAAGGTGGATGCAGCTG...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp CCTAACTCAGGCCAAGTGGGGAAGTGCAGGTGCACAAGAGAGCGCTaGAGGCTCTGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACA +
Preference number: 2 (lower is better)
Translates to: PNSGQVGKCRCTRER*RLWSRNCRLSTRST
Trigger: TGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCACCTGCACTTCCCCACTTGGCCTGAGTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACATCCGTGAACACACCTaGCAGCACTTGCATGGACTG +
Preference number: 2 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHIREHT*QHLHGL
Trigger: CAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGAT...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACAAGCCTCCACATCCGTaGACACACCTGACAGCACTT +
Preference number: 2 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHKPPHP*THLTAL
Trigger: AAGTGCTGTCAGGTGTGTTCACGGATGTGGAGGCTT...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCATGGGCGGCCAGGTTCTaGTCCAGGTACACCTTCAGC +
Preference number: 2 (lower is better)
Translates to: PAATAAASQDAHRGPAQSWAARF*SRYTFS
Trigger: GCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCA...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGCTGCGTAGAAGTCCCTaGCCTCCTGCGACTTCTTCA +
Preference number: 2 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRLRRSP*PPATSS
Trigger: TGAAGAAGTCGCAGGAGGGCAGGGACTTCTACGCAG...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGCTTGCTCTCCAGATCTaGGTAGAAGTCCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRLALQI*VEVPAL
Trigger: GAGGGCAGGGACTTCTACGCAGATCTGGAGAGCAAG...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGCACTGGCCAAGGGTTTaGATGGAGGAGGCACACCAT +
Preference number: 2 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRHWPRV*MEEAHH
Trigger: ATGGTGTGCCTCCTCCATGCAAACCCTTGGCCAGTG...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTACACCCGCTTGTCCATaGCCCCCAGCATGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQATPACP*PPAWSA
Trigger: TGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGTTCTTCCAGTCCTTCTaGATCCGGCCCAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLFFQSF*IRPSSE
Trigger: CTCACTGCTGGGCCGGATCCAGAAGGACTGGAAGAA...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAGAGACTGTGCCCACTaGGAAGCTCTGCTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLRDCAH*EALLGV
Trigger: CACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
3UTR-3UTR TCA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGCCTCCAACAGATCTCTaGTGTCCTTCAGGGAAGCCT +
Preference number: 2 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLPPTDL*CPSGKP
Trigger: AGGCTTCCCTGAAGGACATCAGAGATCTGTTGGAGG...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACAAGCTCTGCTGGGTGTaGGCAGGTGGGCATGAGATG +
Preference number: 2 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYKLCWV*AGGHEM
Trigger: CATCTCATGCCCACCTGCCCACACCCAGCAGAGCTT...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAAGGGCCTGTAACAGCTaGGTCTGTGGGGTTCACTGG +
Preference number: 2 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVRACNS*VCGVHW
Trigger: CCAGTGAACCCCACAGACCCAGCTGTTACAGGCCCT...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACGACGTGCAGGTTCATaGCACGGTGCAGCTCACTGT +
Preference number: 2 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVRRAGS*HGAAHC
Trigger: ACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCG...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACCAGCCTCATGGTAAATaGAGTCGTTGTCCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHQPHGK*SRCPSW
Trigger: CCAAGAAGGACAACGACTTCATTTACCATGAGGCTG...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCTCCTCACTGTACAGTaGCGAGGCCTCGTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFLLTVQ*RGLVGS
Trigger: GCTGCCCACGAGGCCTCGTCACTGTACAGTGAGGAG...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGGGATCCAACTGCATTaGATCCATGAACTGGTCCAG +
Preference number: 2 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRGIQLH*IHELVQ
Trigger: CTGGACCAGTTCATGGATTCAATGCAGTTGGATCCC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGCTGAAGAGTGTCCAATaGTGGGACAGCCTCATGGTA +
Preference number: 2 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRLKSVQ*WDSLMV
Trigger: TACCATGAGGCTGTCCCAGCATTGGACACTCTTCAG...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGGTGGGGAAGTAGCGTaGCACTTTTTGCTTCTCCAT +
Preference number: 2 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRGGEVA*HFLLLH
Trigger: ATGGAGAAGCAAAAAGTGGCACGCTACTTCCCCACC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTATGCACAGTGTCAGGCTaGCCCTTGGCCAACTTGATG +
Preference number: 2 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVCTVSG*PLANLM
Trigger: CATCAAGTTGGCCAAGGGCCAGCCTGACACTGTGCA...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCACCTCGTGGGCAGCCATaGGTACCAGTTTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: PAATAAASQDAHRGPAQSPRGQP*VPVWQR
Trigger: TCTTTGCCAAACTGGTACCCATGGCTGCCCACGAGG...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp ACAGTGTCAGGCTGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTaGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTC +
Preference number: 2 (lower is better)
Translates to: TVSGWPLANLMASLS*SRALWKYATRSPNF
Trigger: GAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCAGCCTGACACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp TCACTGTACAGTGACGAGGCCTCGTGGGCAGCCATGGGTACCAGTTaGGCAAAGATGTCAGGGCCTGTAACAGCTGGGTCTGTGGGGTTC +
Preference number: 2 (lower is better)
Translates to: SLYSDEASWAAMGTS*AKMSGPVTAGSVGF
Trigger: GAACCCCACAGACCCAGCTGTTACAGGCCCTGACATCTTTGCCAAACTGGTACCCATGGCTGCCCACGAGGCCTCGTCACTGTACAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTCCAAGGCCCGGCATaGCTCCTTGTAGTAATCTAC +
Preference number: 2 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVLQGPA*LLVVIY
Trigger: GTAGATTACTACAAGGAGGCATGCCGGGCCTTGGAG...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCGCTCCCCGAACTTCTaGTGCTCCTCGGCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFRSPNF*CSSACF
Trigger: AAAGCAGGCCGAGGAGCAGCAGAAGTTCGGGGAGCG...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCGTCTCGGGATCCAACTaGATTGAATCCATGAACTGG +
Preference number: 2 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLVSGSN*IESMNW
Trigger: CCAGTTCATGGATTCAATGCAGTTGGATCCCGAGAC...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGACACCTGACAGCACTTaGATGGACTGTACAAGGTTC +
Preference number: 2 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRTPDST*MDCTRF
Trigger: GAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGT...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAGGACTTCCATGTACTTaGCCCATTCTCGCCTCACCT +
Preference number: 2 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVGLPCT*PILASP
Trigger: AGGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCC...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGGGCGAAGGCGCCGGCTaGGCACTGGAAATGGGTACA +
Preference number: 2 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVGEGAG*ALEMGT
Trigger: TGTACCCATTTCCAGTGCGCAGCCGGCGCCTTCGCC...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR GCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGTTCTCTGCTGCCGCATaGGCCGCACCAGCTGAGGCA +
Preference number: 2 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQFSAAA*AAPAEA
Trigger: TGCCTCAGCTGGTGCGGCGCATGCGGCAGCAGAGAA...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGAGTCGTTGTCCTTCTTaGCAGAATTGTACTTTCCCC +
Preference number: 2 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRSRCPS*QNCTFP
Trigger: GGGGAAAGTACAATTCTGCCAAGAAGGACAACGACT...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACAAGGAGGCCTTCTCATaGACTTCCATGTACTTGGCC +
Preference number: 2 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYKEAFS*TSMYLA
Trigger: GGCCAAGTACATGGAAGTCCATGAGAAGGCCTCCTT...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGGTGCCGGTTCTTCAGTaGGTAGCAGCGGGCAATGGC +
Preference number: 2 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQVPVLQ*VAAGNG
Trigger: GCCATTGCCCGCTGCTACTCACTGAAGAACCGGCAC...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACACCATGGCCCCCAGCATaGAGTGCAGCGCTCCAAGGT +
Preference number: 2 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTPWPPA*SAALQG
Trigger: ACCTTGGAGCGCTGCACTCCATGCTGGGGGCCATGG...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGGCAGCTCACTGTTGGTaGAGGAGGCCTTCTCATGGA +
Preference number: 2 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQAAHCW*RRPSHG
Trigger: TCCATGAGAAGGCCTCCTTCACCAACAGTGAGCTGC...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGCTGCGTACTGCACGTTaGCCTCTGTCAGTGCACAGA +
Preference number: 2 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQLRTAR*PLSVHR
Trigger: TCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAG...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGATCCCAGAAGAGAAGTaGTGCTGTGCCGGGATGGGT +
Preference number: 2 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQIPEEK*CCAGMG
Trigger: ACCCATCCCGGCACAGCACCACTTCTCTTCTGGGAT...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACATTGAGCGTAAGGATCTaGCGGCTCATGTCGACGCTG +
Preference number: 2 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTLSVRI*RLMSTL
Trigger: CAGCGTCGACATGAGCCGCCAGATCCTTACGCTCAA...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 90 bp ATTGAATCCATGAACTGGTCCAGGACCTCATTCTTGTCCTCAATCTaGGCCATCATCTCCCGGAGCAGCTTGGCCTTCTCCTCACTGTAC +
Preference number: 2 (lower is better)
Translates to: IESMNWSRTSFLSSI*AIISRSSLAFSSLY
Trigger: GTACAGTGAGGAGAAGGCCAAGCTGCTCCGGGAGATGATGGCCAAGATTGAGGACAAGAATGAGGTCCTGGACCAGTTCATGGATTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR TCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTTCAATAGCAAAGAGCTaGAAAATGTCGGGTCCCATA +
Preference number: 2 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFSIAKS*KMSGPI
Trigger: TATGGGACCCGACATTTTTCAGCTCTTTGCTATTGA...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTGCTGCGCACTGGAAATaGGTACAGGAGACCTTCATG +
Preference number: 2 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFAAHWK*VQETFM
Trigger: CATGAAGGTCTCCTGTACCCATTTCCAGTGCGCAGC...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGAGGTACACCTTCAGCTaGTCATACTTTTTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQRYTFS*SYFFSC
Trigger: GCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCT...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GCCATGCTGGCTCTCCGGGCTGGAGGAGAGCAGGTCTaGAGCTGCGGCGCCTCGGCGCAGGCAAGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: AMLALRAGGEQV*SCGASAQARGW
Trigger: CCACCCCCTTGCCTGCGCCGAGGCGCCGCAGCTGCAGACCTGCTCTCCTCCAGCCCGGAGAGCCAGCATGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp GTGGGCTGCAGCAGGGGCTGCCCACCCCCAGGAGACTaGGTGCCGCCATGCTGGCTCTCCGGGCTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: VGCSRGCPPPGD*VPPCWLSGLEE
Trigger: CTCCTCCAGCCCGGAGAGCCAGCATGGCGGCACTCAGTCTCCTGGGGGTGGGCAGCCCCTGCTGCAGCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp TGGGCAGGGCAGCCCGGACCTGGTCAAGCGGCCCGCTaGGCAGGCGCAGGTTGCCGACGTGCAGGTTCATGG +
Preference number: 3 (lower is better)
Translates to: WAGQPGPGQAAR*AGAGCRRAGSW
Trigger: CCATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGACCAGGTCCGGGCTGCCCTGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp CCTGCGGGGCAGCAGCGGCTTTGGGGCTGTGGGCCGTaGCGGCGGCTTCTTCTTCAGCTCCCTGTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: PAGQQRLWGCGP*RRLLLQLPVQE
Trigger: CTCCTGGACAGGGAGCTGAAGAAGAAGCCGCCGCCACGGCCCACAGCCCCAAAGCCGCTGCTGCCCCGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp CCTGCGGCCGACGACCCTCAGCTGCATCCACCTTGGTaGGCTGCAGCAGGGGCTGCCCACCCCCAGGAGACT +
Preference number: 3 (lower is better)
Translates to: PAADDPQLHPPW*AAAGAAHPQET
Trigger: AGTCTCCTGGGGGTGGGCAGCCCCTGCTGCAGCCCACCAAGGTGGATGCAGCTGAGGGTCGTCGGCCGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GGCTGGGTAGAGGGCAGGCCCAGGTGCTACGGGCATTaGATGGGGCCCTGGGGCCCTGGGCTGTATCAGCTG +
Preference number: 3 (lower is better)
Translates to: GWVEGRPRCYGH*MGPWGPGLYQL
Trigger: CAGCTGATACAGCCCAGGGCCCCAGGGCCCCATGCAATGCCCGTAGCACCTGGGCCTGCCCTCTACCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp GGCTGGGGATGGGCGCCTGGATGCTATCTACTGTGGTaGTGGCTGGCCGAACCGCCATGGCCAACTCGGGGC +
Preference number: 3 (lower is better)
Translates to: GWGWAPGCYLLW*WLAEPPWPTRG
Trigger: GCCCCGAGTTGGCCATGGCGGTTCGGCCAGCCACCACCACAGTAGATAGCATCCAGGCGCCCATCCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp CCGCACGGCTGCGTACTGCACGTTGGCCTCTGTCAGTaGACAGAGGACACGGTCCTGGGCGGCCAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: PHGCVLHVGLCQ*TEDTVLGGQVL
Trigger: CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp CTCCACATGGGTTTCGGTGCTGCGGACGCTGCTCAATaGCAGGCTCAGGGCACCGTGCACCATGGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: LHMGFGAADAAQ*QAQGTVHHGLA
Trigger: GGCCAGCCCATGGTGCACGGTGCCCTGAGCCTGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTaGGGACGCTGCTCAATGCCAGGCTCAGGGCACCGT +
Preference number: 3 (lower is better)
Translates to: AGSARAPHGFRC*GRCSMPGSGHR
Trigger: ACGGTGCCCTGAGCCTGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp TGGGGATGGGCGCCTGGATGCTATCTACTGTGGTGGTaGCTGGCCGAACCGCCATGGCCAACTCGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: WGWAPGCYLLWW*LAEPPWPTRGL
Trigger: CAGGCCCCGAGTTGGCCATGGCGGTTCGGCCAGCCACCACCACAGTAGATAGCATCCAGGCGCCCATCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp TCAAGCGGCCCGCTGAGCAGGCGCAGGTTGCCGACGTaGAGGTTCATGGCACGGTGCAGCTCACTGTTGGTG +
Preference number: 3 (lower is better)
Translates to: SSGPLSRRRLPT*RFMARCSSLLV
Trigger: CACCAACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GAAGTGGTGCTGTGCCGGGATGGGTTGCTTAGCCCCTaGAGGGTAGGTGTAAGGCGTGGGCAGTGGCTGCGG +
Preference number: 3 (lower is better)
Translates to: EVVLCRDGLLSP*RVGVRRGQWLR
Trigger: CCGCAGCCACTGCCCACGCCTTACACCTACCCTGCAGGGGCTAAGCAACCCATCCCGGCACAGCACCACTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp ACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTaGTGCGGACGCTGCTCAATGCCAGGCTCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: TAGSARAPHGFR*CGRCSMPGSGH
Trigger: GTGCCCTGAGCCTGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp AGGGGGTCGTCAGAGGGCCGGGTGGCCCGCAGCCCTTaGCCGTTATGGGCCTGCAGAAAGTTATGCTTGCTC +
Preference number: 3 (lower is better)
Translates to: RGSSEGRVARSP*PLWACRKLCLL
Trigger: GAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCTGCGGGCCACCCGGCCCTCTGACGACCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp TGTGGCTGGGGATGGGCGCCTGGATGCTATCTACTGTaGTGGTGGCTGGCCGAACCGCCATGGCCAACTCGG +
Preference number: 3 (lower is better)
Translates to: CGWGWAPGCYLL*WWLAEPPWPTR
Trigger: CCGAGTTGGCCATGGCGGTTCGGCCAGCCACCACCACAGTAGATAGCATCCAGGCGCCCATCCCCAGCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp TTTGGCCGTGGGGCTGTGTGGCTGGGGATGGGCGCCTaGATGCTATCTACTGTGGTGGTGGCTGGCCGAACC +
Preference number: 3 (lower is better)
Translates to: FGRGAVWLGMGA*MLSTVVVAGRT
Trigger: GGTTCGGCCAGCCACCACCACAGTAGATAGCATCCAGGCGCCCATCCCCAGCCACACAGCCCCACGGCCAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGTCCTCAGACACCCGCTaGTCCATGGCCCCCAGCATG +
Preference number: 3 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLSSDTR*SMAPSM
Trigger: CATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGA...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp GCCGCTGATGCAGGTAATGTGCGTGCACCTCCTGGATaGAGCGCAGCAAGTTGCTGGGGCTGTCGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: AADAGNVRAPPG*SAASCWGCRAG
Trigger: GCCTGCCCGACAGCCCCAGCAACTTGCTGCGCTTCATCCAGGAGGTGCACGCACATTACCTGCATCAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp TCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTaGACGTTGGCCTCTGTCAGTGCACAGAGGACACGG +
Preference number: 3 (lower is better)
Translates to: SKSLSTRRTAAY*TLASVSAQRTR
Trigger: CCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GGCCGGGTGGCCCGCAGCCCTTGCCCGTTATGGGCCTaGAGAAAGTTATGCTTGCTCATCCGCTGTTTGCCC +
Preference number: 3 (lower is better)
Translates to: GRVARSPCPLWA*RKLCLLIRCLP
Trigger: GGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCTGCGGGCCACCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp ATAAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTaGTCCCGCATCTCCTGCACCTTAGCCAGGATGCGC +
Preference number: 3 (lower is better)
Translates to: ISSRSCCSRDTR*SRISCTLARMR
Trigger: GCGCATCCTGGCTAAGGTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATaGGTTTCGGTGCTGCGGACGCTGCTCAATGCCAGG +
Preference number: 3 (lower is better)
Translates to: WSRNCRLSTRST*VSVLRTLLNAR
Trigger: CCTGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp CCAGGAGGCCGAATGCTGAGCTTGGCAATGGTGGCCTaGATGGAGCTGATGGGCACATCCCCACCGAGGACC +
Preference number: 3 (lower is better)
Translates to: PGGRMLSLAMVA*MELMGTSPPRT
Trigger: GGTCCTCGGTGGGGATGTGCCCATCAGCTCCATCCAGGCCACCATTGCCAAGCTCAGCATTCGGCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACGCCATGGGTACCAGTTaGGCAAAGATGTCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHAMGTS*AKMSGP
Trigger: AGGCCCTGACATCTTTGCCAAACTGGTACCCATGGC...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp GCCAAGTGGGGAAGTGCAGGTGCACAAGAGAGCGCTTaGGGCTCTGGTCTCGGAACTGCAGGCTCAGCACGC +
Preference number: 3 (lower is better)
Translates to: AKWGSAGAQESA*GSGLGTAGSAR
Trigger: GCGTGCTGAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCACCTGCACTTCCCCACTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp AGGTGGACTGCGTGCGCTCCAGCAGAGCAGCCACCTTaGTCTCCAGATCTGCGTAGAAGTCCCTGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: RWTACAPAEQPP*SPDLRRSPCPP
Trigger: AGGAGGGCAGGGACTTCTACGCAGATCTGGAGAGCAAGGTGGCTGCTCTGCTGGAGCGCACGCAGTCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp ACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTaGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGC +
Preference number: 3 (lower is better)
Translates to: TLASVSAQRTRS*AARFCSRYTFS
Trigger: GCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp CCTGGTGCCGGTTCTTCAGTGAGTAGCAGCGGGCAATaGCGATGGAACGGCCTCGGGCATCATGTTCCTGCG +
Preference number: 3 (lower is better)
Translates to: PGAGSSVSSSGQ*RWNGLGHHVPA
Trigger: CGCAGGAACATGATGCCCGAGGCCGTTCCATCGCCATTGCCCGCTGCTACTCACTGAAGAACCGGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGAGCATGAGGTTGACGTaGAGCGTAAGGATCTGGCGG +
Preference number: 3 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRSMRLT*SVRIWR
Trigger: CCGCCAGATCCTTACGCTCAACGTCAACCTCATGCT...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp AAGTTTCTTCCAGTCCTTCTGGATCCGGCCCAGCAGTaGGGCAGTGTCGGGGTTCTCCAAGGCCCGGCATGC +
Preference number: 3 (lower is better)
Translates to: KFLPVLLDPAQQ*GSVGVLQGPAC
Trigger: GCATGCCGGGCCTTGGAGAACCCCGACACTGCCTCACTGCTGGGCCGGATCCAGAAGGACTGGAAGAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp TCTGCAGCGTGGAGTTCCACTTTTGGTCCAAGTCGCTaGGTACCCGCCGCACGGCTGCGTACTGCACGTTGG +
Preference number: 3 (lower is better)
Translates to: SAAWSSTFGPSR*VPAARLRTARW
Trigger: CCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACGCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp AGGCGCAGGTTGCCGACGTGCAGGTTCATGGCACGGTaGAGCTCACTGTTGGTGAAGGAGGCCTTCTCATGG +
Preference number: 3 (lower is better)
Translates to: RRRLPTCRFMAR*SSLLVKEAFSW
Trigger: CCATGAGAAGGCCTCCTTCACCAACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCGGCAACCTGCGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp TGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTaGACCTTAGCCAGGATGCGCTTTAGGTTTTGCAGC +
Preference number: 3 (lower is better)
Translates to: CCSRDTRWSRIS*TLARMRFRFCS
Trigger: GCTGCAAAACCTAAAGCGCATCCTGGCTAAGGTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp CTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTaGGTACTGCACGTTGGCCTCTGTCAGTGCACAGAG +
Preference number: 3 (lower is better)
Translates to: LLVQVAEYPPHG*VLHVGLCQCTE
Trigger: CTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp CGCAGCCCTTGCCCGTTATGGGCCTGCAGAAAGTTATaGTTGCTCATCCGCTGTTTGCCCCGCAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: RSPCPLWACRKL*LLIRCLPRREL
Trigger: CAGCTCCCTGCGGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp AGACCTTCATGCCCTCCTCAGACACCCGCTTGTCCATaGCCCCCAGCATGGAGTGCAGCGCTCCAAGGTTGT +
Preference number: 3 (lower is better)
Translates to: RPSCPPQTPACP*PPAWSAALQGC
Trigger: ACAACCTTGGAGCGCTGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGAGGGCATGAAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp GACGCTGAGAGCCGCGCACTTCTCCATGAGCTGGGGTaGGATGTGGCTGTAGGCATCAAGGTTGTCCACCGT +
Preference number: 3 (lower is better)
Translates to: DAESRALLHELG*DVAVGIKVVHR
Trigger: ACGGTGGACAACCTTGATGCCTACAGCCACATCCCACCCCAGCTCATGGAGAAGTGCGCGGCTCTCAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp TCAGGGCACCGTGCACCATGGGCTGGCCCCTCTCGGTaGGGAAGTAGCGTGCCACTTTTTGCTTCTCCATCT +
Preference number: 3 (lower is better)
Translates to: SGHRAPWAGPSR*GSSVPLFASPS
Trigger: AGATGGAGAAGCAAAAAGTGGCACGCTACTTCCCCACCGAGAGGGGCCAGCCCATGGTGCACGGTGCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp CTTCTGGCTGATGCTTGCACTGGCCAAGGGTTTGCATaGAGGAGGCACACCATGGCGCTGCAGGACCTGCTC +
Preference number: 3 (lower is better)
Translates to: LLADACTGQGFA*RRHTMALQDLL
Trigger: GAGCAGGTCCTGCAGCGCCATGGTGTGCCTCCTCCATGCAAACCCTTGGCCAGTGCAAGCATCAGCCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp GTCATAGGGCATGACATCCTGGTGCCGGTTCTTCAGTaGGTAGCAGCGGGCAATGGCGATGGAACGGCCTCG +
Preference number: 3 (lower is better)
Translates to: VIGHDILVPVLQ*VAAGNGDGTAS
Trigger: CGAGGCCGTTCCATCGCCATTGCCCGCTGCTACTCACTGAAGAACCGGCACCAGGATGTCATGCCCTATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GACTTCCATGTACTTGGCCCATTCTCGCCTCACCTCTaGCAGCTCAGCCTTGGAGGTGATGGAGATGGCCCC +
Preference number: 3 (lower is better)
Translates to: DFHVLGPFSPHL*QLSLGGDGDGP
Trigger: GGGGCCATCTCCATCACCTCCAAGGCTGAGCTGGCAGAGGTGAGGCGAGAATGGGCCAAGTACATGGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp ATCTCCTGCACCTTAGCCAGGATGCGCTTTAGGTTTTaGAGCACGGCCTTGTCCTCTGGGGAGAGGGCCGGT +
Preference number: 3 (lower is better)
Translates to: ISCTLARMRFRF*STALSSGERAG
Trigger: ACCGGCCCTCTCCCCAGAGGACAAGGCCGTGCTGCAAAACCTAAAGCGCATCCTGGCTAAGGTGCAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GCAGTGATGTCATCTTTCTGGATAAGCTCACGCAGCTaGTGCTCCAGGGACACGCGCTGGTCCCGCATCTCC +
Preference number: 3 (lower is better)
Translates to: AVMSSFWISSRS*CSRDTRWSRIS
Trigger: GGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTTATCCAGAAAGATGACATCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GCAATGGCGATGGAACGGCCTCGGGCATCATGTTCCTaGGCATCTTGCAGCTCTCGCCAGACAGTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: AMAMERPRASCS*ASCSSRQTVSR
Trigger: TCTGGACACTGTCTGGCGAGAGCTGCAAGATGCGCAGGAACATGATGCCCGAGGCCGTTCCATCGCCATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp GCCCTTGCCCGTTATGGGCCTGCAGAAAGTTATGCTTaGTCATCCGCTGTTTGCCCCGCAGGGAGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: ALARYGPAESYA*SSAVCPAGSCP
Trigger: TGGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp GCCGGTTCTTCAGTGAGTAGCAGCGGGCAATGGCGATaGAACGGCCTCGGGCATCATGTTCCTGCGCATCTT +
Preference number: 3 (lower is better)
Translates to: AGSSVSSSGQWR*NGLGHHVPAHL
Trigger: AAGATGCGCAGGAACATGATGCCCGAGGCCGTTCCATCGCCATTGCCCGCTGCTACTCACTGAAGAACCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTGGCCCAGCATGAGGTaGACGTTGAGCGTAAGGATC +
Preference number: 3 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYWPSMR*TLSVRI
Trigger: GATCCTTACGCTCAACGTCAACCTCATGCTGGGCCA...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACAGAAAGCTCTTCCTGTaGTCCAACATCGACTTCTCC +
Preference number: 3 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHRKLFL*SNIDFS
Trigger: GGAGAAGTCGATGTTGGACAACAGGAAGAGCTTTCT...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGTCCAGGACCTCATTCTaGTCCTCAATCTTGGCCATC +
Preference number: 3 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLSRTSF*SSILAI
Trigger: GATGGCCAAGATTGAGGACAAGAATGAGGTCCTGGA...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTGGACTTCCATGTACTaGGCCCATTCTCGCCTCACC +
Preference number: 3 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYWTSMY*AHSRLT
Trigger: GGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCCA...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp GGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTaGATCCAGAAGGCTGAGGGGGTCGTCAGAGGGCCG +
Preference number: 3 (lower is better)
Translates to: GKTCSGLVECPE*IQKAEGVVRGP
Trigger: CGGCCCTCTGACGACCCCCTCAGCCTTCTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp CTGAGCGCAGCACCACACGGTTACTGTCATAGGGCATaGCATCCTGGTGCCGGTTCTTCAGTGAGTAGCAGC +
Preference number: 3 (lower is better)
Translates to: LSAAPHGYCHRA*HPGAGSSVSSS
Trigger: GCTGCTACTCACTGAAGAACCGGCACCAGGATGTCATGCCCTATGACAGTAACCGTGTGGTGCTGCGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp CCCCCAATGACATCCATAGTGAAGCGAAGCGCGTCTTaGACAGTGTCAGGCTGGCCCTTGGCCAACTTGATG +
Preference number: 3 (lower is better)
Translates to: PPMTSIVKRSAS*TVSGWPLANLM
Trigger: CATCAAGTTGGCCAAGGGCCAGCCTGACACTGTGCAAGACGCGCTTCGCTTCACTATGGATGTCATTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp AGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTaGTCCAGGTACACCTTCAGCTGGTCATACTTTTTC +
Preference number: 3 (lower is better)
Translates to: SAQRTRSWAARF*SRYTFSWSYFF
Trigger: GAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR GCA 72 bp CAGCCACCTTGCTCTCCAGATCTGCGTAGAAGTCCCTaGCCTCCTGCGACTTCTTCATCAGGTCCTCATAGG +
Preference number: 3 (lower is better)
Translates to: QPPCSPDLRRSP*PPATSSSGPHR
Trigger: CCTATGAGGACCTGATGAAGAAGTCGCAGGAGGGCAGGGACTTCTACGCAGATCTGGAGAGCAAGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp TCTGTGGTGACCAGCGAGGCAGTGATGTCATCTTTCTaGATAAGCTCACGCAGCTGCTGCTCCAGGGACACG +
Preference number: 3 (lower is better)
Translates to: SVVTSEAVMSSF*ISSRSCCSRDT
Trigger: CGTGTCCCTGGAGCAGCAGCTGCGTGAGCTTATCCAGAAAGATGACATCACTGCCTCGCTGGTCACCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACAGAAGCGAAGCGCGTCTaGCACAGTGTCAGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTEAKRV*HSVRLA
Trigger: GGCCAGCCTGACACTGTGCAAGACGCGCTTCGCTTC...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp CGTGCAGGTTCATGGCACGGTGCAGCTCACTGTTGGTaGAGGAGGCCTTCTCATGGACTTCCATGTACTTGG +
Preference number: 3 (lower is better)
Translates to: RAGSWHGAAHCW*RRPSHGLPCTW
Trigger: CCAAGTACATGGAAGTCCATGAGAAGGCCTCCTTCACCAACAGTGAGCTGCACCGTGCCATGAACCTGCACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp AACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTaGAAGTATGCAACCCGCTCCCCGAACTTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: NLMASLSLSRAL*KYATRSPNFCC
Trigger: GCAGCAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CCA 72 bp TTGGCCTTCTCCTCACTGTACAGTGACGAGGCCTCGTaGGCAGCCATGGGTACCAGTTTGGCAAAGATGTCA +
Preference number: 3 (lower is better)
Translates to: LAFSSLYSDEAS*AAMGTSLAKMS
Trigger: TGACATCTTTGCCAAACTGGTACCCATGGCTGCCCACGAGGCCTCGTCACTGTACAGTGAGGAGAAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTTGGCCCTTGGCCAACTaGATGGCTTCATTGAGCTTG +
Preference number: 3 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFWPLAN*MASLSL
Trigger: CAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGTTCTTGTCCTCAATCTaGGCCATCATCTCCCGGAGC +
Preference number: 3 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQFLSSI*AIISRS
Trigger: GCTCCGGGAGATGATGGCCAAGATTGAGGACAAGAA...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR TCA 72 bp ATCAAGGTTGTCCACCGTCTCGGGATCCAACTGCATTaGATCCATGAACTGGTCCAGGACCTCATTCTTGTC +
Preference number: 3 (lower is better)
Translates to: IKVVHRLGIQLH*IHELVQDLILV
Trigger: GACAAGAATGAGGTCCTGGACCAGTTCATGGATTCAATGCAGTTGGATCCCGAGACGGTGGACAACCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR-3UTR CAA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGTCCTTCTTGGCAGAATaGTACTTTCCCCCAATGACA +
Preference number: 3 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQSFLAE*YFPPMT
Trigger: TGTCATTGGGGGAAAGTACAATTCTGCCAAGAAGGA...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCGGCCGTGGGGCTGTGTaGCTGGGGATGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLGRGAV*LGMGAW
Trigger: CCAGGCGCCCATCCCCAGCCACACAGCCCCACGGCC...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACGGGCACCGTGCACCATaGGCTGGCCCCTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHGHRAP*AGPSRW
Trigger: CCACCGAGAGGGGCCAGCCCATGGTGCACGGTGCCC...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGGAGCAGGTCTGCAGCTaGGGCGCCTCGGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLREQVCS*GASAQA
Trigger: TGCCTGCGCCGAGGCGCCGCAGCTGCAGACCTGCTC...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGGGAGGAGAGCAGGTCTaGAGCTGCGGCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLGGEQV*SCGASA
Trigger: CGCCGAGGCGCCGCAGCTGCAGACCTGCTCTCCTCC...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCAGGGCAGCCCGGACCTaGTCAAGCGGCCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLRAART*SSGPLS
Trigger: GCTCAGCGGGCCGCTTGACCAGGTCCGGGCTGCCCT...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGGGTGGTTCTGCTGCTaGGGGGCGAGGGGGTACCGG +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRGWFCC*GARGYR
Trigger: CCGGTACCCCCTCGCCCCCCAGCAGCAGAACCACCC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp CGGACCTGGTCAAGCGGCCCGCTGAGCAGGCGCAGGTaGCCGACGTGCAGGTTCATGGCACGGTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RTWSSGPLSRRR*PTCRFMARCSS
Trigger: TGAGCTGCACCGTGCCATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGACCAGGTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACCCGCGCACTTCTCCATaGGCTGGGGTGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHPRTSP*AGVGCG
Trigger: GCCACATCCCACCCCAGCTCATGGAGAAGTGCGCGG...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGCAGCCTCGCGGGCCTaGCAGGTGGACTGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRAASRA*QVDCVR
Trigger: GCGCACGCAGTCCACCTGCCAGGCCCGCGAGGCTGC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTCCAGGAGCTGCTaGCGGGCAGCCTCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRLSRSC*RAASRA
Trigger: GGCCCGCGAGGCTGCCCGCCAGCAGCTCCTGGACAG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCGTAAGGCGTGGGCAGTaGCTGCGGTGGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLVRRGQ*LRWGHR
Trigger: CCTGTGCCCCCACCGCAGCCACTGCCCACGCCTTAC...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGTCAAGCGGCCCGCTaGGCAGGCGCAGGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLGQAAR*AGAGCR
Trigger: TCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGACC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGAGGGCAGGCCCAGGTaGTACGGGCATTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLREGRPR*YGHCMG
Trigger: CCCCATGCAATGCCCGTAGCACCTGGGCCTGCCCTC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGCTGCTCACCACGCCATaGTGTGGGGAGGATCGGGGC +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRLLTTP*CGEDRG
Trigger: GCCCCGATCCTCCCCACAGCATGGCGTGGTGAGCAG...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGAGCAGGTCTGCAGCTaGGGCGCCTCGGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCREQVCS*GASAQA
Trigger: TGCCTGCGCCGAGGCGCCGCAGCTGCAGACCTGCTC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGGAGGAGAGCAGGTCTaGAGCTGCGGCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRGGEQV*SCGASA
Trigger: CGCCGAGGCGCCGCAGCTGCAGACCTGCTCTCCTCC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGCGGACGCTGCTCAATaGCAGGCTCAGGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRADAAQ*QAQGTV
Trigger: CACGGTGCCCTGAGCCTGGCATTGAGCAGCGTCCGC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACGCGCCGGCTGCGCACTaGAAATGGGTACAGGAGACC +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHAPAAH*KWVQET
Trigger: GGTCTCCTGTACCCATTTCCAGTGCGCAGCCGGCGC...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAGGGCAGCCCGGACCTaGTCAAGCGGCCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQARAART*SSGPLS
Trigger: GCTCAGCGGGCCGCTTGACCAGGTCCGGGCTGCCCT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCGCGGGCCTGGCAGGTaGACTGCGTGCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRRGPGR*TACAPA
Trigger: TGCTGGAGCGCACGCAGTCCACCTGCCAGGCCCGCG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGTGGGGCTGTGGGCCGTaGCGGCGGCTTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLWGCGP*RRLLLQ
Trigger: CTGAAGAAGAAGCCGCCGCCACGGCCCACAGCCCCA...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGGTGGTTCTGCTGCTaGGGGGCGAGGGGGTACCGG +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLGWFCC*GARGYR
Trigger: CCGGTACCCCCTCGCCCCCCAGCAGCAGAACCACCC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGGAGGAGGCACACCATaGCGCTGCAGGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRGGGTP*RCRTCS
Trigger: GGAGCAGGTCCTGCAGCGCCATGGTGTGCCTCCTCC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGCAGGGCCTGGCAAGCTaGCAACCGGGGACTCCAACC +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRQGLAS*QPGTPT
Trigger: GGTTGGAGTCCCCGGTTGCCAGCTTGCCAGGCCCTG...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp TCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTaGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLSTRRTAAYCT*ASVSAQRTRSW
Trigger: CCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCCTCCTCACTGTACAGTaGCGAGGCCTCGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLLLTVQ*RGLVGS
Trigger: GCTGCCCACGAGGCCTCGTCACTGTACAGTGAGGAG...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTGTCGGGCCGGACGCTaGGAGCCGCGCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRCRAGR*EPRTSP
Trigger: TGGAGAAGTGCGCGGCTCTCAGCGTCCGGCCCGACA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACACTGTACAAGGTTCCTaGCAGTGTCGGGCCGGACGC +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHTVQGS*QCRAGR
Trigger: GCGTCCGGCCCGACACTGTCAGGAACCTTGTACAGT...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACTGGCCCACCGCCTCCTaGAACTTCTGCTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHWPTAS*NFCSSS
Trigger: GCTGCTAGAGCAGAAGTTTCAGGAGGCGGTGGGCCA...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCCACCCCCAGGAGACTaGGTGCCGCCATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAPPPGD*VPPCWL
Trigger: GAGCCAGCATGGCGGCACTCAGTCTCCTGGGGGTGG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCCCACATCCCCCAGCTaGCCCCGAAAGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAPTSPS*PRKASS
Trigger: GCTGGAGGCCTTTCGGGGTCAGCTGGGGGATGTGGG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCCACTCCCGTAGCTGCTaGAGCTGCTGGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLHSRSC*SCWLSH
Trigger: GTGGCTGAGCCAGCAGCTGCAGCAGCTACGGGAGTG...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGATGGAGATGGCCCCTaGCTGGCCCACCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRDGDGP*LAHRLL
Trigger: CAGGAGGCGGTGGGCCAGGCAGGGGCCATCTCCATC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAGATGGAGATGGCCCCTaGCTGGCCCACCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVDGDGP*LAHRLL
Trigger: CAGGAGGCGGTGGGCCAGGCAGGGGCCATCTCCATC...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp ATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGTCCCTGTCCAGGAGCTaGTGGCGGGCAGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: MASLSLSRALWKYATRSPSLSRS*WRAASR
Trigger: CCGCGAGGCTGCCCGCCAGCAGCTCCTGGACAGGGA...CGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGGCCGAGGGGAGACCTaGAACTGGTGGGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSGRGET*NWWGRP
Trigger: GGGCCGGCCCCACCAGTTGCAGGTCTCCCCTCGGCC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTATCAGCCGCAGGGCCTaGGGCCGACGACCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAISRRA*GRRPSA
Trigger: AGCTGAGGGTCGTCGGCCGCAGGCCCTGCGGCTGAT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAGGCTCAGGGCACCGTaGACCATGGGCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLRLRAP*TMGWPL
Trigger: GAGGGGCCAGCCCATGGTGCACGGTGCCCTGAGCCT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACAGCATGTGCTTTCTCTaGTGCCGCATGCGCCGCACC +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHSMCFL*CRMRRT
Trigger: GGTGCGGCGCATGCGGCAGCAGAGAAAGCACATGCT...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGGGAGAGGGCCGGTGTaGGCAGGGCAGCCCGGACCT +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRGRGPV*AGQPGP
Trigger: AGGTCCGGGCTGCCCTGCCCACACCGGCCCTCTCCC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGCACCACGCCATGCTGTaGGGAGGATCGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRHHAML*GGSGHK
Trigger: CTTGTGCCCCGATCCTCCCCACAGCATGGCGTGGTG...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACGAGACCTGCAACTGGTaGGGCCGGCCCTACCCCCAC +
Preference number: 4 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYETCNW*GRPYPH
Trigger: GTGGGGGTAGGGCCGGCCCCACCAGTTGCAGGTCTC...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTGGGGCTGTGTGGCTaGGGATGGGCGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAVGLCG*GWAPGC
Trigger: GCATCCAGGCGCCCATCCCCAGCCACACAGCCCCAC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGGCCGTGGGGCTGTGTaGCTGGGGATGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRGRGAV*LGMGAW
Trigger: CCAGGCGCCCATCCCCAGCCACACAGCCCCACGGCC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGAGTAGCAGCGGGCAATaGCGATGGAACGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRSSSGQ*RWNGLG
Trigger: CCCGAGGCCGTTCCATCGCCATTGCCCGCTGCTACT...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGCTCTGCAGGGCCTaGCAAGCTGGCAACCGGGGA +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAGLCRA*QAGNRG
Trigger: TCCCCGGTTGCCAGCTTGCCAGGCCCTGCAGAGCCC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGGGCTCTGCAGGGCCTaGCAAGCTGGCAACCGGGGA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRGLCRA*QAGNRG
Trigger: TCCCCGGTTGCCAGCTTGCCAGGCCCTGCAGAGCCC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCCGTCAGAGGGCCGGGTaGCCCGCAGCCCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSRQRAG*PAALAR
Trigger: ACGGGCAAGGGCTGCGGGCCACCCGGCCCTCTGACG...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTCCAGGAGGCACTCCTaGGCCTGGCCCAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQASRRHS*AWPSMR
Trigger: CCTCATGCTGGGCCAGGCTCAGGAGTGCCTCCTGGA...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAGATCCGGCCCAGCAGTaGGGCAGTGTCGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVDPAQQ*GSVGVL
Trigger: GAGAACCCCGACACTGCCTCACTGCTGGGCCGGATC...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGGTCAAGCGGCCCGCTaGGCAGGCGCAGGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRGQAAR*AGAGCR
Trigger: TCGGCAACCTGCGCCTGCTCAGCGGGCCGCTTGACC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACGTAGTCATCCTTGCCTaGGCGCAGCACCACACGGTT +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHVVILA*AQHHTV
Trigger: AACCGTGTGGTGCTGCGCTCAGGCAAGGATGACTAC...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACATGCGCCGCACCAGCTaGGGCAGCTCAGGGATTCCG +
Preference number: 4 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYMRRTS*GSSGIP
Trigger: CGGAATCCCTGAGCTGCCTCAGCTGGTGCGGCGCAT...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCGTAGCTGCTGCAGCTaGTGGCTCAGCCACGAGCCC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQARSCCS*WLSHEP
Trigger: GGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCTACG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGCCAGATCATGGGCATaGGGGGCACGGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRARSWA*GARPPW
Trigger: CCATGGAGGCCGTGCCCCGCATGCCCATGATCTGGC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGATAAGCTCACGCAGCTaGTGCTCCAGGGACACGCGC +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRISSRS*CSRDTR
Trigger: GCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTTAT...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGTGGGCGGCCAGGTTCTaGTCCAGGTACACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRWAARF*SRYTFS
Trigger: GCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCA...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTACCCGCCGCACGGCTaGGTACTGCACGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRYPPHG*VLHVGL
Trigger: GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCCTGGCAGGTGGACTaGGTGCGCTCCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAAWQVD*VRSSRA
Trigger: TGCTCTGCTGGAGCGCACGCAGTCCACCTGCCAGGC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGATCCCTGTCCAGGAGCTaGTGGCGGGCAGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRSLSRS*WRAASR
Trigger: CCGCGAGGCTGCCCGCCAGCAGCTCCTGGACAGGGA...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGAGGTGCTACGGGCATTaGATGGGGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRRCYGH*MGPWGP
Trigger: AGGGCCCCAGGGCCCCATGCAATGCCCGTAGCACCT...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGGCCGAGGGGAGACCTaGAACTGGTGGGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQGRGET*NWWGRP
Trigger: GGGCCGGCCCCACCAGTTGCAGGTCTCCCCTCGGCC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGAGCTCCTGCTGCAACTaGCGCAGCCTCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRSSCCN*RSLSGC
Trigger: GCATCCTGAGAGGCTGCGGCAGTTGCAGCAGGAGCT...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCGGACGCTGCTCAATaGCAGGCTCAGGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAADAAQ*QAQGTV
Trigger: CACGGTGCCCTGAGCCTGGCATTGAGCAGCGTCCGC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGTGGCCCGCAGCCCTTaGCCGTTATGGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRVARSP*PLWACR
Trigger: TCTGCAGGCCCATAACGGGCAAGGGCTGCGGGCCAC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAGTGGCCCGCAGCCCTTaGCCGTTATGGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVVARSP*PLWACR
Trigger: TCTGCAGGCCCATAACGGGCAAGGGCTGCGGGCCAC...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGTCCAGCCAGATCATaGGCATGCGGGGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLGPARS*ACGARP
Trigger: AGGCCGTGCCCCGCATGCCCATGATCTGGCTGGACC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGAGAGGGCCGGTGTaGGCAGGGCAGCCCGGACCT +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCGRGPV*AGQPGP
Trigger: AGGTCCGGGCTGCCCTGCCCACACCGGCCCTCTCCC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp ATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGCACGGCCTTGTCCTCTaGGGAGAGGGCCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: MASLSLSRALWKYATRSPHGLVL*GEGRCG
Trigger: CCCACACCGGCCCTCTCCCCAGAGGACAAGGCCGTG...CGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGCGCGGGCCTGGCAGGTaGACTGCGTGCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKRGPGR*TACAPA
Trigger: TGCTGGAGCGCACGCAGTCCACCTGCCAGGCCCGCG...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGCAGCCTCGCGGGCCTaGCAGGTGGACTGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQAASRA*QVDCVR
Trigger: GCGCACGCAGTCCACCTGCCAGGCCCGCGAGGCTGC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTGTGTAGGCAGGGGCTaGGTAGAGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLCVGRG*VEGRPR
Trigger: CCTGGGCCTGCCCTCTACCCAGCCCCTGCCTACACA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGAGGAGTCCTGGGGCCTaGGGTGGGAAGAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRRSPGA*GGKRCG
Trigger: TCCACATCTCTTCCCACCCCAGGCCCCAGGACTCCT...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAGGACTAGGGGTGGACTaGCCAGCAGACGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVGLGVD*PADEGP
Trigger: AGGGCCCTCGTCTGCTGGCCAGTCCACCCCTAGTCC...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGGGCACCGTGCACCATaGGCTGGCCCCTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSGHRAP*AGPSRW
Trigger: CCACCGAGAGGGGCCAGCCCATGGTGCACGGTGCCC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGGAGGAGGCACACCATaGCGCTGCAGGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRGGGTP*RCRTCS
Trigger: GGAGCAGGTCCTGCAGCGCCATGGTGTGCCTCCTCC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCAGGGCCTGGCAAGCTaGCAACCGGGGACTCCAACC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRQGLAS*QPGTPT
Trigger: GGTTGGAGTCCCCGGTTGCCAGCTTGCCAGGCCCTG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCGTCAGAGGGCCGGGTaGCCCGCAGCCCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQRQRAG*PAALAR
Trigger: ACGGGCAAGGGCTGCGGGCCACCCGGCCCTCTGACG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGAGGCCTGCTCGTACTTaGTGTCCTCATGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLRPART*CPHGPQ
Trigger: CTGTGGCCCATGAGGACATCAAGTACGAGCAGGCCT...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTTTGGTCCAAGTCGCTaGGTACCCGCCGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRFGPSR*VPAARL
Trigger: CAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GTGGGATGTGGCTGTAGGCATCAAGGTTGTCCACCGTCTCGGGATCCAACTGCATCGGGGCCTGAGAATTaGGGAGGTGGGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: VGCGCRHQGCPPSRDPTASGPEN*GGGAEG
Trigger: CCCCTCGGCCCCACCTCCTCAATTCTCAGGCCCCGA...TGCAGTTGGATCCCGAGACGGTGGACAACCTTGATGCCTACAGCCACATCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGGCTGCTGTGGGGGCTaGGGCCCAAACGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRGCCGG*GPNACE
Trigger: TTCACAAGCGTTTGGGCCTCAGCCCCCACAGCAGCC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTGGAGATGGGGCAGGTaGAGGCACCAGGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLWRWGR*RHQVGT
Trigger: AGTCCCCACCTGGTGCCTTCACCTGCCCCATCTCCA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCATGGAGATGGGGCAGGTaGAGGCACCAGGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: PAATAAASQDAHRGPAQSWRWGR*RHQVGT
Trigger: AGTCCCCACCTGGTGCCTTCACCTGCCCCATCTCCA...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACAGCTGCAGTGCACAATaGTGGGCGTGTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYSCSAQ*WACAAA
Trigger: GGCCGCTGCACACGCCCATCATTGTGCACTGCAGCT...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTGGCCTGGATGGAGCTaGTGGGCACATCCCCACCGA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRWPGWS*WAHPHR
Trigger: TCGGTGGGGATGTGCCCATCAGCTCCATCCAGGCCA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGAGAGACTGTGCCCACTaGGAAGCTCTGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRRDCAH*EALLGV
Trigger: CACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCT...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACGGCCACAGACTTGCCTaGGAAGATCTCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHGHRLA*EDLCPV
Trigger: GACAGGACAGAGATCTTCTCAGGCAAGTCTGTGGCC...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGCGAAGGCGCCGGCTaGGCACTGGAAATGGGTACA +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAGEGAG*ALEMGT
Trigger: TGTACCCATTTCCAGTGCGCAGCCGGCGCCTTCGCC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCGCAGGTTGCCGACGTaGAGGTTCATGGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLRRLPT*RFMARC
Trigger: GCACCGTGCCATGAACCTGCACGTCGGCAACCTGCG...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCGGATGGGCGCCTGGATaGTATCTACTGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLGWAPG*YLLWWW
Trigger: CCACCACCACAGTAGATAGCATCCAGGCGCCCATCC...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGGGGTTGCTTAGCCCCTaGAGGGTAGGTGTAAGGCGT +
Preference number: 4 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLGLLSP*RVGVRR
Trigger: ACGCCTTACACCTACCCTGCAGGGGCTAAGCAACCC...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCCGACGACCCTCAGCTaGATCCACCTTGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAPTTLS*IHLGGL
Trigger: CAGCCCACCAAGGTGGATGCAGCTGAGGGTCGTCGG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGCCTCCAGCTCCTGCTaGAACTGCCGCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRASSSC*NCRSLS
Trigger: TGAGAGGCTGCGGCAGTTGCAGCAGGAGCTGGAGGC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAAGGCCTCCAGCTCCTaGTGCAACTGCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAKASSS*CNCRSL
Trigger: GAGGCTGCGGCAGTTGCAGCAGGAGCTGGAGGCCTT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGCATGGGTTTCGGTGCTaGGGACGCTGCTCAATGCCA +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRHGFRC*GRCSMP
Trigger: TGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATG...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTCTGGTCTCGGAACTaGAGGCTCAGCACGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVLWSRN*RLSTRS
Trigger: GGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCAGAG...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGCACACCATGGCGCTaGAGGACCTGCTCCACGTGT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLGTPWR*RTCSTC
Trigger: ACACGTGGAGCAGGTCCTGCAGCGCCATGGTGTGCC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCCATGGCCCCCAGCATaGAGTGCAGCGCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAPWPPA*SAALQG
Trigger: ACCTTGGAGCGCTGCACTCCATGCTGGGGGCCATGG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGCGCCGGCTGCGCACTaGAAATGGGTACAGGAGACC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRAPAAH*KWVQET
Trigger: GGTCTCCTGTACCCATTTCCAGTGCGCAGCCGGCGC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCTTGTCCAGGGCGCTCTaGAAGTATGCAACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLLSRAL*KYATRS
Trigger: GGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAA...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGTGTCAGGCAGTCGTaGGCCAGCCACCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAGVRQS*ASHHVR
Trigger: CCTGACATGGTGGCTGGCCCACGACTGCCTGACACC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGGATGCTATCTACTGTaGTGGTGGCTGGCCGAACCG +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRGCYLL*WWLAEP
Trigger: CGGTTCGGCCAGCCACCACCACAGTAGATAGCATCC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGTAAGGCGTGGGCAGTaGCTGCGGTGGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSVRRGQ*LRWGHR
Trigger: CCTGTGCCCCCACCGCAGCCACTGCCCACGCCTTAC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGGCCCAATCCTTaGGGCTGGAAAACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRLGPNP*GWKTCG
Trigger: CCCGCAGGTTTTCCAGCCCCAAGGATTGGGCCCCAG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGTAAGAGGGGCTGCCTaGGGGCCCATGGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLVRGAA*GPMGLV
Trigger: TACCAGACCCATGGGCCCCCAGGCAGCCCCTCTTAC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCAGCTGCATCCACCTTaGTGGGCTGCAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAQLHPP*WAAAGA
Trigger: AGCCCCTGCTGCAGCCCACCAAGGTGGATGCAGCTG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAGCACGCGCTCCACATaGGTTTCGGTGCTGCGGACG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQASTRST*VSVLRT
Trigger: CGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAAGCACGCGCTCCACATaGGTTTCGGTGCTGCGGACG +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVSTRST*VSVLRT
Trigger: CGTCCGCAGCACCGAAACCCATGTGGAGCGCGTGCT...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACTTGGCAATGGTGGCCTaGATGGAGCTGATGGGCACA +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHLAMVA*MELMGT
Trigger: TGTGCCCATCAGCTCCATCCAGGCCACCATTGCCAA...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGGCTCCTCCTTAGGCTaGGGAGCCTCAGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRGSSLG*GASGSG
Trigger: CCCACTACCTGAGGCTCCCCAGCCTAAGGAGGAGCC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
3UTR CAA 72 bp GTACAGGAGACCTTCATGCCCTCCTCAGACACCCGCTaGTCCATGGCCCCCAGCATGGAGTGCAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VQETFMPSSDTR*SMAPSMECSAP
Trigger: TGGAGCGCTGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGAGGGCATGAAGGTCTCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp GGCCAAGTGGGGAAGTGCAGGTGCACAAGAGAGCGCTaGAGGCTCTGGTCTCGGAACTGCAGGCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: GQVGKCRCTRER*RLWSRNCRLST
Trigger: CGTGCTGAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCACCTGCACTTCCCCACTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACCTACCACCTGTGCACTaGTGCGGGCCACCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYLPPVH*CGPPES
Trigger: GCTTTCTGGTGGCCCGCATCAGTGCACAGGTGGTAG...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACCGCGCACTTCTCCATaGGCTGGGGTGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRPRTSP*AGVGCG
Trigger: GCCACATCCCACCCCAGCTCATGGAGAAGTGCGCGG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTTGTCGGGCCGGACGCTaGGAGCCGCGCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFCRAGR*EPRTSP
Trigger: TGGAGAAGTGCGCGGCTCTCAGCGTCCGGCCCGACA...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTGGCCCACCGCCTCCTaGAACTTCTGCTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLWPTAS*NFCSSS
Trigger: GCTGCTAGAGCAGAAGTTTCAGGAGGCGGTGGGCCA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGTCGGGGCCTGAGAATTaGGGAGGTGGGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQSGPEN*GGGAEG
Trigger: CCCCTCGGCCCCACCTCCTCAATTCTCAGGCCCCGA...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGGAAAGGCAGAGCCCCTaGGTGGGCTGGCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKERQSP*VGWQRV
Trigger: GACCCTCTGCCAGCCCACTCAGGGGCTCTGCCTTTC...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACTACTGTCATAGGGCATaGCATCCTGGTGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHYCHRA*HPGAGS
Trigger: AGAACCGGCACCAGGATGTCATGCCCTATGACAGTA...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAATGCGCCGCACCAGCTaGGGCAGCTCAGGGATTCCG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRMRRTS*GSSGIP
Trigger: CGGAATCCCTGAGCTGCCTCAGCTGGTGCGGCGCAT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCAGGAGGCCGAATGCTaGGCTTGGCAATGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAQEAEC*AWQWWP
Trigger: AGGCCACCATTGCCAAGCTCAGCATTCGGCCTCCTG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACGTAGCTGCTGCAGCTaGTGGCTCAGCCACGAGCCC +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRRSCCS*WLSHEP
Trigger: GGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCTACG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGTAATCTACCACCTGTaGACTGATGCGGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRVIYHL*TDAGHQ
Trigger: CTGGTGGCCCGCATCAGTGCACAGGTGGTAGATTAC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTCCCCGAACTTCTGCTaGTCCTCGGCCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQASPNFC*SSACFP
Trigger: GGGAAAGCAGGCCGAGGAGCAGCAGAAGTTCGGGGA...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCGCTCCCCGAACTTCTaGTGCTCCTCGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLRSPNF*CSSACF
Trigger: AAAGCAGGCCGAGGAGCAGCAGAAGTTCGGGGAGCG...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACAAGCGAAGCGCGTCTTaGACAGTGTCAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYKRSAS*TVSGWP
Trigger: GGGCCAGCCTGACACTGTGCAAGACGCGCTTCGCTT...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCGCACGGCTGCGTACTaGACGTTGGCCTCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRRTAAY*TLASVS
Trigger: ACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGCCTGGCAGGTGGACTaGGTGCGCTCCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSAWQVD*VRSSRA
Trigger: TGCTCTGCTGGAGCGCACGCAGTCCACCTGCCAGGC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGAGGTGCTACGGGCATTaGATGGGGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: IELVQGALEVCNPLPELLRCYGH*MGPWGP
Trigger: AGGGCCCCAGGGCCCCATGCAATGCCCGTAGCACCT...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCCCCCACATAGGGACTaGTCACCACGCCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRPPHRD*SPRHAV
Trigger: CACAGCATGGCGTGGTGAGCAGTCCCTATGTGGGGG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCCCCCACATAGGGACTaGTCACCACGCCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLPPHRD*SPRHAV
Trigger: CACAGCATGGCGTGGTGAGCAGTCCCTATGTGGGGG...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAATGGTAAGAGGGGCTaGCTGGGGGCCCATGGGTCT +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQANGKRG*LGAHGS
Trigger: AGACCCATGGGCCCCCAGGCAGCCCCTCTTACCATT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAATGGTAAGAGGGGCTaGCTGGGGGCCCATGGGTCT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLNGKRG*LGAHGS
Trigger: AGACCCATGGGCCCCCAGGCAGCCCCTCTTACCATT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAGCTCCTGCTGCAACTaGCGCAGCCTCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQASSCCN*RSLSGC
Trigger: GCATCCTGAGAGGCTGCGGCAGTTGCAGCAGGAGCT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCCGGTGCTGCGGACGCTaGTCAATGCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSRCCGR*SMPGSG
Trigger: CCCTGAGCCTGGCATTGAGCAGCGTCCGCAGCACCG...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGTGCAAAGGCTCCCGTaGGGCCCACACCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRVQRLP*GPHQSC
Trigger: GCAGCTCTGGTGTGGGCCGCACGGGAGCCTTTGCAC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGATGTGCTTTCTCTGCTaGCGCATGCGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRMCFLC*RMRRTS
Trigger: GCTGGTGCGGCGCATGCGGCAGCAGAGAAAGCACAT...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp ATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGGGCACACCATGGCGCTaGAGGACCTGCTCCACGTGT +
Preference number: 4 (lower is better)
Translates to: MASLSLSRALWKYATRSPGTPWR*RTCSTC
Trigger: ACACGTGGAGCAGGTCCTGCAGCGCCATGGTGTGCC...CGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGACACCCGCTTGTCCATaGCCCCCAGCATGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRTPACP*PPAWSA
Trigger: TGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGT...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGCCTCGTGGGCAGCCATaGGTACCAGTTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRPRGQP*VPVWQR
Trigger: TCTTTGCCAAACTGGTACCCATGGCTGCCCACGAGG...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACAGAGGACACGGTCCTaGGCGGCCAGGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRQRTRS*AARFCS
Trigger: GGAGCAGAACCTGGCCGCCCAGGACCGTGTCCTCTG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCCAGAGGACACGGTCCTaGGCGGCCAGGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSQRTRS*AARFCS
Trigger: GGAGCAGAACCTGGCCGCCCAGGACCGTGTCCTCTG...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGCTGCGTACTGCACGTTaGCCTCTGTCAGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRLRTAR*PLSVHR
Trigger: TCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAG...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGGGCTGGGAGGAAAGTaGAGCGGGGTGGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSGLGGK*SGVALP
Trigger: GGGAAGTGCCACCCCGCTCCACTTTCCTCCCAGCCC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAGATAGTGGGGTCCTaGGCCTGTGGAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAEIVGS*ACGAGE
Trigger: TTCCCCAGCTCCACAGGCCCAGGACCCCACTATCTC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGCTGTATCAGCTGGGTaGGGCCCGAGTAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLAVSAG*GPSRYQ
Trigger: CTGGTACCTACTCGGGCCCCACCCAGCTGATACAGC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAGCTGTATCAGCTGGGTaGGGCCCGAGTAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVAVSAG*GPSRYQ
Trigger: CTGGTACCTACTCGGGCCCCACCCAGCTGATACAGC...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGATCCCAGAAGAGAAGTaGTGCTGTGCCGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRIPEEK*CCAGMG
Trigger: ACCCATCCCGGCACAGCACCACTTCTCTTCTGGGAT...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTATCCTGGGGCCTGGGGTaGGAAGAGATGTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVSWGLG*EEMWML
Trigger: CAGCATCCACATCTCTTCCCACCCCAGGCCCCAGGA...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAGGACCATATGCCAGTaGGGGATGGGGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQARTICQ*GMGRLR
Trigger: CCTCAGCCTCCCCATCCCCCACTGGCATATGGTCCT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTAAGGACCATATGCCAGTaGGGGATGGGGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVRTICQ*GMGRLR
Trigger: CCTCAGCCTCCCCATCCCCCACTGGCATATGGTCCT...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGGACTAGGGGTGGACTaGCCAGCAGACGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSGLGVD*PADEGP
Trigger: AGGGCCCTCGTCTGCTGGCCAGTCCACCCCTAGTCC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp ATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGGGTGAAGGCACCAGGTaGGGACTAGGGGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: MASLSLSRALWKYATRSPGEGTR*GLGVDW
Trigger: CCAGTCCACCCCTAGTCCCCACCTGGTGCCTTCACC...CGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGAGCGCTTGAGGCTCTaGTCTCGGAACTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLERLRL*SRNCRL
Trigger: GAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACGGGCGGGGAGGAAGATaGGATTGGGGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYGRGGR*DWGRLW
Trigger: CCAGAGTCTACCCCAATCCCATCTTCCTCCCCGCCC...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGGGGGCTTCAGGCACTaGCGGCTCCTCCTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRGGFRH*RLLLRL
Trigger: CAGCCTAAGGAGGAGCCGCCAGTGCCTGAAGCCCCC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
3UTR CAA 72 bp GATCCCAGAAGAGAAGTGGTGCTGTGCCGGGATGGGTaGCTTAGCCCCTGCAGGGTAGGTGTAAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: DPRREVVLCRDG*LSPCRVGVRRG
Trigger: CCCACGCCTTACACCTACCCTGCAGGGGCTAAGCAACCCATCCCGGCACAGCACCACTTCTCTTCTGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp GATGGAACGGCCTCGGGCATCATGTTCCTGCGCATCTaGCAGCTCTCGCCAGACAGTGTCCAGAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: DGTASGIMFLRI*QLSPDSVQSSH
Trigger: GTGGGAGCTCTGGACACTGTCTGGCGAGAGCTGCAAGATGCGCAGGAACATGATGCCCGAGGCCGTTCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGATCCGGCCCAGCAGTaGGGCAGTGTCGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQDPAQQ*GSVGVL
Trigger: GAGAACCCCGACACTGCCTCACTGCTGGGCCGGATC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGCTCCTTTTACAGGCTaGAGAGTGTCCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRAPFTG*RVSNAG
Trigger: CCCAGCATTGGACACTCTTCAGCCTGTAAAAGGAGC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCATCCGTGAACACACCTaGCAGCACTTGCATGGACTG +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLIREHT*QHLHGL
Trigger: CAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGAT...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTTTGGTCCAAGTCGCTaGGTACCCGCCGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSFGPSR*VPAARL
Trigger: CAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGCACAAGAGAGCGCTTaGGGCTCTGGTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRAQESA*GSGLGT
Trigger: AGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAGGTCCTGGGAGTCCTaGGGAAGGTGGTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQARSWES*GRWFFW
Trigger: CCAGAAGAACCACCTTCCTCAGGACTCCCAGGACCT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTGGCCTGGATGGAGCTaGTGGGCACATCCCCACCGA +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSWPGWS*WAHPHR
Trigger: TCGGTGGGGATGTGCCCATCAGCTCCATCCAGGCCA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAGAGACTGTGCCCACTaGGAAGCTCTGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQARDCAH*EALLGV
Trigger: CACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCCACTCCCGTAGCTGCTaGAGCTGCTGGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSHSRSC*SCWLSH
Trigger: GTGGCTGAGCCAGCAGCTGCAGCAGCTACGGGAGTG...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGGCCACTCCCGTAGCTaGTGCAGCTGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQGHSRS*CSCWLS
Trigger: GCTGAGCCAGCAGCTGCAGCAGCTACGGGAGTGGCC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGCCAGATCATGGGCATaGGGGGCACGGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCARSWA*GARPPW
Trigger: CCATGGAGGCCGTGCCCCGCATGCCCATGATCTGGC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGCTCCAAGGCCCGGCATaGCTCCTTGTAGTAATCTAC +
Preference number: 4 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLLQGPA*LLVVIY
Trigger: GTAGATTACTACAAGGAGGCATGCCGGGCCTTGGAG...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGAGGCCACCAGGGTCTaGAGCGTGGAGTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCREATRV*SVEFHF
Trigger: AAAGTGGAACTCCACGCTGCAGACCCTGGTGGCCTC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGAGGGCAGGCCCAGGTaGTACGGGCATTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCEGRPR*YGHCMG
Trigger: CCCCATGCAATGCCCGTAGCACCTGGGCCTGCCCTC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCTGCTCACCACGCCATaGTGTGGGGAGGATCGGGGC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQLLTTP*CGEDRG
Trigger: GCCCCGATCCTCCCCACAGCATGGCGTGGTGAGCAG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGATGGGCGCCTGGATaGTATCTACTGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAGWAPG*YLLWWW
Trigger: CCACCACCACAGTAGATAGCATCCAGGCGCCCATCC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGGGAAGAGATGTGGATaGTGGAGTGGAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRGKRCG*WSGRGC
Trigger: GCAGCCCCTTCCACTCCAGCATCCACATCTCTTCCC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTCCCCAGGAGACTGAGTaGCGCCATGCTGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCPQETE*RHAGSP
Trigger: CGGAGAGCCAGCATGGCGGCACTCAGTCTCCTGGGG...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCGGGCATCATGTTCCTaGGCATCTTGCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRRASCS*ASCSSR
Trigger: GCGAGAGCTGCAAGATGCGCAGGAACATGATGCCCG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCATGGGTTTCGGTGCTaGGGACGCTGCTCAATGCCA +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLHGFRC*GRCSMP
Trigger: TGGCATTGAGCAGCGTCCGCAGCACCGAAACCCATG...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGATTCTCTGCTGCCGCATaGGCCGCACCAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRFSAAA*AAPAEA
Trigger: TGCCTCAGCTGGTGCGGCGCATGCGGCAGCAGAGAA...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGCACGTGTCTCACCACTaGCTCATAGCAGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRHVSHH*LIAEPE
Trigger: CTCAGGTTCTGCTATGAGGCAGTGGTGAGACACGTG...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCCTTCTGGCTGATGCTTaGACTGGCCAAGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLLLADA*TGQGFA
Trigger: TGCAAACCCTTGGCCAGTGCAAGCATCAGCCAGAAG...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGAGCTGCTGCAGCTGCTaGCTCAGCCACGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQSCCSC*LSHEPS
Trigger: GCTGGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCT...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGTCCAGGGACACGCGCTaGTCCCGCATCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQSRDTR*SRISCT
Trigger: GGTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGA...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTTCCAGGGACACGCGCTaGTCCCGCATCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCSRDTR*SRISCT
Trigger: GGTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGA...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGGGTGTCAGGCAGTCGTaGGCCAGCCACCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKGVRQS*ASHHVR
Trigger: CCTGACATGGTGGCTGGCCCACGACTGCCTGACACC...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCTGGGAGGAAAGTaGAGCGGGGTGGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCGLGGK*SGVALP
Trigger: GGGAAGTGCCACCCCGCTCCACTTTCCTCCCAGCCC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCCACCACGCCATGCTGTaGGGAGGATCGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSHHAML*GGSGHK
Trigger: CTTGTGCCCCGATCCTCCCCACAGCATGGCGTGGTG...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGGGGGAGACCTGCAACTaGTGGGGCCGGCCCTACCCC +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQGETCN*WGRPYP
Trigger: GGGGTAGGGCCGGCCCCACCAGTTGCAGGTCTCCCC...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTATCTACTGTGGTGGTaGCTGGCCGAACCGCCATGG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAYLLWW*LAEPPW
Trigger: CCATGGCGGTTCGGCCAGCCACCACCACAGTAGATA...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGGTAGGTGTAAGGCGTaGGCAGTGGCTGCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQGRCKA*AVAAVG
Trigger: CCCCACCGCAGCCACTGCCCACGCCTTACACCTACC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGCTGGGGCCCAATCCTTaGGGCTGGAAAACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKLGPNP*GWKTCG
Trigger: CCCGCAGGTTTTCCAGCCCCAAGGATTGGGCCCCAG...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGCAGCTGCATCCACCTTaGTGGGCTGCAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKQLHPP*WAAAGA
Trigger: AGCCCCTGCTGCAGCCCACCAAGGTGGATGCAGCTG...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGTAGCAGCGGGCAATaGCGATGGAACGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRSSSGQ*RWNGLG
Trigger: CCCGAGGCCGTTCCATCGCCATTGCCCGCTGCTACT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGCTGGCCCCTCTCGGTaGGGAAGTAGCGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSAGPSR*GSSVPL
Trigger: AAGTGGCACGCTACTTCCCCACCGAGAGGGGCCAGC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGGCTGGCCCCTCTCGGTaGGGAAGTAGCGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKAGPSR*GSSVPL
Trigger: AAGTGGCACGCTACTTCCCCACCGAGAGGGGCCAGC...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGAGCGCAGCAAGTTGCTaGGGCTGTCGGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: IELVQGALEVCNPLPELLSAASC*GCRAGL
Trigger: TAGGCCTGCCCGACAGCCCCAGCAACTTGCTGCGCT...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGGGCTCCTCCTTAGGCTaGGGAGCCTCAGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKGSSLG*GASGSG
Trigger: CCCACTACCTGAGGCTCCCCAGCCTAAGGAGGAGCC...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAAGCTCTGCTGGGTGTaGGCAGGTGGGCATGAGATG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAKLCWV*AGGHEM
Trigger: CATCTCATGCCCACCTGCCCACACCCAGCAGAGCTT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAAGCTCTGCTGGGTGTaGGCAGGTGGGCATGAGATG +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLKLCWV*AGGHEM
Trigger: CATCTCATGCCCACCTGCCCACACCCAGCAGAGCTT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
3UTR CAA 72 bp GGCTGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTaGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GWPLANLMASLS*SRALWKYATRS
Trigger: GGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp TGGTTCTTCTGGCTGATGCTTGCACTGGCCAAGGGTTaGCATGGAGGAGGCACACCATGGCGCTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: WFFWLMLALAKG*HGGGTPWRCRT
Trigger: GGTCCTGCAGCGCCATGGTGTGCCTCCTCCATGCAAACCCTTGGCCAGTGCAAGCATCAGCCAGAAGAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp AGCCCTTGCCCGTTATGGGCCTGCAGAAAGTTATGCTaGCTCATCCGCTGTTTGCCCCGCAGGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SPCPLWACRKLC*LIRCLPRRELS
Trigger: GGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGATCTCTGTCCAGGTaGCAGGGACAGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRRSLSR*QGQRPP
Trigger: AGGAGGCCGCTGTCCCTGTCACCTGGACAGAGATCT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265562.5
CDS-3UTR TCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTCTCCTCACTGTACAGTaGCGAGGCCTCGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCLLTVQ*RGLVGS
Trigger: GCTGCCCACGAGGCCTCGTCACTGTACAGTGAGGAG...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCACTGTACAAGGTTCCTaGCAGTGTCGGGCCGGACGC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSTVQGS*QCRAGR
Trigger: GCGTCCGGCCCGACACTGTCAGGAACCTTGTACAGT...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGCTCAGCCTTGGAGGTaGTGGAGATGGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQAQPWR*WRWPLP
Trigger: AGGCAGGGGCCATCTCCATCACCTCCAAGGCTGAGC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTGCTCAGCCTTGGAGGTaGTGGAGATGGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFAQPWR*WRWPLP
Trigger: AGGCAGGGGCCATCTCCATCACCTCCAAGGCTGAGC...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGGCTGCTGTGGGGGCTaGGGCCCAAACGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQGCCGG*GPNACE
Trigger: TTCACAAGCGTTTGGGCCTCAGCCCCCACAGCAGCC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGCCCACATCCCCCAGCTaGCCCCGAAAGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQPTSPS*PRKASS
Trigger: GCTGGAGGCCTTTCGGGGTCAGCTGGGGGATGTGGG...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGTGCCGGTTCTTCAGTaGGTAGCAGCGGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSVPVLQ*VAAGNG
Trigger: GCCATTGCCCGCTGCTACTCACTGAAGAACCGGCAC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACCACGCAGCTGGCATTaGTGTAGTCATCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVPRSWH*CSHPCL
Trigger: CAGGCAAGGATGACTACATCAATGCCAGCTGCGTGG...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTCTGCTCATGGACCATaGGCCAGAAGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLSAHGP*ARSQQL
Trigger: CAGCTGCTGACTTCTGGCTCATGGTCCATGAGCAGA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCATCTGCTCATGGACCATaGGCCAGAAGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAATAAASQDAHRGPAQSSAHGP*ARSQQL
Trigger: CAGCTGCTGACTTCTGGCTCATGGTCCATGAGCAGA...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACGTGCACCTCCTGGATaGAGCGCAGCAAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRRAPPG*SAASCW
Trigger: CCAGCAACTTGCTGCGCTTCATCCAGGAGGTGCACG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGCGTGCACCTCCTGGATaGAGCGCAGCAAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: IELVQGALEVCNPLPELLRAPPG*SAASCW
Trigger: CCAGCAACTTGCTGCGCTTCATCCAGGAGGTGCACG...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGAGCTGCAGTGCACAATaGTGGGCGTGTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQSCSAQ*WACAAA
Trigger: GGCCGCTGCACACGCCCATCATTGTGCACTGCAGCT...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGCAGGAGGCCGAATGCTaGGCTTGGCAATGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: IELVQGALEVCNPLPELLQEAEC*AWQWWP
Trigger: AGGCCACCATTGCCAAGCTCAGCATTCGGCCTCCTG...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGCTGTTCAGGTCTTGTTaGGTGTCCAGAGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRLFRSC*VSRVDP
Trigger: TGGATCCACTCTGGACACTCAACAAGACCTGAACAG...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTAATCTACCACCTGTaGACTGATGCGGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAVIYHL*TDAGHQ
Trigger: CTGGTGGCCCGCATCAGTGCACAGGTGGTAGATTAC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGCGCTCCCCGAACTTCTaGTGCTCCTCGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKRSPNF*CSSACF
Trigger: AAAGCAGGCCGAGGAGCAGCAGAAGTTCGGGGAGCG...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTCGCAGGTTGCCGACGTaGAGGTTCATGGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCRRLPT*RFMARC
Trigger: GCACCGTGCCATGAACCTGCACGTCGGCAACCTGCG...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAATAAGCTCACGCAGCTaGTGCTCCAGGGACACGCGC +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRISSRS*CSRDTR
Trigger: GCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTTAT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GTGGGATGTGGCTGTAGGCATCAAGGTTGTCCACCGTCTCGGGATCCAACTGCACGCACGGCTGCGTACTaGACGTTGGCCTCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: VGCGCRHQGCPPSRDPTARTAAY*TLASVS
Trigger: ACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCG...TGCAGTTGGATCCCGAGACGGTGGACAACCTTGATGCCTACAGCCACATCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTGCTCTCCAGATCTaGGTAGAAGTCCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRLALQI*VEVPAL
Trigger: GAGGGCAGGGACTTCTACGCAGATCTGGAGAGCAAG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGTCTCCTGCTTCCACTaGCTCACTCTCCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSVSCFH*LTLLPA
Trigger: CGCAGGGAGGAGAGTGAGGCAGTGGAAGCAGGAGAC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTCCGACGACCCTCAGCTaGATCCACCTTGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCPTTLS*IHLGGL
Trigger: CAGCCCACCAAGGTGGATGCAGCTGAGGGTCGTCGG...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTAAGGCCTCCAGCTCCTaGTGCAACTGCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCKASSS*CNCRSL
Trigger: GAGGCTGCGGCAGTTGCAGCAGGAGCTGGAGGCCTT...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTATGTTCCTGCGCATCTTaGAGCTCTCGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVCSCAS*SSRQTV
Trigger: CACTGTCTGGCGAGAGCTGCAAGATGCGCAGGAACA...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTTTCTCTGCTGCCGCATaGGCCGCACCAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFFSAAA*AAPAEA
Trigger: TGCCTCAGCTGGTGCGGCGCATGCGGCAGCAGAGAA...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCACTGGCCAAGGGTTTaGATGGAGGAGGCACACCAT +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRHWPRV*MEEAHH
Trigger: ATGGTGTGCCTCCTCCATGCAAACCCTTGGCCAGTG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGATGCTCATCCGCTGTTTaGCCCGCAGGGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRCSSAV*PAGSCP
Trigger: TGGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCA...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGGCAGAAAGTTATGCTTaGTCATCCGCTGTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRAESYA*SSAVCP
Trigger: GGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGC...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGACACCCGCTTGTCCATaGCCCCCAGCATGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKTPACP*PPAWSA
Trigger: TGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGT...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTTGAGCGTAAGGATCTaGCGGCTCATGTCGACGCTG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQALSVRI*RLMSTL
Trigger: CAGCGTCGACATGAGCCGCCAGATCCTTACGCTCAA...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTATTCTTCCAGTCCTTCTaGATCCGGCCCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVFFQSF*IRPSSE
Trigger: CTCACTGCTGGGCCGGATCCAGAAGGACTGGAAGAA...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTGCACAGTGTCAGGCTaGCCCTTGGCCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRCTVSG*PLANLM
Trigger: CATCAAGTTGGCCAAGGGCCAGCCTGACACTGTGCA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AAGCTCACGCAGCTGCTGCTCCAGGGACACGCGCTGGTCCCGCATCTCCTGCACGTGATGTCATCTTTCTaGATAAGCTCACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLTQLLLQGHALVPHLLHVMSSF*ISSRSC
Trigger: GCAGCTGCGTGAGCTTATCCAGAAAGATGACATCAC...GTGCAGGAGATGCGGGACCAGCGCGTGTCCCTGGAGCAGCAGCTGCGTGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCCAGGGTCTGCAGCGTaGAGTTCCACTTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAPGSAA*SSTFGP
Trigger: TGGACCAAAAGTGGAACTCCACGCTGCAGACCCTGG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGAGATAGTGGGGTCCTaGGCCTGTGGAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLREIVGS*ACGAGE
Trigger: TTCCCCAGCTCCACAGGCCCAGGACCCCACTATCTC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTACTGTGGTGGTGGCTaGCCGAACCGCCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSYCGGG*PNRHGQ
Trigger: TTGGCCATGGCGGTTCGGCCAGCCACCACCACAGTA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGATCCCAGAAGAGAAGTaGTGCTGTGCCGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRIPEEK*CCAGMG
Trigger: ACCCATCCCGGCACAGCACCACTTCTCTTCTGGGAT...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCAGGAGTCCTGGGGCCTaGGGTGGGAAGAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSRSPGA*GGKRCG
Trigger: TCCACATCTCTTCCCACCCCAGGCCCCAGGACTCCT...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGGTGAAGGCACCAGGTaGGGACTAGGGGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQGEGTR*GLGVDW
Trigger: CCAGTCCACCCCTAGTCCCCACCTGGTGCCTTCACC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGAGCGGGCAATGGCGATaGAACGGCCTCGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKSGQWR*NGLGHH
Trigger: ATGATGCCCGAGGCCGTTCCATCGCCATTGCCCGCT...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGAGCGCAGCAAGTTGCTaGGGCTGTCGGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQSAASC*GCRAGL
Trigger: TAGGCCTGCCCGACAGCCCCAGCAACTTGCTGCGCT...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTGTGCGTGCACCTCCTaGATGAAGCGCAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLCACTS*MKRSKL
Trigger: CAACTTGCTGCGCTTCATCCAGGAGGTGCACGCACA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGGCCAAGGGTTTGCATaGAGGAGGCACACCATGGCG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRGQGFA*RRHTMA
Trigger: CGCCATGGTGTGCCTCCTCCATGCAAACCCTTGGCC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGGGCGGGGAGGAAGATaGGATTGGGGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRGRGGR*DWGRLW
Trigger: CCAGAGTCTACCCCAATCCCATCTTCCTCCCCGCCC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCACAGCTGGCTGGAAGTaGAAGTCACCGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSTAGWK*KSPASF
Trigger: GAAGGAGGCCGGTGACTTTCACTTCCAGCCAGCTGT...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGTCCAGGAGGCACTCCTaGGCCTGGCCCAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQSRRHS*AWPSMR
Trigger: CCTCATGCTGGGCCAGGCTCAGGAGTGCCTCCTGGA...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCTACCACCTGTGCACTaGTGCGGGCCACCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQLPPVH*CGPPES
Trigger: GCTTTCTGGTGGCCCGCATCAGTGCACAGGTGGTAG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGATCCGTGAACACACCTaGCAGCACTTGCATGGACTG +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLIREHT*QHLHGL
Trigger: CAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGAT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAAGCCTCCACATCCGTaGACACACCTGACAGCACTT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLKPPHP*THLTAL
Trigger: AAGTGCTGTCAGGTGTGTTCACGGATGTGGAGGCTT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGAAGCCTCCACATCCGTaGACACACCTGACAGCACTT +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRKPPHP*THLTAL
Trigger: AAGTGCTGTCAGGTGTGTTCACGGATGTGGAGGCTT...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTGTGCCGGTTCTTCAGTaGGTAGCAGCGGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFVPVLQ*VAAGNG
Trigger: GCCATTGCCCGCTGCTACTCACTGAAGAACCGGCAC...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGTAGTCATCCTTGCCTaGGCGCAGCACCACACGGTT +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSVVILA*AQHHTV
Trigger: AACCGTGTGGTGCTGCGCTCAGGCAAGGATGACTAC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGCACAAGAGAGCGCTTaGGGCTCTGGTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSAQESA*GSGLGT
Trigger: AGTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGGTCCTGGGAGTCCTaGGGAAGGTGGTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRRSWES*GRWFFW
Trigger: CCAGAAGAACCACCTTCCTCAGGACTCCCAGGACCT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGCTGGCCGAGGTACTTaGGGAGGACACTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQAGRGT*GGHYSP
Trigger: AGGGCTGTAGTGTCCTCCGCAAGTACCTCGGCCAGC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265562.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCATGGGCCACAGACTTaGCTGAGAAGATCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAHGPQT*LRRSLS
Trigger: GGACAGAGATCTTCTCAGGCAAGTCTGTGGCCCATG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTAAGCGAAGCGCGTCTTaGACAGTGTCAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCKRSAS*TVSGWP
Trigger: GGGCCAGCCTGACACTGTGCAAGACGCGCTTCGCTT...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGTGGGCGGCCAGGTTCTaGTCCAGGTACACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQWAARF*SRYTFS
Trigger: GCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCA...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGTTGGCCTCTGTCAGTaGACAGAGGACACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSVGLCQ*TEDTVL
Trigger: CAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAAC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACCAGAAGAGAAGTGGTaGTGTGCCGGGATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRPEEKW*CAGMGC
Trigger: GCAACCCATCCCGGCACAGCACCACTTCTCTTCTGG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACAAGGCTCAGGGCACCGTaGACCATGGGCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTRLRAP*TMGWPL
Trigger: GAGGGGCCAGCCCATGGTGCACGGTGCCCTGAGCCT...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTAGCATGTGCTTTCTCTaGTGCCGCATGCGCCGCACC +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCSMCFL*CRMRRT
Trigger: GGTGCGGCGCATGCGGCAGCAGAGAAAGCACATGCT...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCACGTGTCTCACCACTaGCTCATAGCAGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRHVSHH*LIAEPE
Trigger: CTCAGGTTCTGCTATGAGGCAGTGGTGAGACACGTG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCAGCTGCGCACTGGAAATaGGTACAGGAGACCTTCATG +
Preference number: 4 (lower is better)
Translates to: PAATAAASQDAHRGPAQSAAHWK*VQETFM
Trigger: CATGAAGGTCTCCTGTACCCATTTCCAGTGCGCAGC...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTTGTCCAGGGCGCTCTaGAAGTATGCAACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSLSRAL*KYATRS
Trigger: GGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGTCTGTGGGGTTCACTaGCAAGGGCTTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSVCGVH*QGLHQG
Trigger: CCCTTGGTGAAGCCCTTGCCAGTGAACCCCACAGAC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GTGGGATGTGGCTGTAGGCATCAAGGTTGTCCACCGTCTCGGGATCCAACTGCAAGGGCCTGTAACAGCTaGGTCTGTGGGGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: VGCGCRHQGCPPSRDPTARACNS*VCGVHW
Trigger: CCAGTGAACCCCACAGACCCAGCTGTTACAGGCCCT...TGCAGTTGGATCCCGAGACGGTGGACAACCTTGATGCCTACAGCCACATCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCCATGGGTACCAGTTTaGCAAAGATGTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAPWVPV*QRCQGL
Trigger: CAGGCCCTGACATCTTTGCCAAACTGGTACCCATGG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGACTTCCATGTACTTaGCCCATTCTCGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLGLPCT*PILASP
Trigger: AGGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGCGACGTGCAGGTTCATaGCACGGTGCAGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKRRAGS*HGAAHC
Trigger: ACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCG...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGAAAGTGGAGCGGGGTaGCACTTCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRESGAG*HFPGRC
Trigger: ACACCTTCCTGGGAAGTGCCACCCCGCTCCACTTTC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGATGCTATCTACTGTGGTaGTGGCTGGCCGAACCGCCA +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRCYLLW*WLAEPP
Trigger: TGGCGGTTCGGCCAGCCACCACCACAGTAGATAGCA...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGTGCTATCTACTGTGGTaGTGGCTGGCCGAACCGCCA +
Preference number: 4 (lower is better)
Translates to: IELVQGALEVCNPLPELLCYLLW*WLAEPP
Trigger: TGGCGGTTCGGCCAGCCACCACCACAGTAGATAGCA...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAAGAGATGTGGATGCTaGAGTGGAAGGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLKRCGC*SGRGCC
Trigger: ACAGCAGCCCCTTCCACTCCAGCATCCACATCTCTT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTTCCTGGGGCCTGGGGTaGGAAGAGATGTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCSWGLG*EEMWML
Trigger: CAGCATCCACATCTCTTCCCACCCCAGGCCCCAGGA...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGAGCGGGCAATGGCGATaGAACGGCCTCGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQSGQWR*NGLGHH
Trigger: ATGATGCCCGAGGCCGTTCCATCGCCATTGCCCGCT...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTGAGCGCTTGAGGCTCTaGTCTCGGAACTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFERLRL*SRNCRL
Trigger: GAGCCTGCAGTTCCGAGACCAGAGCCTCAAGCGCTC...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCAAGCCCTTGCCCGTTATaGGCCTGCAGAAAGTTATGC +
Preference number: 4 (lower is better)
Translates to: PAATAAASQDAHRGPAQSSPCPL*ACRKLC
Trigger: GCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCT...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp AGTGACGAGGCCTCGTGGGCAGCCATGGGTACCAGTTaGGCAAAGATGTCAGGGCCTGTAACAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SDEASWAAMGTS*AKMSGPVTAGS
Trigger: AGACCCAGCTGTTACAGGCCCTGACATCTTTGCCAAACTGGTACCCATGGCTGCCCACGAGGCCTCGTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGACAGCTGGCTGGAAGTaGAAGTCACCGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQTAGWK*KSPASF
Trigger: GAAGGAGGCCGGTGACTTTCACTTCCAGCCAGCTGT...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGACAGCATTCTGTCTaGGCAACTCCAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAGQHSV*ATPASS
Trigger: TGAAGAAGCTGGAGTTGCTCAGACAGAATGCTGTCC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265562.5
CDS-3UTR TCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGGGATCCAACTGCATTaGATCCATGAACTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRGIQLH*IHELVQ
Trigger: CTGGACCAGTTCATGGATTCAATGCAGTTGGATCCC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCAACTTCTTCATCTCTaGGTGGTCTGTGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAQLLHL*VVCGDQ
Trigger: CTGGTCACCACAGACCACTCAGAGATGAAGAAGTTG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTCCACCCCCAGGAGACTaGGTGCCGCCATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFPPPGD*VPPCWL
Trigger: GAGCCAGCATGGCGGCACTCAGTCTCCTGGGGGTGG...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp ATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGCATGGGCCACAGACTTaGCTGAGAAGATCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: MASLSLSRALWKYATRSPHGPQT*LRRSLS
Trigger: GGACAGAGATCTTCTCAGGCAAGTCTGTGGCCCATG...CGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTCTGAAGAGTGTCCAATaGTGGGACAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQALKSVQ*WDSLMV
Trigger: TACCATGAGGCTGTCCCAGCATTGGACACTCTTCAG...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGTTGGCCTCTGTCAGTaGACAGAGGACACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCVGLCQ*TEDTVL
Trigger: CAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAAC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCAAGTCCCTGCCCTCCTaGGACTTCTTCATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSKSLPS*DFFIRS
Trigger: GGACCTGATGAAGAAGTCGCAGGAGGGCAGGGACTT...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGAAGTCCCTGCCCTCCTaGGACTTCTTCATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: IELVQGALEVCNPLPELLKSLPS*DFFIRS
Trigger: GGACCTGATGAAGAAGTCGCAGGAGGGCAGGGACTT...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGGCAGAGCAGCCACCTTaGTCTCCAGATCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKAEQPP*SPDLRR
Trigger: TCTACGCAGATCTGGAGAGCAAGGTGGCTGCTCTGC...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCAGAGAAGTGGTGCTGTaGCGGGATGGGTTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSREVVL*RDGLLS
Trigger: GCTAAGCAACCCATCCCGGCACAGCACCACTTCTCT...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACACCCCAGGAGACTGAGTaGCGCCATGCTGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTPQETE*RHAGSP
Trigger: CGGAGAGCCAGCATGGCGGCACTCAGTCTCCTGGGG...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCGGGCATCATGTTCCTaGGCATCTTGCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQRASCS*ASCSSR
Trigger: GCGAGAGCTGCAAGATGCGCAGGAACATGATGCCCG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGTGGGGAAGTAGCGTaGCACTTTTTGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLGGEVA*HFLLLH
Trigger: ATGGAGAAGCAAAAAGTGGCACGCTACTTCCCCACC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCCACATGGGTTTCGGTaGTGCGGACGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFPHGFR*CGRCSM
Trigger: CATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGG...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACCTGATGCAGGTAATGTaGGTGCACCTCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYLMQVM*VHLLDE
Trigger: TTCATCCAGGAGGTGCACGCACATTACCTGCATCAG...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGACACCAGAGCTGCAGTaGACAATGATGGGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKTPELQ*TMMGVC
Trigger: GCACACGCCCATCATTGTGCACTGCAGCTCTGGTGT...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGCAGAAAGTTATGCTTaGTCATCCGCTGTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRAESYA*SSAVCP
Trigger: GGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTGCCCGTTATGGGCCTaGAGAAAGTTATGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLCPLWA*RKLCLL
Trigger: GAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTATGCCCGTTATGGGCCTaGAGAAAGTTATGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVCPLWA*RKLCLL
Trigger: GAGCAAGCATAACTTTCTGCAGGCCCATAACGGGCA...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACAAGCTGCTGCAGCTGCTaGCTCAGCCACGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTSCCSC*LSHEPS
Trigger: GCTGGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCT...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTACTTGATGTCCTCATaGGCCACAGACTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAYLMSS*ATDLPE
Trigger: CTCAGGCAAGTCTGTGGCCCATGAGGACATCAAGTA...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGCCATGGCCCCCAGCATaGAGTGCAGCGCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQPWPPA*SAALQG
Trigger: ACCTTGGAGCGCTGCACTCCATGCTGGGGGCCATGG...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGATTGAGCGTAAGGATCTaGCGGCTCATGTCGACGCTG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRLSVRI*RLMSTL
Trigger: CAGCGTCGACATGAGCCGCCAGATCCTTACGCTCAA...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GTGGGATGTGGCTGTAGGCATCAAGGTTGTCCACCGTCTCGGGATCCAACTGCATGCACAGTGTCAGGCTaGCCCTTGGCCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: VGCGCRHQGCPPSRDPTACTVSG*PLANLM
Trigger: CATCAAGTTGGCCAAGGGCCAGCCTGACACTGTGCA...TGCAGTTGGATCCCGAGACGGTGGACAACCTTGATGCCTACAGCCACATCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTAGGGCCTGTAACAGCTaGGTCTGTGGGGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCRACNS*VCGVHW
Trigger: CCAGTGAACCCCACAGACCCAGCTGTTACAGGCCCT...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACCTCGTGGGCAGCCATaGGTACCAGTTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRPRGQP*VPVWQR
Trigger: TCTTTGCCAAACTGGTACCCATGGCTGCCCACGAGG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CGTGGAGTTCCACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTATCTTGTCCTCAATCTTaGCCATCATCTCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RGVPLLVQVAEYPPHGCVSCPQS*PSSPGA
Trigger: TGCTCCGGGAGATGATGGCCAAGATTGAGGACAAGA...TACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCTCCATGAGCTGGGGTaGGATGTGGCTGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQLHELG*DVAVGI
Trigger: GATGCCTACAGCCACATCCCACCCCAGCTCATGGAG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGAAGGAGGCCTTCTCATaGACTTCCATGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRKEAFS*TSMYLA
Trigger: GGCCAAGTACATGGAAGTCCATGAGAAGGCCTCCTT...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTGGAGTTCCACTTTTaGTCCAAGTCGCTGAGTACC +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAVEFHF*SKSLST
Trigger: GGTACTCAGCGACTTGGACCAAAAGTGGAACTCCAC...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGAAAGTGGAGCGGGGTaGCACTTCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQESGAG*HFPGRC
Trigger: ACACCTTCCTGGGAAGTGCCACCCCGCTCCACTTTC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGGATGCTATCTACTGTaGTGGTGGCTGGCCGAACCG +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQGCYLL*WWLAEP
Trigger: CGGTTCGGCCAGCCACCACCACAGTAGATAGCATCC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCTGGGGATGGGCGCCTaGATGCTATCTACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQLGMGA*MLSTVV
Trigger: CACCACAGTAGATAGCATCCAGGCGCCCATCCCCAG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTGTGGGGCTGTGTGGCTaGGGATGGGCGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFVGLCG*GWAPGC
Trigger: GCATCCAGGCGCCCATCCCCAGCCACACAGCCCCAC...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGGTAAGAGGGGCTGCCTaGGGGCCCATGGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVVRGAA*GPMGLV
Trigger: TACCAGACCCATGGGCCCCCAGGCAGCCCCTCTTAC...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGATGTGCGTGCACCTCCTaGATGAAGCGCAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRCACTS*MKRSKL
Trigger: CAACTTGCTGCGCTTCATCCAGGAGGTGCACGCACA...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTTGGCAATGGTGGCCTaGATGGAGCTGATGGGCACA +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSLAMVA*MELMGT
Trigger: TGTGCCCATCAGCTCCATCCAGGCCACCATTGCCAA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACAGGGGGCTTCAGGCACTaGCGGCTCCTCCTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTGGFRH*RLLLRL
Trigger: CAGCCTAAGGAGGAGCCGCCAGTGCCTGAAGCCCCC...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGTTGAGTGTCCAGAGTaGATCCAGAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRVECPE*IQKAEG
Trigger: CCCCTCAGCCTTCTGGATCCACTCTGGACACTCAAC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
3UTR CAA 72 bp GTGTCAGGCTGGCCCTTGGCCAACTTGATGGCTTCATaGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACC +
Preference number: 4 (lower is better)
Translates to: VSGWPLANLMAS*SLSRALWKYAT
Trigger: GGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCAGCCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp TTGGTGAAGGAGGCCTTCTCATGGACTTCCATGTACTaGGCCCATTCTCGCCTCACCTCTGCCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LVKEAFSWTSMY*AHSRLTSASSA
Trigger: GGCTGAGCTGGCAGAGGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCCATGAGAAGGCCTCCTTCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCAGCCTCATGGTAAATaGAGTCGTTGTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRQPHGK*SRCPSW
Trigger: CCAAGAAGGACAACGACTTCATTTACCATGAGGCTG...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACCTCCAACAGATCTCTaGTGTCCTTCAGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRPPTDL*CPSGKP
Trigger: AGGCTTCCCTGAAGGACATCAGAGATCTGTTGGAGG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGCAGCTCACTGTTGGTaGAGGAGGCCTTCTCATGGA +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCAAHCW*RRPSHG
Trigger: TCCATGAGAAGGCCTCCTTCACCAACAGTGAGCTGC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTACTGTCATAGGGCATaGCATCCTGGTGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSYCHRA*HPGAGS
Trigger: AGAACCGGCACCAGGATGTCATGCCCTATGACAGTA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTCCACGCAGCTGGCATTaGTGTAGTCATCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCPRSWH*CSHPCL
Trigger: CAGGCAAGGATGACTACATCAATGCCAGCTGCGTGG...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACAGGCGAAGGCGCCGGCTaGGCACTGGAAATGGGTACA +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTGEGAG*ALEMGT
Trigger: TGTACCCATTTCCAGTGCGCAGCCGGCGCCTTCGCC...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp ACACGGTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACCAGATGAGCCACGGCTaGGAAGTAGTAGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: TRSWAARFCSRYTFSWSYQMSHG*EVVDLH
Trigger: ATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTG...GTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGACCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCAGGTTCATGGCACGGTaGAGCTCACTGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSRFMAR*SSLLVK
Trigger: CTTCACCAACAGTGAGCTGCACCGTGCCATGAACCT...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTTACCCGCCGCACGGCTaGGTACTGCACGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFYPPHG*VLHVGL
Trigger: GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTA...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTCTGCGTAGAAGTCCCTaGCCTCCTGCGACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCLRRSP*PPATSS
Trigger: TGAAGAAGTCGCAGGAGGGCAGGGACTTCTACGCAG...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGCAGAGCAGCCACCTTaGTCTCCAGATCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCAEQPP*SPDLRR
Trigger: TCTACGCAGATCTGGAGAGCAAGGTGGCTGCTCTGC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTTGTTCCTGCGCATCTTaGAGCTCTCGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCCSCAS*SSRQTV
Trigger: CACTGTCTGGCGAGAGCTGCAAGATGCGCAGGAACA...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGATGTGCTTTCTCTGCTaGCGCATGCGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVMCFLC*RMRRTS
Trigger: GCTGGTGCGGCGCATGCGGCAGCAGAGAAAGCACAT...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGCCTGCAGAAAGTTATaGTTGCTCATCCGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRACRKL*LLIRCL
Trigger: CAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTGGTCCAGCCAGATCATaGGCATGCGGGGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFGPARS*ACGARP
Trigger: AGGCCGTGCCCCGCATGCCCATGATCTGGCTGGACC...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTTTCTTCCAGTCCTTCTaGATCCGGCCCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCFFQSF*IRPSSE
Trigger: CTCACTGCTGGGCCGGATCCAGAAGGACTGGAAGAA...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGGGACTTCCATGTACTTaGCCCATTCTCGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: WPLANLMASLSLSRALWKGLPCT*PILASP
Trigger: AGGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCC...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCCAGGGTCTGCAGCGTaGAGTTCCACTTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQPGSAA*SSTFGP
Trigger: TGGACCAAAAGTGGAACTCCACGCTGCAGACCCTGG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTTGTGTAGGCAGGGGCTaGGTAGAGGGCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFCVGRG*VEGRPR
Trigger: CCTGGGCCTGCCCTCTACCCAGCCCCTGCCTACACA...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGTACTGTGGTGGTGGCTaGCCGAACCGCCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQYCGGG*PNRHGQ
Trigger: TTGGCCATGGCGGTTCGGCCAGCCACCACCACAGTA...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAAGAGATGTGGATGCTaGAGTGGAAGGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRKRCGC*SGRGCC
Trigger: ACAGCAGCCCCTTCCACTCCAGCATCCACATCTCTT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGGAAGGTGGTTCTTCTaGCTGATGCTTGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQGRWFF*LMLALA
Trigger: GGCCAGTGCAAGCATCAGCCAGAAGAACCACCTTCC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTGTTGAGTGTCCAGAGTaGATCCAGAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFVECPE*IQKAEG
Trigger: CCCCTCAGCCTTCTGGATCCACTCTGGACACTCAAC...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
3UTR CAA 72 bp TCCCCCAATGACATCCATAGTGAAGCGAAGCGCGTCTaGCACAGTGTCAGGCTGGCCCTTGGCCAACTTGAT +
Preference number: 4 (lower is better)
Translates to: SPNDIHSEAKRV*HSVRLALGQLD
Trigger: ATCAAGTTGGCCAAGGGCCAGCCTGACACTGTGCAAGACGCGCTTCGCTTCACTATGGATGTCATTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGCTCCTTTTACAGGCTaGAGAGTGTCCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCAPFTG*RVSNAG
Trigger: CCCAGCATTGGACACTCTTCAGCCTGTAAAAGGAGC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCTCCAAGGCCCGGCATaGCTCCTTGTAGTAATCTAC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQLQGPA*LLVVIY
Trigger: GTAGATTACTACAAGGAGGCATGCCGGGCCTTGGAG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACATCCCCGAACTTCTGCTaGTCCTCGGCCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTSPNFC*SSACFP
Trigger: GGGAAAGCAGGCCGAGGAGCAGCAGAAGTTCGGGGA...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACTGAAGAGTGTCCAATaGTGGGACAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRLKSVQ*WDSLMV
Trigger: TACCATGAGGCTGTCCCAGCATTGGACACTCTTCAG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp ATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGACACCTGACAGCACTTaGATGGACTGTACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: MASLSLSRALWKYATRSPTPDST*MDCTRF
Trigger: GAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGT...CGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGAGGTTCATGGCACGGTaGAGCTCACTGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQRFMAR*SSLLVK
Trigger: CTTCACCAACAGTGAGCTGCACCGTGCCATGAACCT...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGGAGGCCACCAGGGTCTaGAGCGTGGAGTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVEATRV*SVEFHF
Trigger: AAAGTGGAACTCCACGCTGCAGACCCTGGTGGCCTC...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGCCAGAAGAGAAGTGGTaGTGTGCCGGGATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQPEEKW*CAGMGC
Trigger: GCAACCCATCCCGGCACAGCACCACTTCTCTTCTGG...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGGTGGGGAAGTAGCGTaGCACTTTTTGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSGGEVA*HFLLLH
Trigger: ATGGAGAAGCAAAAAGTGGCACGCTACTTCCCCACC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCTTCTGGCTGATGCTTaGACTGGCCAAGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQLLADA*TGQGFA
Trigger: TGCAAACCCTTGGCCAGTGCAAGCATCAGCCAGAAG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTACTTGATGTCCTCATaGGCCACAGACTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSYLMSS*ATDLPE
Trigger: CTCAGGCAAGTCTGTGGCCCATGAGGACATCAAGTA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGAGTCGTTGTCCTTCTTaGCAGAATTGTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRSRCPS*QNCTFP
Trigger: GGGGAAAGTACAATTCTGCCAAGAAGGACAACGACT...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAAGAGTGTCCAATGCTaGGACAGCCTCATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLKSVQC*DSLMVN
Trigger: ATTTACCATGAGGCTGTCCCAGCATTGGACACTCTT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACAAGTGACGAGGCCTCGTaGGCAGCCATGGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTSDEAS*AAMGTS
Trigger: ACTGGTACCCATGGCTGCCCACGAGGCCTCGTCACT...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTTGTCCTCAATCTTaGCCATCATCTCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSSCPQS*PSSPGA
Trigger: TGCTCCGGGAGATGATGGCCAAGATTGAGGACAAGA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTAGCCCTTGCCCGTTATaGGCCTGCAGAAAGTTATGC +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCSPCPL*ACRKLC
Trigger: GCATAACTTTCTGCAGGCCCATAACGGGCAAGGGCT...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
3UTR CAA 72 bp ATGAACTGGTCCAGGACCTCATTCTTGTCCTCAATCTaGGCCATCATCTCCCGGAGCAGCTTGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MNWSRTSFLSSI*AIISRSSLAFS
Trigger: GGAGAAGGCCAAGCTGCTCCGGGAGATGATGGCCAAGATTGAGGACAAGAATGAGGTCCTGGACCAGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGGCAGCTCACTGTTGGTaGAGGAGGCCTTCTCATGGA +
Preference number: 4 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVAAHCW*RRPSHG
Trigger: TCCATGAGAAGGCCTCCTTCACCAACAGTGAGCTGC...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTCAATAGCAAAGAGCTaGAAAATGTCGGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQASIAKS*KMSGPI
Trigger: TATGGGACCCGACATTTTTCAGCTCTTTGCTATTGA...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGTCTCGGGATCCAACTaGATTGAATCCATGAACTGG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSVSGSN*IESMNW
Trigger: CCAGTTCATGGATTCAATGCAGTTGGATCCCGAGAC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGCTGCGTAGAAGTCCCTaGCCTCCTGCGACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVLRRSP*PPATSS
Trigger: TGAAGAAGTCGCAGGAGGGCAGGGACTTCTACGCAG...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGAGAGAAGTGGTGCTGTaGCGGGATGGGTTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQREVVL*RDGLLS
Trigger: GCTAAGCAACCCATCCCGGCACAGCACCACTTCTCT...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGCTGATGCAGGTAATGTaGGTGCACCTCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQLMQVM*VHLLDE
Trigger: TTCATCCAGGAGGTGCACGCACATTACCTGCATCAG...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGCCTGCAGAAAGTTATaGTTGCTCATCCGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSACRKL*LLIRCL
Trigger: CAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTATTGAATCCATGAACTaGTCCAGGACCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAIESMN*SRTSFL
Trigger: CAAGAATGAGGTCCTGGACCAGTTCATGGATTCAAT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTAAGGAGGCCTTCTCATaGACTTCCATGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFKEAFS*TSMYLA
Trigger: GGCCAAGTACATGGAAGTCCATGAGAAGGCCTCCTT...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCGTGATGTCATCTTTCTaGATAAGCTCACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSVMSSF*ISSRSC
Trigger: GCAGCTGCGTGAGCTTATCCAGAAAGATGACATCAC...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTGTGGAGTTCCACTTTTaGTCCAAGTCGCTGAGTACC +
Preference number: 4 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFVEFHF*SKSLST
Trigger: GGTACTCAGCGACTTGGACCAAAAGTGGAACTCCAC...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACATATCTACTGTGGTGGTaGCTGGCCGAACCGCCATGG +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTYLLWW*LAEPPW
Trigger: CCATGGCGGTTCGGCCAGCCACCACCACAGTAGATA...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACACTGGGGATGGGCGCCTaGATGCTATCTACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTLGMGA*MLSTVV
Trigger: CACCACAGTAGATAGCATCCAGGCGCCCATCCCCAG...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTGGCCAAGGGTTTGCATaGAGGAGGCACACCATGGCG +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFGQGFA*RRHTMA
Trigger: CGCCATGGTGTGCCTCCTCCATGCAAACCCTTGGCC...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGGGAAGGTGGTTCTTCTaGCTGATGCTTGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQGRWFF*LMLALA
Trigger: GGCCAGTGCAAGCATCAGCCAGAAGAACCACCTTCC...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGACACCTGACAGCACTTaGATGGACTGTACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQTPDST*MDCTRF
Trigger: GAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGT...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTCATACTTTTTCAGCTaGTCCTCGAACAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLSYFFS*SSNNFF
Trigger: GAAGAAGTTGTTCGAGGAGCAGCTGAAAAAGTATGA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTCATACTTTTTCAGCTaGTCCTCGAACAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRSYFFS*SSNNFF
Trigger: GAAGAAGTTGTTCGAGGAGCAGCTGAAAAAGTATGA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGAGTCGTTGTCCTTCTTaGCAGAATTGTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: IELVQGALEVCNPLPELLSRCPS*QNCTFP
Trigger: GGGGAAAGTACAATTCTGCCAAGAAGGACAACGACT...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTGTCTGTGGGGTTCACTaGCAAGGGCTTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFVCGVH*QGLHQG
Trigger: CCCTTGGTGAAGCCCTTGCCAGTGAACCCCACAGAC...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGCCATGGGTACCAGTTTaGCAAAGATGTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVPWVPV*QRCQGL
Trigger: CAGGCCCTGACATCTTTGCCAAACTGGTACCCATGG...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGCAACTTCTTCATCTCTaGGTGGTCTGTGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVQLLHL*VVCGDQ
Trigger: CTGGTCACCACAGACCACTCAGAGATGAAGAAGTTG...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTCTTGCTCTCCAGATCTaGGTAGAAGTCCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFLALQI*VEVPAL
Trigger: GAGGGCAGGGACTTCTACGCAGATCTGGAGAGCAAG...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGAAACTTCTTCACAGCTaGCTGGAAGTGAAAGTCACC +
Preference number: 4 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQKLLHS*LEVKVT
Trigger: GGTGACTTTCACTTCCAGCCAGCTGTGAAGAAGTTT...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTTCATTGTAGGCTTCTaGGTTCTCTCCATAATTCTT +
Preference number: 4 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRFIVGF*VLSIIL
Trigger: AAGAATTATGGAGAGAACCCAGAAGCCTACAATGAA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTTCATTGTAGGCTTCTaGGTTCTCTCCATAATTCTT +
Preference number: 4 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAFIVGF*VLSIIL
Trigger: AAGAATTATGGAGAGAACCCAGAAGCCTACAATGAA...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTAAGAGTGTCCAATGCTaGGACAGCCTCATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCKSVQC*DSLMVN
Trigger: ATTTACCATGAGGCTGTCCCAGCATTGGACACTCTT...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGGGGAGACCTGCAACTaGTGGGGCCGGCCCTACCCC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEGETCN*WGRPYP
Trigger: GGGGTAGGGCCGGCCCCACCAGTTGCAGGTCTCCCC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
3UTR CAA 72 bp TGCATTGAATCCATGAACTGGTCCAGGACCTCATTCTaGTCCTCAATCTTGGCCATCATCTCCCGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CIESMNWSRTSF*SSILAIISRSS
Trigger: GCTGCTCCGGGAGATGATGGCCAAGATTGAGGACAAGAATGAGGTCCTGGACCAGTTCATGGATTCAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR TCA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGCAGCCTCATGGTAAATaGAGTCGTTGTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQQPHGK*SRCPSW
Trigger: CCAAGAAGGACAACGACTTCATTTACCATGAGGCTG...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACCTGGCCCGAGCCCATaGGGACCCGACTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEPGPSP*GPDSAG
Trigger: ACCTGCAGAGTCGGGTCCCCATGGGCTCGGGCCAGG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265562.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACACGGCCTTGTCCTCTaGGGAGAGGGCCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEHGLVL*GEGRCG
Trigger: CCCACACCGGCCCTCTCCCCAGAGGACAAGGCCGTG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGAGACCTGCAACTGGTaGGGCCGGCCCTACCCCCAC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEETCNW*GRPYPH
Trigger: GTGGGGGTAGGGCCGGCCCCACCAGTTGCAGGTCTC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGAAAGGCAGAGCCCCTaGGTGGGCTGGCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEERQSP*VGWQRV
Trigger: GACCCTCTGCCAGCCCACTCAGGGGCTCTGCCTTTC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTATGCGCTTTAGGTTTTaGAGCACGGCCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFMRFRF*STALSS
Trigger: AGAGGACAAGGCCGTGCTGCAAAACCTAAAGCGCAT...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGTGCAAAGGCTCCCGTaGGGCCCACACCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEVQRLP*GPHQSC
Trigger: GCAGCTCTGGTGTGGGCCGCACGGGAGCCTTTGCAC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAATGGGGCTGTGGGCCGTaGCGGCGGCTTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEWGCGP*RRLLLQ
Trigger: CTGAAGAAGAAGCCGCCGCCACGGCCCACAGCCCCA...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGGTAGGTGTAAGGCGTaGGCAGTGGCTGCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEGRCKA*AVAAVG
Trigger: CCCCACCGCAGCCACTGCCCACGCCTTACACCTACC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTGTCTCGGGATCCAACTaGATTGAATCCATGAACTGG +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFVSGSN*IESMNW
Trigger: CCAGTTCATGGATTCAATGCAGTTGGATCCCGAGAC...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGCCTCCAGCTCCTGCTaGAACTGCCGCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEASSSC*NCRSLS
Trigger: TGAGAGGCTGCGGCAGTTGCAGCAGGAGCTGGAGGC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACTCTGGTCTCGGAACTaGAGGCTCAGCACGCGCTCC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAELWSRN*RLSTRS
Trigger: GGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCAGAG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAATGCTCATCCGCTGTTTaGCCCGCAGGGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAECSSAV*PAGSCP
Trigger: TGGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCA...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAAGTGACGAGGCCTCGTaGGCAGCCATGGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAESDEAS*AAMGTS
Trigger: ACTGGTACCCATGGCTGCCCACGAGGCCTCGTCACT...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAAGGCCTGCTCGTACTTaGTGTCCTCATGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAERPART*CPHGPQ
Trigger: CTGTGGCCCATGAGGACATCAAGTACGAGCAGGCCT...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGGGTTGCTTAGCCCCTaGAGGGTAGGTGTAAGGCGT +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEGLLSP*RVGVRR
Trigger: ACGCCTTACACCTACCCTGCAGGGGCTAAGCAACCC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGGGAAGAGATGTGGATaGTGGAGTGGAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEGKRCG*WSGRGC
Trigger: GCAGCCCCTTCCACTCCAGCATCCACATCTCTTCCC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACCACATGGGTTTCGGTaGTGCGGACGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEPHGFR*CGRCSM
Trigger: CATTGAGCAGCGTCCGCAGCACCGAAACCCATGTGG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTATTGAATCCATGAACTaGTCCAGGACCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFIESMN*SRTSFL
Trigger: CAAGAATGAGGTCCTGGACCAGTTCATGGATTCAAT...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACTCCATGAGCTGGGGTaGGATGTGGCTGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAELHELG*DVAVGI
Trigger: GATGCCTACAGCCACATCCCACCCCAGCTCATGGAG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACGACGTGCAGGTTCATaGCACGGTGCAGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAERRAGS*HGAAHC
Trigger: ACAGTGAGCTGCACCGTGCCATGAACCTGCACGTCG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGGCCACAGACTTGCCTaGGAAGATCTCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEGHRLA*EDLCPG
Trigger: ACCTGGACAGAGATCTTCTCAGGCAAGTCTGTGGCC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265562.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAACACCAGAGCTGCAGTaGACAATGATGGGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAETPELQ*TMMGVC
Trigger: GCACACGCCCATCATTGTGCACTGCAGCTCTGGTGT...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGCCCTCAAAGTCTCGTaGGACACGGACAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEALKVS*DTDSIL
Trigger: CAGAATGCTGTCCGTGTCCCACGAGACTTTGAGGGC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265562.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACTGCGTACTGCACGTTaGCCTCTGTCAGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAELRTAR*PLSVHR
Trigger: TCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGCTGCGCACTGGAAATaGGTACAGGAGACCTTCATG +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEAAHWK*VQETFM
Trigger: CATGAAGGTCTCCTGTACCCATTTCCAGTGCGCAGC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGGGATCCAACTGCATTaGATCCATGAACTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEGIQLH*IHELVQ
Trigger: CTGGACCAGTTCATGGATTCAATGCAGTTGGATCCC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACTGTTCAGGTCTTGTTaGGTGTCCAGAGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAELFRSC*VSRVDP
Trigger: TGGATCCACTCTGGACACTCAACAAGACCTGAACAG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAATGCGCTTTAGGTTTTaGAGCACGGCCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEMRFRF*STALSS
Trigger: AGAGGACAAGGCCGTGCTGCAAAACCTAAAGCGCAT...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR GCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACAGATGAGCCACGGCTaGGAAGTAGTAGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEQMSHG*EVVDLH
Trigger: ATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAAGGTACACCTTCAGCTaGTCATACTTTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAERYTFS*SYFFSC
Trigger: GCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCT...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR TCA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAATCAATAGCAAAGAGCTaGAAAATGTCGGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: YYFNSKELKNVGSHKGAESIAKS*KMSGPI
Trigger: TATGGGACCCGACATTTTTCAGCTCTTTGCTATTGA...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS CCA 90 bp CCTTCAGGTCCAGCCAGATCATGGGCATGCGGGGCACGGCCTCCATaGCGGCTGGCACCCGCCGGCCACCCGGCCACTCCCGTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PSGPARSWACGARPP*RLAPAGHPATPVAA
Trigger: AGCAGCTACGGGAGTGGCCGGGTGGCCGGCGGGTGCCAGCCGCCATGGAGGCCGTGCCCCGCATGCCCATGATCTGGCTGGACCTGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265562.5
ENST00000456221.5
ENST00000602307.5
ENST00000683323.1
CDS-3UTR CAA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGGGGCAGCAGCGGCTTaGGGGCTGTGGGCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRGAAAA*GLWAVA
Trigger: CGCCACGGCCCACAGCCCCAAAGCCGCTGCTGCCCC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGCAGGTGCTACGGGCATaGCATGGGGCCCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRQVLRA*HGALGP
Trigger: GGGCCCCAGGGCCCCATGCAATGCCCGTAGCACCTG...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGGGCTGGCAGAGGGTCTaGAGCGGGACCTGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRGWQRV*SGTWVE
Trigger: CTCTACCCAGGTCCCGCTCAAGACCCTCTGCCAGCC...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS CCA 90 bp AGGCTTCATACGAGGCCACCAGGGTCTGCAGCGTGGAGTTCCACCTaGTGGGCAGAAGGGCCAGCTCCAGGTGAACCATGGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RLHTRPPGSAAWSST*WAEGPAPGEPWGWA
Trigger: AGCCCAGCCCCATGGTTCACCTGGAGCTGGCCCTTCTGCCCACCAGGTGGAACTCCACGCTGCAGACCCTGGTGGCCTCGTATGAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495653.1
CDS-3UTR CAA 90 bp TTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTGCACGTTGGCCTCTTTTGCAGCACGGCCTaGTCCTCTGGGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LVQVAEYPPHGCVLHVGLFCSTA*SSGERA
Trigger: GGCCCTCTCCCCAGAGGACAAGGCCGTGCTGCAAAA...GAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGGGGCAGCAGCGGCTTaGGGGCTGTGGGCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQGAAAA*GLWAVA
Trigger: CGCCACGGCCCACAGCCCCAAAGCCGCTGCTGCCCC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS GCA 90 bp GACTTTTGGTCCAAGTCGCTGAGTACCCGCCGCACGGCTGCGTACTaGACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: DFWSKSLSTRRTAAY*TLASVSAQRTRSWA
Trigger: CGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495653.1
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGGCTGGCAGAGGGTCTaGAGCGGGACCTGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLGWQRV*SGTWVE
Trigger: CTCTACCCAGGTCCCGCTCAAGACCCTCTGCCAGCC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTCCTCAGACACCCGCTaGTCCATGGCCCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLSSDTR*SMAPSM
Trigger: CATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGGAAGCGAAGCGCGTCTaGCACAGTGTCAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLEAKRV*HSVRLA
Trigger: GGCCAGCCTGACACTGTGCAAGACGCGCTTCGCTTC...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCTGAGCAGGCGCAGGTaGCCGACGTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLLSRRR*PTCRFM
Trigger: CATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAG...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTTTTGCAGCACGGCCTaGTCCTCTGGGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRFCSTA*SSGERA
Trigger: GGCCCTCTCCCCAGAGGACAAGGCCGTGCTGCAAAA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCTGTGCCGGGATGGGTaGCTTAGCCCCTGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLLCRDG*LSPCRV
Trigger: TACCCTGCAGGGGCTAAGCAACCCATCCCGGCACAG...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGTGCACAAGAGAGCGCTaGAGGCTCTGGTCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRCTRER*RLWSRN
Trigger: GTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCA...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTTGCTCATCCGCTGTTaGCCCCGCAGGGAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLLLIRC*PRRELS
Trigger: GGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCAA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS GCA 90 bp GGGCGCTCTGGAAGTATGCAACCTGTGGAGGGTGGCAGGAAAGCCTaGTCTGTCCTCCTCTGCTTGGACCCTTTCTCCTCCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: GRSGSMQPVEGGRKA*SVLLCLDPFSSCLP
Trigger: TGGGAGGCAGGAGGAGAAAGGGTCCAAGCAGAGGAGGACAGAGCAGGCTTTCCTGCCACCCTCCACAGGTTGCATACTTCCAGAGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS-3UTR CAA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCAGCTGCGTACTGCACGTaGGCCTCTGTCAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: PAATAAASQDAHRGPAQSAAYCT*ASVSAQ
Trigger: CTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGC...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS GCA 90 bp CCATGGGGACCCGACTCTGCAGGTAATGAAGCTGGCCGAGGTACTTaGGGAGGACACTACAGCCCTCAAAGTCTCGTGGGACACGGACAG +
Preference number: 5 (lower is better)
Translates to: PWGPDSAGNEAGRGT*GGHYSPQSLVGHGQ
Trigger: CTGTCCGTGTCCCACGAGACTTTGAGGGCTGTAGTGTCCTCCGCAAGTACCTCGGCCAGCTTCATTACCTGCAGAGTCGGGTCCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265562.5
ENST00000456221.5
ENST00000683323.1
CDS GCA 90 bp GACCTCGGACCCCTACTACCAGGTCTGGCCTGGTCTCACAGAACATaGCCAGGGCACTGCTGGAAACAGTGGAACAGAAGGCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: DLGPLLPGLAWSHRT*PGHCWKQWNRRHLL
Trigger: GAGGAGGTGCCTTCTGTTCCACTGTTTCCAGCAGTGCCCTGGGCATGTTCTGTGAGACCAGGCCAGACCTGGTAGTAGGGGTCCGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS GCA 90 bp TCCCAGCAGCTTCCACGGAACCTTCCTCACCTTCTGGCTGATGCTTaGACTGGCCAAGGGTTTGCATGGAGGAGGCACACCATGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SQQLPRNLPHLLADA*TGQGFAWRRHTMAL
Trigger: CAGCGCCATGGTGTGCCTCCTCCATGCAAACCCTTGGCCAGTGCAAGCATCAGCCAGAAGGTGAGGAAGGTTCCGTGGAAGCTGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683708.1
CDS-3UTR CAA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTGGCCGAGGTACTaGCGGAGGACACTACAGCCC +
Preference number: 5 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRSWPRY*RRTLQP
Trigger: GGGCTGTAGTGTCCTCCGCAAGTACCTCGGCCAGCT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265562.5
CDS-3UTR CAA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGTCATGGGCCACAGACTaGCCTGAGAAGATCTCTGTC +
Preference number: 5 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLSWATD*PEKISV
Trigger: GACAGAGATCTTCTCAGGCAAGTCTGTGGCCCATGA...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCAGGCCTGCTCGTACTaGATGTCCTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLQACSY*MSSWAT
Trigger: TGTGGCCCATGAGGACATCAAGTACGAGCAGGCCTG...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGCGGTGCAGCTCACTGTaGGTGAAGGAGGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLRCSSL*VKEAFS
Trigger: TGAGAAGGCCTCCTTCACCAACAGTGAGCTGCACCG...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGACTGAGCAGGCGCAGGTaGCCGACGTGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRLSRRR*PTCRFM
Trigger: CATGAACCTGCACGTCGGCAACCTGCGCCTGCTCAG...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GATGGAGCTGATGGGCACATCCCCACCGAGGACCAGGTCCTGGGAGTCCTGAGGCGTGGAGTTCCACTTTaGGTCCAAGTCGCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: DGADGHIPTEDQVLGVLRRGVPL*VQVAEY
Trigger: GTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG...CCTCAGGACTCCCAGGACCTGGTCCTCGGTGGGGATGTGCCCATCAGCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp TGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGCTGTGCCGGGATGGGTaGCTTAGCCCCTGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: WPLANLMASLSLSRALWKLCRDG*LSPCRV
Trigger: TACCCTGCAGGGGCTAAGCAACCCATCCCGGCACAG...CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp CACGTTGGCCTCTGTCAGTGCACAGAGGACACGGTCCTGGGCGGCCAGGTTCTGGTAGCGTGCCACTTTTaGCTTCTCCATCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HVGLCQCTEDTVLGGQVLVACHF*LLHLSL
Trigger: GAGGCTGAGATGGAGAAGCAAAAAGTGGCACGCTAC...CAGAACCTGGCCGCCCAGGACCGTGTCCTCTGTGCACTGACAGAGGCCAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTTGCACAAGAGAGCGCTaGAGGCTCTGGTCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQACTRER*RLWSRN
Trigger: GTTCCGAGACCAGAGCCTCAAGCGCTCTCTTGTGCA...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAATGAAGCGCAGCAAGTaGCTGGGGCTGTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRMKRSK*LGLSGR
Trigger: CCTGCCCGACAGCCCCAGCAACTTGCTGCGCTTCAT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGATGAAGCGCAGCAAGTaGCTGGGGCTGTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: IELVQGALEVCNPLPELLMKRSK*LGLSGR
Trigger: CCTGCCCGACAGCCCCAGCAACTTGCTGCGCTTCAT...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS GCA 90 bp GAGGGAACAGGGAAACTCAGAAGTCCTGCCCAGCCCTCAGTCTCCTaGTCTGCATTTGGCAGAGGATGGAAGGGCTCCTGTCCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: EGTGKLRSPAQPSVS*SAFGRGWKGSCPRG
Trigger: ACCCCTTGGACAGGAGCCCTTCCATCCTCTGCCAAATGCAGAGCAGGAGACTGAGGGCTGGGCAGGACTTCTGAGTTTCCCTGTTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS CCA 90 bp GGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCTGTaGAGGGTGGCAGGAAAGCCTGCTCTGTCCTCCTCTGCTTGGACC +
Preference number: 5 (lower is better)
Translates to: GFIELVQGALEVCNL*RVAGKPALSSSAWT
Trigger: GGTCCAAGCAGAGGAGGACAGAGCAGGCTTTCCTGCCACCCTCCACAGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS-3UTR CAA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAGCATGAGGTTGACGTaGAGCGTAAGGATCTGGCGG +
Preference number: 5 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQASMRLT*SVRIWR
Trigger: CCGCCAGATCCTTACGCTCAACGTCAACCTCATGCT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTATGGCTTCATTGAGCTaGTCCAGGGCGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAMASLS*SRALWK
Trigger: CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGAAGCGAAGCGCGTCTaGCACAGTGTCAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQEAKRV*HSVRLA
Trigger: GGCCAGCCTGACACTGTGCAAGACGCGCTTCGCTTC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGGCCATGGGTACCAGTTaGGCAAAGATGTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRAMGTS*AKMSGP
Trigger: AGGCCCTGACATCTTTGCCAAACTGGTACCCATGGC...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTATGTTCCTGCGCATCTaGCAGCTCTCGCCAGACAGT +
Preference number: 5 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQAMFLRI*QLSPDS
Trigger: ACTGTCTGGCGAGAGCTGCAAGATGCGCAGGAACAT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CCTGCTGCAACTGCCGCAGCCTCTCAGGATGCTCATAGGGGTCCCGCTCAATCAATGTTCCTGCGCATCTaGCAGCTCTCGCCAGACAGT +
Preference number: 5 (lower is better)
Translates to: PAATAAASQDAHRGPAQSMFLRI*QLSPDS
Trigger: ACTGTCTGGCGAGAGCTGCAAGATGCGCAGGAACAT...TGATTGAGCGGGACCCCTATGAGCATCCTGAGAGGCTGCGGCAGTTGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS GCA 90 bp CCTGGGGCTGCTCACACCCATGTGAAGGTGAGACAGAGGGGGCACTaGTGTTATCCACAATCAGGACAACATGGCTCTGAGAACCAGGGC +
Preference number: 5 (lower is better)
Translates to: PGAAHTHVKVRQRGH*CYPQSGQHGSENQG
Trigger: GCCCTGGTTCTCAGAGCCATGTTGTCCTGATTGTGGATAACAGCAGTGCCCCCTCTGTCTCACCTTCACATGGGTGTGAGCAGCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS CCA 90 bp AGTCCTGCCCAGCCCTCAGTCTCCTGCTCTGCATTTGGCAGAGGATaGAAGGGCTCCTGTCCAAGGGGTCCAATCTTGAAGCTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SPAQPSVSCSAFGRG*KGSCPRGPILKLQG
Trigger: TCCCTGAAGCTTCAAGATTGGACCCCTTGGACAGGAGCCCTTCCATCCTCTGCCAAATGCAGAGCAGGAGACTGAGGGCTGGGCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTCATGGGCCACAGACTaGCCTGAGAAGATCTCTGTC +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLSWATD*PEKISV
Trigger: GACAGAGATCTTCTCAGGCAAGTCTGTGGCCCATGA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp ATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGAACTTCTGCAGGCCTGCTCGTACTaGATGTCCTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: IELVQGALEVCNPLPELLQACSY*MSSWAT
Trigger: TGTGGCCCATGAGGACATCAAGTACGAGCAGGCCTG...CAGAAGTTCGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAACTTGATGGCTTCATaGAGCTTGTCCAGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLNLMAS*SLSRAL
Trigger: GAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGTGGCCCTTGGCCAACTaGATGGCTTCATTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLWPLAN*MASLSL
Trigger: CAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp ATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATGCAACCCGCTCCCCGGCCATGGGTACCAGTTaGGCAAAGATGTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: MASLSLSRALWKYATRSPAMGTS*AKMSGP
Trigger: AGGCCCTGACATCTTTGCCAAACTGGTACCCATGGC...CGGGGAGCGGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGCTGCGTACTGCACGTaGGCCTCTGTCAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCAAYCT*ASVSAQ
Trigger: CTGTGCACTGACAGAGGCCAACGTGCAGTACGCAGC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGCCGAATGCTGAGCTaGGCAATGGTGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCGRMLS*AMVAWM
Trigger: CATCCAGGCCACCATTGCCAAGCTCAGCATTCGGCC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp TGGTCTCGGAACTGCAGGCTCAGCACGCGCTCCACATGGGTTTCGGTGCTGCGGAAACCTGTTCAGGTCTaGTTGAGTGTCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: WSRNCRLSTRSTWVSVLRKPVQV*LSVQSG
Trigger: TCCACTCTGGACACTCAACAAGACCTGAACAGGTTT...CCGCAGCACCGAAACCCATGTGGAGCGCGTGCTGAGCCTGCAGTTCCGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS GCA 90 bp AACAGGGAAACTCAGAAGTCCTGCCCAGCCCTCAGTCTCCTGCTCTaGATTTGGCAGAGGATGGAAGGGCTCCTGTCCAAGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: NRETQKSCPALSLLL*IWQRMEGLLSKGSN
Trigger: ATTGGACCCCTTGGACAGGAGCCCTTCCATCCTCTGCCAAATGCAGAGCAGGAGACTGAGGGCTGGGCAGGACTTCTGAGTTTCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS GCA 90 bp TCCAAGGACACCCAAGCTGGAGGGAACAGGGAAACTCAGAAGTCCTaGCCAGCCCTCAGTCTCCTGCTCTGCATTTGGCAGAGGATGGAA +
Preference number: 5 (lower is better)
Translates to: SKDTQAGGNRETQKS*PALSLLLCIWQRME
Trigger: TTCCATCCTCTGCCAAATGCAGAGCAGGAGACTGAGGGCTGGGCAGGACTTCTGAGTTTCCCTGTTCCCTCCAGCTTGGGTGTCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS GCA 90 bp CTACTACCAGGTCTGGCCTGGTCTCACAGAACATGCCCAGGGCACTaGTGGAAACAGTGGAACAGAAGGCACCTCCTCCTCCCAAGACAT +
Preference number: 5 (lower is better)
Translates to: LLPGLAWSHRTCPGH*WKQWNRRHLLLPRH
Trigger: ATGTCTTGGGAGGAGGAGGTGCCTTCTGTTCCACTGTTTCCAGCAGTGCCCTGGGCATGTTCTGTGAGACCAGGCCAGACCTGGTAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 90 bp CCCTTGGCCAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTaGAAGTATGCAACCTGTGGAGGGTGGCAGGAAAGCCTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PLANLMASLSLSRAL*KYATCGGWQESLLC
Trigger: ACAGAGCAGGCTTTCCTGCCACCCTCCACAGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 90 bp CAGAGAGCAAATTGTGACCTCGGACCCCTACTACCAGGTCTGGCCTaGTCTCACAGAACATGCCCAGGGCACTGCTGGAAACAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: QRANCDLGPLLPGLA*SHRTCPGHCWKQWN
Trigger: GTTCCACTGTTTCCAGCAGTGCCCTGGGCATGTTCTGTGAGACCAGGCCAGACCTGGTAGTAGGGGTCCGAGGTCACAATTTGCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 90 bp CTCAGCAGAGAGCAAATTGTGACCTCGGACCCCTACTACCAGGTCTaGCCTGGTCTCACAGAACATGCCCAGGGCACTGCTGGAAACAGT +
Preference number: 5 (lower is better)
Translates to: LSREQIVTSDPYYQV*PGLTEHAQGTAGNS
Trigger: ACTGTTTCCAGCAGTGCCCTGGGCATGTTCTGTGAGACCAGGCCAGACCTGGTAGTAGGGGTCCGAGGTCACAATTTGCTCTCTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS-3UTR CAA 90 bp GACCAGGTAGGCAAAACCTGTTCAGGTCTTGTTGAGTGTCCAGAGTGGATCCAGTCCTCAGACACCCGCTaGTCCATGGCCCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: DQVGKTCSGLVECPEWIQSSDTR*SMAPSM
Trigger: CATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGA...CTGGATCCACTCTGGACACTCAACAAGACCTGAACAGGTTTTGCCTACCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTGGCCCAGCATGAGGTaGACGTTGAGCGTAAGGATC +
Preference number: 5 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSWPSMR*TLSVRI
Trigger: GATCCTTACGCTCAACGTCAACCTCATGCTGGGCCA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGTGTCAGGCTGGCCCTaGGCCAACTTGATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCVSGWP*ANLMAS
Trigger: TGAAGCCATCAAGTTGGCCAAGGGCCAGCCTGACAC...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGGTGTCAGGCTGGCCCTaGGCCAACTTGATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQVSGWP*ANLMAS
Trigger: TGAAGCCATCAAGTTGGCCAAGGGCCAGCCTGACAC...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGTCCAGGACCTCATTCTaGTCCTCAATCTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRSRTSF*SSILAI
Trigger: GATGGCCAAGATTGAGGACAAGAATGAGGTCCTGGA...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTGGACTTCCATGTACTaGGCCCATTCTCGCCTCACC +
Preference number: 5 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSWTSMY*AHSRLT
Trigger: GGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCCA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS TCA 90 bp ACAGAGGGGGCACTGCTGTTATCCACAATCAGGACAACATGGCTCTaGGAACCAGGGCAACGAGTCCAAGGACACCCAAGCTGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: TEGALLLSTIRTTWL*EPGQRVQGHPSWRE
Trigger: TTCCCTCCAGCTTGGGTGTCCTTGGACTCGTTGCCCTGGTTCTCAGAGCCATGTTGTCCTGATTGTGGATAACAGCAGTGCCCCCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS TCA 90 bp GCAAGCCTCACCACTCAATCTGAGGTCTCAGCAGAGAGCAAATTGTaGCCTCGGACCCCTACTACCAGGTCTGGCCTGGTCTCACAGAAC +
Preference number: 5 (lower is better)
Translates to: ASLTTQSEVSAESKL*PRTPTTRSGLVSQN
Trigger: GTTCTGTGAGACCAGGCCAGACCTGGTAGTAGGGGTCCGAGGTCACAATTTGCTCTCTGCTGAGACCTCAGATTGAGTGGTGAGGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS GCA 90 bp CAACTTGATGGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATaGAACCTGTGGAGGGTGGCAGGAAAGCCTGCTCTGTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: QLDGFIELVQGALEV*NLWRVAGKPALSSS
Trigger: AGAGGAGGACAGAGCAGGCTTTCCTGCCACCCTCCACAGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 90 bp GAAACTCAGAAGTCCTGCCCAGCCCTCAGTCTCCTGCTCTGCATTTaGCAGAGGATGGAAGGGCTCCTGTCCAAGGGGTCCAATCTTGAA +
Preference number: 5 (lower is better)
Translates to: ETQKSCPALSLLLCI*QRMEGLLSKGSNLE
Trigger: TTCAAGATTGGACCCCTTGGACAGGAGCCCTTCCATCCTCTGCCAAATGCAGAGCAGGAGACTGAGGGCTGGGCAGGACTTCTGAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS-3UTR CAA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTAGCATGAGGTTGACGTaGAGCGTAAGGATCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCSMRLT*SVRIWR
Trigger: CCGCCAGATCCTTACGCTCAACGTCAACCTCATGCT...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGTGGCCCAGCATGAGGTaGACGTTGAGCGTAAGGATC +
Preference number: 5 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQWPSMR*TLSVRI
Trigger: GATCCTTACGCTCAACGTCAACCTCATGCTGGGCCA...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GAGCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGAGAAAGCTCTTCCTGTaGTCCAACATCGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: EQNLTQSLQYISTPQGCRRKLFL*SNIDFS
Trigger: GGAGAAGTCGATGTTGGACAACAGGAAGAGCTTTCT...CCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GCAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTAGAAAGCTCTTCCTGTaGTCCAACATCGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: AEPDPEPAVHFHPTGVQARKLFL*SNIDFS
Trigger: GGAGAAGTCGATGTTGGACAACAGGAAGAGCTTTCT...AGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTATGGCTTCATTGAGCTaGTCCAGGGCGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFMASLS*SRALWK
Trigger: CTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCAT...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp GGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTTCTTGTCCTCAATCTaGGCCATCATCTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: GRAKGSRNGSKRLCPLRSFLSSI*AIISRS
Trigger: GCTCCGGGAGATGATGGCCAAGATTGAGGACAAGAA...GCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp AGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTGGGCAGTGGACTTCCATGTACTaGGCCCATTCTCGCCTCACC +
Preference number: 5 (lower is better)
Translates to: RNGSKRLCPLRSSAGCGQWTSMY*AHSRLT
Trigger: GGTGAGGCGAGAATGGGCCAAGTACATGGAAGTCCA...CTGCCCACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAGTAGCGTGCCACTTTTaGCTTCTCCATCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRVACHF*LLHLSL
Trigger: GAGGCTGAGATGGAGAAGCAAAAAGTGGCACGCTAC...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp CAGAACCTGACCCAGAGCCTGCAGTACATTTCCACCCCACAGGGGTGCAGGCTGAAACCTGTTCAGGTCTaGTTGAGTGTCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: QNLTQSLQYISTPQGCRLKPVQV*LSVQSG
Trigger: TCCACTCTGGACACTCAACAAGACCTGAACAGGTTT...CAGCCTGCACCCCTGTGGGGTGGAAATGTACTGCAGGCTCTGGGTCAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTAACTTGATGGCTTCATaGAGCTTGTCCAGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFNLMAS*SLSRAL
Trigger: GAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTT...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGCGGTGCAGCTCACTGTaGGTGAAGGAGGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVRCSSL*VKEAFS
Trigger: TGAGAAGGCCTCCTTCACCAACAGTGAGCTGCACCG...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTCGTGGAGTTCCACTTTaGGTCCAAGTCGCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCRGVPL*VQVAEY
Trigger: GTACTCAGCGACTTGGACCAAAAGTGGAACTCCACG...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACAGGCCGAATGCTGAGCTaGGCAATGGTGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTGRMLS*AMVAWM
Trigger: CATCCAGGCCACCATTGCCAAGCTCAGCATTCGGCC...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp CATGTGCAGATGAGCCACGGCTGCGAAGTAGTAGATCTTCATCTGCACAAGTTTTTGCTCATCCGCTGTTaGCCCCGCAGGGAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: HVQMSHGCEVVDLHLHKFLLIRC*PRRELS
Trigger: GGACAGCTCCCTGCGGGGCAAACAGCGGATGAGCAA...AAACTTGTGCAGATGAAGATCTACTACTTCGCAGCCGTGGCTCATCTGCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS TCA 90 bp AGTGCAGCGCTCCAAGGTTGTAGAGAATACAGGCCTGCTCGTACTTaGTGTCCTCATGGGCCACAGACTTGCCTGAGAAGATCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: SAALQGCREYRPART*CPHGPQTCLRRSLS
Trigger: GGACAGAGATCTTCTCAGGCAAGTCTGTGGCCCATGAGGACATCAAGTACGAGCAGGCCTGTATTCTCTACAACCTTGGAGCGCTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265562.5
ENST00000456221.5
ENST00000602307.5
CDS TCA 90 bp CAGGCAGCTCACCAAGGTTGTAGAGAATACAGGCCTGCTCGTACTTaGTGTCCTCATGGGCCACAGACTTGCCTGAGAAGATCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: QAAHQGCREYRPART*CPHGPQTCLRRSLS
Trigger: GGACAGAGATCTTCTCAGGCAAGTCTGTGGCCCATGAGGACATCAAGTACGAGCAGGCCTGTATTCTCTACAACCTTGGTGAGCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683323.1
CDS-3UTR CAA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTTCCAGGACCTCATTCTaGTCCTCAATCTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCSRTSF*SSILAI
Trigger: GATGGCCAAGATTGAGGACAAGAATGAGGTCCTGGA...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAGCTCTGCTGGGTGTTGCAGAAAGTTATGCTaGCTCATCCGCTGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: GSRNGSKRLCPLRSSAGCCRKLC*LIRCLP
Trigger: GGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCA...ACACCCAGCAGAGCTTCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp TCCGTGAACACACCTGACAGCACTTGCATGGACTGTACAAGGTTCCTGACAGTGTGGCCCTTGGCCAACTaGATGGCTTCATTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SVNTPDSTCMDCTRFLTVWPLAN*MASLSL
Trigger: CAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCA...CACTGTCAGGAACCTTGTACAGTCCATGCAAGTGCTGTCAGGTGTGTTCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp CCAGGCAGGGCCAAAGGCAGCAGAAATGGGAGTAAGAGACTGTGCCCACTGAGAAAGTCGTTGTCCTTCTaGGCAGAATTGTACTTTCCC +
Preference number: 5 (lower is better)
Translates to: PGRAKGSRNGSKRLCPLRKSLSF*AELYFP
Trigger: GGGAAAGTACAATTCTGCCAAGAAGGACAACGACTT...TCTCAGTGGGCACAGTCTCTTACTCCCATTTCTGCTGCCTTTGGCCCTGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp GTGGGATGTGGCTGTAGGCATCAAGGTTGTCCACCGTCTCGGGATCCAACTGCAAAGTCGTTGTCCTTCTaGGCAGAATTGTACTTTCCC +
Preference number: 5 (lower is better)
Translates to: VGCGCRHQGCPPSRDPTAKSLSF*AELYFP
Trigger: GGGAAAGTACAATTCTGCCAAGAAGGACAACGACTT...TGCAGTTGGATCCCGAGACGGTGGACAACCTTGATGCCTACAGCCACATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp GTCCTGGGCGGCCAGGTTCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTTCCTTCTTGGCAGAATaGTACTTTCCCCCAATGACA +
Preference number: 5 (lower is better)
Translates to: VLGGQVLLQVHLQLVILFSFLAE*YFPPMT
Trigger: TGTCATTGGGGGAAAGTACAATTCTGCCAAGAAGGA...AAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGAACCTGGCCGCCCAGGAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAACAGGTGCTACGGGCATaGCATGGGGCCCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEQVLRA*HGALGP
Trigger: GGGCCCCAGGGCCCCATGCAATGCCCGTAGCACCTG...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS-3UTR CAA 90 bp TCTGCTCCAGGTACACCTTCAGCTGGTCATACTTTTTCAGCTGCTCCTCGAACATGCAGAAAGTTATGCTaGCTCATCCGCTGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: SAPGTPSAGHTFSAAPRTCRKLC*LIRCLP
Trigger: GGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCA...TGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTGAAGGTGTACCTGGAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602307.5
CDS-3UTR CAA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAAGCACTGGCCAAGGGTTaGCATGGAGGAGGCACACCA +
Preference number: 5 (lower is better)
Translates to: YYFNSKELKNVGSHKGAEALAKG*HGGGTP
Trigger: TGGTGTGCCTCCTCCATGCAAACCCTTGGCCAGTGC...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS CCA 90 bp CTGTCTGAGCAACTCCAGCTTCTTCAGTTCTTCATTGTAGGCTTCTaGGTTCTCTCCATAATTCTTCAGGACAAACTTCTTCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: LSEQLQLLQFFIVGF*VLSIILQDKLLHSW
Trigger: CCAGCTGTGAAGAAGTTTGTCCTGAAGAATTATGGAGAGAACCCAGAAGCCTACAATGAAGAACTGAAGAAGCTGGAGTTGCTCAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265562.5
ENST00000462998.1
ENST00000602307.5
ENST00000683323.1
CDS-3UTR CAA 90 bp TATTATTTCAATAGCAAAGAGCTGAAAAATGTCGGGTCCCATAAAGGAGCAGAATCCTTCTTGGCAGAATaGTACTTTCCCCCAATGACA +
Preference number: 5 (lower is better)
Translates to: YYFNSKELKNVGSHKGAESFLAE*YFPPMT
Trigger: TGTCATTGGGGGAAAGTACAATTCTGCCAAGAAGGA...TTCTGCTCCTTTATGGGACCCGACATTTTTCAGCTCTTTGCTATTGAAATAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000602307.5
CDS GCA 72 bp GGCACCCGCCGGCCACCCGGCCACTCCCGTAGCTGCTaGAGCTGCTGGCTCAGCCACGAGCCCAGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: GTRRPPGHSRSC*SCWLSHEPSPA
Trigger: GGCGGGGCTGGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCTACGGGAGTGGCCGGGTGGCCGGCGGGTGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456221.5
ENST00000602307.5
CDS GCA 72 bp CACCGGCCTCCTTCAGGTCCAGCCAGATCATGGGCATaGGGGGCACGGCCTCCATGGCGGCTGGCACCCGCC +
Preference number: 6 (lower is better)
Translates to: HRPPSGPARSWA*GARPPWRLAPA
Trigger: GGCGGGTGCCAGCCGCCATGGAGGCCGTGCCCCGCATGCCCATGATCTGGCTGGACCTGAAGGAGGCCGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265562.5
ENST00000456221.5
ENST00000462998.1
ENST00000602307.5
ENST00000683323.1
CDS CCA 72 bp CGCCGGCTGCGCACTCCTCAGACACCCGCTTGTCCATaGCCCCCAGCATGGAGTGCAGCGCTCCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: RRLRTPQTPACP*PPAWSAALLGR
Trigger: CCTCCCCAGGAGCGCTGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGAGTGCGCAGCCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS CAA 72 bp GCGAAGGCGCCGGCTGCGCACTCCTCAGACACCCGCTaGTCCATGGCCCCCAGCATGGAGTGCAGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: AKAPAAHSSDTR*SMAPSMECSAP
Trigger: TGGAGCGCTGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGAGTGCGCAGCCGGCGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456221.5
CDS CAA 72 bp GCGAAGGCGCCGGCTGCGCACTCCTCAGACACCCGCTaGTCCATGGCCCCCAGCATGGAGTGCAGCGCTCCT +
Preference number: 6 (lower is better)
Translates to: AKAPAAHSSDTR*SMAPSMECSAP
Trigger: AGGAGCGCTGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGAGTGCGCAGCCGGCGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS CCA 72 bp CGCCGGCTGCGCACTCCTCAGACACCCGCTTGTCCATaGCCCCCAGCATGGAGTGCAGCGCTCCAAGGTTGT +
Preference number: 6 (lower is better)
Translates to: RRLRTPQTPACP*PPAWSAALQGC
Trigger: ACAACCTTGGAGCGCTGCACTCCATGCTGGGGGCCATGGACAAGCGGGTGTCTGAGGAGTGCGCAGCCGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456221.5
CDS CCA 72 bp ACGAGGCCACCAGGGTCTGCAGCGTGGAGTTCCACCTaGTGGGCAGAAGGGCCAGCTCCAGGTGAACCATGG +
Preference number: 6 (lower is better)
Translates to: TRPPGSAAWSST*WAEGPAPGEPW
Trigger: CCATGGTTCACCTGGAGCTGGCCCTTCTGCCCACCAGGTGGAACTCCACGCTGCAGACCCTGGTGGCCTCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495653.1
CDS TCA 72 bp GCAGAGGACTGGGCACTGACTTTTGGTCCAAGTCGCTaGGTACCCGCCGCACGGCTGCGTACTGCACGTTGG +
Preference number: 6 (lower is better)
Translates to: AEDWALTFGPSR*VPAARLRTARW
Trigger: CCAACGTGCAGTACGCAGCCGTGCGGCGGGTACTCAGCGACTTGGACCAAAAGTCAGTGCCCAGTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495653.1
CDS CAA 90 bp CTAGCCCCACCACCCCAGGCGGGAAGGCAGCATTGGGAAACCTGTTaGGAATGGACATTTCATTCCTCTCCCAGCATAGGCAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: LAPPPQAGRQHWETC*EWTFHSSPSIGSPG
Trigger: CCCAGGGCTGCCTATGCTGGGAGAGGAATGAAATGTCCATTCCAAACAGGTTTCCCAATGCTGCCTTCCCGCCTGGGGTGGTGGGGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CAA 90 bp ACAGTGTCAGGCTGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTaGTCCAGGGCGCTCTGGAAGTATGCAACCTGTGGAGGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: TVSGWPLANLMASLS*SRALWKYATCGGWQ
Trigger: CTGCCACCCTCCACAGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCAGCCTGACACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS GCA 72 bp CCCGACTCTGCAGGTAATGAAGCTGGCCGAGGTACTTaGGGAGGACACTACAGCCCTCAAAGTCTCGTGGGA +
Preference number: 6 (lower is better)
Translates to: PDSAGNEAGRGT*GGHYSPQSLVG
Trigger: TCCCACGAGACTTTGAGGGCTGTAGTGTCCTCCGCAAGTACCTCGGCCAGCTTCATTACCTGCAGAGTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265562.5
ENST00000456221.5
ENST00000683323.1
CDS GCA 72 bp ACTCAGAAGTCCTGCCCAGCCCTCAGTCTCCTGCTCTaGATTTGGCAGAGGATGGAAGGGCTCCTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: TQKSCPALSLLL*IWQRMEGLLSK
Trigger: CTTGGACAGGAGCCCTTCCATCCTCTGCCAAATGCAGAGCAGGAGACTGAGGGCTGGGCAGGACTTCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS GCA 72 bp GGAAGTATGCAACCTGTGGAGGGTGGCAGGAAAGCCTaGTCTGTCCTCCTCTGCTTGGACCCTTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GSMQPVEGGRKA*SVLLCLDPFSS
Trigger: GGAGGAGAAAGGGTCCAAGCAGAGGAGGACAGAGCAGGCTTTCCTGCCACCCTCCACAGGTTGCATACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS GCA 72 bp GGCTTCATTGAGCTTGTCCAGGGCGCTCTGGAAGTATaGAACCTGTGGAGGGTGGCAGGAAAGCCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: GFIELVQGALEV*NLWRVAGKPAL
Trigger: CAGAGCAGGCTTTCCTGCCACCCTCCACAGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS GCA 72 bp CCCCTACTACCAGGTCTGGCCTGGTCTCACAGAACATaGCCAGGGCACTGCTGGAAACAGTGGAACAGAAGG +
Preference number: 6 (lower is better)
Translates to: PLLPGLAWSHRT*PGHCWKQWNRR
Trigger: CCTTCTGTTCCACTGTTTCCAGCAGTGCCCTGGGCATGTTCTGTGAGACCAGGCCAGACCTGGTAGTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 72 bp GAGCAAATTGTGACCTCGGACCCCTACTACCAGGTCTaGCCTGGTCTCACAGAACATGCCCAGGGCACTGCT +
Preference number: 6 (lower is better)
Translates to: EQIVTSDPYYQV*PGLTEHAQGTA
Trigger: AGCAGTGCCCTGGGCATGTTCTGTGAGACCAGGCCAGACCTGGTAGTAGGGGTCCGAGGTCACAATTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 72 bp AATTGTGACCTCGGACCCCTACTACCAGGTCTGGCCTaGTCTCACAGAACATGCCCAGGGCACTGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: NCDLGPLLPGLA*SHRTCPGHCWK
Trigger: TTTCCAGCAGTGCCCTGGGCATGTTCTGTGAGACCAGGCCAGACCTGGTAGTAGGGGTCCGAGGTCACAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 72 bp TCTCCCAGCAGCTTCCACGGAACCTTCCTCACCTTCTaGCTGATGCTTGCACTGGCCAAGGGTTTGCATGGA +
Preference number: 6 (lower is better)
Translates to: SPSSFHGTFLTF*LMLALAKGLHG
Trigger: TCCATGCAAACCCTTGGCCAGTGCAAGCATCAGCCAGAAGGTGAGGAAGGTTCCGTGGAAGCTGCTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683708.1
CDS CAA 72 bp GGCTGGCCCTTGGCCAACTTGATGGCTTCATTGAGCTaGTCCAGGGCGCTCTGGAAGTATGCAACCTGTGGA +
Preference number: 6 (lower is better)
Translates to: GWPLANLMASLS*SRALWKYATCG
Trigger: TCCACAGGTTGCATACTTCCAGAGCGCCCTGGACAAGCTCAATGAAGCCATCAAGTTGGCCAAGGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS TCA 72 bp GAGGATGGAAGGGCTCCTGTCCAAGGGGTCCAATCTTaGAGCTTCAGGGATGTTTGCACAGAACTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: EDGRAPVQGVQS*SFRDVCTELWG
Trigger: GCCCCAGAGTTCTGTGCAAACATCCCTGAAGCTTCAAGATTGGACCCCTTGGACAGGAGCCCTTCCATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS TCA 72 bp ACCACTCAATCTGAGGTCTCAGCAGAGAGCAAATTGTaGCCTCGGACCCCTACTACCAGGTCTGGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: TTQSEVSAESKL*PRTPTTRSGLV
Trigger: GACCAGGCCAGACCTGGTAGTAGGGGTCCGAGGTCACAATTTGCTCTCTGCTGAGACCTCAGATTGAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 72 bp GTACTTGCGGAGGACACTACAGCCCTCAAAGTCTCGTaGGACACGGACAGCATTCTGTCTGAGCAACTCCAG +
Preference number: 6 (lower is better)
Translates to: VLAEDTTALKVS*DTDSILSEQLQ
Trigger: CTGGAGTTGCTCAGACAGAATGCTGTCCGTGTCCCACGAGACTTTGAGGGCTGTAGTGTCCTCCGCAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265562.5
ENST00000683323.1
CDS CCA 72 bp GTACTTGCGGAGGACACTACAGCCCTCAAAGTCTCGTaGGACACGGACAGCATTCTTCTTCACAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: VLAEDTTALKVS*DTDSILLHSWL
Trigger: CAGCCAGCTGTGAAGAAGAATGCTGTCCGTGTCCCACGAGACTTTGAGGGCTGTAGTGTCCTCCGCAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456221.5
CDS CAA 72 bp GCCTGCTCGTACTTGATGTCCTCATGGGCCACAGACTaGCCTGAGAAGATCTCTGTCCAGGTGACAGGGACA +
Preference number: 6 (lower is better)
Translates to: ACSYLMSSWATD*PEKISVQVTGT
Trigger: TGTCCCTGTCACCTGGACAGAGATCTTCTCAGGCAAGTCTGTGGCCCATGAGGACATCAAGTACGAGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265562.5
ENST00000456221.5
ENST00000683323.1
CDS CAA 72 bp CACACTCACTCCAGGACCTCATTCTTGTCCTCAATCTaGGCCATCATCTCCCGGAGCAGCTTGGCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: HTHSRTSFLSSI*AIISRSSLAFS
Trigger: GGAGAAGGCCAAGCTGCTCCGGGAGATGATGGCCAAGATTGAGGACAAGAATGAGGTCCTGGAGTGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS TCA 72 bp GCACTGCTGTTATCCACAATCAGGACAACATGGCTCTaGGAACCAGGGCAACGAGTCCAAGGACACCCAAGC +
Preference number: 6 (lower is better)
Translates to: ALLLSTIRTTWL*EPGQRVQGHPS
Trigger: GCTTGGGTGTCCTTGGACTCGTTGCCCTGGTTCTCAGAGCCATGTTGTCCTGATTGTGGATAACAGCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477276.2
CDS CCA 72 bp ACACTCACTCCAGGACCTCATTCTTGTCCTCAATCTTaGCCATCATCTCCCGGAGCAGCTTGGCCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: TLTPGPHSCPQS*PSSPGAAWPSP
Trigger: AGGAGAAGGCCAAGCTGCTCCGGGAGATGATGGCCAAGATTGAGGACAAGAATGAGGTCCTGGAGTGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS CCA 72 bp CAGGCGGGAAGGCAGCATTGGGAAACCTGTTTGGAATaGACATTTCATTCCTCTCCCAGCATAGGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: QAGRQHWETCLE*TFHSSPSIGSP
Trigger: AGGGCTGCCTATGCTGGGAGAGGAATGAAATGTCCATTCCAAACAGGTTTCCCAATGCTGCCTTCCCGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683566.1
CDS TCA 72 bp TTCTTCAGGACAAACTTCTTCACAGCTGGCTGGAAGTaGAAGTCACCGGCCTCCTTCAGGTCCAGCCAGATC +
Preference number: 6 (lower is better)
Translates to: FFRTNFFTAGWK*KSPASFRSSQI
Trigger: GATCTGGCTGGACCTGAAGGAGGCCGGTGACTTTCACTTCCAGCCAGCTGTGAAGAAGTTTGTCCTGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265562.5
ENST00000462998.1
ENST00000602307.5
ENST00000683323.1
CDS TCA 72 bp CTCCAAGGTTGTAGAGAATACAGGCCTGCTCGTACTTaGTGTCCTCATGGGCCACAGACTTGCCTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LQGCREYRPART*CPHGPQTCLRR
Trigger: TCTTCTCAGGCAAGTCTGTGGCCCATGAGGACATCAAGTACGAGCAGGCCTGTATTCTCTACAACCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265562.5
ENST00000456221.5
ENST00000602307.5
CDS TCA 72 bp CACCAAGGTTGTAGAGAATACAGGCCTGCTCGTACTTaGTGTCCTCATGGGCCACAGACTTGCCTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: HQGCREYRPART*CPHGPQTCLRR
Trigger: TCTTCTCAGGCAAGTCTGTGGCCCATGAGGACATCAAGTACGAGCAGGCCTGTATTCTCTACAACCTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683323.1