RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPN21 (Homo sapiens)

Ensembl gene IDs: ENSG00000070778

Ensembl transcript IDs: ENST00000328736.7, ENST00000536337.5, ENST00000553531.1, ENST00000554178.1, ENST00000554270.5, ENST00000554628.5, ENST00000555243.1, ENST00000556564.6, ENST00000557249.1

Found 720 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCAGGGGCCCGGCGAGCAGGACGCGAGGGCAGCCAGGTGGGTCCTaGGCCAGGCCGGGCCGAGGCTCGCGCGCACGTGCAGGAGGCGCC +
Preference number: 1 (lower is better)
Translates to: CRGPASRTRGQPGGS*ARPGRGSRARAGGA
Trigger: GGCGCCTCCTGCACGTGCGCGCGAGCCTCGGCCCGGCCTGGCCCAGGACCCACCTGGCTGCCCTCGCGTCCTGCTCGCCGGGCCCCTGCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp GCCAGGTGGGTCCTGGGCCAGGCCGGGCCGAGGCTCGCGCGCACGTaGAGGAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTC +
Preference number: 1 (lower is better)
Translates to: ARWVLGQAGPRLART*RRRPGPALLLEVLV
Trigger: GACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTCCTGCACGTGCGCGCGAGCCTCGGCCCGGCCTGGCCCAGGACCCACCTGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp ATCCTCTTCTCCGCGTCTGGGACGTGGGCCTTGGGCTCCAGGATGTaGAGGGGCCCGGCGAGCAGGACGCGAGGGCAGCCAGGTGGGTCC +
Preference number: 1 (lower is better)
Translates to: ILFSASGTWALGSRM*RGPASRTRGQPGGS
Trigger: GGACCCACCTGGCTGCCCTCGCGTCCTGCTCGCCGGGCCCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp TCCTCCGGCCCTTCTCGCTGTGTCCTCTCGGTGAAAACGCTGGGCTaGGAGCCCACCGAGACGGCTCGCGGCGCCACCTCTGCCGCCGAC +
Preference number: 1 (lower is better)
Translates to: SSGPSRCVLSVKTLG*EPTETARGATSAAD
Trigger: GTCGGCGGCAGAGGTGGCGCCGCGAGCCGTCTCGGTGGGCTCCCAGCCCAGCGTTTTCACCGAGAGGACACAGCGAGAAGGGCCGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 90 bp TCAAGCCCTCCGCCTCCTCCGGCCCTTCTCGCTGTGTCCTCTCGGTaGAAACGCTGGGCTGGGAGCCCACCGAGACGGCTCGCGGCGCCA +
Preference number: 1 (lower is better)
Translates to: SSPPPPPALLAVSSR*KRWAGSPPRRLAAP
Trigger: TGGCGCCGCGAGCCGTCTCGGTGGGCTCCCAGCCCAGCGTTTTCACCGAGAGGACACAGCGAGAAGGGCCGGAGGAGGCGGAGGGCTTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp GGGAGACGGGCTGTGGAAGCTGTAGCTCAGGCTGAACGGGCAGTGTaGGGCCGCTGGCGAGGGGAGCTGTGCGTGCTCGCGGATCTCGGG +
Preference number: 1 (lower is better)
Translates to: GRRAVEAVAQAERAV*GRWRGELCVLADLG
Trigger: CCCGAGATCCGCGAGCACGCACAGCTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGCCTGAGCTACAGCTTCCACAGCCCGTCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp CGTCTCTCCAGGGCCGCTGGGCCTCTGCGGTCGTGCGGACGGGGCTaGTGTCCATCATCCTCTTCTCCGCGTCTGGGACGTGGGCCTTGG +
Preference number: 1 (lower is better)
Translates to: RLSRAAGPLRSCGRG*CPSSSSPRLGRGPW
Trigger: CCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp CGGACGGGGCTGCTGTCCATCATCCTCTTCTCCGCGTCTGGGACGTaGGCCTTGGGCTCCAGGATGTGCAGGGGCCCGGCGAGCAGGACG +
Preference number: 1 (lower is better)
Translates to: RTGLLSIILFSASGT*ALGSRMCRGPASRT
Trigger: CGTCCTGCTCGCCGGGCCCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp GGTCGTGCGGACGGGGCTGCTGTCCATCATCCTCTTCTCCGCGTCTaGGACGTGGGCCTTGGGCTCCAGGATGTGCAGGGGCCCGGCGAG +
Preference number: 1 (lower is better)
Translates to: GRADGAAVHHPLLRV*DVGLGLQDVQGPGE
Trigger: CTCGCCGGGCCCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp GCATCAGCAGCCCGTCTCTCCAGGGCCGCTGGGCCTCTGCGGTCGTaGGGACGGGGCTGCTGTCCATCATCCTCTTCTCCGCGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: ASAARLSRAAGPLRS*GRGCCPSSSSPRLG
Trigger: TCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGGCTGCTGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp CATGGAGGGCATCAGCAGCCCGTCTCTCCAGGGCCGCTGGGCCTCTaGGGTCGTGCGGACGGGGCTGCTGTCCATCATCCTCTTCTCCGC +
Preference number: 1 (lower is better)
Translates to: HGGHQQPVSPGPLGL*GRADGAAVHHPLLR
Trigger: GCGGAGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGGCTGCTGATGCCCTCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp GACGCGGATAGGGTGCGCTCCTTGAGCCGCAGGCCCTCCAGGCCGTaGCTGAGCCCGGCCACCTCGATGCTGTTCCGTTTGTGCAGCTGC +
Preference number: 1 (lower is better)
Translates to: DADRVRSLSRRPSRP*LSPATSMLFRLCSC
Trigger: GCAGCTGCACAAACGGAACAGCATCGAGGTGGCCGGGCTCAGCCACGGCCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTATCCGCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp GACTCCGACATGGAGGGCATCAGCAGCCCGTCTCTCCAGGGCCGCTaGGCCTCTGCGGTCGTGCGGACGGGGCTGCTGTCCATCATCCTC +
Preference number: 1 (lower is better)
Translates to: DSDMEGISSPSLQGR*ASAVVRTGLLSIIL
Trigger: GAGGATGATGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGGCTGCTGATGCCCTCCATGTCGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 90 bp CAGGGTAGGGGTAGGGAGACGGGCTGTGGAAGCTGTAGCTCAGGCTaGACGGGCAGTGTGCGGCCGCTGGCGAGGGGAGCTGTGCGTGCT +
Preference number: 1 (lower is better)
Translates to: QGRGRETGCGSCSSG*TGSVRPLARGAVRA
Trigger: AGCACGCACAGCTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGCCTGAGCTACAGCTTCCACAGCCCGTCTCCCTACCCCTACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp TCCTGCAGCGAGTGCGCCACGGGCAGGCTGTCCTCCTGGAACGTTTaGACCGAGTGGTGCACGCGCCGCGTGATGAGGTCGGGGTTGCTG +
Preference number: 1 (lower is better)
Translates to: SCSECATGRLSSWNV*TEWCTRRVMRSGLL
Trigger: CAGCAACCCCGACCTCATCACGCGGCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCCCGTGGCGCACTCGCTGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp GCTGTGGAAGCTGTAGCTCAGGCTGAACGGGCAGTGTGCGGCCGCTaGCGAGGGGAGCTGTGCGTGCTCGCGGATCTCGGGCTGGCTGTA +
Preference number: 1 (lower is better)
Translates to: AVEAVAQAERAVCGR*RGELCVLADLGLAV
Trigger: TACAGCCAGCCCGAGATCCGCGAGCACGCACAGCTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGCCTGAGCTACAGCTTCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp TCGCTGACCTCCTGCAGCGAGTGCGCCACGGGCAGGCTGTCCTCCTaGAACGTTTGCACCGAGTGGTGCACGCGCCGCGTGATGAGGTCG +
Preference number: 1 (lower is better)
Translates to: SLTSCSECATGRLSS*NVCTEWCTRRVMRS
Trigger: CGACCTCATCACGCGGCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCCCGTGGCGCACTCGCTGCAGGAGGTCAGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 90 bp AGACCAGCGCCGCGGGCCTGCTGTAGGCGTACGAGCTGCCGATGTTaGGGTTTCGCAGCGAGTGGCTCTGCCGTTCCGCATGCACCAGGC +
Preference number: 1 (lower is better)
Translates to: RPAPRACCRRTSCRC*GFAASGSAVPHAPG
Trigger: GCCTGGTGCATGCGGAACGGCAGAGCCACTCGCTGCGAAACCTCAACATCGGCAGCTCGTACGCCTACAGCAGGCCCGCGGCGCTGGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp GAGTGCGCCACGGGCAGGCTGTCCTCCTGGAACGTTTGCACCGAGTaGTGCACGCGCCGCGTGATGAGGTCGGGGTTGCTGCTGCTGATG +
Preference number: 1 (lower is better)
Translates to: ECATGRLSSWNVCTE*CTRRVMRSGLLLLM
Trigger: CATCAGCAGCAGCAACCCCGACCTCATCACGCGGCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCCCGTGGCGCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 90 bp CACCGGCCTTTTCTTCAGAGAGTCCCTCCGGGCTCGGTAGCGGCCTaGCGTGGTGAGGTCGGACTCCGACATGGAGGGCATCAGCAGCCC +
Preference number: 1 (lower is better)
Translates to: HRPFLQRVPPGSVAA*RGEVGLRHGGHQQP
Trigger: GGGCTGCTGATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCGCTACCGAGCCCGGAGGGACTCTCTGAAGAAAAGGCCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 90 bp TTTTCTTCAGAGAGTCCCTCCGGGCTCGGTAGCGGCCTGACGTGGTaGGGTCGGACTCCGACATGGAGGGCATCAGCAGCCCGTCTCTCC +
Preference number: 1 (lower is better)
Translates to: FSSESPSGLGSGLTW*GRTPTWRASAARLS
Trigger: GGAGAGACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCGCTACCGAGCCCGGAGGGACTCTCTGAAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp CCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCTGCTGTaGATTAGCATGGTGGCGTCCGACAGGGACTTCTTATGGCCGTAC +
Preference number: 1 (lower is better)
Translates to: PLSSSKSSSSSSSLL*ISMVASDRDFLWPY
Trigger: GTACGGCCATAAGAAGTCCCTGTCGGACGCCACCATGCTAATCCACAGCAGCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp CAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTaGGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCA +
Preference number: 1 (lower is better)
Translates to: QPVLRTFPSACRHSD*ATYVPVPRCVDQVS
Trigger: TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
3UTR GCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCAAGCGC +
Preference number: 1 (lower is better)
Translates to: ACRHSDCATYVPVPR*VDQVSTGKYELGKR
Trigger: GCGCTTGCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
3UTR GCA 90 bp TTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTaGCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGC +
Preference number: 1 (lower is better)
Translates to: LETPLQPVLRTFPSA*RHSDCATYVPVPRC
Trigger: GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
3UTR TCA 90 bp CTCTCGGGATGTCCAGCACCTCATTGTGTTCCAGGCAGGCGATCATaGTCTCCGACAAAATCACCACGCCAGTCCTTCCTACCCCAGCAC +
Preference number: 1 (lower is better)
Translates to: LSGCPAPHCVPGRRS*SPTKSPRQSFLPQH
Trigger: GTGCTGGGGTAGGAAGGACTGGCGTGGTGATTTTGTCGGAGATCATGATCGCCTGCCTGGAACACAATGAGGTGCTGGACATCCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp ACATCGGCGAGGGCTGCAAGTAGGGCTGAGGATTATTTAAGGAGTTaGTGCTGTGTGCACTGTAGACACTGCCATTACGGATCCGACCGT +
Preference number: 1 (lower is better)
Translates to: TSARAASRAEDYLRS*CCVHCRHCHYGSDR
Trigger: ACGGTCGGATCCGTAATGGCAGTGTCTACAGTGCACACAGCACCAACTCCTTAAATAATCCTCAGCCCTACTTGCAGCCCTCGCCGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 90 bp TGGTGCTGTGTGCACTGTAGACACTGCCATTACGGATCCGACCGTTaGGGTCAATCTGGGCTCTATCCAAGCTTGTCTGAGAGTGACAGT +
Preference number: 1 (lower is better)
Translates to: WCCVHCRHCHYGSDR*GQSGLYPSLSESDS
Trigger: ACTGTCACTCTCAGACAAGCTTGGATAGAGCCCAGATTGACCTCAACGGTCGGATCCGTAATGGCAGTGTCTACAGTGCACACAGCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp ACAAATGTGTACTGGCAGAGAGTCTGCACCAGCATCATTCTCTGTTaGCTCAGCATGTCCAGCACTCTCGGGATGTCCAGCACCTCATTG +
Preference number: 1 (lower is better)
Translates to: TNVYWQRVCTSIILC*LSMSSTLGMSSTSL
Trigger: CAATGAGGTGCTGGACATCCCGAGAGTGCTGGACATGCTGAGGCAACAGAGAATGATGCTGGTGCAGACTCTCTGCCAGTACACATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp CTTAAACCTTCCATAGGTGACAGTGTTGTGCCTGGAACCAAGTCGTaGCCAGTACCTAAAGCTCTTCTCCCTTCCACCCTCCTCTTCTGC +
Preference number: 1 (lower is better)
Translates to: LKPSIGDSVVPGTKS*PVPKALLPSTLLFC
Trigger: GCAGAAGAGGAGGGTGGAAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGTCACCTATGGAAGGTTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp AAGGAAAAGGGAAAGGGTTCCTCAGCTAAATATCCCACTCATCCATaGCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCGGGGCC +
Preference number: 1 (lower is better)
Translates to: KEKGKGSSAKYPTHP*LLSGHCDKAILIGA
Trigger: GGCCCCGATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCTTTCCCTTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR GCA 90 bp TGCAGTGGACCAACAACGGAGGGTTGGGGCTTTGGGGATCACTTGTaGTATTTGTATGGCGTCGAACAGACTGGATCTCTTCAAGATATG +
Preference number: 1 (lower is better)
Translates to: CSGPTTEGWGFGDHL*YLYGVEQTGSLQDM
Trigger: CATATCTTGAAGAGATCCAGTCTGTTCGACGCCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGTCCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 90 bp AGAAGCATATGGTTCTGTATAATGTCCATTATAGTGCAACTGCGGTaGGGGAGGCATCACGTAGGGCTGGGGTTTAGGCAGAGACATCCT +
Preference number: 1 (lower is better)
Translates to: RSIWFCIMSIIVQLR*GRHHVGLGFRQRHP
Trigger: AGGATGTCTCTGCCTAAACCCCAGCCCTACGTGATGCCTCCCCCACCGCAGTTGCACTATAATGGACATTATACAGAACCATATGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 90 bp TTCCTCTTAGGTGGTTGGTTTCTGGGTAAGGCAGAGTTAGGCTGGTaGACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACAACATAC +
Preference number: 1 (lower is better)
Translates to: FLLGGWFLGKAELGW*THYLGSPVSWLTTY
Trigger: GTATGTTGTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCCTTACCCAGAAACCAACCACCTAAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR TCA 90 bp CAGATAATACTGATACCTGGTAATCTCCTGCTGCAGCTGAGAAACTaGAGGCACATAAAACACCACTCCAAAATAGACGGTAGGTTCCAA +
Preference number: 1 (lower is better)
Translates to: QIILIPGNLLLQLRN*RHIKHHSKIDGRFQ
Trigger: TTGGAACCTACCGTCTATTTTGGAGTGGTGTTTTATGTGCCTTCAGTTTCTCAGCTGCAGCAGGAGATTACCAGGTATCAGTATTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 90 bp GCTCGCGGCGCCACCTCTGCCGCCGACGCGGATAGGGTGCGCTCCTaGAGCCGCAGGCCCTCCAGGCCGTGGCTGAGCCCGGCCACCTCG +
Preference number: 2 (lower is better)
Translates to: ARGATSAADADRVRS*SRRPSRPWLSPATS
Trigger: CGAGGTGGCCGGGCTCAGCCACGGCCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTATCCGCGTCGGCGGCAGAGGTGGCGCCGCGAGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp CCCGTCTCTCCAGGGCCGCTGGGCCTCTGCGGTCGTGCGGACGGGGCTGCTGTCGCTGAACGGGCAGTGTaGGGCCGCTGGCGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PVSPGPLGLCGRADGAAVAERAV*GRWRGE
Trigger: CTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGC...GACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 90 bp CCCTCCAGGCCGTGGCTGAGCCCGGCCACCTCGATGCTGTTCCGTTaGTGCAGCTGCGCGTGGCGCGCGGCGGTGAGGGGCTCGCTGACC +
Preference number: 2 (lower is better)
Translates to: PSRPWLSPATSMLFR*CSCAWRAAVRGSLT
Trigger: GGTCAGCGAGCCCCTCACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAACAGCATCGAGGTGGCCGGGCTCAGCCACGGCCTGGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp CCCGTCTCTCCAGGGCCGCTGGGCCTCTGCGGTCGTGCGGACGGGGCTGCTGTCTTGGGCTCCAGGATGTaGAGGGGCCCGGCGAGCAGG +
Preference number: 2 (lower is better)
Translates to: PVSPGPLGLCGRADGAAVLGSRM*RGPASR
Trigger: CCTGCTCGCCGGGCCCCTGCACATCCTGGAGCCCAA...GACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp TCCGCCTCCTCCGGCCCTTCTCGCTGTGTCCTCTCGGTGAAAACGCTGGGCTGGTGCTGTTGGCGGGCCTaGGGGGCGGGTAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SASSGPSRCVLSVKTLGWCCWRA*GAGRVG
Trigger: CCCCACCCTACCCGCCCCCCAGGCCCGCCAACAGCA...CCAGCCCAGCGTTTTCACCGAGAGGACACAGCGAGAAGGGCCGGAGGAGGCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCGCCCGGCCACCTCGATaGTGTTCCGTTTGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRARPPR*CSVCAA
Trigger: AGCTGCACAAACGGAACAGCATCGAGGTGGCCGGGC...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 90 bp CTCCTGCAGCGAGTGCGCCACGGGCAGGCTGTCCTCCTGGAACGTTaGCACCGAGTGGTGCACGCGCCGCGTGATGAGGTCGGGGTTGCT +
Preference number: 2 (lower is better)
Translates to: LLQRVRHGQAVLLER*HRVVHAPRDEVGVA
Trigger: AGCAACCCCGACCTCATCACGCGGCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCCCGTGGCGCACTCGCTGCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCCCACTTACGTCCCAGTaGCACGCTGCGTGGATCAAG +
Preference number: 2 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRPLTSQ*HAAWIK
Trigger: CTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR TCA 90 bp GGCCACCTCGATGCTGTTCCGTTTGTGCAGCTGCGCGTGGCGCGCGGCGGTGAGACACCTGCGTCCGCATaGTGTTGGGAGACGGGTAGT +
Preference number: 2 (lower is better)
Translates to: GHLDAVPFVQLRVARGGETPASA*CWETGS
Trigger: ACTACCCGTCTCCCAACATCATGCGGACGCAGGTGT...CTCACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAACAGCATCGAGGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp GCTGGCTGTAGACCAGCGCCGCGGGCCTGCTGTAGGCGTACGAGCTGCCGATGTTCTCATAGTCTGGGGTaGGGCGGTAGGACGGGGGTA +
Preference number: 2 (lower is better)
Translates to: AGCRPAPRACCRRTSCRCSHSLG*GGRTGV
Trigger: TACCCCCGTCCTACCGCCCCACCCCAGACTATGAGA...ACATCGGCAGCTCGTACGCCTACAGCAGGCCCGCGGCGCTGGTCTACAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp CGGCCTGACGTGGTGAGGTCGGACTCCGACATGGAGGGCATCAGCAGCCCGTCTGTGAAAACGCTGGGCTaGGAGCCCACCGAGACGGCT +
Preference number: 2 (lower is better)
Translates to: RPDVVRSDSDMEGISSPSVKTLG*EPTETA
Trigger: AGCCGTCTCGGTGGGCTCCCAGCCCAGCGTTTTCAC...AGACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp GCTGGCTGTAGACCAGCGCCGCGGGCCTGCTGTAGGCGTACGAGCTGCCGATGTATAGTGCAACTGCGGTaGGGGAGGCATCACGTAGGG +
Preference number: 2 (lower is better)
Translates to: AGCRPAPRACCRRTSCRCIVQLR*GRHHVG
Trigger: CCCTACGTGATGCCTCCCCCACCGCAGTTGCACTAT...ACATCGGCAGCTCGTACGCCTACAGCAGGCCCGCGGCGCTGGTCTACAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR TCA 90 bp GACGGGGCTGCTGTCCATCATCCTCTTCTCCGCGTCTGGGACGTGGGCCTTGGGGCACCAGGCCCCTGTTaGGCTGCTTCATCACAGTCT +
Preference number: 2 (lower is better)
Translates to: DGAAVHHPLLRVWDVGLGAPGPC*AASSQS
Trigger: AGACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGC...CCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGACCACTTACGTCCCAGTaGCACGCTGCGTGGATCAAG +
Preference number: 2 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGPLTSQ*HAAWIK
Trigger: CTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR GCA 90 bp GGCCACCTCGATGCTGTTCCGTTTGTGCAGCTGCGCGTGGCGCGCGGCGGTGAGGGAGTTGGTGCTGTGTaGACTGTAGACACTGCCATT +
Preference number: 2 (lower is better)
Translates to: GHLDAVPFVQLRVARGGEGVGAV*TVDTAI
Trigger: AATGGCAGTGTCTACAGTGCACACAGCACCAACTCC...CTCACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAACAGCATCGAGGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAACCCCAGCACTGCAGTaGACCAACAACGGAGGGTTG +
Preference number: 2 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGTPALQ*TNNGGL
Trigger: CAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGGGT...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR TCA 90 bp GCTGGCTGTAGACCAGCGCCGCGGGCCTGCTGTAGGCGTACGAGCTGCCGATGTAGGCAGAGACATCCTTaGAGAAGACCTCCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: AGCRPAPRACCRRTSCRCRQRHP*RRPPPD
Trigger: ATCAGGAGGAGGTCTTCTTCAAGGATGTCTCTGCCT...ACATCGGCAGCTCGTACGCCTACAGCAGGCCCGCGGCGCTGGTCTACAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp CGGCCTGACGTGGTGAGGTCGGACTCCGACATGGAGGGCATCAGCAGCCCGTCTGTGCACTGTAGACACTaGCATTACGGATCCGACCGT +
Preference number: 2 (lower is better)
Translates to: RPDVVRSDSDMEGISSPSVHCRH*HYGSDR
Trigger: ACGGTCGGATCCGTAATGGCAGTGTCTACAGTGCAC...AGACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR TCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCGGCGGTCACAGGACTTaGATTCCCTGGGGACAGTGC +
Preference number: 2 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVGGHRT*IPWGQC
Trigger: GCACTGTCCCCAGGGAATTCAAGTCCTGTGACCGCC...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR GCA 90 bp GTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCACGTTTCCTTCAGCGTaGCGCCATTCAGACTGCGCC +
Preference number: 2 (lower is better)
Translates to: VCKYCKPDRPGQGKALETTFPSA*RHSDCA
Trigger: GGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGT...GGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR CCA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTCGGGTAGGGTGGGGGTaGCCGGTACACCTGCGTCCG +
Preference number: 2 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLRVGWG*PVHLRP
Trigger: CGGACGCAGGTGTACCGGCCACCCCCACCCTACCCG...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 90 bp CCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTaGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: PDRPGQGKALETKSS*STFPRLETPLQPVL
Trigger: AAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR TCA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTGGCTCGGTAGCGGCCTaGCGTGGTGAGGTCGGACTC +
Preference number: 2 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLGSVAA*RGEVGL
Trigger: GAGTCCGACCTCACCACGTCAGGCCGCTACCGAGCC...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACG +
Preference number: 2 (lower is better)
Translates to: KYCKPDRPGQGKALETKSVPVPR*VDQVST
Trigger: CGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR CCA 90 bp CCCTCCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACCTTGTGCAGCTGCGCGTaGCGCGCGGCGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: PSSSAVTIAIIAIPCSHTLCSCA*RAAVRG
Trigger: GCCCCTCACCGCCGCGCGCCACGCGCAGCTGCACAA...GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCCAGACGGTCCTCTCTTaGCCAGTAAGGAGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVQTVLS*PVRRCF
Trigger: GAAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTG...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCCAGTGCCACGCTGCGTaGATCAAGTGTCAACGGGAA +
Preference number: 2 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVQCHAA*IKCQRE
Trigger: TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTG...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR CCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAAACGGAGTAAGTCACTaGCGGTCACAGGACTTGAAT +
Preference number: 2 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGNGVSH*RSQDLN
Trigger: ATTCAAGTCCTGTGACCGCCAGTGACTTACTCCGTT...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR CCA 90 bp CCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCTGCTGTGGATTAGCATGGTGGAGACCTCCTCCTGATTaGGTTCACTGTGACAGTCTG +
Preference number: 2 (lower is better)
Translates to: PPRSPRPPPPRCCGLAWWRPPPD*VHCDSL
Trigger: CAGACTGTCACAGTGAACCCAATCAGGAGGAGGTCT...CCACCATGCTAATCCACAGCAGCGAGGAGGAGGAGGACGAGGACTTCGAGGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCTCCCTTGAGGTCTTCTaGACAGCCATGTTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVSLEVF*TAMFRP
Trigger: TGGCCTGAACATGGCTGTCCAGAAGACCTCAAGGGA...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACG +
Preference number: 2 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADVPVPR*VDQVST
Trigger: CGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGACCACAGCAATCTCTGTaGACAAATTTGGACTGTACT +
Preference number: 2 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGPQQSL*TNLDCT
Trigger: AGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGG...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAATTCTCTCTACCTCCTaGATGTACAGCATTTCAGCA +
Preference number: 2 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGILSTS*MYSISA
Trigger: TGCTGAAATGCTGTACATGCAGGAGGTAGAGAGAAT...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR TCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCGTCAACGGGAAAGTATaGGTTAGGCAAGCGCTTTTT +
Preference number: 2 (lower is better)
Translates to: KPDRPGQGKALETKSSLSVNGKV*VRQALF
Trigger: AAAAAGCGCTTGCCTAACTCATACTTTCCCGTTGAC...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR CCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCAACGCTTCACATGACTaGCCCCGTAAGAAATTGTGG +
Preference number: 2 (lower is better)
Translates to: SKMCASTANRTDRGRARPNASHD*PRKKLW
Trigger: CCACAATTTCTTACGGGGCCAGTCATGTGAAGCGTT...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR CCA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAAACGCTTCACATGACTaGCCCCGTAAGAAATTGTGG +
Preference number: 2 (lower is better)
Translates to: LRTFPSACRHSDCATYVPNASHD*PRKKLW
Trigger: CCACAATTTCTTACGGGGCCAGTCATGTGAAGCGTT...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
3UTR-3UTR TCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCGTCAACGGGAAAGTATaGGTTAGGCAAGCGCTTTTT +
Preference number: 2 (lower is better)
Translates to: SKMCASTANRTDRGRARPVNGKV*VRQALF
Trigger: AAAAAGCGCTTGCCTAACTCATACTTTCCCGTTGAC...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAAGGCAGAGTTAGGCTaGTGCACACACTATTTAGGA +
Preference number: 2 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVKAELG*CTHYLG
Trigger: TCCTAAATAGTGTGTGCACCAGCCTAACTCTGCCTT...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR CCA 90 bp CCCTCCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACCCACAGTCTCATAGTCTaGGGTGGGGCGGTAGGACGG +
Preference number: 2 (lower is better)
Translates to: PSSSAVTIAIIAIPCSHTHSLIV*GGAVGR
Trigger: CCGTCCTACCGCCCCACCCCAGACTATGAGACTGTG...GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR TCA 90 bp ACATCGGCGAGGGCTGCAAGTAGGGCTGAGGATTATTTAAGGAGTTGGTGCTGTTGTTTGAGGATGCATTaGGCTATGACGGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: TSARAASRAEDYLRSWCCCLRMH*AMTVPL
Trigger: CAGTGGCACCGTCATAGCTCAATGCATCCTCAAACA...ACAGCACCAACTCCTTAAATAATCCTCAGCCCTACTTGCAGCCCTCGCCGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp CCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCTGCTGTGGATTAGCATGGTGGACAAAGAGGTTATCTTaGGAAGAAGCATATGGTTCT +
Preference number: 2 (lower is better)
Translates to: PPRSPRPPPPRCCGLAWWTKRLS*EEAYGS
Trigger: AGAACCATATGCTTCTTCCCAAGATAACCTCTTTGT...CCACCATGCTAATCCACAGCAGCGAGGAGGAGGAGGACGAGGACTTCGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp ACATCGGCGAGGGCTGCAAGTAGGGCTGAGGATTATTTAAGGAGTTGGTGCTGTCCGTTGAGGTCAATCTaGGCTCTATCCAAGCTTGTC +
Preference number: 2 (lower is better)
Translates to: TSARAASRAEDYLRSWCCPLRSI*ALSKLV
Trigger: GACAAGCTTGGATAGAGCCCAGATTGACCTCAACGG...ACAGCACCAACTCCTTAAATAATCCTCAGCCCTACTTGCAGCCCTCGCCGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR TCA 90 bp CCCTCCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACCTACGGATCCGACCGTTaGGGTCAATCTGGGCTCTAT +
Preference number: 2 (lower is better)
Translates to: PSSSAVTIAIIAIPCSHTYGSDR*GQSGLY
Trigger: ATAGAGCCCAGATTGACCTCAACGGTCGGATCCGTA...GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR GCA 90 bp AAGAAGCATATGGTTCTGTATAATGTCCATTATAGTGCAACTGCGGTGGGGGAGGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACG +
Preference number: 2 (lower is better)
Translates to: KKHMVLYNVHYSATAVGEVPVPR*VDQVST
Trigger: CGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC...CTCCCCCACCGCAGTTGCACTATAATGGACATTATACAGAACCATATGCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CCA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTCTGGGGACAGTGCTGTaGGGTCCCCTGCTCGCCATC +
Preference number: 2 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFLGTVL*GPLLAI
Trigger: GATGGCGAGCAGGGGACCCCACAGCACTGTCCCCAG...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR TCA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTGCAGGGCAAGGCCCTTaGAACCAAGTCCTCCTTGAG +
Preference number: 2 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFAGQGP*NQVLLE
Trigger: CTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGC...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR GCA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTACGTTTCCTTCAGCGTaGCGCCATTCAGACTGCGCC +
Preference number: 2 (lower is better)
Translates to: TLMIARIAQHSFSKIENCTFPSA*RHSDCA
Trigger: GGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGT...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR GCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTAATGTGTGCAAGTACTaGAAACCGGACAGACCGGGG +
Preference number: 2 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASNVCKY*KPDRPG
Trigger: CCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR CAA 90 bp CAAAGTCACCAAAATCCGCTTGAACAGCTAAGCCTGCTAGCTGAATaGCTTGTTCTAAGGTACAAGGAATACTTCCTTCCAAGATATCTT +
Preference number: 2 (lower is better)
Translates to: QSHQNPLEQLSLLAE*LVLRYKEYFLPRYL
Trigger: AAGATATCTTGGAAGGAAGTATTCCTTGTACCTTAGAACAAGCAATTCAGCTAGCAGGCTTAGCTGTTCAAGCGGATTTTGGTGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 90 bp ATACTCTTAGTCCTTAATCTCTCCCAAAACGCTTCTCAGCGCCCATaGTTATTGTGTCATCTACAAAGCAACACATATATTAAAACTCAG +
Preference number: 2 (lower is better)
Translates to: ILLVLNLSQNASQRP*LLCHLQSNTYIKTQ
Trigger: CTGAGTTTTAATATATGTGTTGCTTTGTAGATGACACAATAACAATGGGCGCTGAGAAGCGTTTTGGGAGAGATTAAGGACTAAGAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR GCA 72 bp TCCGCGTCTGGGACGTGGGCCTTGGGCTCCAGGATGTaGAGGGGCCCGGCGAGCAGGACGCGAGGGCAGCCA +
Preference number: 3 (lower is better)
Translates to: SASGTWALGSRM*RGPASRTRGQP
Trigger: TGGCTGCCCTCGCGTCCTGCTCGCCGGGCCCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp TGGCTGAGCCCGGCCACCTCGATGCTGTTCCGTTTGTaGAGCTGCGCGTGGCGCGCGGCGGTGAGGGGCTCG +
Preference number: 3 (lower is better)
Translates to: WLSPATSMLFRL*SCAWRAAVRGS
Trigger: CGAGCCCCTCACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAACAGCATCGAGGTGGCCGGGCTCAGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp ATGGAGGGCATCAGCAGCCCGTCTCTCCAGGGCCGCTaGGCCTCTGCGGTCGTGCGGACGGGGCTGCTGTCC +
Preference number: 3 (lower is better)
Translates to: MEGISSPSLQGR*ASAVVRTGLLS
Trigger: GGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGGCTGCTGATGCCCTCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp GAACGGGCAGTGTGCGGCCGCTGGCGAGGGGAGCTGTaGGTGCTCGCGGATCTCGGGCTGGCTGTAGACCAG +
Preference number: 3 (lower is better)
Translates to: ERAVCGRWRGEL*VLADLGLAVDQ
Trigger: CTGGTCTACAGCCAGCCCGAGATCCGCGAGCACGCACAGCTCCCCTCGCCAGCGGCCGCACACTGCCCGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp GCCCGTCTCTCCAGGGCCGCTGGGCCTCTGCGGTCGTaGGGACGGGGCTGCTGTCCATCATCCTCTTCTCCG +
Preference number: 3 (lower is better)
Translates to: ARLSRAAGPLRS*GRGCCPSSSSP
Trigger: CGGAGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 72 bp CCGCCTCCTCCGGCCCTTCTCGCTGTGTCCTCTCGGTaGAAACGCTGGGCTGGGAGCCCACCGAGACGGCTC +
Preference number: 3 (lower is better)
Translates to: PPPPALLAVSSR*KRWAGSPPRRL
Trigger: GAGCCGTCTCGGTGGGCTCCCAGCCCAGCGTTTTCACCGAGAGGACACAGCGAGAAGGGCCGGAGGAGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp GCTGTGGAAGCTGTAGCTCAGGCTGAACGGGCAGTGTaGGGCCGCTGGCGAGGGGAGCTGTGCGTGCTCGCG +
Preference number: 3 (lower is better)
Translates to: AVEAVAQAERAV*GRWRGELCVLA
Trigger: CGCGAGCACGCACAGCTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGCCTGAGCTACAGCTTCCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp AGGGCCGCTGGGCCTCTGCGGTCGTGCGGACGGGGCTaGTGTCCATCATCCTCTTCTCCGCGTCTGGGACGT +
Preference number: 3 (lower is better)
Translates to: RAAGPLRSCGRG*CPSSSSPRLGR
Trigger: ACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp CATCAGCAGCCCGTCTCTCCAGGGCCGCTGGGCCTCTaGGGTCGTGCGGACGGGGCTGCTGTCCATCATCCT +
Preference number: 3 (lower is better)
Translates to: HQQPVSPGPLGL*GRADGAAVHHP
Trigger: AGGATGATGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGGCTGCTGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp TCCTGCAGCGAGTGCGCCACGGGCAGGCTGTCCTCCTaGAACGTTTGCACCGAGTGGTGCACGCGCCGCGTG +
Preference number: 3 (lower is better)
Translates to: SCSECATGRLSS*NVCTEWCTRRV
Trigger: CACGCGGCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCCCGTGGCGCACTCGCTGCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp AGGGTGCGCTCCTTGAGCCGCAGGCCCTCCAGGCCGTaGCTGAGCCCGGCCACCTCGATGCTGTTCCGTTTG +
Preference number: 3 (lower is better)
Translates to: RVRSLSRRPSRP*LSPATSMLFRL
Trigger: CAAACGGAACAGCATCGAGGTGGCCGGGCTCAGCCACGGCCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CAA 90 bp CGGCCTGACGTGGTGAGGTCGGACTCCGACATGGAGGGCATCAGCAGCCCGTCTGATAGGGTGCGCTCCTaGAGCCGCAGGCCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: RPDVVRSDSDMEGISSPSDRVRS*SRRPSR
Trigger: CCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTATC...AGACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 72 bp GGTAGGGAGACGGGCTGTGGAAGCTGTAGCTCAGGCTaGACGGGCAGTGTGCGGCCGCTGGCGAGGGGAGCT +
Preference number: 3 (lower is better)
Translates to: GRETGCGSCSSG*TGSVRPLARGA
Trigger: AGCTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGCCTGAGCTACAGCTTCCACAGCCCGTCTCCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 72 bp GAGAGTCCCTCCGGGCTCGGTAGCGGCCTGACGTGGTaGGGTCGGACTCCGACATGGAGGGCATCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: ESPSGLGSGLTW*GRTPTWRASAA
Trigger: GGCTGCTGATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCGCTACCGAGCCCGGAGGGACTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp CCTTCTCGCTGTGTCCTCTCGGTGAAAACGCTGGGCTaGGAGCCCACCGAGACGGCTCGCGGCGCCACCTCT +
Preference number: 3 (lower is better)
Translates to: PSRCVLSVKTLG*EPTETARGATS
Trigger: AGAGGTGGCGCCGCGAGCCGTCTCGGTGGGCTCCCAGCCCAGCGTTTTCACCGAGAGGACACAGCGAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp CTGCTGTCCATCATCCTCTTCTCCGCGTCTGGGACGTaGGCCTTGGGCTCCAGGATGTGCAGGGGCCCGGCG +
Preference number: 3 (lower is better)
Translates to: LLSIILFSASGT*ALGSRMCRGPA
Trigger: CGCCGGGCCCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp GGCAGGCTGTCCTCCTGGAACGTTTGCACCGAGTGGTaGACGCGCCGCGTGATGAGGTCGGGGTTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GRLSSWNVCTEW*TRRVMRSGLLL
Trigger: CAGCAGCAACCCCGACCTCATCACGCGGCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp ACGGGCAGGCTGTCCTCCTGGAACGTTTGCACCGAGTaGTGCACGCGCCGCGTGATGAGGTCGGGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: TGRLSSWNVCTE*CTRRVMRSGLL
Trigger: CAGCAACCCCGACCTCATCACGCGGCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp GACGGGGCTGCTGTCCATCATCCTCTTCTCCGCGTCTaGGACGTGGGCCTTGGGCTCCAGGATGTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: DGAAVHHPLLRV*DVGLGLQDVQG
Trigger: CCCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 72 bp CCGCGGGCCTGCTGTAGGCGTACGAGCTGCCGATGTTaGGGTTTCGCAGCGAGTGGCTCTGCCGTTCCGCAT +
Preference number: 3 (lower is better)
Translates to: PRACCRRTSCRC*GFAASGSAVPH
Trigger: ATGCGGAACGGCAGAGCCACTCGCTGCGAAACCTCAACATCGGCAGCTCGTACGCCTACAGCAGGCCCGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 72 bp TTTCTTCAGAGAGTCCCTCCGGGCTCGGTAGCGGCCTaGCGTGGTGAGGTCGGACTCCGACATGGAGGGCAT +
Preference number: 3 (lower is better)
Translates to: FLQRVPPGSVAA*RGEVGLRHGGH
Trigger: ATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCGCTACCGAGCCCGGAGGGACTCTCTGAAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTaGGCCACTTACGTCCCAGTGCCACGCTGCGTGGAT +
Preference number: 3 (lower is better)
Translates to: LRTFPSACRHSD*ATYVPVPRCVD
Trigger: ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
3UTR-3UTR CAA 90 bp TTCTTCCCAGAGAGAAGGTCCGACACCGGCCTTTTCTTCAGAGAGTCCCTCCGGTCGATGCTGTTCCGTTaGTGCAGCTGCGCGTGGCGC +
Preference number: 3 (lower is better)
Translates to: FFPERRSDTGLFFRESLRSMLFR*CSCAWR
Trigger: GCGCCACGCGCAGCTGCACAAACGGAACAGCATCGA...CCGGAGGGACTCTCTGAAGAAAAGGCCGGTGTCGGACCTTCTCTCTGGGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 72 bp AGTGGCTCTGCCGTTCCGCATGCACCAGGCCCCTGTTaGGCTGCTTCATCACAGTCTCATAGTCTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: SGSAVPHAPGPC*AASSQSHSLGW
Trigger: CCACCCCAGACTATGAGACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGCATGCGGAACGGCAGAGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp CGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTaGCACGCTGCGTGGATCAAGTGTCAACGGGAAAGT +
Preference number: 3 (lower is better)
Translates to: RAAIQTAPLTSQ*HAAWIKCQRES
Trigger: ACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
3UTR GCA 72 bp CCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTaGCGCCATTCAGACTGCGCCACTTACGTCCCAGTG +
Preference number: 3 (lower is better)
Translates to: PLQPVLRTFPSA*RHSDCATYVPV
Trigger: CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
3UTR GCA 72 bp TTGAGGTTTCGCAGCGAGTGGCTCTGCCGTTCCGCATaGACCAGGCCCCTGTTGAGCTGCTTCATCACAGTC +
Preference number: 3 (lower is better)
Translates to: LRFRSEWLCRSA*TRPLLSCFITV
Trigger: GACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGCATGCGGAACGGCAGAGCCACTCGCTGCGAAACCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp GGACAGCCATGTTCAGGCCAGTCTGTGTATTGGAGGTaGCAGACGGTCCTCTCTTGCCCAGTAAGGAGGTGC +
Preference number: 3 (lower is better)
Translates to: GQPCSGQSVYWR*QTVLSCPVRRC
Trigger: GCACCTCCTTACTGGGCAAGAGAGGACCGTCTGGCACCTCCAATACACAGACTGGCCTGAACATGGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp CAGTCTGTGTATTGGAGGTGCCAGACGGTCCTCTCTTaGCCAGTAAGGAGGTGCTTCATCTTCAGGCCTGTG +
Preference number: 3 (lower is better)
Translates to: QSVYWRCQTVLS*PVRRCFIFRPV
Trigger: CACAGGCCTGAAGATGAAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTGGCACCTCCAATACACAGACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp TACTGGCAGAGAGTCTGCACCAGCATCATTCTCTGTTaGCTCAGCATGTCCAGCACTCTCGGGATGTCCAGC +
Preference number: 3 (lower is better)
Translates to: YWQRVCTSIILC*LSMSSTLGMSS
Trigger: GCTGGACATCCCGAGAGTGCTGGACATGCTGAGGCAACAGAGAATGATGCTGGTGCAGACTCTCTGCCAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp CTACCCCAGCACTGCAGTGGACCAACAACGGAGGGTTaGGGCTTTGGGGATCACTTGTGCTATTTGTATGGC +
Preference number: 3 (lower is better)
Translates to: LPQHCSGPTTEG*GFGDHLCYLYG
Trigger: GCCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CAA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTTACGAGCTGCCGATGTaGAGGTTTCGCAGCGAGTGG +
Preference number: 3 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLYELPM*RFRSEW
Trigger: CCACTCGCTGCGAAACCTCAACATCGGCAGCTCGTA...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp TCCATAGGTGACAGTGTTGTGCCTGGAACCAAGTCGTaGCCAGTACCTAAAGCTCTTCTCCCTTCCACCCTC +
Preference number: 3 (lower is better)
Translates to: SIGDSVVPGTKS*PVPKALLPSTL
Trigger: GAGGGTGGAAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGTCACCTATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CAA 90 bp GGCATAGCAGCCAGAGTCTGTGCGGAACCGGGTCGTGATCTTAAACCTTCCATACCACCGGCGCTGATTTaGCTTGTTGTAGTACCAGAG +
Preference number: 3 (lower is better)
Translates to: GIAARVCAEPGRDLKPSIPPALI*LVVVPE
Trigger: CTCTGGTACTACAACAAGCAAAATCAGCGCCGGTGG...TATGGAAGGTTTAAGATCACGACCCGGTTCCGCACAGACTCTGGCTGCTATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 72 bp GTGCACTGTAGACACTGCCATTACGGATCCGACCGTTaGGGTCAATCTGGGCTCTATCCAAGCTTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: VHCRHCHYGSDR*GQSGLYPSLSE
Trigger: CTCAGACAAGCTTGGATAGAGCCCAGATTGACCTCAACGGTCGGATCCGTAATGGCAGTGTCTACAGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACGGGAAAGTATGAGTTA +
Preference number: 3 (lower is better)
Translates to: HSDCATYVPVPR*VDQVSTGKYEL
Trigger: TAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
3UTR GCA 72 bp GGTGGTTGGTTTCTGGGTAAGGCAGAGTTAGGCTGGTaGACACACTATTTAGGAAGTCCTGTCTCGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GGWFLGKAELGW*THYLGSPVSWL
Trigger: CAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCCTTACCCAGAAACCAACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR CCA 72 bp TGGTTCTGTATAATGTCCATTATAGTGCAACTGCGGTaGGGGAGGCATCACGTAGGGCTGGGGTTTAGGCAG +
Preference number: 3 (lower is better)
Translates to: WFCIMSIIVQLR*GRHHVGLGFRQ
Trigger: CTGCCTAAACCCCAGCCCTACGTGATGCCTCCCCCACCGCAGTTGCACTATAATGGACATTATACAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp CCAACAACGGAGGGTTGGGGCTTTGGGGATCACTTGTaGTATTTGTATGGCGTCGAACAGACTGGATCTCTT +
Preference number: 3 (lower is better)
Translates to: PTTEGWGFGDHL*YLYGVEQTGSL
Trigger: AAGAGATCCAGTCTGTTCGACGCCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp GGAAAGGGTTCCTCAGCTAAATATCCCACTCATCCATaGCTACTCAGCGGTCACTGTGACAAGGCCATCTTA +
Preference number: 3 (lower is better)
Translates to: GKGSSAKYPTHP*LLSGHCDKAIL
Trigger: TAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR GCA 72 bp GCTGCAAGTAGGGCTGAGGATTATTTAAGGAGTTGGTaGTGTGTGCACTGTAGACACTGCCATTACGGATCC +
Preference number: 3 (lower is better)
Translates to: AASRAEDYLRSW*CVHCRHCHYGS
Trigger: GGATCCGTAATGGCAGTGTCTACAGTGCACACAGCACCAACTCCTTAAATAATCCTCAGCCCTACTTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR GCA 72 bp AGGACTCTGTACACAAATGTGTACTGGCAGAGAGTCTaGACCAGCATCATTCTCTGTTGCCTCAGCATGTCC +
Preference number: 3 (lower is better)
Translates to: RTLYTNVYWQRV*TSIILCCLSMS
Trigger: GGACATGCTGAGGCAACAGAGAATGATGCTGGTGCAGACTCTCTGCCAGTACACATTTGTGTACAGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp TTAGGTGGTTGGTTTCTGGGTAAGGCAGAGTTAGGCTaGTGCACACACTATTTAGGAAGTCCTGTCTCGTGG +
Preference number: 3 (lower is better)
Translates to: LGGWFLGKAELG*CTHYLGSPVSW
Trigger: CCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCCTTACCCAGAAACCAACCACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR CCA 72 bp AGGGCTGCAAGTAGGGCTGAGGATTATTTAAGGAGTTaGTGCTGTGTGCACTGTAGACACTGCCATTACGGA +
Preference number: 3 (lower is better)
Translates to: RAASRAEDYLRS*CCVHCRHCHYG
Trigger: TCCGTAATGGCAGTGTCTACAGTGCACACAGCACCAACTCCTTAAATAATCCTCAGCCCTACTTGCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CAA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACAACCACCCTAGGCAATaGTTTTTCACTTCATTTTCA +
Preference number: 3 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADNHPRQ*FFTSFS
Trigger: TGAAAATGAAGTGAAAAACAATTGCCTAGGGTGGTT...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR CCA 72 bp GGGTTGGGGCTTTGGGGATCACTTGTGCTATTTGTATaGCGTCGAACAGACTGGATCTCTTCAAGATATGAT +
Preference number: 3 (lower is better)
Translates to: GLGLWGSLVLFV*RRTDWISSRYD
Trigger: ATCATATCTTGAAGAGATCCAGTCTGTTCGACGCCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CAA 90 bp TTCAAGACACGCTCCAATGGATATGTCACTTCCTTGGCTATCCTTAGCAGGGTAAGCCTGCTAGCTGAATaGCTTGTTCTAAGGTACAAG +
Preference number: 3 (lower is better)
Translates to: FKTRSNGYVTSLAILSRVSLLAE*LVLRYK
Trigger: CTTGTACCTTAGAACAAGCAATTCAGCTAGCAGGCT...TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR TCA 72 bp CTGATACCTGGTAATCTCCTGCTGCAGCTGAGAAACTaGAGGCACATAAAACACCACTCCAAAATAGACGGT +
Preference number: 3 (lower is better)
Translates to: LIPGNLLLQLRN*RHIKHHSKIDG
Trigger: ACCGTCTATTTTGGAGTGGTGTTTTATGTGCCTTCAGTTTCTCAGCTGCAGCAGGAGATTACCAGGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR-3UTR CAA 90 bp TGCAAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACCAGCGCCCATTGTTATaGTGTCATCTACAAAGCAAC +
Preference number: 3 (lower is better)
Translates to: CKYLLNTTAISVHKFGLYQRPLL*CHLQSN
Trigger: GTTGCTTTGTAGATGACACAATAACAATGGGCGCTG...GTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR CAA 90 bp AAGAAGCATATGGTTCTGTATAATGTCCATTATAGTGCAACTGCGGTGGGGGAGAGGCCACTTTTTGGGTaGCTTCTTCCAATACTTTTT +
Preference number: 3 (lower is better)
Translates to: KKHMVLYNVHYSATAVGERPLFG*LLPILF
Trigger: AAAAAGTATTGGAAGAAGCAACCCAAAAAGTGGCCT...CTCCCCCACCGCAGTTGCACTATAATGGACATTATACAGAACCATATGCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CCA 72 bp CCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTaGACTGTACTTTTTGGGAGAAGAGGTGAAAACTAT +
Preference number: 3 (lower is better)
Translates to: PLEYHSNLCAQI*TVLFGRRGENY
Trigger: ATAGTTTTCACCTCTTCTCCCAAAAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR-3UTR CAA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCACCTAGATTTGACATTTaGGAAGTTCACTGTAAGAAG +
Preference number: 3 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKAPRFDI*EVHCKK
Trigger: CTTCTTACAGTGAACTTCCAAAATGTCAAATCTAGG...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR CAA 72 bp GCCACCTCTGCCGCCGACGCGGATAGGGTGCGCTCCTaGAGCCGCAGGCCCTCCAGGCCGTGGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ATSAADADRVRS*SRRPSRPWLSP
Trigger: CGGGCTCAGCCACGGCCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTATCCGCGTCGGCGGCAGAGGTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp CCCGTCTCTCCAGGGCCGCTGGGCCTCTGCGGTCGTGCGGACGGGGCTGCTGTCGGGACAGGTCTGGCGTaGTGTTGGCGGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PVSPGPLGLCGRADGAAVGTGLA*CWRAWG
Trigger: CCCCCAGGCCCGCCAACAGCACGCCAGACCTGTCCC...GACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 72 bp CCGTGGCTGAGCCCGGCCACCTCGATGCTGTTCCGTTaGTGCAGCTGCGCGTGGCGCGCGGCGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PWLSPATSMLFR*CSCAWRAAVRG
Trigger: GCCCCTCACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAACAGCATCGAGGTGGCCGGGCTCAGCCACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp CACGCTGACCGCGCCCACCACGGGCCGCCGCTCGGCAGGGTAGGGGTAGGGAGAGCCTCGAGGCTTTCCTaGCCAGTGCTCTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: HADRAHHGPPLGRVGVGRASRLS*PVLSTD
Trigger: GTCCGTGGAGAGCACTGGCCAGGAAAGCCTCGAGGC...TCTCCCTACCCCTACCCTGCCGAGCGGCGGCCCGTGGTGGGCGCGGTCAGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGACCTCCAGGCCGTGGCTaGGCCCGGCCACCTCGATGC +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGPPGRG*ARPPRC
Trigger: GCATCGAGGTGGCCGGGCTCAGCCACGGCCTGGAGG...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GGAGCTGTGCGTGCTCGCGGATCTCGGGCTGGCTGTAGACCAGCGCCGCGGGCCGGTGGCCGGTACACCTaGGTCCGCATGATGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GAVRARGSRAGCRPAPRAGGRYT*VRMMLG
Trigger: TCCCAACATCATGCGGACGCAGGTGTACCGGCCACC...GGCCCGCGGCGCTGGTCTACAGCCAGCCCGAGATCCGCGAGCACGCACAGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCGCACCAGGCCCCTGTTaGGCTGCTTCATCACAGTCT +
Preference number: 4 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRAPGPC*AASSQS
Trigger: AGACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGC...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGGCTGAACGGGCAGTGTaGGGCCGCTGGCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAAAERAV*GRWRGE
Trigger: CTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGC...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGCTGAACGGGCAGTGTaGGGCCGCTGGCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCAERAV*GRWRGE
Trigger: CTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGC...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCGGGTAGGGTGGGGGTaGCCGGTACACCTGCGTCCG +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDRVGWG*PVHLRP
Trigger: CGGACGCAGGTGTACCGGCCACCCCCACCCTACCCG...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGAGGCCCTCCAGGCCGTaGCTGAGCCCGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLRPSRP*LSPATS
Trigger: CGAGGTGGCCGGGCTCAGCCACGGCCTGGAGGGCCT...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCTCTCCAGGGCCGCTaGGCCTCTGCGGTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGSLQGR*ASAVVR
Trigger: CCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GGCCACCTCGATGCTGTTCCGTTTGTGCAGCTGCGCGTGGCGCGCGGCGGTGAGGGTCGGACTCCGACATaGAGGGCATCAGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GHLDAVPFVQLRVARGGEGRTPT*RASAAR
Trigger: ACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACC...CTCACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAACAGCATCGAGGTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCACCCCAGCACTGCAGTaGACCAACAACGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRTPALQ*TNNGGL
Trigger: CAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGGGT...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 72 bp TCCATCATCCTCTTCTCCGCGTCTGGGACGTGGGCCTaGGGCTCCAGGATGTGCAGGGGCCCGGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SIILFSASGTWA*GSRMCRGPASR
Trigger: CCTGCTCGCCGGGCCCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp TCCGCCTCCTCCGGCCCTTCTCGCTGTGTCCTCTCGGTGAAAACGCTGGGCTGGAGCTGTAGCTCAGGCTaGACGGGCAGTGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SASSGPSRCVLSVKTLGWSCSSG*TGSVRP
Trigger: CGGCCGCACACTGCCCGTTCAGCCTGAGCTACAGCT...CCAGCCCAGCGTTTTCACCGAGAGGACACAGCGAGAAGGGCCGGAGGAGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAACCTCCAGGCCGTGGCTaGGCCCGGCCACCTCGATGC +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQPPGRG*ARPPRC
Trigger: GCATCGAGGTGGCCGGGCTCAGCCACGGCCTGGAGG...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGTCCGGCCTCCAGCTaGTCACCCAGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAACPASS*SPSSRC
Trigger: GCAGCGGCTGCTGGGTGAGCAGCTGGAGGCCGGACA...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATGTCCGGCCTCCAGCTaGTCACCCAGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGCPASS*SPSSRC
Trigger: GCAGCGGCTGCTGGGTGAGCAGCTGGAGGCCGGACA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GACGGGGCTGCTGTCCATCATCCTCTTCTCCGCGTCTGGGACGTGGGCCTTGGGTCCTGCGCCTGCAGCTaGGCATTGGTCAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: DGAAVHHPLLRVWDVGLGSCACS*ALVSSG
Trigger: GCCGGAGCTGACCAATGCGCAGCTGCAGGCGCAGGA...CCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGGACAGGTCTGGCGTaGTGTTGGCGGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRGTGLA*CWRAWG
Trigger: CCCCCAGGCCCGCCAACAGCACGCCAGACCTGTCCC...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCACCTCCTGCAGCGAGTaGGCCACGGGCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCTSCSE*ATGRLS
Trigger: GGACAGCCTGCCCGTGGCGCACTCGCTGCAGGAGGT...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCTGCTGTTGGCGGGCCTaGGGGGCGGGTAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KPDRPGQGKALETKSSLSCCWRA*GAGRVG
Trigger: CCCCACCCTACCCGCCCCCCAGGCCCGCCAACAGCA...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCCCTCCAGGCCGTGGCTaGGCCCGGCCACCTCGATGC +
Preference number: 4 (lower is better)
Translates to: KYCKPDRPGQGKALETKSPPGRG*ARPPRC
Trigger: GCATCGAGGTGGCCGGGCTCAGCCACGGCCTGGAGG...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp GACGGGGCTGCTGTCCATCATCCTCTTCTCCGCGTCTGGGACGTGGGCCTTGGGGCTGTGTCCTCTCGGTaGAAACGCTGGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DGAAVHHPLLRVWDVGLGAVSSR*KRWAGS
Trigger: GCTCCCAGCCCAGCGTTTTCACCGAGAGGACACAGC...CCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp GGAGCTGTGCGTGCTCGCGGATCTCGGGCTGGCTGTAGACCAGCGCCGCGGGCCCCAGGCAGGCGATCATaGTCTCCGACAAAATCACCA +
Preference number: 4 (lower is better)
Translates to: GAVRARGSRAGCRPAPRAPGRRS*SPTKSP
Trigger: TGGTGATTTTGTCGGAGATCATGATCGCCTGCCTGG...GGCCCGCGGCGCTGGTCTACAGCCAGCCCGAGATCCGCGAGCACGCACAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCCCAGCGCCGCGGGCCTaGTGTAGGCGTACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRPAPRA*CRRTSC
Trigger: GCAGCTCGTACGCCTACAGCAGGCCCGCGGCGCTGG...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACCCAGCGCCGCGGGCCTaGTGTAGGCGTACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHPAPRA*CRRTSC
Trigger: GCAGCTCGTACGCCTACAGCAGGCCCGCGGCGCTGG...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGCTGAACGGGCAGTGTaGGGCCGCTGGCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQAERAV*GRWRGE
Trigger: CTCCCCTCGCCAGCGGCCGCACACTGCCCGTTCAGC...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGGCTCGCTGACCTCCTaGAGCGAGTGCGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQGSLTS*SECATG
Trigger: GCCCGTGGCGCACTCGCTGCAGGAGGTCAGCGAGCC...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGGGCTCGCTGACCTCCTaGAGCGAGTGCGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATGSLTS*SECATG
Trigger: GCCCGTGGCGCACTCGCTGCAGGAGGTCAGCGAGCC...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTTTCCGTTTGTGCAGCTaGGCGTGGCGCGCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRFRLCS*AWRAAV
Trigger: CACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAA...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CGGCCTGACGTGGTGAGGTCGGACTCCGACATGGAGGGCATCAGCAGCCCGTCTCCAGGCAACTCTTGCTaGACACCGTGTAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RPDVVRSDSDMEGISSPSPGNSC*TPCSAG
Trigger: CCCGGCGCTACACGGTGTCCAGCAAGAGTTGCCTGG...AGACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAATGCTGTTGGCGGGCCTaGGGGGCGGGTAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQRECCWRA*GAGRVG
Trigger: CCCCACCCTACCCGCCCCCCAGGCCCGCCAACAGCA...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGTGGCGGGACAGGTCTaGCGTGCTGTTGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRVAGQV*RAVGGP
Trigger: AGGCCCGCCAACAGCACGCCAGACCTGTCCCGCCAC...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCTTGTGCAGCTGCGCGTaGCGCGCGGCGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVLCSCA*RAAVRG
Trigger: GCCCCTCACCGCCGCGCGCCACGCGCAGCTGCACAA...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCTTGTGCAGCTGCGCGTaGCGCGCGGCGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVLCSCA*RAAVRG
Trigger: GCCCCTCACCGCCGCGCGCCACGCGCAGCTGCACAA...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACGCCGCGGCGCGCTCATaGGGCTCGCACGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHAAARS*GSHASL
Trigger: AAGTGAGGCGTGCGAGCCCCATGAGCGCGCCGCGGC...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556564.6
CDS-3UTR TCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGGCTCGGTAGCGGCCTaGCGTGGTGAGGTCGGACTC +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHGSVAA*RGEVGL
Trigger: GAGTCCGACCTCACCACGTCAGGCCGCTACCGAGCC...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCGAGGGGAGCTGTGCGTaGTCGCGGATCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VCKYCKPDRPGQGKALETEGSCA*SRISGW
Trigger: CCAGCCCGAGATCCGCGAGCACGCACAGCTCCCCTC...GGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCTGGCGAGGGGAGCTGTaGGTGCTCGCGGATCTCGGG +
Preference number: 4 (lower is better)
Translates to: KPDRPGQGKALETKSSLSWRGEL*VLADLG
Trigger: CCCGAGATCCGCGAGCACGCACAGCTCCCCTCGCCA...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTTCCGTTTGTGCAGCTaGGCGTGGCGCGCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRFRLCS*AWRAAV
Trigger: CACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAA...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCTGCTGTGGATTAGCATGGTGGTTCCGTTTGTGCAGCTaGGCGTGGCGCGCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PPRSPRPPPPRCCGLAWWFRLCS*AWRAAV
Trigger: CACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAA...CCACCATGCTAATCCACAGCAGCGAGGAGGAGGAGGACGAGGACTTCGAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCGGGCCTCTGCGGTCGTaGGGACGGGGCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVGPLRS*GRGCCP
Trigger: TGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCC...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GCTGGCTGTAGACCAGCGCCGCGGGCCTGCTGTAGGCGTACGAGCTGCCGATGTCCACTTACGTCCCAGTaGCACGCTGCGTGGATCAAG +
Preference number: 4 (lower is better)
Translates to: AGCRPAPRACCRRTSCRCPLTSQ*HAAWIK
Trigger: CTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG...ACATCGGCAGCTCGTACGCCTACAGCAGGCCCGCGGCGCTGGTCTACAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp GGCCACCTCGATGCTGTTCCGTTTGTGCAGCTGCGCGTGGCGCGCGGCGGTGAGCCCCTCTTCAGCCTGTaGTTCGCACGTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GHLDAVPFVQLRVARGGEPLFSL*FARFLQ
Trigger: CTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGG...CTCACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAACAGCATCGAGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCAGACCTCCTCCTGATTaGGTTCACTGTGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRRPPPD*VHCDSL
Trigger: CAGACTGTCACAGTGAACCCAATCAGGAGGAGGTCT...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCGCAGTGTGCGGCCGCTaGCGAGGGGAGCTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVAVCGR*RGELCV
Trigger: CACGCACAGCTCCCCTCGCCAGCGGCCGCACACTGC...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGGTGGCGGGACAGGTCTaGCGTGCTGTTGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATVAGQV*RAVGGP
Trigger: AGGCCCGCCAACAGCACGCCAGACCTGTCCCGCCAC...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGAAAACGCTGGGCTaGGAGCCCACCGAGACGGCT +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCVKTLG*EPTETA
Trigger: AGCCGTCTCGGTGGGCTCCCAGCCCAGCGTTTTCAC...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCCTCTTCTCCGCGTCTaGGACGTGGGCCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLPLLRV*DVGLGL
Trigger: GAGCCCAAGGCCCACGTCCCAGACGCGGAGAAGAGG...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCTCTCTCCAGGGCCGCTaGGCCTCTGCGGTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVSLQGR*ASAVVR
Trigger: CCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGA...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCACGAGCTGCCGATGTTaGGGTTTCGCAGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCTSCRC*GFAASG
Trigger: GCCACTCGCTGCGAAACCTCAACATCGGCAGCTCGT...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAATAGGGTGCGCTCCTTaGGCCGCAGGCCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQREIGCAP*AAGPPG
Trigger: GCCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTAT...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGGCTGTGTCCTCTCGGTaGAAACGCTGGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLAVSSR*KRWAGS
Trigger: GCTCCCAGCCCAGCGTTTTCACCGAGAGGACACAGC...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACCGCAGCGAGTGGCTCTaGCGTTCCGCATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHRSEWL*RSACTR
Trigger: CCTGGTGCATGCGGAACGGCAGAGCCACTCGCTGCG...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCCGCAGCGAGTGGCTCTaGCGTTCCGCATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: VCKYCKPDRPGQGKALETRSEWL*RSACTR
Trigger: CCTGGTGCATGCGGAACGGCAGAGCCACTCGCTGCG...GGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAGGGACAGGTCTGGCGTaGTGTTGGCGGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NVCKYCKPDRPGQGKALEGTGLA*CWRAWG
Trigger: CCCCCAGGCCCGCCAACAGCACGCCAGACCTGTCCC...TTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCGGGCCTCTGCGGTCGTaGGGACGGGGCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRLETPLQPVLRTFPSACGPLRS*GRGCCP
Trigger: TGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCC...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCAGCATCATTCTCTGTTaGCTCAGCATGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRSIILC*LSMSST
Trigger: AGTGCTGGACATGCTGAGGCAACAGAGAATGATGCT...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCCAAGACACGCTCCAATaGATATGTCACTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRQDTLQ*ICHFLG
Trigger: GCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTG...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCCACAGTCTCATAGTCTaGGGTGGGGCGGTAGGACGG +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCHSLIV*GGAVGR
Trigger: CCGTCCTACCGCCCCACCCCAGACTATGAGACTGTG...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCTGCTGTTGGCGGGCCTaGGGGGCGGGTAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGCCWRA*GAGRVG
Trigger: CCCCACCCTACCCGCCCCCCAGGCCCGCCAACAGCA...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCTCTCTCCAGGGCCGCTaGGCCTCTGCGGTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: PRLETPLQPVLRTFPSACSLQGR*ASAVVR
Trigger: CCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGA...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCTACACAAATGTGTACTaGCAGAGAGTCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRYTNVY*QRVCTS
Trigger: GCTGGTGCAGACTCTCTGCCAGTACACATTTGTGTA...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCCCAACCCAGCGCTGGTaGCGCCAGGAGAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPPTQRW*RQEKAI
Trigger: GATCGCTTTCTCCTGGCGTCACCAGCGCTGGGTTGG...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCCCAACCCAGCGCTGGTaGCGCCAGGAGAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: KPDRPGQGKALETKSSLSPTQRW*RQEKAI
Trigger: GATCGCTTTCTCCTGGCGTCACCAGCGCTGGGTTGG...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp GCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTAGCTGTAGCTCAGGCTaGACGGGCAGTGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ASTANRTDRGRARPLKPSSCSSG*TGSVRP
Trigger: CGGCCGCACACTGCCCGTTCAGCCTGAGCTACAGCT...ACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAGCTGTAGCTCAGGCTaGACGGGCAGTGTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVSCSSG*TGSVRP
Trigger: CGGCCGCACACTGCCCGTTCAGCCTGAGCTACAGCT...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTCGGGGTTGCTGCTGCTaGTGTAAAGGTGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRRGCCC*CKGGGT
Trigger: TGTCCCGCCACCTTTACATCAGCAGCAGCAACCCCG...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTAGCGGCCTGACGTGGTaGGGTCGGACTCCGACATGG +
Preference number: 4 (lower is better)
Translates to: ASTANRTDRGRARPLKPSSGLTW*GRTPTW
Trigger: CCATGTCGGAGTCCGACCTCACCACGTCAGGCCGCT...ACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCGTCAACGGGAAAGTATaGGTTAGGCAAGCGCTTTTT +
Preference number: 4 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRVNGKV*VRQALF
Trigger: AAAAAGCGCTTGCCTAACTCATACTTTCCCGTTGAC...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp GACGGGGCTGCTGTCCATCATCCTCTTCTCCGCGTCTGGGACGTGGGCCTTGGGCCGTGTAGCGCCGGGTaGGTTTCAGTTTCAACCCAA +
Preference number: 4 (lower is better)
Translates to: DGAAVHHPLLRVWDVGLGPCSAG*VSVSTQ
Trigger: TTGGGTTGAAACTGAAACGCACCCGGCGCTACACGG...CCCAAGGCCCACGTCCCAGACGCGGAGAAGAGGATGATGGACAGCAGCCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAACCAGGCAACTCTTaGTGGACACCGTGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDQPGNS*WTPCSA
Trigger: GGCGCTACACGGTGTCCAGCAAGAGTTGCCTGGTTG...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp AATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAGAGGGGAGCTGTGCGTaGTCGCGGATCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NVCKYCKPDRPGQGKALEEGSCA*SRISGW
Trigger: CCAGCCCGAGATCCGCGAGCACGCACAGCTCCCCTC...TTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGATGGCGAGGGGAGCTGTaGGTGCTCGCGGATCTCGGG +
Preference number: 4 (lower is better)
Translates to: NPSSACASHVSFSVPPFRWRGEL*VLADLG
Trigger: CCCGAGATCCGCGAGCACGCACAGCTCCCCTCGCCA...TCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCATCCTGCGCCTGCAGCTaGGCATTGGTCAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LRTFPSACRHSDCATYVPSCACS*ALVSSG
Trigger: GCCGGAGCTGACCAATGCGCAGCTGCAGGCGCAGGA...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCGTTTGCACCGAGTGGTaGACGCGCCGCGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: KPDRPGQGKALETKSSLSVCTEW*TRRVMR
Trigger: CCTCATCACGCGGCGCGTGCACCACTCGGTGCAAAC...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACCTCCTGCAGCGAGTaGGCCACGGGCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSTSCSE*ATGRLS
Trigger: GGACAGCCTGCCCGTGGCGCACTCGCTGCAGGAGGT...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGCCCGGCCACCTCGATaGTGTTCCGTTTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRARPPR*CSVCAA
Trigger: AGCTGCACAAACGGAACAGCATCGAGGTGGCCGGGC...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACG +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGVPVPR*VDQVST
Trigger: CGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATACGTTTCCTTCAGCGTaGCGCCATTCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDTFPSA*RHSDCA
Trigger: GGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGT...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCCCAGGCAACTCTTGCTaGACACCGTGTAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPPGNSC*TPCSAG
Trigger: CCCGGCGCTACACGGTGTCCAGCAAGAGTTGCCTGG...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACGCCTCGAGGCTTTCCTaGCCAGTGCTCTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHASRLS*PVLSTD
Trigger: GTCCGTGGAGAGCACTGGCCAGGAAAGCCTCGAGGC...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCCTCGAGGCTTTCCTaGCCAGTGCTCTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHASRLS*PVLSTD
Trigger: GTCCGTGGAGAGCACTGGCCAGGAAAGCCTCGAGGC...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTAACGTTTGCACCGAGTaGTGCACGCGCCGCGTGATG +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRNVCTE*CTRRVM
Trigger: CATCACGCGGCGCGTGCACCACTCGGTGCAAACGTT...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCGTGAAAACGCTGGGCTaGGAGCCCACCGAGACGGCT +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRVKTLG*EPTETA
Trigger: AGCCGTCTCGGTGGGCTCCCAGCCCAGCGTTTTCAC...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGAAAACGCTGGGCTaGGAGCCCACCGAGACGGCT +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQVKTLG*EPTETA
Trigger: AGCCGTCTCGGTGGGCTCCCAGCCCAGCGTTTTCAC...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAACTGGGACGTGGGCCTTaGGCTCCAGGATGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQRELGRGP*APGCAG
Trigger: CCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAG...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCTCCGCGTCTGGGACGTaGGCCTTGGGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVSASGT*ALGSRM
Trigger: CATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGA...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGGGTCGGACTCCGACATaGAGGGCATCAGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATGRTPT*RASAAR
Trigger: ACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACC...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GGAGCTGTGCGTGCTCGCGGATCTCGGGCTGGCTGTAGACCAGCGCCGCGGGCCCTTGTGCTATTTGTATaGCGTCGAACAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: GAVRARGSRAGCRPAPRALVLFV*RRTDWI
Trigger: GATCCAGTCTGTTCGACGCCATACAAATAGCACAAG...GGCCCGCGGCGCTGGTCTACAGCCAGCCCGAGATCCGCGAGCACGCACAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGCACCAGGCCCCTGTTaGGCTGCTTCATCACAGTCT +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRAPGPC*AASSQS
Trigger: AGACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGC...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCGGCTCGGTAGCGGCCTaGCGTGGTGAGGTCGGACTC +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGGSVAA*RGEVGL
Trigger: GAGTCCGACCTCACCACGTCAGGCCGCTACCGAGCC...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCGGCGGTCACAGGACTTaGATTCCCTGGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPGGHRT*IPWGQC
Trigger: GCACTGTCCCCAGGGAATTCAAGTCCTGTGACCGCC...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAGTTTGCACCGAGTGGTaGACGCGCCGCGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQREVCTEW*TRRVMR
Trigger: CCTCATCACGCGGCGCGTGCACCACTCGGTGCAAAC...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp ACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTCCTCCTGGAACGTTTaGACCGAGTGGTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: TANRTDRGRARPLKPSPPSSWNV*TEWCTR
Trigger: GCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGA...AGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCATGCTGTTCCGTTTGTaGAGCTGCGCGTGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVMLFRL*SCAWRA
Trigger: CGCGCGCCACGCGCAGCTGCACAAACGGAACAGCAT...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTGGGCTCCAGGATGTaGAGGGGCCCGGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTLGSRM*RGPASR
Trigger: CCTGCTCGCCGGGCCCCTGCACATCCTGGAGCCCAA...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGACAGACGGTCCTCTCTTaGCCAGTAAGGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGQTVLS*PVRRCF
Trigger: GAAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTG...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCTTTGGGGATCACTTGTaGTATTTGTATGGCGTCGAA +
Preference number: 4 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRFGDHL*YLYGVE
Trigger: TTCGACGCCATACAAATAGCACAAGTGATCCCCAAA...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGTCTCATAGTCTGGGGTaGGGCGGTAGGACGGGGGTA +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATSHSLG*GGRTGV
Trigger: TACCCCCGTCCTACCGCCCCACCCCAGACTATGAGA...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTCTCATAGTCTGGGGTaGGGCGGTAGGACGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHSHSLG*GGRTGV
Trigger: TACCCCCGTCCTACCGCCCCACCCCAGACTATGAGA...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACAACGTTTGCACCGAGTaGTGCACGCGCCGCGTGATG +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHNVCTE*CTRRVM
Trigger: CATCACGCGGCGCGTGCACCACTCGGTGCAAACGTT...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTTTGTGCAGCTGCGCGTaGCGCGCGGCGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLLCSCA*RAAVRG
Trigger: GCCCCTCACCGCCGCGCGCCACGCGCAGCTGCACAA...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCTCCGCGTCTGGGACGTaGGCCTTGGGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PRLETPLQPVLRTFPSACSASGT*ALGSRM
Trigger: CATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGA...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCCTCTTCTCCGCGTCTaGGACGTGGGCCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRLETPLQPVLRTFPSACPLLRV*DVGLGL
Trigger: GAGCCCAAGGCCCACGTCCCAGACGCGGAGAAGAGG...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGACAGTGCCACGCTGCGTaGATCAAGTGTCAACGGGAA +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGQCHAA*IKCQRE
Trigger: TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTG...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCTGGGGACAGTGCTGTaGGGTCCCCTGCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: RLETPLQPVLRTFPSACRLGTVL*GPLLAI
Trigger: GATGGCGAGCAGGGGACCCCACAGCACTGTCCCCAG...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCTACGGATCCGACCGTTaGGGTCAATCTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCYGSDR*GQSGLY
Trigger: ATAGAGCCCAGATTGACCTCAACGGTCGGATCCGTA...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCGCACCAGGCCCCTGTTaGGCTGCTTCATCACAGTCT +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPAPGPC*AASSQS
Trigger: AGACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGC...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCACGAGCTGCCGATGTTaGGGTTTCGCAGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVTSCRC*GFAASG
Trigger: GCCACTCGCTGCGAAACCTCAACATCGGCAGCTCGT...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GGCATAGCAGCCAGAGTCTGTGCGGAACCGGGTCGTGATCTTAAACCTTCCATAATAGGGTGCGCTCCTTaGGCCGCAGGCCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GIAARVCAEPGRDLKPSIIGCAP*AAGPPG
Trigger: GCCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTAT...TATGGAAGGTTTAAGATCACGACCCGGTTCCGCACAGACTCTGGCTGCTATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAGCTGTGTCCTCTCGGTaGAAACGCTGGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSAVSSR*KRWAGS
Trigger: GCTCCCAGCCCAGCGTTTTCACCGAGAGGACACAGC...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGCGGCCTGACGTGGTaGGGTCGGACTCCGACATGG +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMSGLTW*GRTPTW
Trigger: CCATGTCGGAGTCCGACCTCACCACGTCAGGCCGCT...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCGCAGGGCAAGGCCCTTaGAACCAAGTCCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRAGQGP*NQVLLE
Trigger: CTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGC...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATGTGCACTGTAGACACTaGCATTACGGATCCGACCGT +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDVHCRH*HYGSDR
Trigger: ACGGTCGGATCCGTAATGGCAGTGTCTACAGTGCAC...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCACTCTGCCGTTCCGCATaGACCAGGCCCCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSLCRSA*TRPLLS
Trigger: GCTCAACAGGGGCCTGGTGCATGCGGAACGGCAGAG...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACCTCTGCCGTTCCGCATaGACCAGGCCCCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: FRLRHLRPSATLRGSSVNLCRSA*TRPLLS
Trigger: GCTCAACAGGGGCCTGGTGCATGCGGAACGGCAGAG...GTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGCGCAGCGAGTGGCTCTaGCGTTCCGCATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMRSEWL*RSACTR
Trigger: CCTGGTGCATGCGGAACGGCAGAGCCACTCGCTGCG...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGGTGGCCGGTACACCTaGGTCCGCATGATGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LRTFPSACRHSDCATYVPGGRYT*VRMMLG
Trigger: TCCCAACATCATGCGGACGCAGGTGTACCGGCCACC...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATGCCCAGTAAGGAGGTaGTTCATCTTCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGCPVRR*FIFRPV
Trigger: CACAGGCCTGAAGATGAAGCACCTCCTTACTGGGCA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTCTGTGTATTGGAGGTaGCAGACGGTCCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAASVYWR*QTVLSC
Trigger: GCAAGAGAGGACCGTCTGGCACCTCCAATACACAGA...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCCCACTTACGTCCCAGTaGCACGCTGCGTGGATCAAG +
Preference number: 4 (lower is better)
Translates to: VCKYCKPDRPGQGKALETPLTSQ*HAAWIK
Trigger: CTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG...GGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAATGCCGCCATTCAGACTaGGCCACTTACGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQCRHSD*ATYVPV
Trigger: CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCACGTTTCCTTCAGCGTaGCGCCATTCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRTFPSA*RHSDCA
Trigger: GGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGT...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAAATGTGTGCAAGTACTaGAAACCGGACAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGNVCKY*KPDRPG
Trigger: CCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACCGGGATGTCCAGCACTaGAGTGGACCAACAACGGAG +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHRDVQH*SGPTTE
Trigger: CTCCGTTGTTGGTCCACTGCAGTGCTGGACATCCCG...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553531.1
CDS-3UTR CCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCAACGGAGTCTCCAATaGCCCGAGGAAGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLQRSLQ*PEEGSI
Trigger: AATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTG...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CCCGTCTCTCCAGGGCCGCTGGGCCTCTGCGGTCGTGCGGACGGGGCTGCTGTCACAAAGAGGTTATCTTaGGAAGAAGCATATGGTTCT +
Preference number: 4 (lower is better)
Translates to: PVSPGPLGLCGRADGAAVTKRLS*EEAYGS
Trigger: AGAACCATATGCTTCTTCCCAAGATAACCTCTTTGT...GACAGCAGCCCCGTCCGCACGACCGCAGAGGCCCAGCGGCCCTGGAGAGACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCATCTCATAGTCTGGGGTaGGGCGGTAGGACGGGGGTA +
Preference number: 4 (lower is better)
Translates to: LRTFPSACRHSDCATYVPSHSLG*GGRTGV
Trigger: TACCCCCGTCCTACCGCCCCACCCCAGACTATGAGA...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGGTTTCGCAGCGAGTaGCTCTGCCGTTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQRERFRSE*LCRSAC
Trigger: GCATGCGGAACGGCAGAGCCACTCGCTGCGAAACCT...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGCGGGTAGGGTGGGGGTaGCCGGTACACCTGCGTCCG +
Preference number: 4 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVRVGWG*PVHLRP
Trigger: CGGACGCAGGTGTACCGGCCACCCCCACCCTACCCG...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGTTTGCACCGAGTaGTGCACGCGCCGCGTGATG +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVNVCTE*CTRRVM
Trigger: CATCACGCGGCGCGTGCACCACTCGGTGCAAACGTT...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGTGGATTAGCATGGTaGCGTCCGACAGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAACGLAW*RPTGTS
Trigger: AGAAGTCCCTGTCGGACGCCACCATGCTAATCCACA...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACGGCCAGTCTGTGTATTaGAGGTGCCAGACGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHGQSVY*RCQTVL
Trigger: GAGGACCGTCTGGCACCTCCAATACACAGACTGGCC...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCGGCCAGTCTGTGTATTaGAGGTGCCAGACGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KPDRPGQGKALETKSSLSGQSVY*RCQTVL
Trigger: GAGGACCGTCTGGCACCTCCAATACACAGACTGGCC...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGGGCCAGTCTGTGTATTaGAGGTGCCAGACGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATGQSVY*RCQTVL
Trigger: GAGGACCGTCTGGCACCTCCAATACACAGACTGGCC...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTCCCTTGAGGTCTTCTaGACAGCCATGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAASLEVF*TAMFRP
Trigger: TGGCCTGAACATGGCTGTCCAGAAGACCTCAAGGGA...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATTCCCTTGAGGTCTTCTaGACAGCCATGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDSLEVF*TAMFRP
Trigger: TGGCCTGAACATGGCTGTCCAGAAGACCTCAAGGGA...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCACCCCAGCACTGCAGTaGACCAACAACGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRTPALQ*TNNGGL
Trigger: CAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGGGT...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCCCAACCCAGCGCTGGTaGCGCCAGGAGAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGPTQRW*RQEKAI
Trigger: GATCGCTTTCTCCTGGCGTCACCAGCGCTGGGTTGG...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGACAGCATCAGGAGCTGTaGGCCCTCTGTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGQHQEL*ALCISD
Trigger: ATCAGAAATACAGAGGGCTCACAGCTCCTGATGCTG...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATAGGCAGAGACATCCTTaGAGAAGACCTCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDRQRHP*RRPPPD
Trigger: ATCAGGAGGAGGTCTTCTTCAAGGATGTCTCTGCCT...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACACGAGCTGCCGATGTTaGGGTTTCGCAGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: FRLRHLRPSATLRGSSVNTSCRC*GFAASG
Trigger: GCCACTCGCTGCGAAACCTCAACATCGGCAGCTCGT...GTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAACACCTGCGTCCGCATaGTGTTGGGAGACGGGTAGT +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQRETPASA*CWETGS
Trigger: ACTACCCGTCTCCCAACATCATGCGGACGCAGGTGT...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCACACCTGCGTCCGCATaGTGTTGGGAGACGGGTAGT +
Preference number: 4 (lower is better)
Translates to: KYCKPDRPGQGKALETKSTPASA*CWETGS
Trigger: ACTACCCGTCTCCCAACATCATGCGGACGCAGGTGT...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACCGGGGTTGCTGCTGCTaGTGTAAAGGTGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: FRLRHLRPSATLRGSSVNRGCCC*CKGGGT
Trigger: TGTCCCGCCACCTTTACATCAGCAGCAGCAACCCCG...GTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGATAGGGTGCGCTCCTTaGGCCGCAGGCCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVIGCAP*AAGPPG
Trigger: GCCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTAT...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCTTGTGGGAGCTTAGATaGGCCTGGAGCTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCLWELR*AWSFSG
Trigger: TCCTGAAAAGCTCCAGGCTCATCTAAGCTCCCACAA...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGCAGGGCAAGGCCCTTaGAACCAAGTCCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LRTFPSACRHSDCATYVPAGQGP*NQVLLE
Trigger: CTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGC...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGCGAGGAAGGGAGCATTaGCGCCAGCGCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVRGREH*RQRCSR
Trigger: GCGGGAGCAGCGCTGGCGTCAATGCTCCCTTCCTCG...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556564.6
CDS-3UTR GCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCCCGTGTAGCGCCGGGTaGGTTTCAGTTTCAACCCAA +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRPCSAG*VSVSTQ
Trigger: TTGGGTTGAAACTGAAACGCACCCGGCGCTACACGG...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAGGAGTTGGTGCTGTGTaGACTGTAGACACTGCCATT +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGGVGAV*TVDTAI
Trigger: AATGGCAGTGTCTACAGTGCACACAGCACCAACTCC...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCAGCGCCGCGGGCCTaGTGTAGGCGTACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQPAPRA*CRRTSC
Trigger: GCAGCTCGTACGCCTACAGCAGGCCCGCGGCGCTGG...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp ACATCGGCGAGGGCTGCAAGTAGGGCTGAGGATTATTTAAGGAGTTGGTGCTGTGAGGGGAGCTGTGCGTaGTCGCGGATCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSARAASRAEDYLRSWCCEGSCA*SRISGW
Trigger: CCAGCCCGAGATCCGCGAGCACGCACAGCTCCCCTC...ACAGCACCAACTCCTTAAATAATCCTCAGCCCTACTTGCAGCCCTCGCCGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp ACATCGGCGAGGGCTGCAAGTAGGGCTGAGGATTATTTAAGGAGTTGGTGCTGTTGGCGAGGGGAGCTGTaGGTGCTCGCGGATCTCGGG +
Preference number: 4 (lower is better)
Translates to: TSARAASRAEDYLRSWCCWRGEL*VLADLG
Trigger: CCCGAGATCCGCGAGCACGCACAGCTCCCCTCGCCA...ACAGCACCAACTCCTTAAATAATCCTCAGCCCTACTTGCAGCCCTCGCCGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACTCCTGCGCCTGCAGCTaGGCATTGGTCAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADSCACS*ALVSSG
Trigger: GCCGGAGCTGACCAATGCGCAGCTGCAGGCGCAGGA...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TTCTTCCCAGAGAGAAGGTCCGACACCGGCCTTTTCTTCAGAGAGTCCCTCCGGTCCTCCTGGAACGTTTaGACCGAGTGGTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: FFPERRSDTGLFFRESLRSSWNV*TEWCTR
Trigger: GCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGA...CCGGAGGGACTCTCTGAAGAAAAGGCCGGTGTCGGACCTTCTCTCTGGGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGATGCTGTTCCGTTTGTaGAGCTGCGCGTGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMMLFRL*SCAWRA
Trigger: CGCGCGCCACGCGCAGCTGCACAAACGGAACAGCAT...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTTCGTGCGGACGGGGCTaGTGTCCATCATCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ASTANRTDRGRARPLKPSSCGRG*CPSSSS
Trigger: AGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGA...ACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCGTGCGGACGGGGCTaGTGTCCATCATCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KYCKPDRPGQGKALETKSSCGRG*CPSSSS
Trigger: AGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGA...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCCAGACGGTCCTCTCTTaGCCAGTAAGGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KPDRPGQGKALETKSSLSQTVLS*PVRRCF
Trigger: GAAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTG...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCTGCCGCCATTCAGACTaGGCCACTTACGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVCRHSD*ATYVPV
Trigger: CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCCCCCTCTTCAGCCTGTaGTTCGCACGTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRPLFSL*FARFLQ
Trigger: CTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGG...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCCCCTCTTCAGCCTGTaGTTCGCACGTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATPLFSL*FARFLQ
Trigger: CTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGG...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATATCCCACTCATCCATaGCTACTCAGCGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGYPTHP*LLSGHC
Trigger: ACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGCCAGGCAACTCTTGCTaGACACCGTGTAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTPGNSC*TPCSAG
Trigger: CCCGGCGCTACACGGTGTCCAGCAAGAGTTGCCTGG...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAATAGTGCAACTGCGGTaGGGGAGGCATCACGTAGGG +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQREIVQLR*GRHHVG
Trigger: CCCTACGTGATGCCTCCCCCACCGCAGTTGCACTAT...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCATAGTGCAACTGCGGTaGGGGAGGCATCACGTAGGG +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVIVQLR*GRHHVG
Trigger: CCCTACGTGATGCCTCCCCCACCGCAGTTGCACTAT...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCCCGTTGAGGTCAATCTaGGCTCTATCCAAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCPLRSI*ALSKLV
Trigger: GACAAGCTTGGATAGAGCCCAGATTGACCTCAACGG...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCCGTTGAGGTCAATCTaGGCTCTATCCAAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDPLRSI*ALSKLV
Trigger: GACAAGCTTGGATAGAGCCCAGATTGACCTCAACGG...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAGGCAGGCTGTCCTCCTaGAACGTTTGCACCGAGTGG +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSGRLSS*NVCTEW
Trigger: CCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCC...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CCCTCCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACCAGGCCCTCCAGGCCGTaGCTGAGCCCGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: PSSSAVTIAIIAIPCSHTRPSRP*LSPATS
Trigger: CGAGGTGGCCGGGCTCAGCCACGGCCTGGAGGGCCT...GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCTCCTCCTCGCTGCTGTaGATTAGCATGGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVSSSLL*ISMVAS
Trigger: GGACGCCACCATGCTAATCCACAGCAGCGAGGAGGA...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTCTTCAGGCCTGTGGTaGCATAGCAGCCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHSSGLW*HSSQSL
Trigger: CAGACTCTGGCTGCTATGCCACCACAGGCCTGAAGA...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTTCCCTTGAGGTCTTCTaGACAGCCATGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRSLEVF*TAMFRP
Trigger: TGGCCTGAACATGGCTGTCCAGAAGACCTCAAGGGA...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGTCCCTTGAGGTCTTCTaGACAGCCATGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLSLEVF*TAMFRP
Trigger: TGGCCTGAACATGGCTGTCCAGAAGACCTCAAGGGA...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp CGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCAACAACGGAGGGTTaGGGCTTTGGGGATCACTTG +
Preference number: 4 (lower is better)
Translates to: RTFPSACRHSDCATYVPVPTTEG*GFGDHL
Trigger: CAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGG...CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACCCAACAACGGAGGGTTaGGGCTTTGGGGATCACTTG +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHPTTEG*GFGDHL
Trigger: CAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGG...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCACCCCAGCACTGCAGTaGACCAACAACGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVTPALQ*TNNGGL
Trigger: CAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGGGT...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCCAGTGCCACGCTGCGTaGATCAAGTGTCAACGGGAA +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPQCHAA*IKCQRE
Trigger: TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTG...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCCTGCAGCTGAGAAACTaGAGGCACATAAAACACCAC +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCLQLRN*RHIKHH
Trigger: GTGGTGTTTTATGTGCCTTCAGTTTCTCAGCTGCAG...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCAGCATCAGGAGCTGTaGGCCCTCTGTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLQHQEL*ALCISD
Trigger: ATCAGAAATACAGAGGGCTCACAGCTCCTGATGCTG...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTTTGTGGGAGCTTAGATaGGCCTGGAGCTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRLWELR*AWSFSG
Trigger: TCCTGAAAAGCTCCAGGCTCATCTAAGCTCCCACAA...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCGCAGGGCAAGGCCCTTaGAACCAAGTCCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PRLETPLQPVLRTFPSACAGQGP*NQVLLE
Trigger: CTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGC...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACACTCAGCGGTCACTGTaGCAAGGCCATCTTAATCGG +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHTQRSL*QGHLNR
Trigger: CCGATTAAGATGGCCTTGTCACAGTGACCGCTGAGT...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCCCGTGTAGCGCCGGGTaGGTTTCAGTTTCAACCCAA +
Preference number: 4 (lower is better)
Translates to: SKMCASTANRTDRGRARPPCSAG*VSVSTQ
Trigger: TTGGGTTGAAACTGAAACGCACCCGGCGCTACACGG...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCGTGCACTGTAGACACTaGCATTACGGATCCGACCGT +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPVHCRH*HYGSDR
Trigger: ACGGTCGGATCCGTAATGGCAGTGTCTACAGTGCAC...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGGTGCACTGTAGACACTaGCATTACGGATCCGACCGT +
Preference number: 4 (lower is better)
Translates to: RTFPSACRHSDCATYVPVVHCRH*HYGSDR
Trigger: ACGGTCGGATCCGTAATGGCAGTGTCTACAGTGCAC...CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCACCTCCTGCAGCGAGTaGGCCACGGGCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILITSCSE*ATGRLS
Trigger: GGACAGCCTGCCCGTGGCGCACTCGCTGCAGGAGGT...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGGCCCGGCCACCTCGATaGTGTTCCGTTTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMARPPR*CSVCAA
Trigger: AGCTGCACAAACGGAACAGCATCGAGGTGGCCGGGC...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAACAGACGGTCCTCTCTTaGCCAGTAAGGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQREQTVLS*PVRRCF
Trigger: GAAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTG...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCTCTGTGTATTGGAGGTaGCAGACGGTCCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPSVYWR*QTVLSC
Trigger: GCAAGAGAGGACCGTCTGGCACCTCCAATACACAGA...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATACTGGCAGAGAGTCTaGACCAGCATCATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGYWQRV*TSIILC
Trigger: ACAGAGAATGATGCTGGTGCAGACTCTCTGCCAGTA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp AACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGAGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACG +
Preference number: 4 (lower is better)
Translates to: NPSSACASHVSFSVPPFRVPVPR*VDQVST
Trigger: CGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC...TCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACG +
Preference number: 4 (lower is better)
Translates to: RLETPLQPVLRTFPSACRVPVPR*VDQVST
Trigger: CGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAAATGTGTGCAAGTACTaGAAACCGGACAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQNVCKY*KPDRPG
Trigger: CCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCCTGTCTATTGGGATGTaGCTAAATGGGATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCLSIGM*LNGMGE
Trigger: CTCACCCATCCCATTTAGGCACATCCCAATAGACAG...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAACAACGGAGTCTCCAATaGCCCGAGGAAGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQREQRSLQ*PEEGSI
Trigger: AATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTG...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTAGACCTCCTCCTGATTaGGTTCACTGTGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRRPPPD*VHCDSL
Trigger: CAGACTGTCACAGTGAACCCAATCAGGAGGAGGTCT...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp AATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAATAGTGCAACTGCGGTaGGGGAGGCATCACGTAGGG +
Preference number: 4 (lower is better)
Translates to: NVCKYCKPDRPGQGKALEIVQLR*GRHHVG
Trigger: CCCTACGTGATGCCTCCCCCACCGCAGTTGCACTAT...TTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCCCAACAACGGAGGGTTaGGGCTTTGGGGATCACTTG +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVPTTEG*GFGDHL
Trigger: CAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGG...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATTACACAAATGTGTACTaGCAGAGAGTCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDYTNVY*QRVCTS
Trigger: GCTGGTGCAGACTCTCTGCCAGTACACATTTGTGTA...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGAACGCTTCACATGACTaGCCCCGTAAGAAATTGTGG +
Preference number: 4 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAANASHD*PRKKLW
Trigger: CCACAATTTCTTACGGGGCCAGTCATGTGAAGCGTT...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp GCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTTACGGATCCGACCGTTaGGGTCAATCTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: ASTANRTDRGRARPLKPSYGSDR*GQSGLY
Trigger: ATAGAGCCCAGATTGACCTCAACGGTCGGATCCGTA...ACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTGTGGGAGCTTAGATaGGCCTGGAGCTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHLWELR*AWSFSG
Trigger: TCCTGAAAAGCTCCAGGCTCATCTAAGCTCCCACAA...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCACTCAGCGGTCACTGTaGCAAGGCCATCTTAATCGG +
Preference number: 4 (lower is better)
Translates to: SKMCASTANRTDRGRARPTQRSL*QGHLNR
Trigger: CCGATTAAGATGGCCTTGTCACAGTGACCGCTGAGT...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACGTCCTGTCTCGTGGCTaGCAACATACATGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHVLSRG*QHTCSA
Trigger: AGCACTACATGTATGTTGTCAGCCACGAGACAGGAC...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCCAACCAGGCAACTCTTaGTGGACACCGTGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGQPGNS*WTPCSA
Trigger: GGCGCTACACGGTGTCCAGCAAGAGTTGCCTGGTTG...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACTCCTCCTGGAACGTTTaGACCGAGTGGTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADSSWNV*TEWCTR
Trigger: GCGCGTGCACCACTCGGTGCAAACGTTCCAGGAGGA...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCTCGTGCGGACGGGGCTaGTGTCCATCATCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGSCGRG*CPSSSS
Trigger: AGAAGAGGATGATGGACAGCAGCCCCGTCCGCACGA...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp AATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAACAGACGGTCCTCTCTTaGCCAGTAAGGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: NVCKYCKPDRPGQGKALEQTVLS*PVRRCF
Trigger: GAAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTG...TTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGTACTGGCAGAGAGTCTaGACCAGCATCATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLYWQRV*TSIILC
Trigger: ACAGAGAATGATGCTGGTGCAGACTCTCTGCCAGTA...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGTGCCGCCATTCAGACTaGGCCACTTACGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMCRHSD*ATYVPV
Trigger: CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGACGTTTCCTTCAGCGTaGCGCCATTCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMTFPSA*RHSDCA
Trigger: GGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGT...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCAATGTGTGCAAGTACTaGAAACCGGACAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: KYCKPDRPGQGKALETKSNVCKY*KPDRPG
Trigger: CCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCTGCTGTGGGGTCCCCTaGTCGCCATCCCAGCACCTC +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILICCGVP*SPSQHL
Trigger: GAGGTGCTGGGATGGCGAGCAGGGGACCCCACAGCA...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGTATCCCACTCATCCATaGCTACTCAGCGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATYPTHP*LLSGHC
Trigger: ACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGGCGATCCTCTCCGGATaGGACGAACACTGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVAILSG*DEHCPA
Trigger: GGCCGGACAGTGTTCGTCCCATCCGGAGAGGATCGC...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAAGACACGCTCCAATGGATATGTCACTTCCTTGGCTATCCTTAGCAGGGTAGCAGTGTGCGGCCGCTaGCGAGGGGAGCTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: FKTRSNGYVTSLAILSRVAVCGR*RGELCV
Trigger: CACGCACAGCTCCCCTCGCCAGCGGCCGCACACTGC...TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACCCTGGAACCAAGTCGTaGCCAGTACCTAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHPGTKS*PVPKAL
Trigger: AAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGG...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACTCTTCAGGCCTGTGGTaGCATAGCAGCCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FRLRHLRPSATLRGSSVNSSGLW*HSSQSL
Trigger: CAGACTCTGGCTGCTATGCCACCACAGGCCTGAAGA...GTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCATCTTCAGGCCTGTaGTGGCATAGCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KYCKPDRPGQGKALETKSSSSGL*WHSSQS
Trigger: ACTCTGGCTGCTATGCCACCACAGGCCTGAAGATGA...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAGAGCTTTTCAGGAACTaGATGAGGACTCTGTACACA +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGELFRN*MRTLYT
Trigger: TGTGTACAGAGTCCTCATCCAGTTCCTGAAAAGCTC...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCACAGTGCCACGCTGCGTaGATCAAGTGTCAACGGGAA +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSQCHAA*IKCQRE
Trigger: TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTG...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCCCCTGTAACTCAGCCTaGCTCTGTCTATTGGGATGT +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRPCNSA*LCLLGC
Trigger: ACATCCCAATAGACAGAGCCAGGCTGAGTTACAGGG...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCCTGCAGCTGAGAAACTaGAGGCACATAAAACACCAC +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPLQLRN*RHIKHH
Trigger: GTGGTGTTTTATGTGCCTTCAGTTTCTCAGCTGCAG...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCCTGGGATTCATACTaGTCAAAGTCACCAAAATCC +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGSWDSY*SKSPKS
Trigger: GGATTTTGGTGACTTTGATCAGTATGAATCCCAGGA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTTCACTGTGACAGTCTaGGTTTGCAGGTTACACTGG +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRFTVTV*VCRLHW
Trigger: CCAGTGTAACCTGCAAACTCAGACTGTCACAGTGAA...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAATTCACTGTGACAGTCTaGGTTTGCAGGTTACACTGG +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQFTVTV*VCRLHW
Trigger: CCAGTGTAACCTGCAAACTCAGACTGTCACAGTGAA...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCAGGCAGAGACATCCTTaGAGAAGACCTCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVRQRHP*RRPPPD
Trigger: ATCAGGAGGAGGTCTTCTTCAAGGATGTCTCTGCCT...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCACCAGGCAGGCGATCATaGTCTCCGACAAAATCACCA +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSPGRRS*SPTKSP
Trigger: TGGTGATTTTGTCGGAGATCATGATCGCCTGCCTGG...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATTTTCAGGAACTGGATaGGGACTCTGTACACAAATG +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGFSGTG*GLCTQM
Trigger: CATTTGTGTACAGAGTCCTCATCCAGTTCCTGAAAA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGGTCAACGGGAAAGTATaGGTTAGGCAAGCGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLVNGKV*VRQALF
Trigger: AAAAAGCGCTTGCCTAACTCATACTTTCCCGTTGAC...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATATTCTCTCTACCTCCTaGATGTACAGCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDILSTS*MYSISA
Trigger: TGCTGAAATGCTGTACATGCAGGAGGTAGAGAGAAT...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCTCTGCCGTTCCGCATaGACCAGGCCCCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQLCRSA*TRPLLS
Trigger: GCTCAACAGGGGCCTGGTGCATGCGGAACGGCAGAG...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCTGCCCAGTAAGGAGGTaGTTCATCTTCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RLETPLQPVLRTFPSACRCPVRR*FIFRPV
Trigger: CACAGGCCTGAAGATGAAGCACCTCCTTACTGGGCA...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCATCTGTGTATTGGAGGTaGCAGACGGTCCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSSVYWR*QTVLSC
Trigger: GCAAGAGAGGACCGTCTGGCACCTCCAATACACAGA...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGCATCATTCTCTGTTaGCTCAGCATGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPSIILC*LSMSST
Trigger: AGTGCTGGACATGCTGAGGCAACAGAGAATGATGCT...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGCCCCTCTTCAGCCTGTaGTTCGCACGTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMPLFSL*FARFLQ
Trigger: CTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGG...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGCCACAGCAATCTCTGTaGACAAATTTGGACTGTACT +
Preference number: 4 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAAPQQSL*TNLDCT
Trigger: AGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGG...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAATCGTTATTAAGCAGTTaGATCCGGGCAACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQSLLSS*IRATRQ
Trigger: TTGCCTGGTTGCCCGGATCCAACTGCTTAATAACGA...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTCGTTATTAAGCAGTTaGATCCGGGCAACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHSLLSS*IRATRQ
Trigger: TTGCCTGGTTGCCCGGATCCAACTGCTTAATAACGA...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTCGTTATTAAGCAGTTaGATCCGGGCAACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRSLLSS*IRATRQ
Trigger: TTGCCTGGTTGCCCGGATCCAACTGCTTAATAACGA...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACCAAGACACGCTCCAATaGATATGTCACTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHQDTLQ*ICHFLG
Trigger: GCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTG...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCGACAGGGACTTCTTATaGCCGTACCTCAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGDRDFL*PYLKPS
Trigger: GGAGGGCTTGAGGTACGGCCATAAGAAGTCCCTGTC...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCCCTGGAACCAAGTCGTaGCCAGTACCTAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SKMCASTANRTDRGRARPPGTKS*PVPKAL
Trigger: AAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGG...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAATGTAGTCCCAGCTCTTaGCAGGCTAAGGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQRECSPSS*QAKAKG
Trigger: TCCTTTTGCCTTAGCCTGCCAAGAGCTGGGACTACA...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 72 bp CCAGTCTGTGTATTGGAGGTGCCAGACGGTCCTCTCTaGCCCAGTAAGGAGGTGCTTCATCTTCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PVCVLEVPDGPL*PSKEVLHLQAC
Trigger: ACAGGCCTGAAGATGAAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTGGCACCTCCAATACACAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp TTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACTCTCCACGGACAGGGTaGACTCCACAAACTCGTTAT +
Preference number: 4 (lower is better)
Translates to: FRLRHLRPSATLRGSSVNSPRTG*TPQTRY
Trigger: ATAACGAGTTTGTGGAGTTCACCCTGTCCGTGGAGA...GTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCTGCAGCTGAGAAACTaGAGGCACATAAAACACCAC +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVLQLRN*RHIKHH
Trigger: GTGGTGTTTTATGTGCCTTCAGTTTCTCAGCTGCAG...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCTTCACTGTGACAGTCTaGGTTTGCAGGTTACACTGG +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVFTVTV*VCRLHW
Trigger: CCAGTGTAACCTGCAAACTCAGACTGTCACAGTGAA...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTACGGATCCGACCGTTaGGGTCAATCTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTYGSDR*GQSGLY
Trigger: ATAGAGCCCAGATTGACCTCAACGGTCGGATCCGTA...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp CGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGGTCAACGGGAAAGTATaGGTTAGGCAAGCGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RTFPSACRHSDCATYVPVVNGKV*VRQALF
Trigger: AAAAAGCGCTTGCCTAACTCATACTTTCCCGTTGAC...CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCGTCCTGTCTCGTGGCTaGCAACATACATGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PRLETPLQPVLRTFPSACVLSRG*QHTCSA
Trigger: AGCACTACATGTATGTTGTCAGCCACGAGACAGGAC...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGATGTTGGCAATGTCATaGCACCTAAATACCACAGGA +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLMLAMS*HLNTTG
Trigger: TCCTGTGGTATTTAGGTGGCATGACATTGCCAACAT...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAGGAGTTGGTGCTGTGTaGACTGTAGACACTGCCATT +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSGVGAV*TVDTAI
Trigger: AATGGCAGTGTCTACAGTGCACACAGCACCAACTCC...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTTATTTAAGGAGTTGGTaGTGTGTGCACTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRYLRSW*CVHCRH
Trigger: GTGTCTACAGTGCACACAGCACCAACTCCTTAAATA...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGGCCCGGCCACCTCGATaGTGTTCCGTTTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQARPPR*CSVCAA
Trigger: AGCTGCACAAACGGAACAGCATCGAGGTGGCCGGGC...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCTTTCATCATTCGTTaGTCTGGTAGCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: RTFPSACRHSDCATYVPVPFIIR*SGSHFL
Trigger: AAGGAAGTGGCTACCAGAGCAACGAATGATGAAAGG...CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp ACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTCCTTTCATCATTCGTTaGTCTGGTAGCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: TANRTDRGRARPLKPSPPPFIIR*SGSHFL
Trigger: AAGGAAGTGGCTACCAGAGCAACGAATGATGAAAGG...AGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATTTCTGCTGTCACCATTaGTATAATTGCAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDFCCHH*YNCNSL
Trigger: CAGGGAATTGCAATTATAGCAATGGTGACAGCAGAA...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCTCCACCCTCCTCTTCTaGTGTCACCATTGCTATAAT +
Preference number: 4 (lower is better)
Translates to: KPDRPGQGKALETKSSLSSTLLF*CHHCYN
Trigger: ATTATAGCAATGGTGACAGCAGAAGAGGAGGGTGGA...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCTACTGGCAGAGAGTCTaGACCAGCATCATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVYWQRV*TSIILC
Trigger: ACAGAGAATGATGCTGGTGCAGACTCTCTGCCAGTA...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTACTGGCAGAGAGTCTaGACCAGCATCATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SKMCASTANRTDRGRARPYWQRV*TSIILC
Trigger: ACAGAGAATGATGCTGGTGCAGACTCTCTGCCAGTA...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTACGTTTCCTTCAGCGTaGCGCCATTCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLTFPSA*RHSDCA
Trigger: GGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGT...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCAGAGTTAGGCTGGTaGACACACTATTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHAELGW*THYLGS
Trigger: ACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGC...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCCAAGACACGCTCCAATaGATATGTCACTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVQDTLQ*ICHFLG
Trigger: GCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTG...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAGATTATTTAAGGAGTTaGTGCTGTGTGCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGDYLRS*CCVHCR
Trigger: TCTACAGTGCACACAGCACCAACTCCTTAAATAATC...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACGACAGGGACTTCTTATaGCCGTACCTCAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADDRDFL*PYLKPS
Trigger: GGAGGGCTTGAGGTACGGCCATAAGAAGTCCCTGTC...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTGTGGATTAGCATGGTaGCGTCCGACAGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTCGLAW*RPTGTS
Trigger: AGAAGTCCCTGTCGGACGCCACCATGCTAATCCACA...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp ACATCGGCGAGGGCTGCAAGTAGGGCTGAGGATTATTTAAGGAGTTGGTGCTGTTCCTCCTCGCTGCTGTaGATTAGCATGGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TSARAASRAEDYLRSWCCSSSLL*ISMVAS
Trigger: GGACGCCACCATGCTAATCCACAGCAGCGAGGAGGA...ACAGCACCAACTCCTTAAATAATCCTCAGCCCTACTTGCAGCCCTCGCCGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCTCATCTTCAGGCCTGTaGTGGCATAGCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGSSSGL*WHSSQS
Trigger: ACTCTGGCTGCTATGCCACCACAGGCCTGAAGATGA...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACCTTGTGCTATTTGTATaGCGTCGAACAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHLVLFV*RRTDWI
Trigger: GATCCAGTCTGTTCGACGCCATACAAATAGCACAAG...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACCCAACAACGGAGGGTTaGGGCTTTGGGGATCACTTG +
Preference number: 4 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADPTTEG*GFGDHL
Trigger: CAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGG...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTACACAAATGTGTACTaGCAGAGAGTCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: KYCKPDRPGQGKALETKSYTNVY*QRVCTS
Trigger: GCTGGTGCAGACTCTCTGCCAGTACACATTTGTGTA...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAAACGGAGTAAGTCACTaGCGGTCACAGGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: LRTFPSACRHSDCATYVPNGVSH*RSQDLN
Trigger: ATTCAAGTCCTGTGACCGCCAGTGACTTACTCCGTT...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGCTAAGCCTGCTAGCTaGATTGCTTGTTCTAAGGTA +
Preference number: 4 (lower is better)
Translates to: LRTFPSACRHSDCATYVPAKPAS*IACSKV
Trigger: TACCTTAGAACAAGCAATTCAGCTAGCAGGCTTAGC...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTAACAAGGCAAATTTCTaGAGAAAGTCCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRNKANF*RKSWDS
Trigger: TGAATCCCAGGACTTTCTTCAGAAATTTGCCTTGTT...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGAACAAGGCAAATTTCTaGAGAAAGTCCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLNKANF*RKSWDS
Trigger: TGAATCCCAGGACTTTCTTCAGAAATTTGCCTTGTT...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCCAGCATCAGGAGCTGTaGGCCCTCTGTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGQHQEL*ALCISD
Trigger: ATCAGAAATACAGAGGGCTCACAGCTCCTGATGCTG...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCAGGCAGAGACATCCTTaGAGAAGACCTCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGRQRHP*RRPPPD
Trigger: ATCAGGAGGAGGTCTTCTTCAAGGATGTCTCTGCCT...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp CCCTCCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACCCGGGGTTGCTGCTGCTaGTGTAAAGGTGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: PSSSAVTIAIIAIPCSHTRGCCC*CKGGGT
Trigger: TGTCCCGCCACCTTTACATCAGCAGCAGCAACCCCG...GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp CCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCTGCTGTGGATTAGCATGGTGGATGATAAAAATCCCTTaGGGTCTTCTGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: PPRSPRPPPPRCCGLAWWMIKIP*GLLDSH
Trigger: ATGGCTGTCCAGAAGACCTCAAGGGATTTTTATCAT...CCACCATGCTAATCCACAGCAGCGAGGAGGAGGAGGACGAGGACTTCGAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGATGATAAAAATCCCTTaGGGTCTTCTGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATMIKIP*GLLDSH
Trigger: ATGGCTGTCCAGAAGACCTCAAGGGATTTTTATCAT...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCTTTTCAGGAACTGGATaGGGACTCTGTACACAAATG +
Preference number: 4 (lower is better)
Translates to: KPDRPGQGKALETKSSLSFSGTG*GLCTQM
Trigger: CATTTGTGTACAGAGTCCTCATCCAGTTCCTGAAAA...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGTTTTCAGGAACTGGATaGGGACTCTGTACACAAATG +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATFSGTG*GLCTQM
Trigger: CATTTGTGTACAGAGTCCTCATCCAGTTCCTGAAAA...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp GTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCTTTTCAGGAACTGGATaGGGACTCTGTACACAAATG +
Preference number: 4 (lower is better)
Translates to: VCKYCKPDRPGQGKALETFSGTG*GLCTQM
Trigger: CATTTGTGTACAGAGTCCTCATCCAGTTCCTGAAAA...GGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAAATTTTGTTCCTACATaGGAAGTGTGCGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGNFVPT*EVCVLS
Trigger: TGAAAGTACGCACACTTCTCATGTAGGAACAAAATT...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCGACGGTAGGTTCCAATaGATATTTATCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRDGRFQ*IFIQLL
Trigger: AAGCAGCTGGATAAATATGCATTGGAACCTACCGTC...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACATTCTCTCTACCTCCTaGATGTACAGCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHILSTS*MYSISA
Trigger: TGCTGAAATGCTGTACATGCAGGAGGTAGAGAGAAT...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCATGTTGGCAATGTCATaGCACCTAAATACCACAGGA +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPMLAMS*HLNTTG
Trigger: TCCTGTGGTATTTAGGTGGCATGACATTGCCAACAT...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCTATTTAAGGAGTTGGTaGTGTGTGCACTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPYLRSW*CVHCRH
Trigger: GTGTCTACAGTGCACACAGCACCAACTCCTTAAATA...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp CACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCCAGCTGCTTCTTTTGGGCTCCAGGATGTaGAGGGGCCCGGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HHSKIDGRFQCIFIQLLLLGSRM*RGPASR
Trigger: CCTGCTCGCCGGGCCCCTGCACATCCTGGAGCCCAA...AAGAAGCAGCTGGATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACGAATCGATTTCTTTCTaGATTTTCAGGGAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHESISF*IFRESC
Trigger: GCACGACTCCCTGAAAATGCAGAAAGAAATCGATTC...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACTGCCCAGTAAGGAGGTaGTTCATCTTCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADCPVRR*FIFRPV
Trigger: CACAGGCCTGAAGATGAAGCACCTCCTTACTGGGCA...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAAGCATCATTCTCTGTTaGCTCAGCATGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSSIILC*LSMSST
Trigger: AGTGCTGGACATGCTGAGGCAACAGAGAATGATGCT...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAAATCTCCAAAATGTGTaGAAGTACTGCAAACCGGAC +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQNLQNV*KYCKPD
Trigger: GTCCGGTTTGCAGTACTTGCACACATTTTGGAGATT...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCAAGACGAAGGCATCCTaGATTTACCATCACACTCCA +
Preference number: 4 (lower is better)
Translates to: SKMCASTANRTDRGRARPKTKAS*IYHHTP
Trigger: TGGAGTGTGATGGTAAATGCAGGATGCCTTCGTCTT...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTAAGACGAAGGCATCCTaGATTTACCATCACACTCCA +
Preference number: 4 (lower is better)
Translates to: ASTANRTDRGRARPLKPSKTKAS*IYHHTP
Trigger: TGGAGTGTGATGGTAAATGCAGGATGCCTTCGTCTT...ACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACCCACAGCAATCTCTGTaGACAAATTTGGACTGTACT +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHPQQSL*TNLDCT
Trigger: AGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGG...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTGCAGAGTTAGGCTGGTaGACACACTATTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ASTANRTDRGRARPLKPSAELGW*THYLGS
Trigger: ACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGC...ACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGGATTATTTAAGGAGTTaGTGCTGTGTGCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLDYLRS*CCVHCR
Trigger: TCTACAGTGCACACAGCACCAACTCCTTAAATAATC...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTAGGCCCTCCAGGCCGTaGCTGAGCCCGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFRPSRP*LSPATS
Trigger: CGAGGTGGCCGGGCTCAGCCACGGCCTGGAGGGCCT...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCTCCTCCTCGCTGCTGTaGATTAGCATGGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILISSSLL*ISMVAS
Trigger: GGACGCCACCATGCTAATCCACAGCAGCGAGGAGGA...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCGTTGTTTTCTTTAGTTaGGACCAACTCCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRVVFFS*DQLHSH
Trigger: GTGAGAGTGGAGTTGGTCCCAACTAAAGAAAACAAC...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACGTAATGGTCCCTGTGTaGCAATATAATCCCATTCGA +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHVMVPV*QYNPIR
Trigger: TCGAATGGGATTATATTGCCACACAGGGACCATTAC...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTAATGGTCCCTGTGTaGCAATATAATCCCATTCGA +
Preference number: 4 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQVMVPV*QYNPIR
Trigger: TCGAATGGGATTATATTGCCACACAGGGACCATTAC...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACTGGCGTCGAACAGACTaGATCTCTTCAAGATATGAT +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHWRRTD*ISSRYD
Trigger: ATCATATCTTGAAGAGATCCAGTCTGTTCGACGCCA...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCTGGCGTCGAACAGACTaGATCTCTTCAAGATATGAT +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPWRRTD*ISSRYD
Trigger: ATCATATCTTGAAGAGATCCAGTCTGTTCGACGCCA...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCATACACAAATGTGTACTaGCAGAGAGTCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSYTNVY*QRVCTS
Trigger: GCTGGTGCAGACTCTCTGCCAGTACACATTTGTGTA...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAAACGGAGTAAGTCACTaGCGGTCACAGGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSNGVSH*RSQDLN
Trigger: ATTCAAGTCCTGTGACCGCCAGTGACTTACTCCGTT...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCTCTGTGCACAAATTTaGACTGTACTTTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLLCAQI*TVLFGR
Trigger: TCTCCCAAAAAGTACAGTCCAAATTTGTGCACAGAG...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCTTCCTCTTAGGTGGTTaGTTTCTGGGTAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RLETPLQPVLRTFPSACRFLLGG*FLGKAE
Trigger: CTCTGCCTTACCCAGAAACCAACCACCTAAGAGGAA...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR CAA 72 bp GGACCAACAACGGAGGGTTGGGGCTTTGGGGATCACTaGTGCTATTTGTATGGCGTCGAACAGACTGGATCT +
Preference number: 4 (lower is better)
Translates to: GPTTEGWGFGDH*CYLYGVEQTGS
Trigger: AGATCCAGTCTGTTCGACGCCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCAGCCCTCTGTATTTCTaGTGTAGTAAGGCCACTTTT +
Preference number: 4 (lower is better)
Translates to: SKMCASTANRTDRGRARPSPLYF*CSKATF
Trigger: AAAAGTGGCCTTACTACATCAGAAATACAGAGGGCT...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAGCCCTCTGTATTTCTaGTGTAGTAAGGCCACTTTT +
Preference number: 4 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVSPLYF*CSKATF
Trigger: AAAAGTGGCCTTACTACATCAGAAATACAGAGGGCT...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACAGAGACCTTAATATGTaGTGCGTTGATGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHRDLNM*CVDVTS
Trigger: ACTGGTTACATCAACGCATCACATATTAAGGTCTCT...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGAGAGACCTTAATATGTaGTGCGTTGATGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATRDLNM*CVDVTS
Trigger: ACTGGTTACATCAACGCATCACATATTAAGGTCTCT...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAATGATAAAAATCCCTTaGGGTCTTCTGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQREMIKIP*GLLDSH
Trigger: ATGGCTGTCCAGAAGACCTCAAGGGATTTTTATCAT...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGCCAGGCAGGCGATCATaGTCTCCGACAAAATCACCA +
Preference number: 4 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVPGRRS*SPTKSP
Trigger: TGGTGATTTTGTCGGAGATCATGATCGCCTGCCTGG...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAATGCAAGTACCTCTTaGATACCACAGCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: TAPLTSQCHAAWIKCQRENASTS*IPQQSL
Trigger: CAGAGATTGCTGTGGTATTCAAGAGGTACTTGCATT...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCAATCGGGGCCAGAGATaGCACTCTCCCCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILINRGQR*HSPPVT
Trigger: AGTTACAGGGGGAGAGTGTCATCTCTGGCCCCGATT...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCCTTTCATCATTCGTTaGTCTGGTAGCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: RLETPLQPVLRTFPSACRPFIIR*SGSHFL
Trigger: AAGGAAGTGGCTACCAGAGCAACGAATGATGAAAGG...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCGAATCGATTTCTTTCTaGATTTTCAGGGAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: KYCKPDRPGQGKALETKSESISF*IFRESC
Trigger: GCACGACTCCCTGAAAATGCAGAAAGAAATCGATTC...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCTTCTGCTGTCACCATTaGTATAATTGCAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPFCCHH*YNCNSL
Trigger: CAGGGAATTGCAATTATAGCAATGGTGACAGCAGAA...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCTTTGGGGATCACTTGTaGTATTTGTATGGCGTCGAA +
Preference number: 4 (lower is better)
Translates to: VLRTFPSACRHSDCATYVFGDHL*YLYGVE
Trigger: TTCGACGCCATACAAATAGCACAAGTGATCCCCAAA...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGAGCATCATTCTCTGTTaGCTCAGCATGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTSIILC*LSMSST
Trigger: AGTGCTGGACATGCTGAGGCAACAGAGAATGATGCT...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCAAAAAGGACTTGTTGTaGGACATGTTGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: FPSACRHSDCATYVPVPRKKDLL*DMLAMS
Trigger: TGACATTGCCAACATGTCCCACAACAAGTCCTTTTT...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCCAGTTTGAAATTGAATaGTCTCCTCTTTATTTGCCA +
Preference number: 4 (lower is better)
Translates to: PSACRHSDCATYVPVPRCQFEIE*SPLYLP
Trigger: TGGCAAATAAAGAGGAGACCATTCAATTTCAAACTG...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGACAGTTTGAAATTGAATaGTCTCCTCTTTATTTGCCA +
Preference number: 4 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGQFEIE*SPLYLP
Trigger: TGGCAAATAAAGAGGAGACCATTCAATTTCAAACTG...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAAGACACGCTCCAATGGATATGTCACTTCCTTGGCTATCCTTAGCAGGGTAGGCAGGCTGTCCTCCTaGAACGTTTGCACCGAGTGG +
Preference number: 4 (lower is better)
Translates to: FKTRSNGYVTSLAILSRVGRLSS*NVCTEW
Trigger: CCACTCGGTGCAAACGTTCCAGGAGGACAGCCTGCC...TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTTGTGGATTAGCATGGTaGCGTCCGACAGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLCGLAW*RPTGTS
Trigger: AGAAGTCCCTGTCGGACGCCACCATGCTAATCCACA...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCACTTGTGCTATTTGTATaGCGTCGAACAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSLVLFV*RRTDWI
Trigger: GATCCAGTCTGTTCGACGCCATACAAATAGCACAAG...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGAGCAACTCATATCTGTaGATCATCCTTACACAAAGT +
Preference number: 4 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLSNSYL*IILTQS
Trigger: ACTTTGTGTAAGGATGATCCACAGATATGAGTTGCT...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACAAGGCAGAGTTAGGCTaGTGCACACACTATTTAGGA +
Preference number: 4 (lower is better)
Translates to: FRLRHLRPSATLRGSSVNKAELG*CTHYLG
Trigger: TCCTAAATAGTGTGTGCACCAGCCTAACTCTGCCTT...GTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGTGTCCAGCACTGCAGTaGACCAACAACGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQCPALQ*TNNGGL
Trigger: CAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGACA...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553531.1
CDS-3UTR TCA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCTCCTGGGATTCATACTaGTCAAAGTCACCAAAATCC +
Preference number: 4 (lower is better)
Translates to: PRLETPLQPVLRTFPSACSWDSY*SKSPKS
Trigger: GGATTTTGGTGACTTTGATCAGTATGAATCCCAGGA...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACTCCTGGGATTCATACTaGTCAAAGTCACCAAAATCC +
Preference number: 4 (lower is better)
Translates to: FRLRHLRPSATLRGSSVNSWDSY*SKSPKS
Trigger: GGATTTTGGTGACTTTGATCAGTATGAATCCCAGGA...GTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp TTCAAGACACGCTCCAATGGATATGTCACTTCCTTGGCTATCCTTAGCAGGGTAACACCTGCGTCCGCATaGTGTTGGGAGACGGGTAGT +
Preference number: 4 (lower is better)
Translates to: FKTRSNGYVTSLAILSRVTPASA*CWETGS
Trigger: ACTACCCGTCTCCCAACATCATGCGGACGCAGGTGT...TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp ACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTATCTGCCAAAAATCTTaGCAGGTATTCTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: TANRTDRGRARPLKPSPPICQKS*QVFCNG
Trigger: ACCATTACAGAATACCTGTCAAGATTTTTGGCAGAT...AGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACATCTGCCAAAAATCTTaGCAGGTATTCTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHICQKS*QVFCNG
Trigger: ACCATTACAGAATACCTGTCAAGATTTTTGGCAGAT...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR TCA 90 bp AACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGAATGATAAAAATCCCTTaGGGTCTTCTGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: NPSSACASHVSFSVPPFRMIKIP*GLLDSH
Trigger: ATGGCTGTCCAGAAGACCTCAAGGGATTTTTATCAT...TCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR TCA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCAATGCAAGTACCTCTTaGATACCACAGCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: RLETPLQPVLRTFPSACRNASTS*IPQQSL
Trigger: CAGAGATTGCTGTGGTATTCAAGAGGTACTTGCATT...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAATTTTGTTCCTACATaGGAAGTGTGCGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPNFVPT*EVCVLS
Trigger: TGAAAGTACGCACACTTCTCATGTAGGAACAAAATT...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACCTAAGGAGCTCGTTCTaGATATTTTCACTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SACASHVSFSVPPFRLRHLRSSF*IFSLSS
Trigger: AGAACTAAGTGAAAATATTCAGAACGAGCTCCTTAG...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp GTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCCTAAGGAGCTCGTTCTaGATATTTTCACTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: VCKYCKPDRPGQGKALETLRSSF*IFSLSS
Trigger: AGAACTAAGTGAAAATATTCAGAACGAGCTCCTTAG...GGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCACTAAATACCACAGGATaGCTTCCATTCTTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LRTFPSACRHSDCATYVPLNTTG*LPFLCF
Trigger: GAAACACAAGAATGGAAGGCATCCTGTGGTATTTAG...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp TGCAAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACATGCTGTTCCGTTTGTaGAGCTGCGCGTGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: CKYLLNTTAISVHKFGLYMLFRL*SCAWRA
Trigger: CGCGCGCCACGCGCAGCTGCACAAACGGAACAGCAT...GTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGAGAATCGATTTCTTTCTaGATTTTCAGGGAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: NPSSACASHVSFSVPPFRESISF*IFRESC
Trigger: GCACGACTCCCTGAAAATGCAGAAAGAAATCGATTC...TCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCTCTGTGTATTGGAGGTaGCAGACGGTCCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILISVYWR*QTVLSC
Trigger: GCAAGAGAGGACCGTCTGGCACCTCCAATACACAGA...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAATTTGGGGATCACTTGTaGTATTTGTATGGCGTCGAA +
Preference number: 4 (lower is better)
Translates to: NVCKYCKPDRPGQGKALEFGDHL*YLYGVE
Trigger: TTCGACGCCATACAAATAGCACAAGTGATCCCCAAA...TTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp AACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGAAATCTCCAAAATGTGTaGAAGTACTGCAAACCGGAC +
Preference number: 4 (lower is better)
Translates to: NPSSACASHVSFSVPPFRNLQNV*KYCKPD
Trigger: GTCCGGTTTGCAGTACTTGCACACATTTTGGAGATT...TCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp AATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAACAGTTTCAACCCAAATaGCAGTGGCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NVCKYCKPDRPGQGKALEQFQPK*QWHLLL
Trigger: AAGAAGAAGATGCCACTGCCATTTGGGTTGAAACTG...TTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACACAAAGAGGTTATCTTaGGAAGAAGCATATGGTTCT +
Preference number: 4 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHTKRLS*EEAYGS
Trigger: AGAACCATATGCTTCTTCCCAAGATAACCTCTTTGT...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGGAGCTTTTCAGGAACTaGATGAGGACTCTGTACACA +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMELFRN*MRTLYT
Trigger: TGTGTACAGAGTCCTCATCCAGTTCCTGAAAAGCTC...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp GTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAGCAACTCATATCTGTaGATCATCCTTACACAAAGT +
Preference number: 4 (lower is better)
Translates to: VCKYCKPDRPGQGKALETSNSYL*IILTQS
Trigger: ACTTTGTGTAAGGATGATCCACAGATATGAGTTGCT...GGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTAGCGGCCTGACGTGGTaGGGTCGGACTCCGACATGG +
Preference number: 4 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFSGLTW*GRTPTW
Trigger: CCATGTCGGAGTCCGACCTCACCACGTCAGGCCGCT...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTGGCTCGGTAGCGGCCTaGCGTGGTGAGGTCGGACTC +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASGSVAA*RGEVGL
Trigger: GAGTCCGACCTCACCACGTCAGGCCGCTACCGAGCC...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp GCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTATCTGCCAAAAATCTTaGCAGGTATTCTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: ASTANRTDRGRARPLKPSICQKS*QVFCNG
Trigger: ACCATTACAGAATACCTGTCAAGATTTTTGGCAGAT...ACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGGACGGTAGGTTCCAATaGATATTTATCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMDGRFQ*IFIQLL
Trigger: AAGCAGCTGGATAAATATGCATTGGAACCTACCGTC...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR GCA 90 bp AATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAACTAAATACCACAGGATaGCTTCCATTCTTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: NVCKYCKPDRPGQGKALELNTTG*LPFLCF
Trigger: GAAACACAAGAATGGAAGGCATCCTGTGGTATTTAG...TTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CACAAAGAGGTTATCTTGGGAAGAAGCATATGGTTCTGTATAATGTCCATTATAGGCTCGCTGACCTCCTaGAGCGAGTGCGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: HKEVILGRSIWFCIMSIIGSLTS*SECATG
Trigger: GCCCGTGGCGCACTCGCTGCAGGAGGTCAGCGAGCC...TATAATGGACATTATACAGAACCATATGCTTCTTCCCAAGATAACCTCTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTGGGCCTCTGCGGTCGTaGGGACGGGGCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TLMIARIAQHSFSKIENCGPLRS*GRGCCP
Trigger: TGGACAGCAGCCCCGTCCGCACGACCGCAGAGGCCC...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GGCATAGCAGCCAGAGTCTGTGCGGAACCGGGTCGTGATCTTAAACCTTCCATATCCACCCTCCTCTTCTaGTGTCACCATTGCTATAAT +
Preference number: 4 (lower is better)
Translates to: GIAARVCAEPGRDLKPSISTLLF*CHHCYN
Trigger: ATTATAGCAATGGTGACAGCAGAAGAGGAGGGTGGA...TATGGAAGGTTTAAGATCACGACCCGGTTCCGCACAGACTCTGGCTGCTATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp CACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCCAGCTGCTTCTTAGGTTTCGCAGCGAGTaGCTCTGCCGTTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: HHSKIDGRFQCIFIQLLLRFRSE*LCRSAC
Trigger: GCATGCGGAACGGCAGAGCCACTCGCTGCGAAACCT...AAGAAGCAGCTGGATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp AATCTATGCACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGCAGTGTGCGGCCGCTaGCGAGGGGAGCTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: NLCTLMIARIAQHSFSKIAVCGR*RGELCV
Trigger: CACGCACAGCTCCCCTCGCCAGCGGCCGCACACTGC...TATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGTGCATAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AGGCACATAAAACACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCCTGGGACGTGGGCCTTaGGCTCCAGGATGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RHIKHHSKIDGRFQCIFILGRGP*APGCAG
Trigger: CCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAG...GATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTGTTTTATGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCCCTGGAACCAAGTCGTaGCCAGTACCTAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILIPGTKS*PVPKAL
Trigger: AAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGG...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCTGGCGTCGAACAGACTaGATCTCTTCAAGATATGAT +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGWRRTD*ISSRYD
Trigger: ATCATATCTTGAAGAGATCCAGTCTGTTCGACGCCA...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTAACGCTTCACATGACTaGCCCCGTAAGAAATTGTGG +
Preference number: 4 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLNASHD*PRKKLW
Trigger: CCACAATTTCTTACGGGGCCAGTCATGTGAAGCGTT...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCCCCTGTAACTCAGCCTaGCTCTGTCTATTGGGATGT +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILIPCNSA*LCLLGC
Trigger: ACATCCCAATAGACAGAGCCAGGCTGAGTTACAGGG...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTCGCAGACCATTCCCCTaGGCAGAGTCCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASRRPFP*AESGGG
Trigger: GCCACCGCCGGACTCTGCCCAGGGGAATGGTCTGCG...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556564.6
CDS-3UTR TCA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTGCTAAGCCTGCTAGCTaGATTGCTTGTTCTAAGGTA +
Preference number: 4 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLAKPAS*IACSKV
Trigger: TACCTTAGAACAAGCAATTCAGCTAGCAGGCTTAGC...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGGCTAAGCCTGCTAGCTaGATTGCTTGTTCTAAGGTA +
Preference number: 4 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVAKPAS*IACSKV
Trigger: TACCTTAGAACAAGCAATTCAGCTAGCAGGCTTAGC...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACGACGGTAGGTTCCAATaGATATTTATCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADDGRFQ*IFIQLL
Trigger: AAGCAGCTGGATAAATATGCATTGGAACCTACCGTC...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTGTTTGCACCGAGTGGTaGACGCGCCGCGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFVCTEW*TRRVMR
Trigger: CCTCATCACGCGGCGCGTGCACCACTCGGTGCAAAC...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp CACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCCAGCTGCTTCTTGTCCCAGTGCCACGCTaGGTGGATCAAGTGTCAACG +
Preference number: 4 (lower is better)
Translates to: HHSKIDGRFQCIFIQLLLVPVPR*VDQVST
Trigger: CGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC...AAGAAGCAGCTGGATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp TGCAAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTGCCGCCATTCAGACTaGGCCACTTACGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CKYLLNTTAISVHKFGLYCRHSD*ATYVPV
Trigger: CACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA...GTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCATGCTGTGGGGTCCCCTaGTCGCCATCCCAGCACCTC +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKACCGVP*SPSQHL
Trigger: GAGGTGCTGGGATGGCGAGCAGGGGACCCCACAGCA...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TCCAAAATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCATTAAGGAGCTAAAATaGAAGTACCTCTTGAATACC +
Preference number: 4 (lower is better)
Translates to: SKMCASTANRTDRGRARPIKELK*KYLLNT
Trigger: GGTATTCAAGAGGTACTTGCATTTTAGCTCCTTAAT...GGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCAAAAAGGACTTGTTGTaGGACATGTTGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGKKDLL*DMLAMS
Trigger: TGACATTGCCAACATGTCCCACAACAAGTCCTTTTT...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTGTGGCGGGACAGGTCTaGCGTGCTGTTGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLMIARIAQHSFSKIENCVAGQV*RAVGGP
Trigger: AGGCCCGCCAACAGCACGCCAGACCTGTCCCGCCAC...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCACTGGGACGTGGGCCTTaGGCTCCAGGATGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKALGRGP*APGCAG
Trigger: CCCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAG...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGCTTGTGCTATTTGTATaGCGTCGAACAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVLVLFV*RRTDWI
Trigger: GATCCAGTCTGTTCGACGCCATACAAATAGCACAAG...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCAACGCTTCACATGACTaGCCCCGTAAGAAATTGTGG +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILINASHD*PRKKLW
Trigger: CCACAATTTCTTACGGGGCCAGTCATGTGAAGCGTT...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGAACGCTTCACATGACTaGCCCCGTAAGAAATTGTGG +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQNASHD*PRKKLW
Trigger: CCACAATTTCTTACGGGGCCAGTCATGTGAAGCGTT...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGCTCTGTGCACAAATTTaGACTGTACTTTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTLCAQI*TVLFGR
Trigger: TCTCCCAAAAAGTACAGTCCAAATTTGTGCACAGAG...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGGCTCTGTCTATTaGGATGTGCCTAAATGGGAT +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQPGSVY*DVPKWD
Trigger: ATCCCATTTAGGCACATCCCAATAGACAGAGCCAGG...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGACAAGGCCATCTTAATCTTCCTCTTAGGTGGTTaGTTTCTGGGTAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: YPTHPCLLSGHCDKAILIFLLGG*FLGKAE
Trigger: CTCTGCCTTACCCAGAAACCAACCACCTAAGAGGAA...GATTAAGATGGCCTTGTCACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TTCAAGACACGCTCCAATGGATATGTCACTTCCTTGGCTATCCTTAGCAGGGTATCTCCACGGACAGGGTaGACTCCACAAACTCGTTAT +
Preference number: 4 (lower is better)
Translates to: FKTRSNGYVTSLAILSRVSPRTG*TPQTRY
Trigger: ATAACGAGTTTGTGGAGTTCACCCTGTCCGTGGAGA...TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGGTCAACGGGAAAGTATaGGTTAGGCAAGCGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQVNGKV*VRQALF
Trigger: AAAAAGCGCTTGCCTAACTCATACTTTCCCGTTGAC...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACTTCTGCTGTCACCATTaGTATAATTGCAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADFCCHH*YNCNSL
Trigger: CAGGGAATTGCAATTATAGCAATGGTGACAGCAGAA...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCATTAAGGAGCTAAAATaGAAGTACCTCTTGAATACC +
Preference number: 4 (lower is better)
Translates to: RLETPLQPVLRTFPSACRIKELK*KYLLNT
Trigger: GGTATTCAAGAGGTACTTGCATTTTAGCTCCTTAAT...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTCAAGACACGCTCCAATGGATATGTCACTTCCTTGGCTATCCTTAGCAGGGTACCGTTGAGGTCAATCTaGGCTCTATCCAAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: FKTRSNGYVTSLAILSRVPLRSI*ALSKLV
Trigger: GACAAGCTTGGATAGAGCCCAGATTGACCTCAACGG...TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCCATTGGAGCGTGTCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTTCCGCGTCTGGGACGTaGGCCTTGGGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: TLMIARIAQHSFSKIENCSASGT*ALGSRM
Trigger: CATCCTGGAGCCCAAGGCCCACGTCCCAGACGCGGA...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTGGTCGGACTCCGACATaGAGGGCATCAGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASGRTPT*RASAAR
Trigger: ACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACC...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGGAGCTTTTCAGGAACTaGATGAGGACTCTGTACACA +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQELFRN*MRTLYT
Trigger: TGTGTACAGAGTCCTCATCCAGTTCCTGAAAAGCTC...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR GCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTGGTGGCCGGTACACCTaGGTCCGCATGATGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASGGRYT*VRMMLG
Trigger: TCCCAACATCATGCGGACGCAGGTGTACCGGCCACC...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTGCGATCCTCTCCGGATaGGACGAACACTGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TLMIARIAQHSFSKIENCAILSG*DEHCPA
Trigger: GGCCGGACAGTGTTCGTCCCATCCGGAGAGGATCGC...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGCAGTTTGAAATTGAATaGTCTCCTCTTTATTTGCCA +
Preference number: 4 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTQFEIE*SPLYLP
Trigger: TGGCAAATAAAGAGGAGACCATTCAATTTCAAACTG...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCACACAGTCTCATAGTCTaGGGTGGGGCGGTAGGACGG +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKAHSLIV*GGAVGR
Trigger: CCGTCCTACCGCCCCACCCCAGACTATGAGACTGTG...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCAAGGTTTCGCAGCGAGTaGCTCTGCCGTTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKARFRSE*LCRSAC
Trigger: GCATGCGGAACGGCAGAGCCACTCGCTGCGAAACCT...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCCAGCTGCTTCTTTCATCTTCAGGCCTGTaGTGGCATAGCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HHSKIDGRFQCIFIQLLLSSSGL*WHSSQS
Trigger: ACTCTGGCTGCTATGCCACCACAGGCCTGAAGATGA...AAGAAGCAGCTGGATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGAACAAGGCAAATTTCTaGAGAAAGTCCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: LETKSSLSTFPRLETPLQNKANF*RKSWDS
Trigger: TGAATCCCAGGACTTTCTTCAGAAATTTGCCTTGTT...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp TGCAAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTGTGGGAGCTTAGATaGGCCTGGAGCTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: CKYLLNTTAISVHKFGLYLWELR*AWSFSG
Trigger: TCCTGAAAAGCTCCAGGCTCATCTAAGCTCCCACAA...GTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp AATCTATGCACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGGCGGTCACAGGACTTaGATTCCCTGGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: NLCTLMIARIAQHSFSKIGGHRT*IPWGQC
Trigger: GCACTGTCCCCAGGGAATTCAAGTCCTGTGACCGCC...TATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGTGCATAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TGCAAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACGGAGTTGGTGCTGTGTaGACTGTAGACACTGCCATT +
Preference number: 4 (lower is better)
Translates to: CKYLLNTTAISVHKFGLYGVGAV*TVDTAI
Trigger: AATGGCAGTGTCTACAGTGCACACAGCACCAACTCC...GTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AGGCACATAAAACACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCGACAGGGACTTCTTATaGCCGTACCTCAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RHIKHHSKIDGRFQCIFIDRDFL*PYLKPS
Trigger: GGAGGGCTTGAGGTACGGCCATAAGAAGTCCCTGTC...GATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTGTTTTATGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp AGGCACATAAAACACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCTCTTCAGGCCTGTGGTaGCATAGCAGCCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: RHIKHHSKIDGRFQCIFISSGLW*HSSQSL
Trigger: CAGACTCTGGCTGCTATGCCACCACAGGCCTGAAGA...GATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTGTTTTATGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
3UTR CAA 72 bp CAAAGGTTTTTCCAAATCTACCCACCGGCGCTGATTTaGCTTGTTGTAGTACCAGAGGCTGAAGTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: QRFFQIYPPALI*LVVVPEAEVSD
Trigger: GTCACTTACTTCAGCCTCTGGTACTACAACAAGCAAAATCAGCGCCGGTGGGTAGATTTGGAAAAACCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR TCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTAATCGGGGCCAGAGATaGCACTCTCCCCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASNRGQR*HSPPVT
Trigger: AGTTACAGGGGGAGAGTGTCATCTCTGGCCCCGATT...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CACAAAGAGGTTATCTTGGGAAGAAGCATATGGTTCTGTATAATGTCCATTATAGGCCAGTCTGTGTATTaGAGGTGCCAGACGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HKEVILGRSIWFCIMSIIGQSVY*RCQTVL
Trigger: GAGGACCGTCTGGCACCTCCAATACACAGACTGGCC...TATAATGGACATTATACAGAACCATATGCTTCTTCCCAAGATAACCTCTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp AATCTATGCACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATACAGTGCCACGCTGCGTaGATCAAGTGTCAACGGGAA +
Preference number: 4 (lower is better)
Translates to: NLCTLMIARIAQHSFSKIQCHAA*IKCQRE
Trigger: TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTG...TATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGTGCATAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
3UTR CAA 72 bp CAAAATCCGCTTGAACAGCTAAGCCTGCTAGCTGAATaGCTTGTTCTAAGGTACAAGGAATACTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QNPLEQLSLLAE*LVLRYKEYFLP
Trigger: TGGAAGGAAGTATTCCTTGTACCTTAGAACAAGCAATTCAGCTAGCAGGCTTAGCTGTTCAAGCGGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTTGCCCAGTAAGGAGGTaGTTCATCTTCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TLMIARIAQHSFSKIENCCPVRR*FIFRPV
Trigger: CACAGGCCTGAAGATGAAGCACCTCCTTACTGGGCA...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCAAGACCTCCTCCTGATTaGGTTCACTGTGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKARPPPD*VHCDSL
Trigger: CAGACTGTCACAGTGAACCCAATCAGGAGGAGGTCT...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp CACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCCAGCTGCTTCTTGTTGTTTTCTTTAGTTaGGACCAACTCCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: HHSKIDGRFQCIFIQLLLVVFFS*DQLHSH
Trigger: GTGAGAGTGGAGTTGGTCCCAACTAAAGAAAACAAC...AAGAAGCAGCTGGATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CCA 90 bp TGCAAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACGTTGTTTTCTTTAGTTaGGACCAACTCCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: CKYLLNTTAISVHKFGLYVVFFS*DQLHSH
Trigger: GTGAGAGTGGAGTTGGTCCCAACTAAAGAAAACAAC...GTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp CACAAAGAGGTTATCTTGGGAAGAAGCATATGGTTCTGTATAATGTCCATTATATGTTTGAGGATGCATTaGGCTATGACGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: HKEVILGRSIWFCIMSIICLRMH*AMTVPL
Trigger: CAGTGGCACCGTCATAGCTCAATGCATCCTCAAACA...TATAATGGACATTATACAGAACCATATGCTTCTTCCCAAGATAACCTCTTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCACTGTCTATTGGGATGTaGCTAAATGGGATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKALSIGM*LNGMGE
Trigger: CTCACCCATCCCATTTAGGCACATCCCAATAGACAG...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp AGGCACATAAAACACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCAGCCCTCTGTATTTCTaGTGTAGTAAGGCCACTTTT +
Preference number: 4 (lower is better)
Translates to: RHIKHHSKIDGRFQCIFISPLYF*CSKATF
Trigger: AAAAGTGGCCTTACTACATCAGAAATACAGAGGGCT...GATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTGTTTTATGTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR GCA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTTTTGGGGATCACTTGTaGTATTTGTATGGCGTCGAA +
Preference number: 4 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFFGDHL*YLYGVE
Trigger: TTCGACGCCATACAAATAGCACAAGTGATCCCCAAA...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTAATCTCCAAAATGTGTaGAAGTACTGCAAACCGGAC +
Preference number: 4 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFNLQNV*KYCKPD
Trigger: GTCCGGTTTGCAGTACTTGCACACATTTTGGAGATT...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCAGAGCTTTTCAGGAACTaGATGAGGACTCTGTACACA +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKAELFRN*MRTLYT
Trigger: TGTGTACAGAGTCCTCATCCAGTTCCTGAAAAGCTC...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AATCTATGCACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATACCTGGCTCTGTCTATTaGGATGTGCCTAAATGGGAT +
Preference number: 4 (lower is better)
Translates to: NLCTLMIARIAQHSFSKIPGSVY*DVPKWD
Trigger: ATCCCATTTAGGCACATCCCAATAGACAGAGCCAGG...TATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGTGCATAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTAAGGCAGAGTTAGGCTaGTGCACACACTATTTAGGA +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASKAELG*CTHYLG
Trigger: TCCTAAATAGTGTGTGCACCAGCCTAACTCTGCCTT...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTATTCTCTCTACCTCCTaGATGTACAGCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASILSTS*MYSISA
Trigger: TGCTGAAATGCTGTACATGCAGGAGGTAGAGAGAAT...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTATGTTGGCAATGTCATaGCACCTAAATACCACAGGA +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASMLAMS*HLNTTG
Trigger: TCCTGTGGTATTTAGGTGGCATGACATTGCCAACAT...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp AATCTATGCACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATATCCACCCTCCTCTTCTaGTGTCACCATTGCTATAAT +
Preference number: 4 (lower is better)
Translates to: NLCTLMIARIAQHSFSKISTLLF*CHHCYN
Trigger: ATTATAGCAATGGTGACAGCAGAAGAGGAGGGTGGA...TATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGTGCATAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTGATTATTTAAGGAGTTaGTGCTGTGTGCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFDYLRS*CCVHCR
Trigger: TCTACAGTGCACACAGCACCAACTCCTTAAATAATC...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCATGGCGTCGAACAGACTaGATCTCTTCAAGATATGAT +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKAWRRTD*ISSRYD
Trigger: ATCATATCTTGAAGAGATCCAGTCTGTTCGACGCCA...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR GCA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCACTAAATACCACAGGATaGCTTCCATTCTTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKALNTTG*LPFLCF
Trigger: GAAACACAAGAATGGAAGGCATCCTGTGGTATTTAG...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTGTAATGGTCCCTGTGTaGCAATATAATCCCATTCGA +
Preference number: 4 (lower is better)
Translates to: TLMIARIAQHSFSKIENCVMVPV*QYNPIR
Trigger: TCGAATGGGATTATATTGCCACACAGGGACCATTAC...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR TCA 90 bp AATCTATGCACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAAGAGACCTTAATATGTaGTGCGTTGATGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: NLCTLMIARIAQHSFSKIRDLNM*CVDVTS
Trigger: ACTGGTTACATCAACGCATCACATATTAAGGTCTCT...TATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGTGCATAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTAAAAAGGACTTGTTGTaGGACATGTTGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: TLMIARIAQHSFSKIENCKKDLL*DMLAMS
Trigger: TGACATTGCCAACATGTCCCACAACAAGTCCTTTTT...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CCA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTACAAAGAGGTTATCTTaGGAAGAAGCATATGGTTCT +
Preference number: 4 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASTKRLS*EEAYGS
Trigger: AGAACCATATGCTTCTTCCCAAGATAACCTCTTTGT...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
3UTR CAA 72 bp GAGCAACTCATATCTGTGGATCATCCTTACACAAAGTaGTTTCTCACTAGAAAAATCCCTAAATATTTGTCA +
Preference number: 4 (lower is better)
Translates to: EQLISVDHPYTK*FLTRKIPKYLS
Trigger: TGACAAATATTTAGGGATTTTTCTAGTGAGAAACAACTTTGTGTAAGGATGATCCACAGATATGAGTTGCTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CACGCTGACCGCGCCCACCACGGGCCGCCGCTCGGCAGGGTAGGGGTAGGGAGAAGGCCAGTCTGTGTATaGGAGGTGCCAGACGGTCCT +
Preference number: 5 (lower is better)
Translates to: HADRAHHGPPLGRVGVGRRPVCV*EVPDGP
Trigger: AGGACCGTCTGGCACCTCCAATACACAGACTGGCCT...TCTCCCTACCCCTACCCTGCCGAGCGGCGGCCCGTGGTGGGCGCGGTCAGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS TCA 90 bp GCCGCGGCCCAGAAGGGGAGGCGGGCGAGGTCTTCCACGCCATCCTaGGTTAATGAGCGGCCGGAGGCAACAAACCCAAGAAGCCCACGG +
Preference number: 5 (lower is better)
Translates to: AAAQKGRRARSSTPS*VNERPEATNPRSPR
Trigger: CCGTGGGCTTCTTGGGTTTGTTGCCTCCGGCCGCTCATTAACTCAGGATGGCGTGGAAGACCTCGCCCGCCTCCCCTTCTGGGCCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554628.5
ENST00000555243.1
CDS-3UTR CAA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAGCCTGCAGCTGCGCATaGGTCAGCTCCGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGACSCA*VSSGTL
Trigger: CAGCGTGCCGGAGCTGACCAATGCGCAGCTGCAGGC...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATTCTGGGACGTGGGCCTaGGGCTCCAGGATGTGCAGG +
Preference number: 5 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDSGTWA*GSRMCR
Trigger: CCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGA...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS CCA 90 bp CACCCAGCAGCCGCTGCCGCCATTAAAAAGCAACGGAGTCTCCAATaGCCCGAGGAAGGGAGCATTGACGCCAGCGCTGCTCCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: HPAAAAAIKKQRSLQ*PEEGSIDASAAPAP
Trigger: GGGAGCGGGAGCAGCGCTGGCGTCAATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTGCTTTTTAATGGCGGCAGCGGCTGCTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556564.6
CDS-3UTR CAA 90 bp CCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCTCGATGCTGTTCCGTTaGTGCAGCTGCGCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: PSACRHSDCATYVPVPRCSMLFR*CSCAWR
Trigger: GCGCCACGCGCAGCTGCACAAACGGAACAGCATCGA...GCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCGATGCTGTTCCGTTaGTGCAGCTGCGCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGSMLFR*CSCAWR
Trigger: GCGCCACGCGCAGCTGCACAAACGGAACAGCATCGA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCGATAGGGTGCGCTCCTaGAGCCGCAGGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPDRVRS*SRRPSR
Trigger: CCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTATC...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS CCA 90 bp CACCCAGCAGCCGCTGCCGCCATTAAAAAGCAACGGAGTCTCCAATaGCCCGAGGAAGGGAGCATTGACGCCAGCGCTAAGCGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: HPAAAAAIKKQRSLQ*PEEGSIDASAKRSR
Trigger: GCGGCTCCGCTTAGCGCTGGCGTCAATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTGCTTTTTAATGGCGGCAGCGGCTGCTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554628.5
CDS-3UTR CAA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACCCGGTGATGCTAGGGTaGGACGACATCGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: SACASHVSFSVPPFRLRHPVMLG*DDIGEG
Trigger: GCCCTCGCCGATGTCGTCCAACCCTAGCATCACCGG...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCCCGGTGATGCTAGGGTaGGACGACATCGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: KPDRPGQGKALETKSSLSPVMLG*DDIGEG
Trigger: GCCCTCGCCGATGTCGTCCAACCCTAGCATCACCGG...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCGCCTGCAGCTGCGCATaGGTCAGCTCCGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVACSCA*VSSGTL
Trigger: CAGCGTGCCGGAGCTGACCAATGCGCAGCTGCAGGC...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCCCGAGGAAGGGAGCATaGACGCCAGCGCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVPRKGA*TPALLP
Trigger: CGGGAGCAGCGCTGGCGTCAATGCTCCCTTCCTCGG...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556564.6
CDS-3UTR CAA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCGCCTGCAGCTGCGCATaGGTCAGCTCCGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: PRLETPLQPVLRTFPSACACSCA*VSSGTL
Trigger: CAGCGTGCCGGAGCTGACCAATGCGCAGCTGCAGGC...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCGATAGGGTGCGCTCCTaGAGCCGCAGGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RLETPLQPVLRTFPSACRDRVRS*SRRPSR
Trigger: CCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTATC...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TCCGCCTCCTCCGGCCCTTCTCGCTGTGTCCTCTCGGTGAAAACGCTGGGCTGGATGTCCAGCACCTCATaGTGTTCCAGGCAGGCGATC +
Preference number: 5 (lower is better)
Translates to: SASSGPSRCVLSVKTLGWMSSTS*CSRQAI
Trigger: GATCGCCTGCCTGGAACACAATGAGGTGCTGGACAT...CCAGCCCAGCGTTTTCACCGAGAGGACACAGCGAGAAGGGCCGGAGGAGGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp GAGGCGCCCGGGCCCCGCTCTCCTCCTCGAAGTCCTCGTCCTCCTCCTCCTCGCCACAAAGAGGTTATCTaGGGAAGAAGCATATGGTTC +
Preference number: 5 (lower is better)
Translates to: EAPGPRSPPRSPRPPPPRHKEVI*GRSIWF
Trigger: GAACCATATGCTTCTTCCCAAGATAACCTCTTTGTG...GCGAGGAGGAGGAGGACGAGGACTTCGAGGAGGAGAGCGGGGCCCGGGCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp CGGCCTGACGTGGTGAGGTCGGACTCCGACATGGAGGGCATCAGCAGCCCGTCTTTACGGATCCGACCGTaGAGGTCAATCTGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: RPDVVRSDSDMEGISSPSLRIRP*RSIWAL
Trigger: TAGAGCCCAGATTGACCTCAACGGTCGGATCCGTAA...AGACGGGCTGCTGATGCCCTCCATGTCGGAGTCCGACCTCACCACGTCAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCGATAGGGTGCGCTCCTaGAGCCGCAGGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGDRVRS*SRRPSR
Trigger: CCTGGAGGGCCTGCGGCTCAAGGAGCGCACCCTATC...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTCCAGACGGTCCTCTCTaGCCCAGTAAGGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRPDGPL*PSKEVL
Trigger: AAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTGG...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp TCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGAGGCCAGTCTGTGTATaGGAGGTGCCAGACGGTCCT +
Preference number: 5 (lower is better)
Translates to: SFSVPPFRLRHLRPSATLRPVCV*EVPDGP
Trigger: AGGACCGTCTGGCACCTCCAATACACAGACTGGCCT...CAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGAACCAACAACGGAGGGTaGGGGCTTTGGGGATCACTT +
Preference number: 5 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGTNNGG*GLWGSL
Trigger: AAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGT...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp GCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATACCAACAACGGAGGGTaGGGGCTTTGGGGATCACTT +
Preference number: 5 (lower is better)
Translates to: ACRHSDCATYVPVPRCVDTNNGG*GLWGSL
Trigger: AAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGT...ATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS CCA 90 bp CACCCAGCAGCCGCTGCCGCCATTAAAAAGCAACGGAGTCTCCAATaGCCCGAGGAAGGGAGCATTGACGCCAGCGCACTAGAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: HPAAAAAIKKQRSLQ*PEEGSIDASALEEW
Trigger: CCACTCTTCTAGTGCGCTGGCGTCAATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTGCTTTTTAATGGCGGCAGCGGCTGCTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555243.1
CDS-3UTR CAA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAATGCACCAGGCCCCTGTaGAGCTGCTTCATCACAGTC +
Preference number: 5 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQCTRPL*SCFITV
Trigger: GACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGCA...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTACGAGCTGCCGATGTaGAGGTTTCGCAGCGAGTGG +
Preference number: 5 (lower is better)
Translates to: SACASHVSFSVPPFRLRHYELPM*RFRSEW
Trigger: CCACTCGCTGCGAAACCTCAACATCGGCAGCTCGTA...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGTACGAGCTGCCGATGTaGAGGTTTCGCAGCGAGTGG +
Preference number: 5 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATYELPM*RFRSEW
Trigger: CCACTCGCTGCGAAACCTCAACATCGGCAGCTCGTA...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp GGCCACCTCGATGCTGTTCCGTTTGTGCAGCTGCGCGTGGCGCGCGGCGGTGAGGATCACTTGTGCTATTaGTATGGCGTCGAACAGACT +
Preference number: 5 (lower is better)
Translates to: GHLDAVPFVQLRVARGGEDHLCY*YGVEQT
Trigger: AGTCTGTTCGACGCCATACAAATAGCACAAGTGATC...CTCACCGCCGCGCGCCACGCGCAGCTGCACAAACGGAACAGCATCGAGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp TCCGCCTCCTCCGGCCCTTCTCGCTGTGTCCTCTCGGTGAAAACGCTGGGCTGGGGCTTTGGGGATCACTaGTGCTATTTGTATGGCGTC +
Preference number: 5 (lower is better)
Translates to: SASSGPSRCVLSVKTLGWGFGDH*CYLYGV
Trigger: GACGCCATACAAATAGCACAAGTGATCCCCAAAGCC...CCAGCCCAGCGTTTTCACCGAGAGGACACAGCGAGAAGGGCCGGAGGAGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTATGTCCAGCACCTCATaGTGTTCCAGGCAGGCGATC +
Preference number: 5 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRMSSTS*CSRQAI
Trigger: GATCGCCTGCCTGGAACACAATGAGGTGCTGGACAT...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGCAGCATCATTCTCTGTaGCCTCAGCATGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAAQHHSL*PQHVQH
Trigger: GTGCTGGACATGCTGAGGCAACAGAGAATGATGCTG...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp GCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCTGGCGGTCACAGGACTaGAATTCCCTGGGGACAGTG +
Preference number: 5 (lower is better)
Translates to: ASHVSFSVPPFRLRHLRPWRSQD*NSLGTV
Trigger: CACTGTCCCCAGGGAATTCAAGTCCTGTGACCGCCA...GGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGGCGGTCACAGGACTaGAATTCCCTGGGGACAGTG +
Preference number: 5 (lower is better)
Translates to: FPSACRHSDCATYVPVPRWRSQD*NSLGTV
Trigger: CACTGTCCCCAGGGAATTCAAGTCCTGTGACCGCCA...GCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp ACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGGCCAGTCTGTGTATaGGAGGTGCCAGACGGTCCT +
Preference number: 5 (lower is better)
Translates to: TAPLTSQCHAAWIKCQRERPVCV*EVPDGP
Trigger: AGGACCGTCTGGCACCTCCAATACACAGACTGGCCT...TTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp AACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACCAGACGGTCCTCTCTaGCCCAGTAAGGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: NPSSACASHVSFSVPPFRPDGPL*PSKEVL
Trigger: AAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTGG...TCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCACCAGACGGTCCTCTCTaGCCCAGTAAGGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSPDGPL*PSKEVL
Trigger: AAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTGG...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCAGGCCAGTCTGTGTATaGGAGGTGCCAGACGGTCCT +
Preference number: 5 (lower is better)
Translates to: RLETPLQPVLRTFPSACRRPVCV*EVPDGP
Trigger: AGGACCGTCTGGCACCTCCAATACACAGACTGGCCT...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCAGCATCATTCTCTGTaGCCTCAGCATGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATQHHSL*PQHVQH
Trigger: GTGCTGGACATGCTGAGGCAACAGAGAATGATGCTG...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACCAGCATCATTCTCTGTaGCCTCAGCATGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SACASHVSFSVPPFRLRHQHHSL*PQHVQH
Trigger: GTGCTGGACATGCTGAGGCAACAGAGAATGATGCTG...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCCTCGTTATTAAGCAGTaGGATCCGGGCAACCAGGCA +
Preference number: 5 (lower is better)
Translates to: KYCKPDRPGQGKALETKSLVIKQ*DPGNQA
Trigger: TGCCTGGTTGCCCGGATCCAACTGCTTAATAACGAG...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCACCACCGGCGCTGATTTaGCTTGTTGTAGTACCAGAG +
Preference number: 5 (lower is better)
Translates to: LRTFPSACRHSDCATYVPPPALI*LVVVPE
Trigger: CTCTGGTACTACAACAAGCAAAATCAGCGCCGGTGG...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp TTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATATGTCACTTCCTaGGCTATCCTTAGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: FSVPPFRLRHLRPSATLRGYVTS*AILSRV
Trigger: TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCC...ACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp TGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGGGCTCTATCCAAGCTaGTCTGAGAGTGACAGTAGT +
Preference number: 5 (lower is better)
Translates to: CRHSDCATYVPVPRCVDQGLYPS*SESDSS
Trigger: ACTACTGTCACTCTCAGACAAGCTTGGATAGAGCCC...TTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGTGCACCAGGCCCCTGTaGAGCTGCTTCATCACAGTC +
Preference number: 5 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMCTRPL*SCFITV
Trigger: GACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGCA...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGTACGAGCTGCCGATGTaGAGGTTTCGCAGCGAGTGG +
Preference number: 5 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMYELPM*RFRSEW
Trigger: CCACTCGCTGCGAAACCTCAACATCGGCAGCTCGTA...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCACAGGGAGTCGTGCTGTaGAGCACTCCCCATCAACTA +
Preference number: 5 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSQGVVL*STPHQL
Trigger: TAGTTGATGGGGAGTGCTCAACAGCACGACTCCCTG...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCACGGAGGGTTGGGGCTTaGGGGATCACTTGTGCTATT +
Preference number: 5 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSRRVGA*GITCAI
Trigger: AATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCG...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp AGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCGGAGGGTTGGGGCTTaGGGGATCACTTGTGCTATT +
Preference number: 5 (lower is better)
Translates to: RLETPLQPVLRTFPSACRRRVGA*GITCAI
Trigger: AATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCG...GCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS CCA 90 bp CACTCTCGGGATGTCCAGCACTGCAGTGGACCAACAACGGAGGGTTaGGGCTTTGGGGATCACTTGTGCTATTTGTATGGCGTCGAACAG +
Preference number: 5 (lower is better)
Translates to: HSRDVQHCSGPTTEG*GFGDHLCYLYGVEQ
Trigger: CTGTTCGACGCCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGACATCCCGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553531.1
CDS-3UTR CAA 90 bp CCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCTTACGGATCCGACCGTaGAGGTCAATCTGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: PRLETPLQPVLRTFPSACLRIRP*RSIWAL
Trigger: TAGAGCCCAGATTGACCTCAACGGTCGGATCCGTAA...GCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp GGCATAGCAGCCAGAGTCTGTGCGGAACCGGGTCGTGATCTTAAACCTTCCATACCAGACGGTCCTCTCTaGCCCAGTAAGGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: GIAARVCAEPGRDLKPSIPDGPL*PSKEVL
Trigger: AAGCACCTCCTTACTGGGCAAGAGAGGACCGTCTGG...TATGGAAGGTTTAAGATCACGACCCGGTTCCGCACAGACTCTGGCTGCTATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCGGCTTTGGGGATCACTaGTGCTATTTGTATGGCGTC +
Preference number: 5 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVGFGDH*CYLYGV
Trigger: GACGCCATACAAATAGCACAAGTGATCCCCAAAGCC...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCGGCTTTGGGGATCACTaGTGCTATTTGTATGGCGTC +
Preference number: 5 (lower is better)
Translates to: VLRTFPSACRHSDCATYVGFGDH*CYLYGV
Trigger: GACGCCATACAAATAGCACAAGTGATCCCCAAAGCC...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGACCAACAACGGAGGGTaGGGGCTTTGGGGATCACTT +
Preference number: 5 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTTNNGG*GLWGSL
Trigger: AAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGT...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp CCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGACCAACAACGGAGGGTaGGGGCTTTGGGGATCACTT +
Preference number: 5 (lower is better)
Translates to: PLTSQCHAAWIKCQRESMTNNGG*GLWGSL
Trigger: AAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGT...CATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGATGTCCAGCACCTCATaGTGTTCCAGGCAGGCGATC +
Preference number: 5 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTMSSTS*CSRQAI
Trigger: GATCGCCTGCCTGGAACACAATGAGGTGCTGGACAT...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TTCTTCCCAGAGAGAAGGTCCGACACCGGCCTTTTCTTCAGAGAGTCCCTCCGGCAGCATCATTCTCTGTaGCCTCAGCATGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: FFPERRSDTGLFFRESLRQHHSL*PQHVQH
Trigger: GTGCTGGACATGCTGAGGCAACAGAGAATGATGCTG...CCGGAGGGACTCTCTGAAGAAAAGGCCGGTGTCGGACCTTCTCTCTGGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp CTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGAGGCCACTTTTTGGGTaGCTTCTTCCAATACTTTTT +
Preference number: 5 (lower is better)
Translates to: LQRAAIQTAPLTSQCHAARPLFG*LLPILF
Trigger: AAAAAGTATTGGAAGAAGCAACCCAAAAAGTGGCCT...CGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCGGATATGTCACTTCCTaGGCTATCCTTAGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVGYVTS*AILSRV
Trigger: TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCC...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATTCCATGTCTTCAGTTaGAAATTGAATGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGFHVFS*KLNGLL
Trigger: GAGGAGACCATTCAATTTCAAACTGAAGACATGGAA...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp GTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCAGCGCCCATTGTTATaGTGTCATCTACAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: VSFSVPPFRLRHLRPSATQRPLL*CHLQSN
Trigger: GTTGCTTTGTAGATGACACAATAACAATGGGCGCTG...CGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACAAGAAACAATACAGGTaGAGGTGGGAAAAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: RFLQRAAIQTAPLTSQCHKKQYR*RWEKPQ
Trigger: TTGGGGCTTTTCCCACCTCAACCTGTATTGTTTCTT...GTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS GCA 90 bp ACAAATGTGTACTGGCAGAGAGTCTGCACCAGCATCATTCTCTGTTaGCTCAGCATGTCCAGCACTCTCGGGATGTCCAGCACTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TNVYWQRVCTSIILC*LSMSSTLGMSSTAV
Trigger: CACTGCAGTGCTGGACATCCCGAGAGTGCTGGACATGCTGAGGCAACAGAGAATGATGCTGGTGCAGACTCTCTGCCAGTACACATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553531.1
CDS-3UTR CAA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAGCCTGCTAGCTGAATaGCTTGTTCTAAGGTACAAG +
Preference number: 5 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVSLLAE*LVLRYK
Trigger: CTTGTACCTTAGAACAAGCAATTCAGCTAGCAGGCT...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCATTGTTGTGGGACATGTaGGCAATGTCATGCCACCTA +
Preference number: 5 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSLLWDM*AMSCHL
Trigger: TAGGTGGCATGACATTGCCAACATGTCCCACAACAA...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp AACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGATTGTTGTGGGACATGTaGGCAATGTCATGCCACCTA +
Preference number: 5 (lower is better)
Translates to: NPSSACASHVSFSVPPFRLLWDM*AMSCHL
Trigger: TAGGTGGCATGACATTGCCAACATGTCCCACAACAA...TCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCGGGCTCTATCCAAGCTaGTCTGAGAGTGACAGTAGT +
Preference number: 5 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGGLYPS*SESDSS
Trigger: ACTACTGTCACTCTCAGACAAGCTTGGATAGAGCCC...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp ACAGTGTTGTGCCTGGAACCAAGTCGTGGCCAGTACCTAAAGCTCTTCTCCCTTCAGGGAGTCGTGCTGTaGAGCACTCCCCATCAACTA +
Preference number: 5 (lower is better)
Translates to: TVLCLEPSRGQYLKLFSLQGVVL*STPHQL
Trigger: TAGTTGATGGGGAGTGCTCAACAGCACGACTCCCTG...AAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCCAGCGCCCATTGTTATaGTGTCATCTACAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVQRPLL*CHLQSN
Trigger: GTTGCTTTGTAGATGACACAATAACAATGGGCGCTG...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCGCTTCTCAGCGCCCATaGTTATTGTGTCATCTACAA +
Preference number: 5 (lower is better)
Translates to: VLRTFPSACRHSDCATYVASQRP*LLCHLQ
Trigger: TTGTAGATGACACAATAACAATGGGCGCTGAGAAGC...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTCTCTGTGCACAAATTaGGACTGTACTTTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SACASHVSFSVPPFRLRHSLCTN*DCTFWE
Trigger: CTCCCAAAAAGTACAGTCCAAATTTGTGCACAGAGA...GTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGACCTAGATTTGACATTTaGGAAGTTCACTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: SVPPFRLRHLRPSATLRGPRFDI*EVHCKK
Trigger: CTTCTTACAGTGAACTTCCAAAATGTCAAATCTAGG...TCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AACCCCTCTTCAGCCTGTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGAAGCCTGCTAGCTGAATaGCTTGTTCTAAGGTACAAG +
Preference number: 5 (lower is better)
Translates to: NPSSACASHVSFSVPPFRSLLAE*LVLRYK
Trigger: CTTGTACCTTAGAACAAGCAATTCAGCTAGCAGGCT...TCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAAGAGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp GTTTTTCCAAATCTACCCACCGGCGCTGATTTTGCTTGTTGTAGTACCAGAGGCTGCACCAGGCCCCTGTaGAGCTGCTTCATCACAGTC +
Preference number: 5 (lower is better)
Translates to: VFPNLPTGADFACCSTRGCTRPL*SCFITV
Trigger: GACTGTGATGAAGCAGCTCAACAGGGGCCTGGTGCA...GCCTCTGGTACTACAACAAGCAAAATCAGCGCCGGTGGGTAGATTTGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp AATGTGTGCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAGATCACTTGTGCTATTaGTATGGCGTCGAACAGACT +
Preference number: 5 (lower is better)
Translates to: NVCKYCKPDRPGQGKALEDHLCY*YGVEQT
Trigger: AGTCTGTTCGACGCCATACAAATAGCACAAGTGATC...TTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGCACACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCTTTGGACTGTACTTTTaGGGAGAAGAGGTGAAAACT +
Preference number: 5 (lower is better)
Translates to: KPDRPGQGKALETKSSLSFGLYF*GEEVKT
Trigger: AGTTTTCACCTCTTCTCCCAAAAAGTACAGTCCAAA...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCTCCTTGAGCGAAACAGCCCTAGATTaGACATTTTGGAAGTTCACT +
Preference number: 5 (lower is better)
Translates to: KPDRPGQGKALETKSSLSETALD*TFWKFT
Trigger: AGTGAACTTCCAAAATGTCAAATCTAGGGCTGTTTC...GCTCAAGGAGGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS TCA 90 bp CTCGAGATCCGGCAATGGATGCCTTTCTCACATAGACGGCACATCTaGAACAGAACCACAACCCTACCCTGCCTTTTTCTCCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: LEIRQWMPFSHRRHI*NRTTTLPCLFLHRS
Trigger: TGACCTGTGGAGAAAAAGGCAGGGTAGGGTTGTGGTTCTGTTTCAGATGTGCCGTCTATGTGAGAAAGGCATCCATTGCCGGATCTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554270.5
CDS CCA 90 bp GCTGGACACCGTGTAGCGCCGGGTGCGTTTCAGTTTCAACCCAAATaGCAGTGGCATCTTCTTCTTTCTTCAAGAATGGAGGAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: AGHRVAPGAFQFQPK*QWHLLLSSRMEEQR
Trigger: TCTTTGCTCCTCCATTCTTGAAGAAAGAAGAAGATGCCACTGCCATTTGGGTTGAAACTGAAACGCACCCGGCGCTACACGGTGTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000554178.1
ENST00000554270.5
ENST00000554628.5
ENST00000555243.1
ENST00000556564.6
CDS-3UTR CAA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCATGGTCTCCTCTTTATTaGCCAGCTCTAATGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LRTFPSACRHSDCATYVPWSPLY*PALMQK
Trigger: TTTTTGCATTAGAGCTGGCAAATAAAGAGGAGACCA...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp GCAAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTGTCTCCAAATGTATTTaGCTGTTTCCATGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: ASTANRTDRGRARPLKPSVSKCI*LFPCLQ
Trigger: CTGAAGACATGGAAACAGCAAAATACATTTGGAGAC...ACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CCATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCTTTGGACTGTACTTTTaGGGAGAAGAGGTGAAAACT +
Preference number: 5 (lower is better)
Translates to: PFRLRHLRPSATLRGSSVFGLYF*GEEVKT
Trigger: AGTTTTCACCTCTTCTCCCAAAAAGTACAGTCCAAA...GACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCCCAGAAACAGCCCTAGATTaGACATTTTGGAAGTTCACT +
Preference number: 5 (lower is better)
Translates to: LRTFPSACRHSDCATYVPETALD*TFWKFT
Trigger: AGTGAACTTCCAAAATGTCAAATCTAGGGCTGTTTC...TGGGACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS TCA 90 bp GCTCTTCTCCCTTCCACCCTCCTGTTAAAGATGAGCATGGTTAAATaGCTCGAGATCCGGCAATGGATGCCTTTCTCACATAGACGGCAC +
Preference number: 5 (lower is better)
Translates to: ALLPSTLLLKMSMVK*LEIRQWMPFSHRRH
Trigger: GTGCCGTCTATGTGAGAAAGGCATCCATTGCCGGATCTCGAGTCATTTAACCATGCTCATCTTTAACAGGAGGGTGGAAGGGAGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554270.5
CDS CCA 90 bp CTTAAACCTTCCATAGGTGACAGTGTTGTGCCTGGAACCAAGTCGTaGCCAGTACCTAAAGCTCTTCTCCCTTCCACCCTCCTGTTAAAG +
Preference number: 5 (lower is better)
Translates to: LKPSIGDSVVPGTKS*PVPKALLPSTLLLK
Trigger: CTTTAACAGGAGGGTGGAAGGGAGAAGAGCTTTAGGTACTGGCCACGACTTGGTTCCAGGCACAACACTGTCACCTATGGAAGGTTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554270.5
CDS-3UTR CAA 90 bp TTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACAGGCCACTTTTTGGGTaGCTTCTTCCAATACTTTTT +
Preference number: 5 (lower is better)
Translates to: FRLRHLRPSATLRGSSVNRPLFG*LLPILF
Trigger: AAAAAGTATTGGAAGAAGCAACCCAAAAAGTGGCCT...GTTGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCATGGTCTCCTCTTTATTaGCCAGCTCTAATGCAAAAA +
Preference number: 5 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSWSPLY*PALMQK
Trigger: TTTTTGCATTAGAGCTGGCAAATAAAGAGGAGACCA...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACGATCACTTGTGCTATTaGTATGGCGTCGAACAGACT +
Preference number: 5 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADDHLCY*YGVEQT
Trigger: AGTCTGTTCGACGCCATACAAATAGCACAAGTGATC...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TATCCAAGCTTGTCTGAGAGTGACAGTAGTATCCGTTCTGGTTGGGCACAAAGACGGAGGGTTGGGGCTTaGGGGATCACTTGTGCTATT +
Preference number: 5 (lower is better)
Translates to: YPSLSESDSSIRSGWAQRRRVGA*GITCAI
Trigger: AATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCG...TCTTTGTGCCCAACCAGAACGGATACTACTGTCACTCTCAGACAAGCTTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp GTGCTTCGCACGTTTCCTTCAGCGTGCCGCCATTCAGACTGCGCCACTTACGTCAACCACCCTAGGCAATaGTTTTTCACTTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: VLRTFPSACRHSDCATYVNHPRQ*FFTSFS
Trigger: TGAAAATGAAGTGAAAAACAATTGCCTAGGGTGGTT...GACGTAAGTGGCGCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AAGTACTGCAAACCGGACAGACCGGGGCAGGGCAAGGCCCTTGAAACCAAGTCCAACCACCCTAGGCAATaGTTTTTCACTTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: KYCKPDRPGQGKALETKSNHPRQ*FFTSFS
Trigger: TGAAAATGAAGTGAAAAACAATTGCCTAGGGTGGTT...GGACTTGGTTTCAAGGGCCTTGCCCTGCCCCGGTCTGTCCGGTTTGCAGTACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CATTCAGACTGCGCCACTTACGTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAAAATGCAAGTACCTCTaGAATACCACAGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: HSDCATYVPVPRCVDQVSKCKYL*NTTAIS
Trigger: AGAGATTGCTGTGGTATTCAAGAGGTACTTGCATTT...TGACACTTGATCCACGCAGCGTGGCACTGGGACGTAAGTGGCGCAGTCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGCCTGTGCTTCGCACGTTCCATGTCTTCAGTTaGAAATTGAATGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SLSTFPRLETPLQPVLRTFHVFS*KLNGLL
Trigger: GAGGAGACCATTCAATTTCAAACTGAAGACATGGAA...CGTGCGAAGCACAGGCTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp GTCCCAGTGCCACGCTGCGTGGATCAAGTGTCAACGGGAAAGTATGAGTTAGGCGTCTCCAAATGTATTTaGCTGTTTCCATGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: VPVPRCVDQVSTGKYELGVSKCI*LFPCLQ
Trigger: CTGAAGACATGGAAACAGCAAAATACATTTGGAGAC...GCCTAACTCATACTTTCCCGTTGACACTTGATCCACGCAGCGTGGCACTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000556564.6
CDS-3UTR CAA 90 bp GGCAGAGTTAGGCTGGTGCACACACTATTTAGGAAGTCCTGTCTCGTGGCTGACCACAAAGAGGTTATCTaGGGAAGAAGCATATGGTTC +
Preference number: 5 (lower is better)
Translates to: GRVRLVHTLFRKSCLVADHKEVI*GRSIWF
Trigger: GAACCATATGCTTCTTCCCAAGATAACCTCTTTGTG...GTCAGCCACGAGACAGGACTTCCTAAATAGTGTGTGCACCAGCCTAACTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCATCTGGGACGTGGGCCTaGGGCTCCAGGATGTGCAGG +
Preference number: 5 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKASGTWA*GSRMCR
Trigger: CCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGA...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGCACAAAGAGGTTATCTaGGGAAGAAGCATATGGTTC +
Preference number: 5 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVHKEVI*GRSIWF
Trigger: GAACCATATGCTTCTTCCCAAGATAACCTCTTTGTG...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CACAAAGAGGTTATCTTGGGAAGAAGCATATGGTTCTGTATAATGTCCATTATATCTGGGACGTGGGCCTaGGGCTCCAGGATGTGCAGG +
Preference number: 5 (lower is better)
Translates to: HKEVILGRSIWFCIMSIISGTWA*GSRMCR
Trigger: CCTGCACATCCTGGAGCCCAAGGCCCACGTCCCAGA...TATAATGGACATTATACAGAACCATATGCTTCTTCCCAAGATAACCTCTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp CTTGAAACCAAGTCCTCCTTGAGCACCTTTCCCAGGTTAGAAACCCCTCTTCAGGCTTCTCAGCGCCCATaGTTATTGTGTCATCTACAA +
Preference number: 5 (lower is better)
Translates to: LETKSSLSTFPRLETPLQASQRP*LLCHLQ
Trigger: TTGTAGATGACACAATAACAATGGGCGCTGAGAAGC...CTGAAGAGGGGTTTCTAACCTGGGAAAGGTGCTCAAGGAGGACTTGGTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGTCTCTGTGCACAAATTaGGACTGTACTTTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVSLCTN*DCTFWE
Trigger: CTCCCAAAAAGTACAGTCCAAATTTGTGCACAGAGA...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGTTCCATGTCTTCAGTTaGAAATTGAATGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVFHVFS*KLNGLL
Trigger: GAGGAGACCATTCAATTTCAAACTGAAGACATGGAA...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTTCGATGCTGTTCCGTTaGTGCAGCTGCGCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: TLMIARIAQHSFSKIENCSMLFR*CSCAWR
Trigger: GCGCCACGCGCAGCTGCACAAACGGAACAGCATCGA...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AGGGTTCCTCAGCTAAATATCCCACTCATCCATGCCTACTCAGCGGTCACTGTGCCTAGATTTGACATTTaGGAAGTTCACTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: RVPQLNIPLIHAYSAVTVPRFDI*EVHCKK
Trigger: CTTCTTACAGTGAACTTCCAAAATGTCAAATCTAGG...CACAGTGACCGCTGAGTAGGCATGGATGAGTGGGATATTTAGCTGAGGAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTTTACGGATCCGACCGTaGAGGTCAATCTGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFLRIRP*RSIWAL
Trigger: TAGAGCCCAGATTGACCTCAACGGTCGGATCCGTAA...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCACAGGGAGTCGTGCTGTaGAGCACTCCCCATCAACTA +
Preference number: 5 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKAQGVVL*STPHQL
Trigger: TAGTTGATGGGGAGTGCTCAACAGCACGACTCCCTG...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTCTCGTTATTAAGCAGTaGGATCCGGGCAACCAGGCA +
Preference number: 5 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASLVIKQ*DPGNQA
Trigger: TGCCTGGTTGCCCGGATCCAACTGCTTAATAACGAG...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp CACAAAGAGGTTATCTTGGGAAGAAGCATATGGTTCTGTATAATGTCCATTATACTCGTTATTAAGCAGTaGGATCCGGGCAACCAGGCA +
Preference number: 5 (lower is better)
Translates to: HKEVILGRSIWFCIMSIILVIKQ*DPGNQA
Trigger: TGCCTGGTTGCCCGGATCCAACTGCTTAATAACGAG...TATAATGGACATTATACAGAACCATATGCTTCTTCCCAAGATAACCTCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp AGGCACATAAAACACCACTCCAAAATAGACGGTAGGTTCCAATGCATATTTATCGGATATGTCACTTCCTaGGCTATCCTTAGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: RHIKHHSKIDGRFQCIFIGYVTS*AILSRV
Trigger: TACCCTGCTAAGGATAGCCAAGGAAGTGACATATCC...GATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTGTTTTATGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp AAGAAGCATATGGTTCTGTATAATGTCCATTATAGTGCAACTGCGGTGGGGGAGTGGTCTCCTCTTTATTaGCCAGCTCTAATGCAAAAA +
Preference number: 5 (lower is better)
Translates to: KKHMVLYNVHYSATAVGEWSPLY*PALMQK
Trigger: TTTTTGCATTAGAGCTGGCAAATAAAGAGGAGACCA...CTCCCCCACCGCAGTTGCACTATAATGGACATTATACAGAACCATATGCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536337.5
CDS-3UTR CAA 90 bp TTAACTATTCCCTTCCTTCAACCAAAAGGAAAAATACGCCTCTTTAAGGCTTCTGGGCTCTATCCAAGCTaGTCTGAGAGTGACAGTAGT +
Preference number: 5 (lower is better)
Translates to: LTIPFLQPKGKIRLFKASGLYPS*SESDSS
Trigger: ACTACTGTCACTCTCAGACAAGCTTGGATAGAGCCC...AGAAGCCTTAAAGAGGCGTATTTTTCCTTTTGGTTGAAGGAAGGGAATAGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TGCAAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACAGGCCACTTTTTGGGTaGCTTCTTCCAATACTTTTT +
Preference number: 5 (lower is better)
Translates to: CKYLLNTTAISVHKFGLYRPLFG*LLPILF
Trigger: AAAAAGTATTGGAAGAAGCAACCCAAAAAGTGGCCT...GTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TGCAAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACGTCTCCAAATGTATTTaGCTGTTTCCATGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CKYLLNTTAISVHKFGLYVSKCI*LFPCLQ
Trigger: CTGAAGACATGGAAACAGCAAAATACATTTGGAGAC...GTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp AATCTATGCACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGGCTTTGGGGATCACTaGTGCTATTTGTATGGCGTC +
Preference number: 5 (lower is better)
Translates to: NLCTLMIARIAQHSFSKIGFGDH*CYLYGV
Trigger: GACGCCATACAAATAGCACAAGTGATCCCCAAAGCC...TATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGTGCATAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328736.7
ENST00000553531.1
ENST00000556564.6
CDS-3UTR CAA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTAAGAAACAATACAGGTaGAGGTGGGAAAAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFKKQYR*RWEKPQ
Trigger: TTGGGGCTTTTCCCACCTCAACCTGTATTGTTTCTT...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS CCA 90 bp CATGTAGAATTTCCTGCCTTCTGGACTTTTCTGATTGTAGTCTCATaGGGTCATTTGGCAAGTTTACATGTTCTCACATCTTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: HVEFPAFWTFLIVVS*GHLASLHVLTSFLK
Trigger: TTTCAGGAAAGATGTGAGAACATGTAAACTTGCCAAATGACCCCATGAGACTACAATCAGAAAAGTCCAGAAGGCAGGAAATTCTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554178.1
CDS-3UTR CAA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCAAGCCTGCTAGCTGAATaGCTTGTTCTAAGGTACAAG +
Preference number: 5 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKASLLAE*LVLRYK
Trigger: CTTGTACCTTAGAACAAGCAATTCAGCTAGCAGGCT...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp ACTTTAATGATTGCCAGAATTGCCCAGCATAGCTTCAGTAAAATAGAGAATTGTTTGTTGTGGGACATGTaGGCAATGTCATGCCACCTA +
Preference number: 5 (lower is better)
Translates to: TLMIARIAQHSFSKIENCLLWDM*AMSCHL
Trigger: TAGGTGGCATGACATTGCCAACATGTCCCACAACAA...ACAATTCTCTATTTTACTGAAGCTATGCTGGGCAATTCTGGCAATCATTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS-3UTR CAA 90 bp TGTTCTTGTCAACGAGCTATGTCAAACTGTTTGTTTAAACCTGACAGAAAAGCAGATCACTTGTGCTATTaGTATGGCGTCGAACAGACT +
Preference number: 5 (lower is better)
Translates to: CSCQRAMSNCLFKPDRKADHLCY*YGVEQT
Trigger: AGTCTGTTCGACGCCATACAAATAGCACAAGTGATC...TGCTTTTCTGTCAGGTTTAAACAAACAGTTTGACATAGCTCGTTGACAAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS CCA 90 bp ATTAACAGAAATGGAGCCATTTGTCATGTAGAATTTCCTGCCTTCTaGACTTTTCTGATTGTAGTCTCATGGGGTCATTTGGCAAGTTTA +
Preference number: 5 (lower is better)
Translates to: INRNGAICHVEFPAF*TFLIVVSWGHLASL
Trigger: TAAACTTGCCAAATGACCCCATGAGACTACAATCAGAAAAGTCCAGAAGGCAGGAAATTCTACATGACAAATGGCTCCATTTCTGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554178.1
CDS-3UTR CAA 90 bp AAGTACCTCTTGAATACCACAGCAATCTCTGTGCACAAATTTGGACTGTACTTTAAATGCAAGTACCTCTaGAATACCACAGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: KYLLNTTAISVHKFGLYFKCKYL*NTTAIS
Trigger: AGAGATTGCTGTGGTATTCAAGAGGTACTTGCATTT...AAAGTACAGTCCAAATTTGTGCACAGAGATTGCTGTGGTATTCAAGAGGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328736.7
ENST00000556564.6
CDS CCA 72 bp GGCTCGCAGACCATTCCCCTGGGCAGAGTCCGGCGGTaGCGACGGCGAGGGGCGAGGCCTGGAGGTGGGACC +
Preference number: 6 (lower is better)
Translates to: GSQTIPLGRVRR*RRRGARPGGGT
Trigger: GGTCCCACCTCCAGGCCTCGCCCCTCGCCGTCGCCACCGCCGGACTCTGCCCAGGGGAATGGTCTGCGAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556564.6
CDS CCA 72 bp CGCACCCGCACGCCAGCCCGGGCCGCGGCGCGCTCATaGGGCTCGCACGCCTCACTTCCTGTCTCCAAAAAC +
Preference number: 6 (lower is better)
Translates to: RTRTPARAAARS*GSHASLPVSKN
Trigger: GTTTTTGGAGACAGGAAGTGAGGCGTGCGAGCCCCATGAGCGCGCCGCGGCCCGGGCTGGCGTGCGGGTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556564.6
CDS CAA 72 bp AGCAACGGAGTCTCCAATGGCCCGAGGAAGGGAGCATaGACGCCAGCGCTAAGCGGAGCCGCGGCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: SNGVSNGPRKGA*TPALSGAAAQK
Trigger: CTTCTGGGCCGCGGCTCCGCTTAGCGCTGGCGTCAATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554628.5
CDS TCA 72 bp AAGAGGGAAAAGCTACCCCCACCAACCCAGCGCTGGTaGCGCCAGGAGAAAGCGATCCTCTCCGGATGGGAC +
Preference number: 6 (lower is better)
Translates to: KREKLPPPTQRW*RQEKAILSGWD
Trigger: GTCCCATCCGGAGAGGATCGCTTTCTCCTGGCGTCACCAGCGCTGGGTTGGTGGGGGTAGCTTTTCCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000554178.1
ENST00000554270.5
ENST00000554628.5
ENST00000555243.1
ENST00000556564.6
CDS TCA 72 bp CAGAAGGGGAGGCGGGCGAGGTCTTCCACGCCATCCTaGGTTAATGAGCGGCCGGAGGCAACAAACCCAAGA +
Preference number: 6 (lower is better)
Translates to: QKGRRARSSTPS*VNERPEATNPR
Trigger: TCTTGGGTTTGTTGCCTCCGGCCGCTCATTAACTCAGGATGGCGTGGAAGACCTCGCCCGCCTCCCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554628.5
ENST00000555243.1
CDS CCA 72 bp GCCGCTGCCGCCATTAAAAAGCAACGGAGTCTCCAATaGCCCGAGGAAGGGAGCATTGACGCCAGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: AAAAIKKQRSLQ*PEEGSIDASAA
Trigger: AGCAGCGCTGGCGTCAATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTGCTTTTTAATGGCGGCAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556564.6
CDS CCA 72 bp GCCGCTGCCGCCATTAAAAAGCAACGGAGTCTCCAATaGCCCGAGGAAGGGAGCATTGACGCCAGCGCTAAG +
Preference number: 6 (lower is better)
Translates to: AAAAIKKQRSLQ*PEEGSIDASAK
Trigger: CTTAGCGCTGGCGTCAATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTGCTTTTTAATGGCGGCAGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554628.5
CDS CCA 72 bp GCCGCTGCCGCCATTAAAAAGCAACGGAGTCTCCAATaGCCCGAGGAAGGGAGCATTGACGCCAGCGCACTA +
Preference number: 6 (lower is better)
Translates to: AAAAIKKQRSLQ*PEEGSIDASAL
Trigger: TAGTGCGCTGGCGTCAATGCTCCCTTCCTCGGGCCATTGGAGACTCCGTTGCTTTTTAATGGCGGCAGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555243.1
CDS GCA 72 bp CCAGGCAACTCTTGCTGGACACCGTGTAGCGCCGGGTaGGTTTCAGTTTCAACCCAAATGGCAGTGGCATCT +
Preference number: 6 (lower is better)
Translates to: PGNSCWTPCSAG*VSVSTQMAVAS
Trigger: AGATGCCACTGCCATTTGGGTTGAAACTGAAACGCACCCGGCGCTACACGGTGTCCAGCAAGAGTTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000554178.1
ENST00000554270.5
ENST00000554628.5
ENST00000555243.1
ENST00000556564.6
CDS CAA 72 bp AGGCTAGCACAGCGGCTAAGAGCACAGGCTCGAGTCTaGCTGCTCCACTTACTAGTTGTGTGGCAGGGCAAG +
Preference number: 6 (lower is better)
Translates to: RLAQRLRAQARV*LLHLLVVWQGK
Trigger: CTTGCCCTGCCACACAACTAGTAAGTGGAGCAGCAAGACTCGAGCCTGTGCTCTTAGCCGCTGTGCTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554628.5
CDS CAA 90 bp GCTCTCCACGGACAGGGTGAACTCCACAAACTCGTTATTAAGCAGTaGGATCCGGGCAACCAGGCAACTCTTGCTGGACACCGTGTAGCG +
Preference number: 6 (lower is better)
Translates to: ALHGQGELHKLVIKQ*DPGNQATLAGHRVA
Trigger: CGCTACACGGTGTCCAGCAAGAGTTGCCTGGTTGCCCGGATCCAACTGCTTAATAACGAGTTTGTGGAGTTCACCCTGTCCGTGGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000554178.1
ENST00000554270.5
ENST00000554628.5
ENST00000555243.1
ENST00000556564.6
CDS CAA 90 bp GCACTCTCGGGATGTCCAGCACTGCAGTGGACCAACAACGGAGGGTaGGGGCTTTGGGGATCACTTGTGCTATTTGTATGGCGTCGAACA +
Preference number: 6 (lower is better)
Translates to: ALSGCPALQWTNNGG*GLWGSLVLFVWRRT
Trigger: TGTTCGACGCCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGACATCCCGAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553531.1
CDS CCA 72 bp GATGTCCAGCACTGCAGTGGACCAACAACGGAGGGTTaGGGCTTTGGGGATCACTTGTGCTATTTGTATGGC +
Preference number: 6 (lower is better)
Translates to: DVQHCSGPTTEG*GFGDHLCYLYG
Trigger: GCCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553531.1
CDS CAA 72 bp GGATGTCCAGCACTGCAGTGGACCAACAACGGAGGGTaGGGGCTTTGGGGATCACTTGTGCTATTTGTATGG +
Preference number: 6 (lower is better)
Translates to: GCPALQWTNNGG*GLWGSLVLFVW
Trigger: CCATACAAATAGCACAAGTGATCCCCAAAGCCCCAACCCTCCGTTGTTGGTCCACTGCAGTGCTGGACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553531.1
CDS CCA 72 bp GACAGGGTGAACTCCACAAACTCGTTATTAAGCAGTTaGATCCGGGCAACCAGGCAACTCTTGCTGGACACC +
Preference number: 6 (lower is better)
Translates to: DRVNSTNSLLSS*IRATRQLLLDT
Trigger: GGTGTCCAGCAAGAGTTGCCTGGTTGCCCGGATCCAACTGCTTAATAACGAGTTTGTGGAGTTCACCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000554178.1
ENST00000554270.5
ENST00000554628.5
ENST00000555243.1
ENST00000556564.6
CDS CAA 72 bp GGACAGGGTGAACTCCACAAACTCGTTATTAAGCAGTaGGATCCGGGCAACCAGGCAACTCTTGCTGGACAC +
Preference number: 6 (lower is better)
Translates to: GQGELHKLVIKQ*DPGNQATLAGH
Trigger: GTGTCCAGCAAGAGTTGCCTGGTTGCCCGGATCCAACTGCTTAATAACGAGTTTGTGGAGTTCACCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328736.7
ENST00000536337.5
ENST00000554178.1
ENST00000554270.5
ENST00000554628.5
ENST00000555243.1
ENST00000556564.6
CDS TCA 72 bp CGGCAATGGATGCCTTTCTCACATAGACGGCACATCTaGAACAGAACCACAACCCTACCCTGCCTTTTTCTC +
Preference number: 6 (lower is better)
Translates to: RQWMPFSHRRHI*NRTTTLPCLFL
Trigger: GAGAAAAAGGCAGGGTAGGGTTGTGGTTCTGTTTCAGATGTGCCGTCTATGTGAGAAAGGCATCCATTGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554270.5
CDS CCA 72 bp CAGGCTCGAGTCTTGCTGCTCCACTTACTAGTTGTGTaGCAGGGCAAGACATTTCACTTCTGTAAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: QARVLLLHLLVV*QGKTFHFCKSP
Trigger: TGGAGACTTACAGAAGTGAAATGTCTTGCCCTGCCACACAACTAGTAAGTGGAGCAGCAAGACTCGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554628.5
CDS CAA 90 bp CTGCTTCTTCAAAGGTTTTTCCAAATCTACCCACCGGCGCTGATTTaGCTTGTTGTAGTACCAGAGGCTGAAGTAAGTGACCTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: LLLQRFFQIYPPALI*LVVVPEAEVSDLPQ
Trigger: CTGCGGGAGGTCACTTACTTCAGCCTCTGGTACTACAACAAGCAAAATCAGCGCCGGTGGGTAGATTTGGAAAAACCTTTGAAGAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328736.7
ENST00000554178.1
ENST00000554270.5
ENST00000554628.5
ENST00000555243.1
ENST00000556564.6
CDS TCA 72 bp CCTTCCACCCTCCTGTTAAAGATGAGCATGGTTAAATaGCTCGAGATCCGGCAATGGATGCCTTTCTCACAT +
Preference number: 6 (lower is better)
Translates to: PSTLLLKMSMVK*LEIRQWMPFSH
Trigger: ATGTGAGAAAGGCATCCATTGCCGGATCTCGAGTCATTTAACCATGCTCATCTTTAACAGGAGGGTGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554270.5
CDS GCA 72 bp ATACACAAATACAACCCCTGTGAAAAGAAGTTTCAATaGACTGAAGACCAGGAACACACAGAGGGAGTGTTC +
Preference number: 6 (lower is better)
Translates to: IHKYNPCEKKFQ*TEDQEHTEGVF
Trigger: GAACACTCCCTCTGTGTGTTCCTGGTCTTCAGTGCATTGAAACTTCTTTTCACAGGGGTTGTATTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557249.1
CDS GCA 72 bp AGAGAAATAAGTACCTACCTCTTCTGCTGTCACCATTaGTATAATTGCAATTCCCTGTTCCCATACCATCTG +
Preference number: 6 (lower is better)
Translates to: REISTYLFCCHH*YNCNSLFPYHL
Trigger: CAGATGGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTACTTATTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554270.5
CDS CCA 72 bp TTTCCTGCCTTCTGGACTTTTCTGATTGTAGTCTCATaGGGTCATTTGGCAAGTTTACATGTTCTCACATCT +
Preference number: 6 (lower is better)
Translates to: FPAFWTFLIVVS*GHLASLHVLTS
Trigger: AGATGTGAGAACATGTAAACTTGCCAAATGACCCCATGAGACTACAATCAGAAAAGTCCAGAAGGCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554178.1
CDS CAA 72 bp TTCTGGACTTTTCTGATTGTAGTCTCATGGGGTCATTaGGCAAGTTTACATGTTCTCACATCTTTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: FWTFLIVVSWGH*ASLHVLTSFLK
Trigger: TTTCAGGAAAGATGTGAGAACATGTAAACTTGCCAAATGACCCCATGAGACTACAATCAGAAAAGTCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554178.1