RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158079

Ensembl transcript IDs: ENST00000288976.3, ENST00000375360.7, ENST00000467049.1, ENST00000620992.5, ENST00000650567.1

Found 715 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGCAGGGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTaGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAACT +
Preference number: 1 (lower is better)
Translates to: RAGLAQSPCPARISL*SPREDRGKPCFLAT
Trigger: AGTTGCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCCCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CCA 90 bp AGAGTCACCTCTGCAGAGTGGCTGTGGCATCTGAGAGAGCAGGGCTaGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCC +
Preference number: 1 (lower is better)
Translates to: RVTSAEWLWHLREQG*HRAPALHEYPCGVP
Trigger: GGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCCCTGCTCTCTCAGATGCCACAGCCACTCTGCAGAGGTGACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR GCA 90 bp GCAGCAACCCAAGGGAGTGGGAATAAGGCTTGGTGTGTTGAGAACTaGTCCTGCCTCCTTTTGACAGCCAAGGCTGGCAAGGTTGTTTGG +
Preference number: 1 (lower is better)
Translates to: AATQGSGNKAWCVEN*SCLLLTAKAGKVVW
Trigger: CCAAACAACCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTATTCCCACTCCCTTGGGTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CCA 90 bp GCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTaGCCCAGTTTTGACTTCCTCCAGCTCCAAGAGTCACCTCTGCAG +
Preference number: 1 (lower is better)
Translates to: ARATLLMLIHHQYKQ*PSFDFLQLQESPLQ
Trigger: CTGCAGAGGTGACTCTTGGAGCTGGAGGAAGTCAAAACTGGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR GCA 90 bp ACCCAAGGGAGTGGGAATAAGGCTTGGTGTGTTGAGAACTGCTCCTaGCTCCTTTTGACAGCCAAGGCTGGCAAGGTTGTTTGGAAATCT +
Preference number: 1 (lower is better)
Translates to: TQGSGNKAWCVENCS*LLLTAKAGKVVWKS
Trigger: AGATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTATTCCCACTCCCTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR TCA 90 bp GTGGGAATAAGGCTTGGTGTGTTGAGAACTGCTCCTGCCTCCTTTTaGCAGCCAAGGCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGC +
Preference number: 1 (lower is better)
Translates to: VGIRLGVLRTAPASF*QPRLARLFGNLTKS
Trigger: GCTCTTTGTCAGATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CCA 90 bp CCTTCTTTCCCAGGCCAGGCACTTGAAAATAAGACATTTCAGGGATaGGCAACCCACTCCATTAACATCCACTGGACTCAATTTCCCAAG +
Preference number: 1 (lower is better)
Translates to: PSFPGQALENKTFQG*ATHSINIHWTQFPK
Trigger: CTTGGGAAATTGAGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTCAAGTGCCTGGCCTGGGAAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTGGTGTGTTGAGAACTaGTCCTGCCTCCTTTTGACA +
Preference number: 2 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRWCVEN*SCLLLT
Trigger: TGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCTGGCACAGAGCCCCTaGCCTGCACGAATATCCCTG +
Preference number: 2 (lower is better)
Translates to: GARATLLMLIHHQYKQWPLAQSP*PARISL
Trigger: CAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCACAGAGCCCCTGCCCTaGACGAATATCCCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: GARATLLMLIHHQYKQWPTEPLP*TNIPVE
Trigger: CTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTGTAAAGATGCTATTTaGCTCAGCAGCAACCCAAGG +
Preference number: 2 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRCKDAI*LSSNPR
Trigger: CCTTGGGTTGCTGCTGAGCCAAATAGCATCTTTACA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTTTGACAGCCAAGGCTaGCAAGGTTGTTTGGAAATC +
Preference number: 2 (lower is better)
Translates to: LPCTNIPVESPGGQRQALFDSQG*QGCLEI
Trigger: GATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGTTGAGAACTGCTCCTaGCTCCTTTTGACAGCCAAG +
Preference number: 2 (lower is better)
Translates to: GARATLLMLIHHQYKQWPVENCS*LLLTAK
Trigger: CTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAAC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGCTGGCAAGGTTGTTTaGAAATCTGACAAAGAGCAA +
Preference number: 2 (lower is better)
Translates to: LPCTNIPVESPGGQRQALAGKVV*KSDKEQ
Trigger: TTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGCAGATTTGGGAGTGTaGGGCCAGGGCCACGCTGCT +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVADLGV*GQGHAA
Trigger: AGCAGCGTGGCCCTGGCCCCACACTCCCAAATCTGC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGCAGATTTGGGAGTGTaGGGCCAGGGCCACGCTGCT +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYADLGV*GQGHAA
Trigger: AGCAGCGTGGCCCTGGCCCCACACTCCCAAATCTGC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGCTCCTGCCTCCTTTTaGCAGCCAAGGCTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVAPASF*QPRLAR
Trigger: CCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAGTGGGAATAAGGCTTaGTGTGTTGAGAACTGCTCC +
Preference number: 2 (lower is better)
Translates to: TNIPVESPGGQRQALLLSSGNKA*CVENCS
Trigger: GGAGCAGTTCTCAACACACCAAGCCTTATTCCCACT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCAGTGGGAATAAGGCTTaGTGTGTTGAGAACTGCTCC +
Preference number: 2 (lower is better)
Translates to: GARATLLMLIHHQYKQWPSGNKA*CVENCS
Trigger: GGAGCAGTTCTCAACACACCAAGCCTTATTCCCACT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCTGAGAGAGCAGGGCTaGCACAGAGCCCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: SHPSYMKPVRANATCMVNLREQG*HRAPAL
Trigger: CAGGGCAGGGGCTCTGTGCCAGCCCTGCTCTCTCAG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCACAGAGCCCCTGCCCTaGACGAATATCCCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVTEPLP*TNIPVE
Trigger: CTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTGTAAAGATGCTATTTaGCTCAGCAGCAACCCAAGG +
Preference number: 2 (lower is better)
Translates to: TNIPVESPGGQRQALLLSCKDAI*LSSNPR
Trigger: CCTTGGGTTGCTGCTGAGCCAAATAGCATCTTTACA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGCACGAATATCCCTGTaGAGTCCCCGGGAGGACAGA +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVARISL*SPREDR
Trigger: TCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCTGAGAGAGCAGGGCTaGCACAGAGCCCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: ENKTFQGWATHSINIHWTLREQG*HRAPAL
Trigger: CAGGGCAGGGGCTCTGTGCCAGCCCTGCTCTCTCAG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGCAGATTTGGGAGTGTaGGGCCAGGGCCACGCTGCT +
Preference number: 2 (lower is better)
Translates to: SHPSYMKPVRANATCMVNADLGV*GQGHAA
Trigger: AGCAGCGTGGCCCTGGCCCCACACTCCCAAATCTGC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGCTCCTGCCTCCTTTTaGCAGCCAAGGCTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: SHPSYMKPVRANATCMVNAPASF*QPRLAR
Trigger: CCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCTGGCACAGAGCCCCTaGCCTGCACGAATATCCCTG +
Preference number: 2 (lower is better)
Translates to: LGSHPSYMKPVRANATCMLAQSP*PARISL
Trigger: CAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCTGGCACAGAGCCCCTaGCCTGCACGAATATCCCTG +
Preference number: 2 (lower is better)
Translates to: SHPSYMKPVRANATCMVNLAQSP*PARISL
Trigger: CAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGGTTGTTTGGAAATCTaGCAAAGAGCAAGTCTACTT +
Preference number: 2 (lower is better)
Translates to: TNIPVESPGGQRQALLLSGCLEI*QRASLL
Trigger: AAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGACAGAGCCCCTGCCCTaGACGAATATCCCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: LGSHPSYMKPVRANATCMTEPLP*TNIPVE
Trigger: CTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTCATCTGTGGGGGAATaGATACACAATGAGGTTTTA +
Preference number: 2 (lower is better)
Translates to: TNIPVESPGGQRQALLLSSSVGE*IHNEVL
Trigger: TAAAACCTCATTGTGTATCCATTCCCCCACAGATGA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTTCTTAGTTCATCTGTaGGGGAATGGATACACAATG +
Preference number: 2 (lower is better)
Translates to: TNIPVESPGGQRQALLLSFLVHL*GNGYTM
Trigger: CATTGTGTATCCATTCCCCCACAGATGAACTAAGAA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTCTGCAGAGTGGCTGTaGCATCTGAGAGAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: LGSHPSYMKPVRANATCMSAEWL*HLREQG
Trigger: GCCCTGCTCTCTCAGATGCCACAGCCACTCTGCAGA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTATGGAGTGGCAGATTTaGGAGTGTGGGGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: ENKTFQGWATHSINIHWTMEWQI*ECGARA
Trigger: GGCCCTGGCCCCACACTCCCAAATCTGCCACTCCAT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAGTGGGTCTATGGAGTaGCAGATTTGGGAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVSGSME*QIWECG
Trigger: CCCACACTCCCAAATCTGCCACTCCATAGACCCACT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGACAGAGGCAAGCCCTaGTTCTTAGCAACTTTCCAC +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYDRGKP*FLATFH
Trigger: GTGGAAAGTTGCTAAGAAGCAGGGCTTGCCTCTGTC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTCTGCAGAGTGGCTGTaGCATCTGAGAGAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: ENKTFQGWATHSINIHWTSAEWL*HLREQG
Trigger: GCCCTGCTCTCTCAGATGCCACAGCCACTCTGCAGA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTATGGAGTGGCAGATTTaGGAGTGTGGGGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTMEWQI*ECGARA
Trigger: GGCCCTGGCCCCACACTCCCAAATCTGCCACTCCAT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAGGCAAGTGGGTCTATaGAGTGGCAGATTTGGGAGT +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYRQVGL*SGRFGS
Trigger: ACTCCCAAATCTGCCACTCCATAGACCCACTTGCCT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAGGCAAGTGGGTCTATaGAGTGGCAGATTTGGGAGT +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVRQVGL*SGRFGS
Trigger: ACTCCCAAATCTGCCACTCCATAGACCCACTTGCCT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CAA 90 bp AGTGGGAATAAGGCTTGGTGTGTTGAGAACTGCTCCTGCCTCCTTTaGACAGCCAAGGCTGGCAAGGTTGTTTGGAAATCTGACAAAGAG +
Preference number: 2 (lower is better)
Translates to: SGNKAWCVENCSCLL*TAKAGKVVWKSDKE
Trigger: CTCTTTGTCAGATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTATTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGTCACCCTTCTTACATaGAGCCAGTTAGGGCTAATG +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYVTLLT*SQLGLM
Trigger: CATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGAC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTGGTGTGTTGAGAACTaGTCCTGCCTCCTTTTGACA +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYWCVEN*SCLLLT
Trigger: TGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGCACGAATATCCCTGTaGAGTCCCCGGGAGGACAGA +
Preference number: 2 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTARISL*SPREDR
Trigger: TCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGAGTGGGTCTATGGAGTaGCAGATTTGGGAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LGSHPSYMKPVRANATCMSGSME*QIWECG
Trigger: CCCACACTCCCAAATCTGCCACTCCATAGACCCACT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACATCCTCTCTGTGGCTTaGCCTCTGGTATCTACGTAT +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYILSVA*PLVSTY
Trigger: ATACGTAGATACCAGAGGCCAAGCCACAGAGAGGAT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCCAAATATAAAGCCTTaGGGCAAGTGGGTCTATGGA +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVPNIKP*GKWVYG
Trigger: TCCATAGACCCACTTGCCTCAAGGCTTTATATTTGG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCATCAGTACAAACAGTaGCCCAGTTTTGACTTCCTC +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYHQYKQ*PSFDFL
Trigger: GAGGAAGTCAAAACTGGGCCACTGTTTGTACTGATG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAAGACATTTCAGGGATaGGCAACCCACTCCATTAAC +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYKTFQG*ATHSIN
Trigger: GTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGTTGAGAACTGCTCCTaGCTCCTTTTGACAGCCAAG +
Preference number: 2 (lower is better)
Translates to: ENKTFQGWATHSINIHWTVENCS*LLLTAK
Trigger: CTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAAC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGCTGGCAAGGTTGTTTaGAAATCTGACAAAGAGCAA +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVAGKVV*KSDKEQ
Trigger: TTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAGTGGGAATAAGGCTTaGTGTGTTGAGAACTGCTCC +
Preference number: 2 (lower is better)
Translates to: SHPSYMKPVRANATCMVNSGNKA*CVENCS
Trigger: GGAGCAGTTCTCAACACACCAAGCCTTATTCCCACT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAGGCAAGTGGGTCTATaGAGTGGCAGATTTGGGAGT +
Preference number: 2 (lower is better)
Translates to: ENKTFQGWATHSINIHWTRQVGL*SGRFGS
Trigger: ACTCCCAAATCTGCCACTCCATAGACCCACTTGCCT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGGTTGTTTGGAAATCTaGCAAAGAGCAAGTCTACTT +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYGCLEI*QRASLL
Trigger: AAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCCAAATATAAAGCCTTaGGGCAAGTGGGTCTATGGA +
Preference number: 2 (lower is better)
Translates to: LGSHPSYMKPVRANATCMPNIKP*GKWVYG
Trigger: TCCATAGACCCACTTGCCTCAAGGCTTTATATTTGG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGTTGAGAACTGCTCCTaGCTCCTTTTGACAGCCAAG +
Preference number: 2 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTVENCS*LLLTAK
Trigger: CTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAAC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGACAGAGGCAAGCCCTaGTTCTTAGCAACTTTCCAC +
Preference number: 2 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTDRGKP*FLATFH
Trigger: GTGGAAAGTTGCTAAGAAGCAGGGCTTGCCTCTGTC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTTCTTAGTTCATCTGTaGGGGAATGGATACACAATG +
Preference number: 2 (lower is better)
Translates to: GSHPSYMKPVRANATCMVFLVHL*GNGYTM
Trigger: CATTGTGTATCCATTCCCCCACAGATGAACTAAGAA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTTTGACAGCCAAGGCTaGCAAGGTTGTTTGGAAATC +
Preference number: 2 (lower is better)
Translates to: LGSHPSYMKPVRANATCMFDSQG*QGCLEI
Trigger: GATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTGTAAAGATGCTATTTaGCTCAGCAGCAACCCAAGG +
Preference number: 2 (lower is better)
Translates to: LGSHPSYMKPVRANATCMCKDAI*LSSNPR
Trigger: CCTTGGGTTGCTGCTGAGCCAAATAGCATCTTTACA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAGGCAAGTGGGTCTATaGAGTGGCAGATTTGGGAGT +
Preference number: 2 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTRQVGL*SGRFGS
Trigger: ACTCCCAAATCTGCCACTCCATAGACCCACTTGCCT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCTGTGGCTTGGCCTCTaGTATCTACGTATATTAATT +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYLWLGL*YLRILI
Trigger: AATTAATATACGTAGATACCAGAGGCCAAGCCACAG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGCTGGCAAGGTTGTTTaGAAATCTGACAAAGAGCAA +
Preference number: 2 (lower is better)
Translates to: LGSHPSYMKPVRANATCMAGKVV*KSDKEQ
Trigger: TTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTCCATTAACATCCACTaGACTCAATTTCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYSINIH*TQFPKK
Trigger: TTTCTTGGGAAATTGAGTCCAGTGGATGTTAATGGA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTCATCTGTGGGGGAATaGATACACAATGAGGTTTTA +
Preference number: 2 (lower is better)
Translates to: SHPSYMKPVRANATCMVNSSVGE*IHNEVL
Trigger: TAAAACCTCATTGTGTATCCATTCCCCCACAGATGA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTTTGACAGCCAAGGCTaGCAAGGTTGTTTGGAAATC +
Preference number: 2 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTFDSQG*QGCLEI
Trigger: GATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGTAAAGATGCTATTTaGCTCAGCAGCAACCCAAGG +
Preference number: 2 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTCKDAI*LSSNPR
Trigger: CCTTGGGTTGCTGCTGAGCCAAATAGCATCTTTACA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGGTTGTTTGGAAATCTaGCAAAGAGCAAGTCTACTT +
Preference number: 2 (lower is better)
Translates to: ENKTFQGWATHSINIHWTGCLEI*QRASLL
Trigger: AAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGCTTCAACTGATAATTaGTGGTTCAGCTTACAAGGA +
Preference number: 2 (lower is better)
Translates to: ENKTFQGWATHSINIHWTASTDN*WFSLQG
Trigger: TCCTTGTAAGCTGAACCATCAATTATCAGTTGAAGC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTCATCTGTGGGGGAATaGATACACAATGAGGTTTTA +
Preference number: 2 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTSSVGE*IHNEVL
Trigger: TAAAACCTCATTGTGTATCCATTCCCCCACAGATGA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CCA 72 bp CTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTaGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: LAQSPCPARISL*SPREDRGKPCF
Trigger: GAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CCA 72 bp TCTGCAGAGTGGCTGTGGCATCTGAGAGAGCAGGGCTaGCACAGAGCCCCTGCCCTGCACGAATATCCCTGT +
Preference number: 3 (lower is better)
Translates to: SAEWLWHLREQG*HRAPALHEYPC
Trigger: ACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCCCTGCTCTCTCAGATGCCACAGCCACTCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGATAAGGCTTGGTGTGTaGAGAACTGCTCCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: LPCTNIPVESPGGQRQALIRLGV*RTAPAS
Trigger: GGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTAT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCATAAGGCTTGGTGTGTaGAGAACTGCTCCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: TNIPVESPGGQRQALLLSIRLGV*RTAPAS
Trigger: GGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTAT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR GCA 72 bp CAAGGGAGTGGGAATAAGGCTTGGTGTGTTGAGAACTaGTCCTGCCTCCTTTTGACAGCCAAGGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: QGSGNKAWCVEN*SCLLLTAKAGK
Trigger: CTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTATTCCCACTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTATGGAGTGGCAGATTaGGGAGTGTGGGGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: SHPSYMKPVRANATCMVNYGVAD*GVWGQG
Trigger: GCCCTGGCCCCACACTCCCAAATCTGCCACTCCATA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTGCTCCTGCCTCCTTTaGACAGCCAAGGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: LGSHPSYMKPVRANATCMCSCLL*TAKAGK
Trigger: CTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCATAAGGCTTGGTGTGTaGAGAACTGCTCCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: GSHPSYMKPVRANATCMVIRLGV*RTAPAS
Trigger: GGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTAT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAGTGGCCCAGTTTaGACTTCCTCCAGCTCCAAG +
Preference number: 3 (lower is better)
Translates to: GSHPSYMKPVRANATCMVNSGPV*TSSSSK
Trigger: CTTGGAGCTGGAGGAAGTCAAAACTGGGCCACTGTT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTATGGAGTGGCAGATTaGGGAGTGTGGGGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: ENKTFQGWATHSINIHWTYGVAD*GVWGQG
Trigger: GCCCTGGCCCCACACTCCCAAATCTGCCACTCCATA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR GCA 72 bp AGTGGGAATAAGGCTTGGTGTGTTGAGAACTGCTCCTaGCTCCTTTTGACAGCCAAGGCTGGCAAGGTTGTT +
Preference number: 3 (lower is better)
Translates to: SGNKAWCVENCS*LLLTAKAGKVV
Trigger: AACAACCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTATTCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACATAAGGCTTGGTGTGTaGAGAACTGCTCCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: SHPSYMKPVRANATCMVNIRLGV*RTAPAS
Trigger: GGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTAT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGCCAAATATAAAGCCTaGAGGCAAGTGGGTCTATGG +
Preference number: 3 (lower is better)
Translates to: GSHPSYMKPVRANATCMVAKYKA*RQVGLW
Trigger: CCATAGACCCACTTGCCTCAAGGCTTTATATTTGGC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CCA 72 bp CCAGGCCAGGCACTTGAAAATAAGACATTTCAGGGATaGGCAACCCACTCCATTAACATCCACTGGACTCAA +
Preference number: 3 (lower is better)
Translates to: PGQALENKTFQG*ATHSINIHWTQ
Trigger: TTGAGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTCAAGTGCCTGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAACAGTGGCCCAGTTTaGACTTCCTCCAGCTCCAAG +
Preference number: 3 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTNSGPV*TSSSSK
Trigger: CTTGGAGCTGGAGGAAGTCAAAACTGGGCCACTGTT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAACAGCTTAAGACACTaGGTGACTTTCTTAGTTCAT +
Preference number: 3 (lower is better)
Translates to: SHPSYMKPVRANATCMVNNSLRH*VTFLVH
Trigger: ATGAACTAAGAAAGTCACCAAGTGTCTTAAGCTGTT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAACAGCTTAAGACACTaGGTGACTTTCTTAGTTCAT +
Preference number: 3 (lower is better)
Translates to: ENKTFQGWATHSINIHWTNSLRH*VTFLVH
Trigger: ATGAACTAAGAAAGTCACCAAGTGTCTTAAGCTGTT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAACAGCTTAAGACACTaGGTGACTTTCTTAGTTCAT +
Preference number: 3 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTNSLRH*VTFLVH
Trigger: ATGAACTAAGAAAGTCACCAAGTGTCTTAAGCTGTT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAAACAGCTTAAGACACTaGGTGACTTTCTTAGTTCAT +
Preference number: 3 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQANSLRH*VTFLVH
Trigger: ATGAACTAAGAAAGTCACCAAGTGTCTTAAGCTGTT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CCA 72 bp TCTTCAACTTATTCACATATGAACAGAGATACTATCTaGATCTTTAGGTCTGAAATATTCACCACGAGTGAA +
Preference number: 3 (lower is better)
Translates to: SSTYSHMNRDTI*IFRSEIFTTSE
Trigger: TTCACTCGTGGTGAATATTTCAGACCTAAAGATCCAGATAGTATCTCTGTTCATATGTGAATAAGTTGAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGGAGGAAGCGCACGGCTaGGGGCCGCCTGGTTGCATC +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGREEAHG*GPPGCI
Trigger: GATGCAACCAGGCGGCCCTCAGCCGTGCGCTTCCTC...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGAGCCCCGCCGGGCCTaGTGCAGCCGCAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPEPRRA*CSRSTG
Trigger: CCCAGTACTGCGGCTGCAGCAGGCCCGGCGGGGCTC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTTCCCACAGCTAGCATaGTCACCAGGGCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRFPQLA*SPGRWR
Trigger: CCTCCAGCGCCCTGGTGAGCATGCTAGCTGTGGGAA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTGTGGAGTCTCCCCTTaGTCCAGGAGGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRCGVSP*SRRFSA
Trigger: GGCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCTGGCACAGAGCCCCTaGCCTGCACGAATATCCCTG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRLAQSP*PARISL
Trigger: CAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGTGTCACAAGTCGTCTaGGGTCGGCGGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALVSQVV*GRRTRA
Trigger: CGCCCTGGTCCGCCGACCGCAGACGACTTGTGACAC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCAGGAGCTCAGAGGATaGGCGGGCCATGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRQELRG*AGHGQY
Trigger: ATACTGGCCATGGCCCGCCCATCCTCTGAGCTCCTG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTGAGAGAGCAGGGCTaGCACAGAGCCCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALLREQG*HRAPAL
Trigger: CAGGGCAGGGGCTCTGTGCCAGCCCTGCTCTCTCAG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCCGCAGTACTGGGTCTaGGGTGGAGTGCCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSPQYWV*GGVPAA
Trigger: GGCCGCCGGCACTCCACCTCAGACCCAGTACTGCGG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTTAATGGCTTGCTCCTaGTCACTCCAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRLMACS*SLQRAG
Trigger: CCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACCCCCTTAATGGCTTaGTCCTGCTCACTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRTPLMA*SCSLQR
Trigger: CCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGGGT...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGCCCCTGCCCTaGACGAATATCCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRTEPLP*TNIPVE
Trigger: CTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGT...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGAGGACAGCAGCTTCGTaGCAGAGCCGGAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALRTAAS*QSRSPS
Trigger: GCTTGGGCTCCGGCTCTGCCACGAAGCTGCTGTCCT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGGCACGAATATCCCTGTaGAGTCCCCGGGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRARISL*SPREDR
Trigger: TCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGC...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGCAGATTTGGGAGTGTaGGGCCAGGGCCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALADLGV*GQGHAA
Trigger: AGCAGCGTGGCCCTGGCCCCACACTCCCAAATCTGC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGGTGTCCTGCTGTTCTaGCTGACAGAGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALGVLLF*LTEPGL
Trigger: GAGCCCTGGCTCTGTCAGGCAGAACAGCAGGACACC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCAGGAGCTCAGAGGATaGGCGGGCCATGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALQELRG*AGHGQY
Trigger: ATACTGGCCATGGCCCGCCCATCCTCTGAGCTCCTG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGGGTCTGAGGTGGAGTaGCGGCGGCCCTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSGSEVE*RRPWRK
Trigger: CTTTCTCCAGGGCCGCCGGCACTCCACCTCAGACCC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCTGGGTTCTCATACTTaGAAGCTCTACCGCCACACG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRLGSHT*KLYRHT
Trigger: CGTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGACCCCCTTAATGGCTTaGTCCTGCTCACTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALTPLMA*SCSLQR
Trigger: CCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGGGT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGAAAATCTGCTGCCACTaGAGTGGGGTTAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRKICCH*SGVRRV
Trigger: AACCCGCCTAACCCCACTGCAGTGGCAGCAGATTTT...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGGCTCCTTCAGTTaGTCCACCCAAGACCACATC +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRTGSFS*STQDHI
Trigger: GATGTGGTCTTGGGTGGAGCAACTGAAGGAGCCTGT...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTGCTTCTGCGGCATCTaGTCGCCTGTCAACCAACAT +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRCFCGI*SPVNQH
Trigger: ATGTTGGTTGACAGGCGAGCAGATGCCGCAGAAGCA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTCTGCATGGCTGACTaGGGAAACAGCCACCATCAC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALLCMAD*GNSHHH
Trigger: GTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR TCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTCAAGCTGCATAGGATaGAAGGGTCCCTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALSSCIG*KGPSRH
Trigger: GTGGCGAGAGGGACCCTTTCATCCTATGCAGCTTGA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTGGCTTATGAGCTTCTaGTGCCTGGGCTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALWLMSF*CLGLWP
Trigger: TGGCCACAAGCCCAGGCAGCAGAAGCTCATAAGCCA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGGTTGAGAACTGCTCCTaGCTCCTTTTGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRVENCS*LLLTAK
Trigger: CTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAAC...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTGGCCAACCAAGATCTaGGCAGGCACTGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALWPTKI*AGTVCG
Trigger: TCCACAGACAGTGCCTGCCCAGATCTTGGTTGGCCA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTATCCAGCTGCATGGTaGCCATCTCAGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRYPAAW*PSQTLS
Trigger: AGACAATGTCTGAGATGGTCACCATGCAGCTGGATA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGGAGTCTTGCTTCCCCTaGAATTCCGTCTTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRESCFP*NSVFKQ
Trigger: CTGCTTAAAGACGGAATTTCAGGGGAAGCAAGACTC...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTGGGTTCTCATACTTaGAAGCTCTACCGCCACACG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALLGSHT*KLYRHT
Trigger: CGTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTTCCCACAGCTAGCATaGTCACCAGGGCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPFPQLA*SPGRWR
Trigger: CCTCCAGCGCCCTGGTGAGCATGCTAGCTGTGGGAA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGGAGAAAGCTCCACTCTaGTGTGCTTCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGREKAPL*CASFGM
Trigger: CATTCCAAAGGAAGCACAGCAGAGTGGAGCTTTCTC...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGGTGTCCTGCTGTTCTaGCTGACAGAGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPGVLLF*LTEPGL
Trigger: GAGCCCTGGCTCTGTCAGGCAGAACAGCAGGACACC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGGTGTCCTGCTGTTCTaGCTGACAGAGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSGVLLF*LTEPGL
Trigger: GAGCCCTGGCTCTGTCAGGCAGAACAGCAGGACACC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTTCAACCAAGAACTGTaGTTTGGGACTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRFNQEL*FGTGAT
Trigger: TGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTGCTTCTGCGGCATCTaGTCGCCTGTCAACCAACAT +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALCFCGI*SPVNQH
Trigger: ATGTTGGTTGACAGGCGAGCAGATGCCGCAGAAGCA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTCTGCAGGTTCACTATaGAGTGCAACACGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRSAGSL*SATRRE
Trigger: TTCTCTGCGTGTTGCACTGCATAGTGAACCTGCAGA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGAGTGGGTCTATGGAGTaGCAGATTTGGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALSGSME*QIWECG
Trigger: CCCACACTCCCAAATCTGCCACTCCATAGACCCACT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCCTCCAAACTTTGACTaGCTCCAGAAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRPPNFD*LQKESV
Trigger: CACACTTTCTTTCTGGAGTCAGTCAAAGTTTGGAGG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGACACGCCATGGAACATaGCATGTGTCCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALTRHGT*HVSRND
Trigger: GTCATTCCTGGACACATGGCATGTTCCATGGCGTGT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGGGAATTGGGTCGCTTTaGCCGCACAAATATAATTGC +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRGIGSL*PHKYNC
Trigger: GCAATTATATTTGTGCGGGCAAAGCGACCCAATTCC...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGGTGTTTCAGAAGTCGTaGCTCATAACCATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRVFQKS*LITMKQ
Trigger: CTGCTTCATGGTTATGAGGCACGACTTCTGAAACAC...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCACAGCCACCATCACCTaGAGAGAGGACGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSTATIT*REDEDS
Trigger: GCTGTCCTCGTCCTCTCTCCAGGTGATGGTGGCTGT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCACTGTGCTTTGGGACTaGAGCCACAGTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSTVLWD*SHSPEG
Trigger: GCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTCTGCAGAGTGGCTGTaGCATCTGAGAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPSAEWL*HLREQG
Trigger: GCCCTGCTCTCTCAGATGCCACAGCCACTCTGCAGA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCATCAGTACAAACAGTaGCCCAGTTTTGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRHQYKQ*PSFDFL
Trigger: GAGGAAGTCAAAACTGGGCCACTGTTTGTACTGATG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCCATGGCTGAGGAACTaGTCAATGATGTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALPWLRN*SMMWYF
Trigger: GAAGTACCACATCATTGATCAGTTCCTCAGCCATGG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTGGCGAATTAGATATTaGGGTAAGGTGACAGCATGT +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRWRIRY*GKVTAC
Trigger: ACATGCTGTCACCTTACCTCAATATCTAATTCGCCA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTCCATGGAAAATTGGTaGCCCATTATCTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRSMENW*PIIFES
Trigger: GGACTCAAAGATAATGGGTCACCAATTTTCCATGGA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGAATATTCACCACGAGTaGAAGCTAGAGGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALNIHHE*KLEARL
Trigger: AAGCCTGGCCTCTAGCTTTCACTCGTGGTGAATATT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGAGCCCCGCCGGGCCTaGTGCAGCCGCAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNEPRRA*CSRSTG
Trigger: CCCAGTACTGCGGCTGCAGCAGGCCCGGCGGGGCTC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGATTGTCAAAATCTGCTaGCACTGCAGTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALIVKIC*HCSGVR
Trigger: CCTAACCCCACTGCAGTGGCAGCAGATTTTGACAAT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTCGATTGTCAAAATCTaGTGCCACTGCAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALSIVKI*CHCSGV
Trigger: AACCCCACTGCAGTGGCAGCAGATTTTGACAATCGA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTGGCTTATGAGCTTCTaGTGCCTGGGCTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPWLMSF*CLGLWP
Trigger: TGGCCACAAGCCCAGGCAGCAGAAGCTCATAAGCCA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGGGTTTCCCTCTGCATaGCTGACTGAGGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSGFPSA*LTEETA
Trigger: GGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTACCGCCACACGCCATaGAACATGCCATGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSYRHTP*NMPCVQ
Trigger: CTGGACACATGGCATGTTCCATGGCGTGTGGCGGTA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCTCACTCCAGCGGGCTaGGTTCTCATACTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSLTPAG*VLILAS
Trigger: GCTTGCAAGTATGAGAACCCAGCCCGCTGGAGTGAG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGAGAGGAGCTGTCCTCTaGTTTGTATGGAATTGGGTC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALRGAVL*FVWNWV
Trigger: GACCCAATTCCATACAAACCAGAGGACAGCTCCTCT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTGGCCAACCAAGATCTaGGCAGGCACTGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPWPTKI*AGTVCG
Trigger: TCCACAGACAGTGCCTGCCCAGATCTTGGTTGGCCA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTGGTGAGCAGGGTTTaGATCCTTATGGACATTTGC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALLVSRV*ILMDIC
Trigger: GCAAATGTCCATAAGGATCCAAACCCTGCTCACCAG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCGCCGGACAACGTCCTaGGGCGAGCGCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMRRTTS*GERLGC
Trigger: GCAGCCCAGGCGCTCGCCCCAGGACGTTGTCCGGCG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCCCGCGGAGGGTCTGTaGGTAGCGGGCCCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMPAEGL*VAGPRA
Trigger: TGCCCTCGGGCCCGCTACCCACAGACCCTCCGCGGG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCCGCAGTACTGGGTCTaGGGTGGAGTGCCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMPQYWV*GGVPAA
Trigger: GGCCGCCGGCACTCCACCTCAGACCCAGTACTGCGG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR TCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGATATTGAGGTAAGGTaGCAGCATGTGCTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALDIEVR*QHVLWD
Trigger: ATCCCAAAGCACATGCTGTCACCTTACCTCAATATC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCTGAGTCACTGTAGCTaGGCCGCCTTTTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPLSHCS*AAFSDE
Trigger: CTCATCTGAAAAGGCGGCTCAGCTACAGTGACTCAG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCTGGGTTCTCATACTTaGAAGCTCTACCGCCACACG +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSLGSHT*KLYRHT
Trigger: CGTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGTGTTTCAGAAGTCGTaGCTCATAACCATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALVFQKS*LITMKQ
Trigger: CTGCTTCATGGTTATGAGGCACGACTTCTGAAACAC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGAGAGGGTCAAACTGTTaGTCATTGGAGAAAATCATG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRRGSNC*SLEKIM
Trigger: CATGATTTTCTCCAATGAGCAACAGTTTGACCCTCT...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCACAGGCTCCTTCAGTTaGTCCACCCAAGACCACATC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSTGSFS*STQDHI
Trigger: GATGTGGTCTTGGGTGGAGCAACTGAAGGAGCCTGT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGGCACCGATCCCTGCTaGTCCCGACGCGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNGTDPC*SRRALE
Trigger: CTCCAGGGCGCGTCGGGAGCAGCAGGGATCGGTGCC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGCACCTGCATGGCACTaGGAGGCAAGAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVAPAWH*EARAGG
Trigger: GCCTCCGGCTCTTGCCTCCCAGTGCCATGCAGGTGC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGTACTGGGTCTGAGGTaGAGTGCCGGCGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYVLGLR*SAGGPG
Trigger: TCCAGGGCCGCCGGCACTCCACCTCAGACCCAGTAC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCAAACTGTTGCTCATTaGAGAAAATCATGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRQTVAH*RKSCLD
Trigger: ATCGAGGCATGATTTTCTCCAATGAGCAACAGTTTG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGAATTTGCTAGGGCTTTaGCCGCCAGTATTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALNLLGL*PPVFFL
Trigger: CAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGTTCTTAGTTCATCTGTaGGGGAATGGATACACAATG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRFLVHL*GNGYTM
Trigger: CATTGTGTATCCATTCCCCCACAGATGAACTAAGAA...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCTGAGAGAGCAGGGCTaGCACAGAGCCCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYLREQG*HRAPAL
Trigger: CAGGGCAGGGGCTCTGTGCCAGCCCTGCTCTCTCAG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCTGAGAGAGCAGGGCTaGCACAGAGCCCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVLREQG*HRAPAL
Trigger: CAGGGCAGGGGCTCTGTGCCAGCCCTGCTCTCTCAG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCAGTGGGTCTATGGAGTaGCAGATTTGGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPSGSME*QIWECG
Trigger: CCCACACTCCCAAATCTGCCACTCCATAGACCCACT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCTGTGGCTTGGCCTCTaGTATCTACGTATATTAATT +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRLWLGL*YLRILI
Trigger: AATTAATATACGTAGATACCAGAGGCCAAGCCACAG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGAAGACATTTCAGGGATaGGCAACCCACTCCATTAAC +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALKTFQG*ATHSIN
Trigger: GTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGCTCCCGACGCGCCCTaGAGGCAGAGGGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTAPDAP*RQRGPS
Trigger: GCTGGGACCCCTCTGCCTCCAGGGCGCGTCGGGAGC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGAGGAAGCGCACGGCTaGGGGCCGCCTGGTTGCATC +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMEEAHG*GPPGCI
Trigger: GATGCAACCAGGCGGCCCTCAGCCGTGCGCTTCCTC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR TCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTATGGTTGTTCATTCTaGGGCAAGACTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPYGCSF*GKTPAA
Trigger: GGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTGTCCAGGAATGACATaGCGTAAACGCTCCCCTACT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSCPGMT*RKRSPT
Trigger: AGTAGGGGAGCGTTTACGGCATGTCATTCCTGGACA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTGTCCAGGAATGACATaGCGTAAACGCTCCCCTACT +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPCPGMT*RKRSPT
Trigger: AGTAGGGGAGCGTTTACGGCATGTCATTCCTGGACA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCACACGCCATGGAACATaGCATGTGTCCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPTRHGT*HVSRND
Trigger: GTCATTCCTGGACACATGGCATGTTCCATGGCGTGT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCATTGGAGAAAATCATaGCTCGATTGTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRHWRKS*LDCQNL
Trigger: CAGATTTTGACAATCGAGGCATGATTTTCTCCAATG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTCCACGGGAATTGTCTaGAGGTTCACTATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSSTGIV*RFTMQC
Trigger: GCACTGCATAGTGAACCTGCAGACAATTCCCGTGGA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCGCGGCACCGATCCCTaGTGCTCCCGACGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTRGTDP*CSRRAL
Trigger: CAGGGCGCGTCGGGAGCAGCAGGGATCGGTGCCGCG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGTCCTCTGGTTTGTATaGAATTGGGTCGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPVLWFV*NWVALP
Trigger: GGGCAAAGCGACCCAATTCCATACAAACCAGAGGAC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAGGCAAGTGGGTCTATaGAGTGGCAGATTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSRQVGL*SGRFGS
Trigger: ACTCCCAAATCTGCCACTCCATAGACCCACTTGCCT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCCATGGCTGAGGAACTaGTCAATGATGTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPPWLRN*SMMWYF
Trigger: GAAGTACCACATCATTGATCAGTTCCTCAGCCATGG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCGACCAAGCCCTGCATaGCAATGGATAGCTACTTTT +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPRPSPA*QWIATF
Trigger: AAAAGTAGCTATCCATTGTCATGCAGGGCTTGGTCG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTATCCAGCTGCATGGTaGCCATCTCAGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSYPAAW*PSQTLS
Trigger: AGACAATGTCTGAGATGGTCACCATGCAGCTGGATA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGTCACCCTTCTTACATaGAGCCAGTTAGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSVTLLT*SQLGLM
Trigger: CATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGAC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGAGTCTTGCTTCCCCTaGAATTCCGTCTTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPESCFP*NSVFKQ
Trigger: CTGCTTAAAGACGGAATTTCAGGGGAAGCAAGACTC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCGCCTGGTTGCATCCTaGACCTGCATGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYRLVAS*TCMALG
Trigger: TCCCAGTGCCATGCAGGTGCAGGATGCAACCAGGCG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACCCCGCCGGGCCTGCTaGAGCCGCAGTACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAPRRAC*SRSTGS
Trigger: AGACCCAGTACTGCGGCTGCAGCAGGCCCGGCGGGG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTGTTCGACCAAGCCCTaGATGACAATGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPCSTKP*MTMDSY
Trigger: GTAGCTATCCATTGTCATGCAGGGCTTGGTCGAACA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTCCAGAAAGAAAGTGTaGTGCGAACCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSSRKKV*CEPRLP
Trigger: AGGAAGCCTTGGTTCGCAGCACACTTTCTTTCTGGA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCAGCTCCACTCTGCTGTaGTTCCTTTGGAATGATCCT +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPSSTLL*FLWNDP
Trigger: AGGATCATTCCAAAGGAAGCACAGCAGAGTGGAGCT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTCTGCAGGTTCACTATaGAGTGCAACACGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSSAGSL*SATRRE
Trigger: TTCTCTGCGTGTTGCACTGCATAGTGAACCTGCAGA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTCTGCAGGTTCACTATaGAGTGCAACACGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPSAGSL*SATRRE
Trigger: TTCTCTGCGTGTTGCACTGCATAGTGAACCTGCAGA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTGGTGTGTTGAGAACTaGTCCTGCCTCCTTTTGACA +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPWCVEN*SCLLLT
Trigger: TGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGTGTCACAAGTCGTCTaGGGTCGGCGGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNVSQVV*GRRTRA
Trigger: CGCCCTGGTCCGCCGACCGCAGACGACTTGTGACAC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCTGGTGAGCAGGGTTTaGATCCTTATGGACATTTGC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSLVSRV*ILMDIC
Trigger: GCAAATGTCCATAAGGATCCAAACCCTGCTCACCAG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTTCTTAGTTCATCTGTaGGGGAATGGATACACAATG +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALFLVHL*GNGYTM
Trigger: CATTGTGTATCCATTCCCCCACAGATGAACTAAGAA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACATGGAGTGGCAGATTTaGGAGTGTGGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYMEWQI*ECGARA
Trigger: GGCCCTGGCCCCACACTCCCAAATCTGCCACTCCAT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCATCCTCTCTGTGGCTTaGCCTCTGGTATCTACGTAT +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPILSVA*PLVSTY
Trigger: ATACGTAGATACCAGAGGCCAAGCCACAGAGAGGAT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCATCCTCTCTGTGGCTTaGCCTCTGGTATCTACGTAT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSILSVA*PLVSTY
Trigger: ATACGTAGATACCAGAGGCCAAGCCACAGAGAGGAT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGATATTGAGGTAAGGTaGCAGCATGTGCTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSDIEVR*QHVLWD
Trigger: ATCCCAAAGCACATGCTGTCACCTTACCTCAATATC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCACCCCCTTAATGGCTTaGTCCTGCTCACTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVTPLMA*SCSLQR
Trigger: CCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGGGT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAGAAAGAAAGTGTGCTaGGAACCAAGGCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSRKKVC*EPRLPC
Trigger: ACAAGGAAGCCTTGGTTCGCAGCACACTTTCTTTCT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCAGGTTCACTATGCAGTaGAACACGCAGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPRFTMQ*NTQRIV
Trigger: GACTATTCTCTGCGTGTTGCACTGCATAGTGAACCT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAGGTTCACTATGCAGTaGAACACGCAGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSRFTMQ*NTQRIV
Trigger: GACTATTCTCTGCGTGTTGCACTGCATAGTGAACCT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTGCTGCCTGGGCTTGTaGCCAACCAAGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYCCLGL*PTKIWA
Trigger: TGCCCAGATCTTGGTTGGCCACAAGCCCAGGCAGCA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACACTGTGCTTTGGGACTaGAGCCACAGTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYTVLWD*SHSPEG
Trigger: GCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGCACGAATATCCCTGTaGAGTCCCCGGGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYARISL*SPREDR
Trigger: TCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGCAGATTTGGGAGTGTaGGGCCAGGGCCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMADLGV*GQGHAA
Trigger: AGCAGCGTGGCCCTGGCCCCACACTCCCAAATCTGC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAAGACATTTCAGGGATaGGCAACCCACTCCATTAAC +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSKTFQG*ATHSIN
Trigger: GTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTTCCCTCTGCATGGCTaGCTGAGGAAACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVFPLHG*LRKQPP
Trigger: TGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCCATGTGTCCAGGAATaGCATGCCGTAAACGCTCCC +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYPCVQE*HAVNAP
Trigger: GGGAGCGTTTACGGCATGTCATTCCTGGACACATGG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTGGCGAATTAGATATTaGGGTAAGGTGACAGCATGT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSWRIRY*GKVTAC
Trigger: ACATGCTGTCACCTTACCTCAATATCTAATTCGCCA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCATTTGCAAAGCTGGGTaGAACTGGCTCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVICKAG*NWLPRA
Trigger: AGCCCTGGGGAGCCAGTTTCACCCAGCTTTGCAAAT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTCAAGCTGCATAGGATaGAAGGGTCCCTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVSSCIG*KGPSRH
Trigger: GTGGCGAGAGGGACCCTTTCATCCTATGCAGCTTGA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGGGTCTGAGGTGGAGTaGCGGCGGCCCTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAGSEVE*RRPWRK
Trigger: CTTTCTCCAGGGCCGCCGGCACTCCACCTCAGACCC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTGTGGAGTCTCCCCTTaGTCCAGGAGGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNCGVSP*SRRFSA
Trigger: GGCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTGGCTTATGAGCTTCTaGTGCCTGGGCTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVWLMSF*CLGLWP
Trigger: TGGCCACAAGCCCAGGCAGCAGAAGCTCATAAGCCA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTTTTTAGTTGTGCCATaGTATGGTCACATCATAACT +
Preference number: 4 (lower is better)
Translates to: LPCTNIPVESPGGQRQALFLVVP*YGHIIT
Trigger: AGTTATGATGTGACCATAGCATGGCACAACTAAAAA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGCACCTGCATGGCACTaGGAGGCAAGAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTAPAWH*EARAGG
Trigger: GCCTCCGGCTCTTGCCTCCCAGTGCCATGCAGGTGC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCATCCTGCACCTGCATaGCACTGGGAGGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNHPAPA*HWEARA
Trigger: GGCTCTTGCCTCCCAGTGCCATGCAGGTGCAGGATG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTGTACTGGGTCTGAGGTaGAGTGCCGGCGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVVLGLR*SAGGPG
Trigger: TCCAGGGCCGCCGGCACTCCACCTCAGACCCAGTAC...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTACCGCCACACGCCATaGAACATGCCATGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYYRHTP*NMPCVQ
Trigger: CTGGACACATGGCATGTTCCATGGCGTGTGGCGGTA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCTCACTCCAGCGGGCTaGGTTCTCATACTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYLTPAG*VLILAS
Trigger: GCTTGCAAGTATGAGAACCCAGCCCGCTGGAGTGAG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTGGCCAACCAAGATCTaGGCAGGCACTGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVWPTKI*AGTVCG
Trigger: TCCACAGACAGTGCCTGCCCAGATCTTGGTTGGCCA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCTGAGAGAGCAGGGCTaGCACAGAGCCCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTLREQG*HRAPAL
Trigger: CAGGGCAGGGGCTCTGTGCCAGCCCTGCTCTCTCAG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGCTCCTGCCTCCTTTTaGCAGCCAAGGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTAPASF*QPRLAR
Trigger: CCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGCTTCAACTGATAATTaGTGGTTCAGCTTACAAGGA +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPASTDN*WFSLQG
Trigger: TCCTTGTAAGCTGAACCATCAATTATCAGTTGAAGC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGCTTCAACTGATAATTaGTGGTTCAGCTTACAAGGA +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSASTDN*WFSLQG
Trigger: TCCTTGTAAGCTGAACCATCAATTATCAGTTGAAGC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCTGGGTTCTCATACTTaGAAGCTCTACCGCCACACG +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYLGSHT*KLYRHT
Trigger: CGTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTTAATGGCTTGCTCCTaGTCACTCCAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNLMACS*SLQRAG
Trigger: CCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTTCCCACAGCTAGCATaGTCACCAGGGCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTFPQLA*SPGRWR
Trigger: CCTCCAGCGCCCTGGTGAGCATGCTAGCTGTGGGAA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAAAATCTGCTGCCACTaGAGTGGGGTTAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVKICCH*SGVRRV
Trigger: AACCCGCCTAACCCCACTGCAGTGGCAGCAGATTTT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTGCTTCTGCGGCATCTaGTCGCCTGTCAACCAACAT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYCFCGI*SPVNQH
Trigger: ATGTTGGTTGACAGGCGAGCAGATGCCGCAGAAGCA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCATTAACCTTAGTGAATaGCTTAATGGCATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSINLSE*LNGMGK
Trigger: CTTGCCCATGCCATTAAGGCATTCACTAAGGTTAAT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCTGAGGCAAGACTCCTaGAGCCATGGTAGTCTGATC +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYLRQDS*SHGSLI
Trigger: GATCAGACTACCATGGCTGCAGGAGTCTTGCCTCAG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGAGTGCCGGCGGCCCTaGAGAAAGGAGCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTECRRP*RKELRK
Trigger: CTTCCTCAGCTCCTTTCTCCAGGGCCGCCGGCACTC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGACAGCCACCATCACCTaGAGAGAGGACGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMTATIT*REDEDS
Trigger: GCTGTCCTCGTCCTCTCTCCAGGTGATGGTGGCTGT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCAGGAGCTCAGAGGATaGGCGGGCCATGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTQELRG*AGHGQY
Trigger: ATACTGGCCATGGCCCGCCCATCCTCTGAGCTCCTG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCAAACTGTTGCTCATTaGAGAAAATCATGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSQTVAH*RKSCLD
Trigger: ATCGAGGCATGATTTTCTCCAATGAGCAACAGTTTG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTGCTGCCTGGGCTTGTaGCCAACCAAGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMCCLGL*PTKIWA
Trigger: TGCCCAGATCTTGGTTGGCCACAAGCCCAGGCAGCA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACACTGTGCTTTGGGACTaGAGCCACAGTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNTVLWD*SHSPEG
Trigger: GCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCAGATCTTTACTGTCCTaGGTTTCATGTTCAACCAAG +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPRSLLS*VSCSTK
Trigger: CTTGGTTGAACATGAAACCCAGGACAGTAAAGATCT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTCATCTGTGGGGGAATaGATACACAATGAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPSSVGE*IHNEVL
Trigger: TAAAACCTCATTGTGTATCCATTCCCCCACAGATGA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCTGTGGCTTGGCCTCTaGTATCTACGTATATTAATT +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPLWLGL*YLRILI
Trigger: AATTAATATACGTAGATACCAGAGGCCAAGCCACAG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCTGTGGCTTGGCCTCTaGTATCTACGTATATTAATT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSLWLGL*YLRILI
Trigger: AATTAATATACGTAGATACCAGAGGCCAAGCCACAG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAGTTGTGCCATGCTATaGTCACATCATAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSSCAML*SHHNCS
Trigger: AGAACAGTTATGATGTGACCATAGCATGGCACAACT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCCATGTGTCCAGGAATaGCATGCCGTAAACGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMPCVQE*HAVNAP
Trigger: GGGAGCGTTTACGGCATGTCATTCCTGGACACATGG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAAATGCCAGCCTCCATaGAAGCCTCAGGAAGGTATG +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVKCQPP*KPQEGM
Trigger: CATACCTTCCTGAGGCTTTCATGGAGGCTGGCATTT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAAATGCCAGCCTCCATaGAAGCCTCAGGAAGGTATG +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYKCQPP*KPQEGM
Trigger: CATACCTTCCTGAGGCTTTCATGGAGGCTGGCATTT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTGTAACAATGGCTTATaGGCTTCTGCTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVCNNGL*ASAAWA
Trigger: AGCCCAGGCAGCAGAAGCTCATAAGCCATTGTTACA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTGTAACAATGGCTTATaGGCTTCTGCTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYCNNGL*ASAAWA
Trigger: AGCCCAGGCAGCAGAAGCTCATAAGCCATTGTTACA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACATTTGCAAAGCTGGGTaGAACTGGCTCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNICKAG*NWLPRA
Trigger: AGCCCTGGGGAGCCAGTTTCACCCAGCTTTGCAAAT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGATTTGCAAAGCTGGGTaGAACTGGCTCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMICKAG*NWLPRA
Trigger: AGCCCTGGGGAGCCAGTTTCACCCAGCTTTGCAAAT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTGCTCCTGCCTCCTTTTaGCAGCCAAGGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVAPASF*QPRLAR
Trigger: CCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGC...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGCTCCTGCCTCCTTTTaGCAGCCAAGGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTAPASF*QPRLAR
Trigger: CCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCGCCTGGTTGCATCCTaGACCTGCATGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTRLVAS*TCMALG
Trigger: TCCCAGTGCCATGCAGGTGCAGGATGCAACCAGGCG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCACACGCCATGGAACATaGCATGTGTCCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVTRHGT*HVSRND
Trigger: GTCATTCCTGGACACATGGCATGTTCCATGGCGTGT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAGCAAGAGAATATATTaGGGAGAGGAGTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSSKRIY*GEELET
Trigger: AGTTTCTAACTCCTCTCCGCAATATATTCTCTTGCT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCATTGGAGAAAATCATaGCTCGATTGTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPHWRKS*LDCQNL
Trigger: CAGATTTTGACAATCGAGGCATGATTTTCTCCAATG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCATTGGAGAAAATCATaGCTCGATTGTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSHWRKS*LDCQNL
Trigger: CAGATTTTGACAATCGAGGCATGATTTTCTCCAATG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTGTGGAGTCTCCCCTTaGTCCAGGAGGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVCGVSP*SRRFSA
Trigger: GGCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGTGGAGTCTCCCCTTaGTCCAGGAGGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTCGVSP*SRRFSA
Trigger: GGCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGAATTAAGCTCTTTCTaGCACATTTCTACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSELSSF*HISTFL
Trigger: AAGGAAGGTAGAAATGTGGCAGAAAGAGCTTAATTC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGTTGAGAACTGCTCCTaGCTCCTTTTGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYVENCS*LLLTAK
Trigger: CTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAAC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTACAGAGCCCCTGCCCTaGACGAATATCCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTTEPLP*TNIPVE
Trigger: CTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACTGGCACAGAGCCCCTaGCCTGCACGAATATCCCTG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQALAQSP*PARISL
Trigger: CAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCTGGCACAGAGCCCCTaGCCTGCACGAATATCCCTG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTLAQSP*PARISL
Trigger: CAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCTGAGGCAAGACTCCTaGAGCCATGGTAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVLRQDS*SHGSLF
Trigger: GAAAAGACTACCATGGCTGCAGGAGTCTTGCCTCAG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACATCCTGCACCTGCATaGCACTGGGAGGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAHPAPA*HWEARA
Trigger: GGCTCTTGCCTCCCAGTGCCATGCAGGTGCAGGATG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTCTTTCGGGGAAAGTTaGGTTTCCCTCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVSFGES*VSLCMA
Trigger: AGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTCTTTCGGGGAAAGTTaGGTTTCCCTCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYSFGES*VSLCMA
Trigger: AGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCTCACTCCAGCGGGCTaGGTTCTCATACTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNLTPAG*VLILAS
Trigger: GCTTGCAAGTATGAGAACCCAGCCCGCTGGAGTGAG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGTCCTCTGGTTTGTATaGAATTGGGTCGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVVLWFV*NWVALP
Trigger: GGGCAAAGCGACCCAATTCCATACAAACCAGAGGAC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTGGCCAACCAAGATCTaGGCAGGCACTGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMWPTKI*AGTVCG
Trigger: TCCACAGACAGTGCCTGCCCAGATCTTGGTTGGCCA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTACTGTGCTTTGGGACTaGAGCCACAGTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTTVLWD*SHSPEG
Trigger: GCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGCACGAATATCCCTGTaGAGTCCCCGGGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTARISL*SPREDR
Trigger: TCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAATGGAGTGGCAGATTTaGGAGTGTGGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAMEWQI*ECGARA
Trigger: GGCCCTGGCCCCACACTCCCAAATCTGCCACTCCAT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTCCATTAACATCCACTaGACTCAATTTCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPSINIH*TQFPKK
Trigger: TTTCTTGGGAAATTGAGTCCAGTGGATGTTAATGGA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
3UTR CAA 72 bp AAGGCTTGGTGTGTTGAGAACTGCTCCTGCCTCCTTTaGACAGCCAAGGCTGGCAAGGTTGTTTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: KAWCVENCSCLL*TAKAGKVVWKS
Trigger: AGATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCAAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCCATGGCTGAGGAACTaGTCAATGATGTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVPWLRN*SMMWYF
Trigger: GAAGTACCACATCATTGATCAGTTCCTCAGCCATGG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCGACCAAGCCCTGCATaGCAATGGATAGCTACTTTT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVRPSPA*QWIATF
Trigger: AAAAGTAGCTATCCATTGTCATGCAGGGCTTGGTCG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTATCCAGCTGCATGGTaGCCATCTCAGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVYPAAW*PSQTLS
Trigger: AGACAATGTCTGAGATGGTCACCATGCAGCTGGATA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCTGAGTCACTGTAGCTaGGCCGCCTTTTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMLSHCS*AAFSDE
Trigger: CTCATCTGAAAAGGCGGCTCAGCTACAGTGACTCAG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCTGAGTCACTGTAGCTaGGCCGCCTTTTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNLSHCS*AAFSDE
Trigger: CTCATCTGAAAAGGCGGCTCAGCTACAGTGACTCAG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAATATTCACCACGAGTaGAAGCTAGAGGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYNIHHE*KLEARL
Trigger: AAGCCTGGCCTCTAGCTTTCACTCGTGGTGAATATT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGTCACCCTTCTTACATaGAGCCAGTTAGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVVTLLT*SQLGLM
Trigger: CATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGAC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTTAATGGCTTGCTCCTaGTCACTCCAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTLMACS*SLQRAG
Trigger: CCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTACCCCCTTAATGGCTTaGTCCTGCTCACTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTTPLMA*SCSLQR
Trigger: CCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGGGT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTGTTCGACCAAGCCCTaGATGACAATGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYCSTKP*MTMDSY
Trigger: GTAGCTATCCATTGTCATGCAGGGCTTGGTCGAACA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAAAATCTGCTGCCACTaGAGTGGGGTTAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNKICCH*SGVRRV
Trigger: AACCCGCCTAACCCCACTGCAGTGGCAGCAGATTTT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCATTGTCAAAATCTGCTaGCACTGCAGTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVIVKIC*HCSGVR
Trigger: CCTAACCCCACTGCAGTGGCAGCAGATTTTGACAAT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTCGATTGTCAAAATCTaGTGCCACTGCAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVSIVKI*CHCSGV
Trigger: AACCCCACTGCAGTGGCAGCAGATTTTGACAATCGA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTCGATTGTCAAAATCTaGTGCCACTGCAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYSIVKI*CHCSGV
Trigger: AACCCCACTGCAGTGGCAGCAGATTTTGACAATCGA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAGCTCCACTCTGCTGTaGTTCCTTTGGAATGATCCT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYSSTLL*FLWNDP
Trigger: AGGATCATTCCAAAGGAAGCACAGCAGAGTGGAGCT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGAGAAAGCTCCACTCTaGTGTGCTTCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVEKAPL*CASFGM
Trigger: CATTCCAAAGGAAGCACAGCAGAGTGGAGCTTTCTC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTTCAACCAAGAACTGTaGTTTGGGACTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVFNQEL*FGTGAT
Trigger: TGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACACAGGCTCCTTCAGTTaGTCCACCCAAGACCACATC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNTGSFS*STQDHI
Trigger: GATGTGGTCTTGGGTGGAGCAACTGAAGGAGCCTGT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAACAGAGCCCCTGCCCTaGACGAATATCCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQATEPLP*TNIPVE
Trigger: CTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTTTTTAGTTGTGCCATaGTATGGTCACATCATAACT +
Preference number: 4 (lower is better)
Translates to: TNIPVESPGGQRQALLLSFLVVP*YGHIIT
Trigger: AGTTATGATGTGACCATAGCATGGCACAACTAAAAA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCATTTCCTTTCATGTTTaGAACACACTCGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPISFHV*NTLAVI
Trigger: AATAACAGCGAGTGTGTTGCAAACATGAAAGGAAAT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTGGTTTGTATGGAATTaGGTCGCTTTGCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVWFVWN*VALPAQ
Trigger: TTGTGCGGGCAAAGCGACCCAATTCCATACAAACCA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAGAGGAGCTGTCCTCTaGTTTGTATGGAATTGGGTC +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYRGAVL*FVWNWV
Trigger: GACCCAATTCCATACAAACCAGAGGACAGCTCCTCT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTGCTGCCTGGGCTTGTaGCCAACCAAGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVCCLGL*PTKIWA
Trigger: TGCCCAGATCTTGGTTGGCCACAAGCCCAGGCAGCA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCTGGTGAGCAGGGTTTaGATCCTTATGGACATTTGC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVLVSRV*ILMDIC
Trigger: GCAAATGTCCATAAGGATCCAAACCCTGCTCACCAG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAATGCCTTAATGGCATaGGCAAGGAAAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVNALMA*ARKASS
Trigger: GGAGGAAGCTTTCCTTGCCCATGCCATTAAGGCATT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGGTGTTGTAAACTGTTaGTCCATTTTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: GARATLLMLIHHQYKQWPGVVNC*SIFRIK
Trigger: TTTGATTCTGAAAATGGACCAACAGTTTACAACACC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAGTGGGAATAAGGCTTaGTGTGTTGAGAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVSGNKA*CVENCS
Trigger: GGAGCAGTTCTCAACACACCAAGCCTTATTCCCACT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTCTGCAGAGTGGCTGTaGCATCTGAGAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTSAEWL*HLREQG
Trigger: GCCCTGCTCTCTCAGATGCCACAGCCACTCTGCAGA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAGTGGGTCTATGGAGTaGCAGATTTGGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNSGSME*QIWECG
Trigger: CCCACACTCCCAAATCTGCCACTCCATAGACCCACT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTTCCCTCTGCATGGCTaGCTGAGGAAACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVFPLHG*LRKQPP
Trigger: TGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR TCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCCATGTGTCCAGGAATaGCATGCCGTAAACGCTCCC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTPCVQE*HAVNAP
Trigger: GGGAGCGTTTACGGCATGTCATTCCTGGACACATGG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCAGGGCGCTGGAGGTTaGTTATTGTTTTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYQGAGG*LLFLCH
Trigger: ATGGCATAAAAACAATAATCAACCTCCAGCGCCCTG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGATATTGAGGTAAGGTaGCAGCATGTGCTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYDIEVR*QHVLWD
Trigger: ATCCCAAAGCACATGCTGTCACCTTACCTCAATATC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCTGAGTCACTGTAGCTaGGCCGCCTTTTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTLSHCS*AAFSDE
Trigger: CTCATCTGAAAAGGCGGCTCAGCTACAGTGACTCAG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTATTTGCAAAGCTGGGTaGAACTGGCTCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVICKAG*NWLPRA
Trigger: AGCCCTGGGGAGCCAGTTTCACCCAGCTTTGCAAAT...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTCAAGCTGCATAGGATaGAAGGGTCCCTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTSSCIG*KGPSRH
Trigger: GTGGCGAGAGGGACCCTTTCATCCTATGCAGCTTGA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCCAAATATAAAGCCTTaGGGCAAGTGGGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYPNIKP*GKWVYG
Trigger: TCCATAGACCCACTTGCCTCAAGGCTTTATATTTGG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTATGGTTGTTCATTCTaGGGCAAGACTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNYGCSF*GKTPAA
Trigger: GGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGGAATTGGGTCGCTTTaGCCGCACAAATATAATTGC +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVGIGSL*PHKYNC
Trigger: GCAATTATATTTGTGCGGGCAAAGCGACCCAATTCC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAGAAAGAAAGTGTGCTaGGAACCAAGGCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVRKKVC*EPRLPC
Trigger: ACAAGGAAGCCTTGGTTCGCAGCACACTTTCTTTCT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAGAAAGAAAGTGTGCTaGGAACCAAGGCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYRKKVC*EPRLPC
Trigger: ACAAGGAAGCCTTGGTTCGCAGCACACTTTCTTTCT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTCCACGGGAATTGTCTaGAGGTTCACTATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNSTGIV*RFTMQC
Trigger: GCACTGCATAGTGAACCTGCAGACAATTCCCGTGGA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTCCACGGGAATTGTCTaGAGGTTCACTATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMSTGIV*RFTMQC
Trigger: GCACTGCATAGTGAACCTGCAGACAATTCCCGTGGA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGACAGAGGCAAGCCCTaGTTCTTAGCAACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNDRGKP*FLATFH
Trigger: GTGGAAAGTTGCTAAGAAGCAGGGCTTGCCTCTGTC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGGGTTTCCCTCTGCATaGCTGACTGAGGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAGFPSA*LTEETA
Trigger: GGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTACCGCCACACGCCATaGAACATGCCATGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVYRHTP*NMPCVQ
Trigger: CTGGACACATGGCATGTTCCATGGCGTGTGGCGGTA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCTCACTCCAGCGGGCTaGGTTCTCATACTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTLTPAG*VLILAS
Trigger: GCTTGCAAGTATGAGAACCCAGCCCGCTGGAGTGAG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTGCTCACCAGGGCGCTaGAGGTTGATTATTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYCSPGR*RLIIVF
Trigger: AAAAACAATAATCAACCTCCAGCGCCCTGGTGAGCA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGGGTTTGGATCCTTATaGACATTTGCAAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVGFGSL*TFAKLG
Trigger: ACCCAGCTTTGCAAATGTCCATAAGGATCCAAACCC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTTTGACAGCCAAGGCTaGCAAGGTTGTTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYFDSQG*QGCLEI
Trigger: GATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTGTAAAGATGCTATTTaGCTCAGCAGCAACCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVCKDAI*LSSNPR
Trigger: CCTTGGGTTGCTGCTGAGCCAAATAGCATCTTTACA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAGGCAAGTGGGTCTATaGAGTGGCAGATTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNRQVGL*SGRFGS
Trigger: ACTCCCAAATCTGCCACTCCATAGACCCACTTGCCT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAAATGCCAGCCTCCATaGAAGCCTCAGGAAGGTATG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTKCQPP*KPQEGM
Trigger: CATACCTTCCTGAGGCTTTCATGGAGGCTGGCATTT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCCACATCCTCTTTGGTaGTTACAGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNPHPLW*LQAPSV
Trigger: AACTGAAGGAGCCTGTAATCACCAAAGAGGATGTGG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGTCACCCTTCTTACATaGAGCCAGTTAGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNVTLLT*SQLGLM
Trigger: CATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGAC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGAGTCTTGCTTCCCCTaGAATTCCGTCTTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNESCFP*NSVFKQ
Trigger: CTGCTTAAAGACGGAATTTCAGGGGAAGCAAGACTC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTGTTCGACCAAGCCCTaGATGACAATGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNCSTKP*MTMDSY
Trigger: GTAGCTATCCATTGTCATGCAGGGCTTGGTCGAACA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTAAAATCTGCTGCCACTaGAGTGGGGTTAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVKICCH*SGVRRV
Trigger: AACCCGCCTAACCCCACTGCAGTGGCAGCAGATTTT...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGATTGTCAAAATCTGCTaGCACTGCAGTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMIVKIC*HCSGVR
Trigger: CCTAACCCCACTGCAGTGGCAGCAGATTTTGACAAT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTCCAGAAAGAAAGTGTaGTGCGAACCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNSRKKV*CEPRLP
Trigger: AGGAAGCCTTGGTTCGCAGCACACTTTCTTTCTGGA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAGCTCCACTCTGCTGTaGTTCCTTTGGAATGATCCT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNSSTLL*FLWNDP
Trigger: AGGATCATTCCAAAGGAAGCACAGCAGAGTGGAGCT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTACAGGCTCCTTCAGTTaGTCCACCCAAGACCACATC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTTGSFS*STQDHI
Trigger: GATGTGGTCTTGGGTGGAGCAACTGAAGGAGCCTGT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTGCTTCTGCGGCATCTaGTCGCCTGTCAACCAACAT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVCFCGI*SPVNQH
Trigger: ATGTTGGTTGACAGGCGAGCAGATGCCGCAGAAGCA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTCCACGGGAATTGTCTaGAGGTTCACTATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTSTGIV*RFTMQC
Trigger: GCACTGCATAGTGAACCTGCAGACAATTCCCGTGGA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGACAGAGGCAAGCCCTaGTTCTTAGCAACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTDRGKP*FLATFH
Trigger: GTGGAAAGTTGCTAAGAAGCAGGGCTTGCCTCTGTC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTGGTTTGTATGGAATTaGGTCGCTTTGCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMWFVWN*VALPAQ
Trigger: TTGTGCGGGCAAAGCGACCCAATTCCATACAAACCA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAGAGGAGCTGTCCTCTaGTTTGTATGGAATTGGGTC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNRGAVL*FVWNWV
Trigger: GACCCAATTCCATACAAACCAGAGGACAGCTCCTCT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTGGTTCTGGAGACTGTaGGATGTAACAATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVWFWRL*DVTMAY
Trigger: ATAAGCCATTGTTACATCCCACAGTCTCCAGAACCA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAATGCCTTAATGGCATaGGCAAGGAAAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNNALMA*ARKASS
Trigger: GGAGGAAGCTTTCCTTGCCCATGCCATTAAGGCATT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGAGTGGGAATAAGGCTTaGTGTGTTGAGAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMSGNKA*CVENCS
Trigger: GGAGCAGTTCTCAACACACCAAGCCTTATTCCCACT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAGTGGGTCTATGGAGTaGCAGATTTGGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTSGSME*QIWECG
Trigger: CCCACACTCCCAAATCTGCCACTCCATAGACCCACT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCCATGGCTGAGGAACTaGTCAATGATGTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTPWLRN*SMMWYF
Trigger: GAAGTACCACATCATTGATCAGTTCCTCAGCCATGG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCAGGGCGCTGGAGGTTaGTTATTGTTTTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNQGAGG*LLFLCH
Trigger: ATGGCATAAAAACAATAATCAACCTCCAGCGCCCTG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGATATTGAGGTAAGGTaGCAGCATGTGCTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMDIEVR*QHVLWD
Trigger: ATCCCAAAGCACATGCTGTCACCTTACCTCAATATC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTGTAACAATGGCTTATaGGCTTCTGCTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVCNNGL*ASAAWA
Trigger: AGCCCAGGCAGCAGAAGCTCATAAGCCATTGTTACA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCCTCCAAACTTTGACTaGCTCCAGAAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMPPNFD*LQKESV
Trigger: CACACTTTCTTTCTGGAGTCAGTCAAAGTTTGGAGG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAATATTCACCACGAGTaGAAGCTAGAGGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTNIHHE*KLEARL
Trigger: AAGCCTGGCCTCTAGCTTTCACTCGTGGTGAATATT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGTCACCCTTCTTACATaGAGCCAGTTAGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTVTLLT*SQLGLM
Trigger: CATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGAC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTGTCCAGGAATGACATaGCGTAAACGCTCCCCTACT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVCPGMT*RKRSPT
Trigger: AGTAGGGGAGCGTTTACGGCATGTCATTCCTGGACA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCATGTCCAGGAATGACATaGCGTAAACGCTCCCCTACT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQACPGMT*RKRSPT
Trigger: AGTAGGGGAGCGTTTACGGCATGTCATTCCTGGACA...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTGTTCGACCAAGCCCTaGATGACAATGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTCSTKP*MTMDSY
Trigger: GTAGCTATCCATTGTCATGCAGGGCTTGGTCGAACA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCCGCACAAATATAATTaGTTGGTCAGCAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYPHKYN*LVSSHS
Trigger: AGAATGACTGCTGACCAAGCAATTATATTTGTGCGG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGAGAAAGAAAGTGTGCTaGGAACCAAGGCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMRKKVC*EPRLPC
Trigger: ACAAGGAAGCCTTGGTTCGCAGCACACTTTCTTTCT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTCCAGAAAGAAAGTGTaGTGCGAACCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTSRKKV*CEPRLP
Trigger: AGGAAGCCTTGGTTCGCAGCACACTTTCTTTCTGGA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAGCTCCACTCTGCTGTaGTTCCTTTGGAATGATCCT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTSSTLL*FLWNDP
Trigger: AGGATCATTCCAAAGGAAGCACAGCAGAGTGGAGCT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCAGAGAATAGTCTGGTaGTGTCCCTTCTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYQRIVW*CPFSNK
Trigger: TTTATTAGAGAAGGGACAGCACCAGACTATTCTCTG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAGGTTCACTATGCAGTaGAACACGCAGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNRFTMQ*NTQRIV
Trigger: GACTATTCTCTGCGTGTTGCACTGCATAGTGAACCT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACATTAACCTTAGTGAATaGCTTAATGGCATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYINLSE*LNGMGK
Trigger: CTTGCCCATGCCATTAAGGCATTCACTAAGGTTAAT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGACAGAGGCAAGCCCTaGTTCTTAGCAACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQADRGKP*FLATFH
Trigger: GTGGAAAGTTGCTAAGAAGCAGGGCTTGCCTCTGTC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGTCCTCTGGTTTGTATaGAATTGGGTCGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTVLWFV*NWVALP
Trigger: GGGCAAAGCGACCCAATTCCATACAAACCAGAGGAC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGGGTTTGGATCCTTATaGACATTTGCAAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNGFGSL*TFAKLG
Trigger: ACCCAGCTTTGCAAATGTCCATAAGGATCCAAACCC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAATTTGCTAGGGCTTTaGCCGCCAGTATTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNNLLGL*PPVFFL
Trigger: CAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGAATTTGCTAGGGCTTTaGCCGCCAGTATTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMNLLGL*PPVFFL
Trigger: CAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGACGCAGAGAATAGTCTaGTGCTGTCCCTTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMTQRIV*CCPFSN
Trigger: ATTAGAGAAGGGACAGCACCAGACTATTCTCTGCGT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAATGCCTTAATGGCATaGGCAAGGAAAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTNALMA*ARKASS
Trigger: GGAGGAAGCTTTCCTTGCCCATGCCATTAAGGCATT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTTCTTAGTTCATCTGTaGGGGAATGGATACACAATG +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYFLVHL*GNGYTM
Trigger: CATTGTGTATCCATTCCCCCACAGATGAACTAAGAA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTTTGACAGCCAAGGCTaGCAAGGTTGTTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNFDSQG*QGCLEI
Trigger: GATTTCCAAACAACCTTGCCAGCCTTGGCTGTCAAA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTAGGCAAGTGGGTCTATaGAGTGGCAGATTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVRQVGL*SGRFGS
Trigger: ACTCCCAAATCTGCCACTCCATAGACCCACTTGCCT...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTATCCTCTCTGTGGCTTaGCCTCTGGTATCTACGTAT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTILSVA*PLVSTY
Trigger: ATACGTAGATACCAGAGGCCAAGCCACAGAGAGGAT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAAGACATTTCAGGGATaGGCAACCCACTCCATTAAC +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNKTFQG*ATHSIN
Trigger: GTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTCGACCAAGCCCTGCATaGCAATGGATAGCTACTTTT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVRPSPA*QWIATF
Trigger: AAAAGTAGCTATCCATTGTCATGCAGGGCTTGGTCG...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTATCCAGCTGCATGGTaGCCATCTCAGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTYPAAW*PSQTLS
Trigger: AGACAATGTCTGAGATGGTCACCATGCAGCTGGATA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACCACATCCTCTTTGGTaGTTACAGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAPHPLW*LQAPSV
Trigger: AACTGAAGGAGCCTGTAATCACCAAAGAGGATGTGG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCCACATCCTCTTTGGTaGTTACAGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTPHPLW*LQAPSV
Trigger: AACTGAAGGAGCCTGTAATCACCAAAGAGGATGTGG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAATATTCACCACGAGTaGAAGCTAGAGGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTNIHHE*KLEARL
Trigger: AAGCCTGGCCTCTAGCTTTCACTCGTGGTGAATATT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGAGTCTTGCTTCCCCTaGAATTCCGTCTTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAESCFP*NSVFKQ
Trigger: CTGCTTAAAGACGGAATTTCAGGGGAAGCAAGACTC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAGCAAGAGAATATATTaGGGAGAGGAGTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVSKRIY*GEELET
Trigger: AGTTTCTAACTCCTCTCCGCAATATATTCTCTTGCT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTATTGTCAAAATCTGCTaGCACTGCAGTGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTIVKIC*HCSGVR
Trigger: CCTAACCCCACTGCAGTGGCAGCAGATTTTGACAAT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTCGATTGTCAAAATCTaGTGCCACTGCAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVSIVKI*CHCSGV
Trigger: AACCCCACTGCAGTGGCAGCAGATTTTGACAATCGA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTCCAGAAAGAAAGTGTaGTGCGAACCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVSRKKV*CEPRLP
Trigger: AGGAAGCCTTGGTTCGCAGCACACTTTCTTTCTGGA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTTCAACCAAGAACTGTaGTTTGGGACTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTFNQEL*FGTGAT
Trigger: TGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCATTCAACCAAGAACTGTaGTTTGGGACTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAFNQEL*FGTGAT
Trigger: TGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAA...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAGGTTCACTATGCAGTaGAACACGCAGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTRFTMQ*NTQRIV
Trigger: GACTATTCTCTGCGTGTTGCACTGCATAGTGAACCT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCATGGTGTGTTGAGAACTaGTCCTGCCTCCTTTTGACA +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAWCVEN*SCLLLT
Trigger: TGTCAAAAGGAGGCAGGAGCAGTTCTCAACACACCA...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTGCTCACCAGGGCGCTaGAGGTTGATTATTGTTTTT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTCSPGR*RLIIVF
Trigger: AAAAACAATAATCAACCTCCAGCGCCCTGGTGAGCA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTGGTTTGTATGGAATTaGGTCGCTTTGCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVWFVWN*VALPAQ
Trigger: TTGTGCGGGCAAAGCGACCCAATTCCATACAAACCA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCATGGTTTGTATGGAATTaGGTCGCTTTGCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAWFVWN*VALPAQ
Trigger: TTGTGCGGGCAAAGCGACCCAATTCCATACAAACCA...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAAGAGGAGCTGTCCTCTaGTTTGTATGGAATTGGGTC +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQARGAVL*FVWNWV
Trigger: GACCCAATTCCATACAAACCAGAGGACAGCTCCTCT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTGGTTCTGGAGACTGTaGGATGTAACAATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNWFWRL*DVTMAY
Trigger: ATAAGCCATTGTTACATCCCACAGTCTCCAGAACCA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGGGTTTGGATCCTTATaGACATTTGCAAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTGFGSL*TFAKLG
Trigger: ACCCAGCTTTGCAAATGTCCATAAGGATCCAAACCC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACTGGTGAGCAGGGTTTaGATCCTTATGGACATTTGC +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQALVSRV*ILMDIC
Trigger: GCAAATGTCCATAAGGATCCAAACCCTGCTCACCAG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAATTTGCTAGGGCTTTaGCCGCCAGTATTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTNLLGL*PPVFFL
Trigger: CAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAATGCCTTAATGGCATaGGCAAGGAAAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTNALMA*ARKASS
Trigger: GGAGGAAGCTTTCCTTGCCCATGCCATTAAGGCATT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTAGTGGGAATAAGGCTTaGTGTGTTGAGAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVSGNKA*CVENCS
Trigger: GGAGCAGTTCTCAACACACCAAGCCTTATTCCCACT...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCATCAGTACAAACAGTaGCCCAGTTTTGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTHQYKQ*PSFDFL
Trigger: GAGGAAGTCAAAACTGGGCCACTGTTTGTACTGATG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTATCCTCTCTGTGGCTTaGCCTCTGGTATCTACGTAT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVILSVA*PLVSTY
Trigger: ATACGTAGATACCAGAGGCCAAGCCACAGAGAGGAT...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACAGGGCGCTGGAGGTTaGTTATTGTTTTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAQGAGG*LLFLCH
Trigger: ATGGCATAAAAACAATAATCAACCTCCAGCGCCCTG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGAGAGGAGTTAGAAACTaGGTAAATTCCCTTACACAG +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMRGVRN*VNSLTQ
Trigger: CTGTGTAAGGGAATTTACTCAGTTTCTAACTCCTCT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTGGCGAATTAGATATTaGGGTAAGGTGACAGCATGT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTWRIRY*GKVTAC
Trigger: ACATGCTGTCACCTTACCTCAATATCTAATTCGCCA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACCTCCAAACTTTGACTaGCTCCAGAAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAPPNFD*LQKESV
Trigger: CACACTTTCTTTCTGGAGTCAGTCAAAGTTTGGAGG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTCCAAATATAAAGCCTTaGGGCAAGTGGGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVPNIKP*GKWVYG
Trigger: TCCATAGACCCACTTGCCTCAAGGCTTTATATTTGG...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGCTTCAACTGATAATTaGTGGTTCAGCTTACAAGGA +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMASTDN*WFSLQG
Trigger: TCCTTGTAAGCTGAACCATCAATTATCAGTTGAAGC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGGAATTGGGTCGCTTTaGCCGCACAAATATAATTGC +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAGIGSL*PHKYNC
Trigger: GCAATTATATTTGTGCGGGCAAAGCGACCCAATTCC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGTGTTTCAGAAGTCGTaGCTCATAACCATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTVFQKS*LITMKQ
Trigger: CTGCTTCATGGTTATGAGGCACGACTTCTGAAACAC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGTGTTTCAGAAGTCGTaGCTCATAACCATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAVFQKS*LITMKQ
Trigger: CTGCTTCATGGTTATGAGGCACGACTTCTGAAACAC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAGAGGGTCAAACTGTTaGTCATTGGAGAAAATCATG +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNRGSNC*SLEKIM
Trigger: CATGATTTTCTCCAATGAGCAACAGTTTGACCCTCT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCAGAGAATAGTCTGGTaGTGTCCCTTCTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMQRIVW*CPFSNK
Trigger: TTTATTAGAGAAGGGACAGCACCAGACTATTCTCTG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGATTAACCTTAGTGAATaGCTTAATGGCATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMINLSE*LNGMGK
Trigger: CTTGCCCATGCCATTAAGGCATTCACTAAGGTTAAT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTTTTTAGTTGTGCCATaGTATGGTCACATCATAACT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVFLVVP*YGHIIT
Trigger: AGTTATGATGTGACCATAGCATGGCACAACTAAAAA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCATGCTCACCAGGGCGCTaGAGGTTGATTATTGTTTTT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQACSPGR*RLIIVF
Trigger: AAAAACAATAATCAACCTCCAGCGCCCTGGTGAGCA...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCACAAATATAATTGCTTaGTCAGCAGTCATTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GSHPSYMKPVRANATCMVTNIIA*SAVILV
Trigger: AACGAGAATGACTGCTGACCAAGCAATTATATTTGT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACACAAATATAATTGCTTaGTCAGCAGTCATTCTCGTT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYTNIIA*SAVILV
Trigger: AACGAGAATGACTGCTGACCAAGCAATTATATTTGT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAATTTGCAAACTAGGTaGATAATTTTTGGCACGTGT +
Preference number: 4 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYNLQTR*IIFGTC
Trigger: ACACGTGCCAAAAATTATCCACCTAGTTTGCAAATT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCAAACTGTTGCTCATTaGAGAAAATCATGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNQTVAH*RKSCLD
Trigger: ATCGAGGCATGATTTTCTCCAATGAGCAACAGTTTG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGGAATGATCCTTCCATaGAAAATTGGTGACCCATTA +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNGMILP*KIGDPL
Trigger: TAATGGGTCACCAATTTTCCATGGAAGGATCATTCC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGGGTTTGGATCCTTATaGACATTTGCAAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAGFGSL*TFAKLG
Trigger: ACCCAGCTTTGCAAATGTCCATAAGGATCCAAACCC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGAGATCTTTACTGTCCTaGGTTTCATGTTCAACCAAG +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMRSLLS*VSCSTK
Trigger: CTTGGTTGAACATGAAACCCAGGACAGTAAAGATCT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAACGCAGAGAATAGTCTaGTGCTGTCCCTTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQATQRIV*CCPFSN
Trigger: ATTAGAGAAGGGACAGCACCAGACTATTCTCTGCGT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGCTGGCAAGGTTGTTTaGAAATCTGACAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTAGKVV*KSDKEQ
Trigger: TTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCATGTAAAGATGCTATTTaGCTCAGCAGCAACCCAAGG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQACKDAI*LSSNPR
Trigger: CCTTGGGTTGCTGCTGAGCCAAATAGCATCTTTACA...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGAGTTGTGCCATGCTATaGTCACATCATAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMSCAML*SHHNCS
Trigger: AGAACAGTTATGATGTGACCATAGCATGGCACAACT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAGAGGAGTTAGAAACTaGGTAAATTCCCTTACACAG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTRGVRN*VNSLTQ
Trigger: CTGTGTAAGGGAATTTACTCAGTTTCTAACTCCTCT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTGGCGAATTAGATATTaGGGTAAGGTGACAGCATGT +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVWRIRY*GKVTAC
Trigger: ACATGCTGTCACCTTACCTCAATATCTAATTCGCCA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTCCATGGAAAATTGGTaGCCCATTATCTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVSMENW*PIIFES
Trigger: GGACTCAAAGATAATGGGTCACCAATTTTCCATGGA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGAATTAAGCTCTTTCTaGCACATTTCTACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNELSSF*HISTFL
Trigger: AAGGAAGGTAGAAATGTGGCAGAAAGAGCTTAATTC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGGTTCTGGAGACTGTaGGATGTAACAATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTWFWRL*DVTMAY
Trigger: ATAAGCCATTGTTACATCCCACAGTCTCCAGAACCA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTCATCTGTGGGGGAATaGATACACAATGAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTSSVGE*IHNEVL
Trigger: TAAAACCTCATTGTGTATCCATTCCCCCACAGATGA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGCTGGCAAGGTTGTTTaGAAATCTGACAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTAGKVV*KSDKEQ
Trigger: TTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGTCCATTAACATCCACTaGACTCAATTTCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LGSHPSYMKPVRANATCMSINIH*TQFPKK
Trigger: TTTCTTGGGAAATTGAGTCCAGTGGATGTTAATGGA...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAGTTGTGCCATGCTATaGTCACATCATAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTSCAML*SHHNCS
Trigger: AGAACAGTTATGATGTGACCATAGCATGGCACAACT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAGAGGAGTTAGAAACTaGGTAAATTCCCTTACACAG +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTRGVRN*VNSLTQ
Trigger: CTGTGTAAGGGAATTTACTCAGTTTCTAACTCCTCT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAAGAGGAGTTAGAAACTaGGTAAATTCCCTTACACAG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQARGVRN*VNSLTQ
Trigger: CTGTGTAAGGGAATTTACTCAGTTTCTAACTCCTCT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGGTTGTTTGGAAATCTaGCAAAGAGCAAGTCTACTT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAGCLEI*QRASLL
Trigger: AAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR TCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGCTTCAACTGATAATTaGTGGTTCAGCTTACAAGGA +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAASTDN*WFSLQG
Trigger: TCCTTGTAAGCTGAACCATCAATTATCAGTTGAAGC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCCGCACAAATATAATTaGTTGGTCAGCAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTPHKYN*LVSSHS
Trigger: AGAATGACTGCTGACCAAGCAATTATATTTGTGCGG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCATTGGAGAAAATCATaGCTCGATTGTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTHWRKS*LDCQNL
Trigger: CAGATTTTGACAATCGAGGCATGATTTTCTCCAATG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAAGAGGGTCAAACTGTTaGTCATTGGAGAAAATCATG +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQARGSNC*SLEKIM
Trigger: CATGATTTTCTCCAATGAGCAACAGTTTGACCCTCT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGAATTAAGCTCTTTCTaGCACATTTCTACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTELSSF*HISTFL
Trigger: AAGGAAGGTAGAAATGTGGCAGAAAGAGCTTAATTC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCAGAGAATAGTCTGGTaGTGTCCCTTCTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTQRIVW*CPFSNK
Trigger: TTTATTAGAGAAGGGACAGCACCAGACTATTCTCTG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTCAGAGAATAGTCTGGTaGTGTCCCTTCTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVQRIVW*CPFSNK
Trigger: TTTATTAGAGAAGGGACAGCACCAGACTATTCTCTG...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCAAACTGTTGCTCATTaGAGAAAATCATGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTQTVAH*RKSCLD
Trigger: ATCGAGGCATGATTTTCTCCAATGAGCAACAGTTTG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGGAATGATCCTTCCATaGAAAATTGGTGACCCATTA +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTGMILP*KIGDPL
Trigger: TAATGGGTCACCAATTTTCCATGGAAGGATCATTCC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGGAATGATCCTTCCATaGAAAATTGGTGACCCATTA +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAGMILP*KIGDPL
Trigger: TAATGGGTCACCAATTTTCCATGGAAGGATCATTCC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGGTGTTGTAAACTGTTaGTCCATTTTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: SHPSYMKPVRANATCMVNGVVNC*SIFRIK
Trigger: TTTGATTCTGAAAATGGACCAACAGTTTACAACACC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTTCTTAGTTCATCTGTaGGGGAATGGATACACAATG +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVFLVHL*GNGYTM
Trigger: CATTGTGTATCCATTCCCCCACAGATGAACTAAGAA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAGCAAGAGAATATATTaGGGAGAGGAGTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTSKRIY*GEELET
Trigger: AGTTTCTAACTCCTCTCCGCAATATATTCTCTTGCT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAAGCAAGAGAATATATTaGGGAGAGGAGTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQASKRIY*GEELET
Trigger: AGTTTCTAACTCCTCTCCGCAATATATTCTCTTGCT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAATTTGCAAACTAGGTaGATAATTTTTGGCACGTGT +
Preference number: 4 (lower is better)
Translates to: ENKTFQGWATHSINIHWTNLQTR*IIFGTC
Trigger: ACACGTGCCAAAAATTATCCACCTAGTTTGCAAATT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTCCATTAACATCCACTaGACTCAATTTCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVSINIH*TQFPKK
Trigger: TTTCTTGGGAAATTGAGTCCAGTGGATGTTAATGGA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR GCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTATTTCCTTTCATGTTTaGAACACACTCGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTISFHV*NTLAVI
Trigger: AATAACAGCGAGTGTGTTGCAAACATGAAAGGAAAT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS-3UTR CCA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTAATTTGCAAACTAGGTaGATAATTTTTGGCACGTGT +
Preference number: 4 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTNLQTR*IIFGTC
Trigger: ACACGTGCCAAAAATTATCCACCTAGTTTGCAAATT...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CCA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGGTGTTGTAAACTGTTaGTCCATTTTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAGVVNC*SIFRIK
Trigger: TTTGATTCTGAAAATGGACCAACAGTTTACAACACC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 90 bp ACCAGGGCGCGGCCGGCCCGGAGACGCTGCCCCGCGGAGGGTCTGTaGGTAGCGGGCCCGAGGGCAGCCTCTGCGCACCCTCACGGCGCG +
Preference number: 5 (lower is better)
Translates to: TRARPARRRCPAEGL*VAGPRAASAHPHGA
Trigger: CGCGCCGTGAGGGTGCGCAGAGGCTGCCCTCGGGCCCGCTACCCACAGACCCTCCGCGGGGCAGCGTCTCCGGGCCGGCCGCGCCCTGGT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS GCA 90 bp GTCGTCTGCGGTCGGCGGACCAGGGCGCGGCCGGCCCGGAGACGCTaGCCCGCGGAGGGTCTGTGGGTAGCGGGCCCGAGGGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VVCGRRTRARPARRR*PAEGLWVAGPRAAS
Trigger: AGAGGCTGCCCTCGGGCCCGCTACCCACAGACCCTCCGCGGGGCAGCGTCTCCGGGCCGGCCGCGCCCTGGTCCGCCGACCGCAGACGAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS GCA 90 bp CTGCCCCGCGGAGGGTCTGTGGGTAGCGGGCCCGAGGGCAGCCTCTaGGCACCCTCACGGCGCGGCACCGATCCCTGCTGCTCCCGACGC +
Preference number: 5 (lower is better)
Translates to: LPRGGSVGSGPEGSL*APSRRGTDPCCSRR
Trigger: GCGTCGGGAGCAGCAGGGATCGGTGCCGCGCCGTGAGGGTGCGCAGAGGCTGCCCTCGGGCCCGCTACCCACAGACCCTCCGCGGGGCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS GCA 90 bp CCCCGCCGGGCCTGCTGCAGCCGCAGTACTGGGTCTGAGGTGGAGTaGCGGCGGCCCTGGAGAAAGGAGCTGAGGAAGCGCACGGCTGAG +
Preference number: 5 (lower is better)
Translates to: PRRACCSRSTGSEVE*RRPWRKELRKRTAE
Trigger: CTCAGCCGTGCGCTTCCTCAGCTCCTTTCTCCAGGGCCGCCGGCACTCCACCTCAGACCCAGTACTGCGGCTGCAGCAGGCCCGGCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS TCA 90 bp CAAGCCAGAGCCCCGCCGGGCCTGCTGCAGCCGCAGTACTGGGTCTaGGGTGGAGTGCCGGCGGCCCTGGAGAAAGGAGCTGAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: QARAPPGLLQPQYWV*GGVPAALEKGAEEA
Trigger: CGCTTCCTCAGCTCCTTTCTCCAGGGCCGCCGGCACTCCACCTCAGACCCAGTACTGCGGCTGCAGCAGGCCCGGCGGGGCTCTGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS CCA 90 bp ACTCTAGCCTTTTCCCGCTCGAGATTCCAAGCCCTCGGCGCCGGCTaGGGTCAGCAGGACGCGCCGTCCGTGTCACAAGTCGTCTGCGGT +
Preference number: 5 (lower is better)
Translates to: TLAFSRSRFQALGAG*GQQDAPSVSQVVCG
Trigger: ACCGCAGACGACTTGTGACACGGACGGCGCGTCCTGCTGACCCCAGCCGGCGCCGAGGGCTTGGAATCTCGAGCGGGAAAAGGCTAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650567.1
CDS CCA 90 bp ATGGTAGTCTTTTCCCGCTCGAGATTCCAAGCCCTCGGCGCCGGCTaGGGTCAGCAGGACGCGCCGTCCGTGTCACAAGTCGTCTGCGGT +
Preference number: 5 (lower is better)
Translates to: MVVFSRSRFQALGAG*GQQDAPSVSQVVCG
Trigger: ACCGCAGACGACTTGTGACACGGACGGCGCGTCCTGCTGACCCCAGCCGGCGCCGAGGGCTTGGAATCTCGAGCGGGAAAAGACTACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTATGGAGTGGCAGATTaGGGAGTGTGGGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALYGVAD*GVWGQG
Trigger: GCCCTGGCCCCACACTCCCAAATCTGCCACTCCATA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCTGAGGGCCGCCTGGTaGCATCCTGCACCTGCATGG +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSLRAAW*HPAPAW
Trigger: CCATGCAGGTGCAGGATGCAACCAGGCGGCCCTCAG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGAACCCCCTTAATGGCTaGCTCCTGCTCACTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALNPLNG*LLLTPA
Trigger: CGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGGGTT...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCAGATGAGTCAGGGGTaGAAGGCACTCAACATTCCG +
Preference number: 5 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRQMSQG*KALNIP
Trigger: CGGAATGTTGAGTGCCTTCAACCCCTGACTCATCTG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTTCTGCTGCCTGGGCTaGTGGCCAACCAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALFCCLG*WPTKIW
Trigger: CCAGATCTTGGTTGGCCACAAGCCCAGGCAGCAGAA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCCACATCCACGGGAATaGTCTGCAGGTTCACTATGC +
Preference number: 5 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRPHPRE*SAGSLC
Trigger: GCATAGTGAACCTGCAGACAATTCCCGTGGATGTGG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTGCTCCTGCCTCCTTTaGACAGCCAAGGCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALCSCLL*TAKAGK
Trigger: CTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 90 bp GCGCTGCCCACAAGAGTGAAAGACTCAGGCTCCAGAGTGCAGAACTaGGACCCCTCCCAGCCTCTCCACTTCCAGGCTGGACACTGGACT +
Preference number: 5 (lower is better)
Translates to: ALPTRVKDSGSRVQN*DPSQPLHFQAGHWT
Trigger: AGTCCAGTGTCCAGCCTGGAAGTGGAGAGGCTGGGAGGGGTCCCAGTTCTGCACTCTGGAGCCTGAGTCTTTCACTCTTGTGGGCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGCTGGGTTCTCATACTaGCAAGCTCTACCGCCACAC +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALAGFSY*QALPPH
Trigger: GTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAGC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCTGTGGAGTCTCCCCTaGCTCCAGGAGGTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPLWSLP*LQEVLG
Trigger: GCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACAG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCAGATGAGTCAGGGGTaGAAGGCACTCAACATTCCG +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALQMSQG*KALNIP
Trigger: CGGAATGTTGAGTGCCTTCAACCCCTGACTCATCTG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCCAGGCCTCCAAACTTaGACTGACTCCAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRPGLQT*TDSRKK
Trigger: TTTCTTTCTGGAGTCAGTCAAAGTTTGGAGGCCTGG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 90 bp TGGCTTATGAGCTTCTGCTGCCTGGGCTTGTGGCCAACCAAGATCTaGGCAGGCACTGTCTGTGGAGTCTCCCCTTGCTCCAGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: WLMSFCCLGLWPTKI*AGTVCGVSPCSRRF
Trigger: GAACCTCCTGGAGCAAGGGGAGACTCCACAGACAGTGCCTGCCCAGATCTTGGTTGGCCACAAGCCCAGGCAGCAGAAGCTCATAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCGAACCAAGGCTTCCTaGTGTAAGTCTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALRTKAS*CKSGSG
Trigger: TCCAGAACCAGACTTACACAAGGAAGCCTTGGTTCG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGCTGGTGAGCAGGGTTaGGATCCTTATGGACATTTG +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALAGEQG*DPYGHL
Trigger: CAAATGTCCATAAGGATCCAAACCCTGCTCACCAGC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTGCTCCTGCCTCCTTTaGACAGCCAAGGCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPCSCLL*TAKAGK
Trigger: CTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp TGGAGCCACAGTCCAGAGGGCTTCGGGGTGTCCTGCTGTTCTGCCTaGCAGAGCCAGGGCTCCCAACACCATGAGTTTTACACTGACAGT +
Preference number: 5 (lower is better)
Translates to: WSHSPEGFGVSCCSA*QSQGSQHHEFYTDS
Trigger: ACTGTCAGTGTAAAACTCATGGTGTTGGGAGCCCTGGCTCTGTCAGGCAGAACAGCAGGACACCCCGAAGCCCTCTGGACTGTGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCTGGCACAGAGCCCCTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGCAGCAAGAGAATATATaGCGGAGAGGAGTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: GWHRAPALHEYPCGVPGRQQENI*RRGVRN
Trigger: GTTTCTAACTCCTCTCCGCAATATATTCTCTTGCTG...CCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAGGGGCTCTGTGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGGTGACAGCATGTGCTTaGGGATCACAGCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALVTACA*GSQQEN
Trigger: ATTCTCTTGCTGTGATCCCAAAGCACATGCTGTCAC...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCTGGTTTGTATGGAATaGGGTCGCTTTGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSLVCME*GRFART
Trigger: TGTGCGGGCAAAGCGACCCAATTCCATACAAACCAG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCTGGTTTGTATGGAATaGGGTCGCTTTGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPLVCME*GRFART
Trigger: TGTGCGGGCAAAGCGACCCAATTCCATACAAACCAG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCAGATGAGTCAGGGGTaGAAGGCACTCAACATTCCG +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPQMSQG*KALNIP
Trigger: CGGAATGTTGAGTGCCTTCAACCCCTGACTCATCTG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGGTGACCCATTATCTTaGAGTCCTTCCAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPGDPLS*SPSRPP
Trigger: TGGAGGCCTGGAAGGACTCAAAGATAATGGGTCACC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGGTGACCCATTATCTTaGAGTCCTTCCAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSGDPLS*SPSRPP
Trigger: TGGAGGCCTGGAAGGACTCAAAGATAATGGGTCACC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCCCACATCCACGGGAATaGTCTGCAGGTTCACTATGC +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSPHPRE*SAGSLC
Trigger: GCATAGTGAACCTGCAGACAATTCCCGTGGATGTGG...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAACAGTGGCCCAGTTTaGACTTCCTCCAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSNSGPV*TSSSSK
Trigger: CTTGGAGCTGGAGGAAGTCAAAACTGGGCCACTGTT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 90 bp TACTGTCCTGGGTTTCATGTTCAACCAAGAACTGTGCTTTGGGACTaGAGCCACAGTCCAGAGGGCTTCGGGGTGTCCTGCTGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: YCPGFHVQPRTVLWD*SHSPEGFGVSCCSA
Trigger: GGCAGAACAGCAGGACACCCCGAAGCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAACATGAAACCCAGGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTGTGAAGCCACTTTCTaGTTCCAGAGGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSCEATF*FQRVPT
Trigger: TGTGGGAACCCTCTGGAACAAGAAAGTGGCTTCACA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGAGCTGTCCTCTGGTTaGTATGGAATTGGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPELSSG*YGIGSL
Trigger: AAGCGACCCAATTCCATACAAACCAGAGGACAGCTC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCAGCAAGAGAATATATaGCGGAGAGGAGTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALQQENI*RRGVRN
Trigger: GTTTCTAACTCCTCTCCGCAATATATTCTCTTGCTG...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CTGCCCTGCACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGTCAAACTGTTGCTCATaGGAGAAAATCATGCCTCGA +
Preference number: 5 (lower is better)
Translates to: LPCTNIPVESPGGQRQALSNCCS*EKIMPR
Trigger: TCGAGGCATGATTTTCTCCAATGAGCAACAGTTTGA...CAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGTGCAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCTGTGGAGTCTCCCCTaGCTCCAGGAGGTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYLWSLP*LQEVLG
Trigger: GCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACAG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGCTGGTGAGCAGGGTTaGGATCCTTATGGACATTTG +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSAGEQG*DPYGHL
Trigger: CAAATGTCCATAAGGATCCAAACCCTGCTCACCAGC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGCTGGTGAGCAGGGTTaGGATCCTTATGGACATTTG +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPAGEQG*DPYGHL
Trigger: CAAATGTCCATAAGGATCCAAACCCTGCTCACCAGC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCTATCCTCTCTGTGGCTaGGCCTCTGGTATCTACGTA +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSYPLCG*ASGIYV
Trigger: TACGTAGATACCAGAGGCCAAGCCACAGAGAGGATA...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 90 bp GCTGCCACTGCAGTGGGGTTAGGCGGGTTGGACACATCACTGTCATaGCTCAGTAACTCTTTATCCAGCTGCATGGTGACCATCTCAGAC +
Preference number: 5 (lower is better)
Translates to: AATAVGLGGLDTSLS*LSNSLSSCMVTISD
Trigger: GTCTGAGATGGTCACCATGCAGCTGGATAAAGAGTTACTGAGGCATGACAGTGATGTGTCCAACCCGCCTAACCCCACTGCAGTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 90 bp CAGGGAGAGGAGAGGGAGGTGCACCATTTGACACTGCATGATTCTTaGGCTGCCCACAAGAGTGAAAGACTCAGGCTCCAGAGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: QGEEREVHHLTLHDS*AAHKSERLRLQSAE
Trigger: TTCTGCACTCTGGAGCCTGAGTCTTTCACTCTTGTGGGCAGCGCAAGAATCATGCAGTGTCAAATGGTGCACCTCCCTCTCCTCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCTGAGGGCCGCCTGGTaGCATCCTGCACCTGCATGG +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNLRAAW*HPAPAW
Trigger: CCATGCAGGTGCAGGATGCAACCAGGCGGCCCTCAG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCATGTCCACATCCTCTTaGGTGATTACAGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSMSTSS*VITGSF
Trigger: GAAGGAGCCTGTAATCACCAAAGAGGATGTGGACAT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp TCTTTTTCTTTCGGGGAAAGTTGGGTTTCCCTCTGCATGGCTGACTaGGGAAACAGCCACCATCACCTGGAGAGAGGACGAGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: SFSFGESWVSLCMAD*GNSHHHLERGRGQQ
Trigger: CTGCTGTCCTCGTCCTCTCTCCAGGTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGAAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288976.3
CDS TCA 90 bp CGGCATCTGCTCGCCTGTCAACCAACATGTCCACATCCTCTTTGGTaGTTACAGGCTCCTTCAGTTGCTCCACCCAAGACCACATCAAGC +
Preference number: 5 (lower is better)
Translates to: RHLLACQPTCPHPLW*LQAPSVAPPKTTSS
Trigger: GCTTGATGTGGTCTTGGGTGGAGCAACTGAAGGAGCCTGTAATCACCAAAGAGGATGTGGACATGTTGGTTGACAGGCGAGCAGATGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp ACTTTTTCTTTCGGGGAAAGTTGGGTTTCCCTCTGCATGGCTGACTaGGGAAACAGCCACCATCACCTGGAGAGAGGACGAGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: TFSFGESWVSLCMAD*GNSHHHLERGRGQQ
Trigger: CTGCTGTCCTCGTCCTCTCTCCAGGTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGAAAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620992.5
CDS CCA 90 bp GATCTTTACTGTCCTGGGTTTCATGTTCAACCAAGAACTGTGCTTTaGGACTGGAGCCACAGTCCAGAGGGCTTCGGGGTGTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: DLYCPGFHVQPRTVL*DWSHSPEGFGVSCC
Trigger: ACAGCAGGACACCCCGAAGCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAACATGAAACCCAGGACAGTAAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAACCCCCTTAATGGCTaGCTCCTGCTCACTCCAGCG +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYNPLNG*LLLTPA
Trigger: CGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGGGTT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCTGTGGAGTCTCCCCTaGCTCCAGGAGGTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNLWSLP*LQEVLG
Trigger: GCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACAG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTTCTGCTGCCTGGGCTaGTGGCCAACCAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVFCCLG*WPTKIW
Trigger: CCAGATCTTGGTTGGCCACAAGCCCAGGCAGCAGAA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCAAATTTGCTAGGGCTTaGGCCGCCAGTATTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPKFARA*AASILL
Trigger: AAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATTT...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTGCTCCTGCCTCCTTTaGACAGCCAAGGCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYCSCLL*TAKAGK
Trigger: CTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp GCTCCAGGAGGTTCTCGGCCCTCTTTAAATCTGAGTCACTGTAGCTaGGCCGCCTTTTCAGATGAGTCAGGGGTTGAAGGCACTCAACAT +
Preference number: 5 (lower is better)
Translates to: APGGSRPSLNLSHCS*AAFSDESGVEGTQH
Trigger: ATGTTGAGTGCCTTCAACCCCTGACTCATCTGAAAAGGCGGCTCAGCTACAGTGACTCAGATTTAAAGAGGGCCGAGAACCTCCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp GCTCCTTCAGTTGCTCCACCCAAGACCACATCAAGCTGCATAGGATaGAAGGGTCCCTCTCGCCACATATTCTTTCCCAAGCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: APSVAPPKTTSSCIG*KGPSRHIFFPKLHL
Trigger: GAGATGGAGCTTGGGAAAGAATATGTGGCGAGAGGGACCCTTTCATCCTATGCAGCTTGATGTGGTCTTGGGTGGAGCAACTGAAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp ACAGACAGAGACAGAGACAGGGAGAGGAGAGGGAGGTGCACCATTTaGCACTGCATGATTCTTGCGCTGCCCACAAGAGTGAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: TDRDRDRERRGRCTI*HCMILALPTRVKDS
Trigger: TGAGTCTTTCACTCTTGTGGGCAGCGCAAGAATCATGCAGTGTCAAATGGTGCACCTCCCTCTCCTCTCCCTGTCTCTGTCTCTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS GCA 90 bp CTACCGCCACACGCCATGGAACATGCCATGTGTCCAGGAATGACATaGCGTAAACGCTCCCCTACTTTTGTGTACTTTGGTGTTGGACGT +
Preference number: 5 (lower is better)
Translates to: LPPHAMEHAMCPGMT*RKRSPTFVYFGVGR
Trigger: ACGTCCAACACCAAAGTACACAAAAGTAGGGGAGCGTTTACGGCATGTCATTCCTGGACACATGGCATGTTCCATGGCGTGTGGCGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGCTGGGTTCTCATACTaGCAAGCTCTACCGCCACAC +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYAGFSY*QALPPH
Trigger: GTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAGC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCAGCAGTCATTCTCGTaGCAAAAACTAAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPQQSFS*QKLSNR
Trigger: CCTGTTACTTAGTTTTTGCAACGAGAATGACTGCTG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCCAGCAAGAGAATATATaGCGGAGAGGAGTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPQQENI*RRGVRN
Trigger: GTTTCTAACTCCTCTCCGCAATATATTCTCTTGCTG...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCAAAATCATGCCTCGATaGTCAAAATCTGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSKIMPR*SKSAAT
Trigger: AGTGGCAGCAGATTTTGACAATCGAGGCATGATTTT...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCTGTGGAGTCTCCCCTaGCTCCAGGAGGTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTLWSLP*LQEVLG
Trigger: GCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACAG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCACCAAGAACTGTGCTTaGGGACTGGAGCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVTKNCA*GLEPQS
Trigger: GGACTGTGGCTCCAGTCCCAAAGCACAGTTCTTGGT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp AAGCTCTACCGCCACACGCCATGGAACATGCCATGTGTCCAGGAATaGCATGCCGTAAACGCTCCCCTACTTTTGTGTACTTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: KLYRHTPWNMPCVQE*HAVNAPLLLCTLVL
Trigger: CAACACCAAAGTACACAAAAGTAGGGGAGCGTTTACGGCATGTCATTCCTGGACACATGGCATGTTCCATGGCGTGTGGCGGTAGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp CTTTACTTTTTCTTTCGGGGAAAGTTGGGTTTCCCTCTGCATGGCTaGCTGAGGAAACAGCCACCATCACCTGGAGAGAGGACGAGGACA +
Preference number: 5 (lower is better)
Translates to: LYFFFRGKLGFPLHG*LRKQPPSPGERTRT
Trigger: TGTCCTCGTCCTCTCTCCAGGTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGAAAAAGTAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620992.5
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCTGGTTTGTATGGAATaGGGTCGCTTTGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVLVCME*GRFART
Trigger: TGTGCGGGCAAAGCGACCCAATTCCATACAAACCAG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTGGGGTTAGGCGGGTaGGACACATCACTGTCATGC +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMVGLGG*DTSLSC
Trigger: GCATGACAGTGATGTGTCCAACCCGCCTAACCCCAC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGGTGACCCATTATCTTaGAGTCCTTCCAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVGDPLS*SPSRPP
Trigger: TGGAGGCCTGGAAGGACTCAAAGATAATGGGTCACC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCCACATCCACGGGAATaGTCTGCAGGTTCACTATGC +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYPHPRE*SAGSLC
Trigger: GCATAGTGAACCTGCAGACAATTCCCGTGGATGTGG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCGGGTGTTGTAAACTGTaGGTCCATTTTCAGAATCAA +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPGCCKL*VHFQNQ
Trigger: TTGATTCTGAAAATGGACCAACAGTTTACAACACCC...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACGAATATCCCTGTGGAGTCCCCGGGAGGACAGAGGCAAGCCCTGCTTCTTAGCGGGTGTTGTAAACTGTaGGTCCATTTTCAGAATCAA +
Preference number: 5 (lower is better)
Translates to: TNIPVESPGGQRQALLLSGCCKL*VHFQNQ
Trigger: TTGATTCTGAAAATGGACCAACAGTTTACAACACCC...GCTAAGAAGCAGGGCTTGCCTCTGTCCTCCCGGGGACTCCACAGGGATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp AATTTCTTTTTCTTTCGGGGAAAGTTGGGTTTCCCTCTGCATGGCTaGCTGAGGAAACAGCCACCATCACCTGGAGAGAGGACGAGGACA +
Preference number: 5 (lower is better)
Translates to: NFFFFRGKLGFPLHG*LRKQPPSPGERTRT
Trigger: TGTCCTCGTCCTCTCTCCAGGTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGAAAAAGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288976.3
CDS GCA 90 bp CTTCCAGGCCTCCAAACTTTGACTGACTCCAGAAAGAAAGTGTGCTaGGAACCAAGGCTTCCTTGTGTAAGTCTGGTTCTGGAGACTGTG +
Preference number: 5 (lower is better)
Translates to: LPGLQTLTDSRKKVC*EPRLPCVSLVLETV
Trigger: CACAGTCTCCAGAACCAGACTTACACAAGGAAGCCTTGGTTCGCAGCACACTTTCTTTCTGGAGTCAGTCAAAGTTTGGAGGCCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 90 bp GTCCTTCCAGGCCTCCAAACTTTGACTGACTCCAGAAAGAAAGTGTaGTGCGAACCAAGGCTTCCTTGTGTAAGTCTGGTTCTGGAGACT +
Preference number: 5 (lower is better)
Translates to: VLPGLQTLTDSRKKV*CEPRLPCVSLVLET
Trigger: AGTCTCCAGAACCAGACTTACACAAGGAAGCCTTGGTTCGCAGCACACTTTCTTTCTGGAGTCAGTCAAAGTTTGGAGGCCTGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 90 bp ACCAACATGTCCACATCCTCTTTGGTGATTACAGGCTCCTTCAGTTaGTCCACCCAAGACCACATCAAGCTGCATAGGATGAAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: TNMSTSSLVITGSFS*STQDHIKLHRMKGS
Trigger: GGACCCTTTCATCCTATGCAGCTTGATGTGGTCTTGGGTGGAGCAACTGAAGGAGCCTGTAATCACCAAAGAGGATGTGGACATGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS GCA 90 bp AGGTTAGCCAAGAATCTTGGGATAATGGAAAGTGTTAAACACATGTaGTGTACCCTGACTCTGCCACACGCATGCCACGTGACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: RLAKNLGIMESVKHM*CTLTLPHACHVTLS
Trigger: GCTCAGGGTCACGTGGCATGCGTGTGGCAGAGTCAGGGTACAGCACATGTGTTTAACACTTTCCATTATCCCAAGATTCTTGGCTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS CCA 90 bp TTTCCTTTACTTTTTCTTTCGGGGAAAGTTGGGTTTCCCTCTGCATaGCTGACTGAGGAAACAGCCACCATCACCTGGAGAGAGGACGAG +
Preference number: 5 (lower is better)
Translates to: FPLLFLSGKVGFPSA*LTEETATITWREDE
Trigger: CTCGTCCTCTCTCCAGGTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGAAAAAGTAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620992.5
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGCTGGGTTCTCATACTaGCAAGCTCTACCGCCACAC +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNAGFSY*QALPPH
Trigger: GTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAGC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAACCCCCTTAATGGCTaGCTCCTGCTCACTCCAGCG +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTNPLNG*LLLTPA
Trigger: CGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGGGTT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTGTGAAGCCACTTTCTaGTTCCAGAGGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYCEATF*FQRVPT
Trigger: TGTGGGAACCCTCTGGAACAAGAAAGTGGCTTCACA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGAGCTGTCCTCTGGTTaGTATGGAATTGGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVELSSG*YGIGSL
Trigger: AAGCGACCCAATTCCATACAAACCAGAGGACAGCTC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGAGCTGTCCTCTGGTTaGTATGGAATTGGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYELSSG*YGIGSL
Trigger: AAGCGACCCAATTCCATACAAACCAGAGGACAGCTC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCGAACCAAGGCTTCCTaGTGTAAGTCTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYRTKAS*CKSGSG
Trigger: TCCAGAACCAGACTTACACAAGGAAGCCTTGGTTCG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGCTGGTGAGCAGGGTTaGGATCCTTATGGACATTTG +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYAGEQG*DPYGHL
Trigger: CAAATGTCCATAAGGATCCAAACCCTGCTCACCAGC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGACCAAGAACTGTGCTTaGGGACTGGAGCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMTKNCA*GLEPQS
Trigger: GGACTGTGGCTCCAGTCCCAAAGCACAGTTCTTGGT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCCGCCAGTATTCTTCTaGCCTCAGCACTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVPPVFF*PQHSIQ
Trigger: CTGAATTGAGTGCTGAGGCAAGAAGAATACTGGCGG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCATATGGAGTGGCAGATTaGGGAGTGTGGGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAYGVAD*GVWGQG
Trigger: GCCCTGGCCCCACACTCCCAAATCTGCCACTCCATA...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTATGGAGTGGCAGATTaGGGAGTGTGGGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTYGVAD*GVWGQG
Trigger: GCCCTGGCCCCACACTCCCAAATCTGCCACTCCATA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACTATCCTCTCTGTGGCTaGGCCTCTGGTATCTACGTA +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYYPLCG*ASGIYV
Trigger: TACGTAGATACCAGAGGCCAAGCCACAGAGAGGATA...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGGGCCAGGGCCACGCTGCTCATGCTAATACACCATCAGTACAAACAGTGGCCCTTGTGTACTTTGGTGTaGGACGTTCTAAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: GARATLLMLIHHQYKQWPLCTLV*DVLNFL
Trigger: AAGGAAATTTAGAACGTCCAACACCAAAGTACACAA...GGGCCACTGTTTGTACTGATGGTGTATTAGCATGAGCAGCGTGGCCCTGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp GGTGACCCATTATCTTTGAGTCCTTCCAGGCCTCCAAACTTTGACTaGCTCCAGAAAGAAAGTGTGCTGCGAACCAAGGCTTCCTTGTGT +
Preference number: 5 (lower is better)
Translates to: GDPLSLSPSRPPNFD*LQKESVLRTKASLC
Trigger: ACACAAGGAAGCCTTGGTTCGCAGCACACTTTCTTTCTGGAGTCAGTCAAAGTTTGGAGGCCTGGAAGGACTCAAAGATAATGGGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 90 bp TATGTGAAGCCACTTTCTTGTTCCAGAGGGTTCCCACAGCTAGCATaGTCACCAGGGCGCTGGAGGTTGATTATTGTTTTTATGCCATGG +
Preference number: 5 (lower is better)
Translates to: YVKPLSCSRGFPQLA*SPGRWRLIIVFMPW
Trigger: CCATGGCATAAAAACAATAATCAACCTCCAGCGCCCTGGTGAGCATGCTAGCTGTGGGAACCCTCTGGAACAAGAAAGTGGCTTCACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 90 bp GCTTCCTCCACATCCACGGGAATTGTCTGCAGGTTCACTATGCAGTaGAACACGCAGAGAATAGTCTGGTGCTGTCCCTTCTCTAATAAA +
Preference number: 5 (lower is better)
Translates to: ASSTSTGIVCRFTMQ*NTQRIVWCCPFSNK
Trigger: TTTATTAGAGAAGGGACAGCACCAGACTATTCTCTGCGTGTTGCACTGCATAGTGAACCTGCAGACAATTCCCGTGGATGTGGAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAACGCTCCCCTACTTTaGTGTACTTTGGTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYNAPLL*CTLVLD
Trigger: GTCCAACACCAAAGTACACAAAAGTAGGGGAGCGTT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGCTCCCCTACTTTaGTGTACTTTGGTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVNAPLL*CTLVLD
Trigger: GTCCAACACCAAAGTACACAAAAGTAGGGGAGCGTT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAAACCCCCTTAATGGCTaGCTCCTGCTCACTCCAGCG +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQANPLNG*LLLTPA
Trigger: CGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGGGTT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCCAGGGCGCTGGAGGTaGATTATTGTTTTTATGCCA +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVPGRWR*IIVFMP
Trigger: TGGCATAAAAACAATAATCAACCTCCAGCGCCCTGG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCCAGGGCGCTGGAGGTaGATTATTGTTTTTATGCCA +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYPGRWR*IIVFMP
Trigger: TGGCATAAAAACAATAATCAACCTCCAGCGCCCTGG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCGTGACAGCATGTGCTTaGGGATCACAGCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVVTACA*GSQQEN
Trigger: ATTCTCTTGCTGTGATCCCAAAGCACATGCTGTCAC...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGTGACAGCATGTGCTTaGGGATCACAGCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYVTACA*GSQQEN
Trigger: ATTCTCTTGCTGTGATCCCAAAGCACATGCTGTCAC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGTGGGGTTAGGCGGGTaGGACACATCACTGTCATGC +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAVGLGG*DTSLSC
Trigger: GCATGACAGTGATGTGTCCAACCCGCCTAACCCCAC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTGTGGGGTTAGGCGGGTaGGACACATCACTGTCATGC +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVVGLGG*DTSLSC
Trigger: GCATGACAGTGATGTGTCCAACCCGCCTAACCCCAC...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTTCTGCTGCCTGGGCTaGTGGCCAACCAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVFCCLG*WPTKIW
Trigger: CCAGATCTTGGTTGGCCACAAGCCCAGGCAGCAGAA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCCAGGCCTCCAAACTTaGACTGACTCCAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVPGLQT*TDSRKK
Trigger: TTTCTTTCTGGAGTCAGTCAAAGTTTGGAGGCCTGG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCTCCTGCCTCCTTTaGACAGCCAAGGCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTCSCLL*TAKAGK
Trigger: CTTGCCAGCCTTGGCTGTCAAAAGGAGGCAGGAGCA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGATAAGGCTTGGTGTGTaGAGAACTGCTCCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMIRLGV*RTAPAS
Trigger: GGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTAT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGCCAAATATAAAGCCTaGAGGCAAGTGGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYAKYKA*RQVGLW
Trigger: CCATAGACCCACTTGCCTCAAGGCTTTATATTTGGC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp ACACACTCGCTGTTATTCACCAAGGTAGAATATGGTTGTTCATTCTaGGGCAAGACTCCTGCAGCCATGGTAGTCTTTTCCCGCTCGAGA +
Preference number: 5 (lower is better)
Translates to: THSLLFTKVEYGCSF*GKTPAAMVVFSRSR
Trigger: TCTCGAGCGGGAAAAGACTACCATGGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATATTCTACCTTGGTGAATAACAGCGAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS GCA 90 bp TACACAGAGGAGCTGTCCTCTGGTTTGTATGGAATTGGGTCGCTTTaGCCGCACAAATATAATTGCTTGGTCAGCAGTCATTCTCGTTGC +
Preference number: 5 (lower is better)
Translates to: YTEELSSGLYGIGSL*PHKYNCLVSSHSRC
Trigger: GCAACGAGAATGACTGCTGACCAAGCAATTATATTTGTGCGGGCAAAGCGACCCAATTCCATACAAACCAGAGGACAGCTCCTCTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTGCTGGGTTCTCATACTaGCAAGCTCTACCGCCACAC +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVAGFSY*QALPPH
Trigger: GTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAGC...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACTGTGAAGCCACTTTCTaGTTCCAGAGGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNCEATF*FQRVPT
Trigger: TGTGGGAACCCTCTGGAACAAGAAAGTGGCTTCACA...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGAGCTGTCCTCTGGTTaGTATGGAATTGGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMELSSG*YGIGSL
Trigger: AAGCGACCCAATTCCATACAAACCAGAGGACAGCTC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGGTGACCCATTATCTTaGAGTCCTTCCAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTGDPLS*SPSRPP
Trigger: TGGAGGCCTGGAAGGACTCAAAGATAATGGGTCACC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAACCAAGAACTGTGCTTaGGGACTGGAGCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQATKNCA*GLEPQS
Trigger: GGACTGTGGCTCCAGTCCCAAAGCACAGTTCTTGGT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAAATTTGCTAGGGCTTaGGCCGCCAGTATTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVKFARA*AASILL
Trigger: AAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATTT...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCAGATTCATTTAAATTaGCTAGGGCTTTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVQIHLN*LGLWPP
Trigger: TGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTATAAGGCTTGGTGTGTaGAGAACTGCTCCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTIRLGV*RTAPAS
Trigger: GGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTAT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAACAGTGGCCCAGTTTaGACTTCCTCCAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTNSGPV*TSSSSK
Trigger: CTTGGAGCTGGAGGAAGTCAAAACTGGGCCACTGTT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 90 bp TGTAATGCAGAGTGTGAAGCTGCTTCAGACAGATCTTTACTGTCCTaGGTTTCATGTTCAACCAAGAACTGTGCTTTGGGACTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: CNAECEAASDRSLLS*VSCSTKNCALGLEP
Trigger: TGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAACATGAAACCCAGGACAGTAAAGATCTGTCTGAAGCAGCTTCACACTCTGCATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAACGCTCCCCTACTTTaGTGTACTTTGGTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNNAPLL*CTLVLD
Trigger: GTCCAACACCAAAGTACACAAAAGTAGGGGAGCGTT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTGTGAAGCCACTTTCTaGTTCCAGAGGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTCEATF*FQRVPT
Trigger: TGTGGGAACCCTCTGGAACAAGAAAGTGGCTTCACA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTCTGGTTTGTATGGAATaGGGTCGCTTTGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVLVCME*GRFART
Trigger: TGTGCGGGCAAAGCGACCCAATTCCATACAAACCAG...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCTCAAACTGTTGCTCATaGGAGAAAATCATGCCTCGA +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVSNCCS*EKIMPR
Trigger: TCGAGGCATGATTTTCTCCAATGAGCAACAGTTTGA...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCAGATGAGTCAGGGGTaGAAGGCACTCAACATTCCG +
Preference number: 5 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTQMSQG*KALNIP
Trigger: CGGAATGTTGAGTGCCTTCAACCCCTGACTCATCTG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCGAACCAAGGCTTCCTaGTGTAAGTCTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTRTKAS*CKSGSG
Trigger: TCCAGAACCAGACTTACACAAGGAAGCCTTGGTTCG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCCAGGCCTCCAAACTTaGACTGACTCCAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMPGLQT*TDSRKK
Trigger: TTTCTTTCTGGAGTCAGTCAAAGTTTGGAGGCCTGG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGATGTCCACATCCTCTTaGGTGATTACAGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMMSTSS*VITGSF
Trigger: GAAGGAGCCTGTAATCACCAAAGAGGATGTGGACAT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACCACATCCACGGGAATaGTCTGCAGGTTCACTATGC +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAPHPRE*SAGSLC
Trigger: GCATAGTGAACCTGCAGACAATTCCCGTGGATGTGG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTATAAGGCTTGGTGTGTaGAGAACTGCTCCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVIRLGV*RTAPAS
Trigger: GGAGGCAGGAGCAGTTCTCAACACACCAAGCCTTAT...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAAACAGTGGCCCAGTTTaGACTTCCTCCAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQANSGPV*TSSSSK
Trigger: CTTGGAGCTGGAGGAAGTCAAAACTGGGCCACTGTT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACGCCAAATATAAAGCCTaGAGGCAAGTGGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNAKYKA*RQVGLW
Trigger: CCATAGACCCACTTGCCTCAAGGCTTTATATTTGGC...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTTATCCTCTCTGTGGCTaGGCCTCTGGTATCTACGTA +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTYPLCG*ASGIYV
Trigger: TACGTAGATACCAGAGGCCAAGCCACAGAGAGGATA...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACCAAGGTAGAATATGGTaGTTCATTCTGAGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYQGRIW*FILRQD
Trigger: GTCTTGCCTCAGAATGAACAACCATATTCTACCTTG...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS CCA 90 bp AGTGGGACAGAGACTGTAATACATGTCTTATCTCTAACTCTCAAATaGCACCCAGCAGGGAGCTTCCTCACCAATACATATAATGGGGCT +
Preference number: 5 (lower is better)
Translates to: SGTETVIHVLSLTLK*HPAGSFLTNTYNGA
Trigger: AGCCCCATTATATGTATTGGTGAGGAAGCTCCCTGCTGGGTGCCATTTGAGAGTTAGAGATAAGACATGTATTACAGTCTCTGTCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTAACGCTCCCCTACTTTaGTGTACTTTGGTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTNAPLL*CTLVLD
Trigger: GTCCAACACCAAAGTACACAAAAGTAGGGGAGCGTT...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACAAGAGGGTCAAACTGTaGCTCATTGGAGAAAATCAT +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYKRVKL*LIGENH
Trigger: ATGATTTTCTCCAATGAGCAACAGTTTGACCCTCTT...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCCAGGCCTCCAAACTTaGACTGACTCCAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTPGLQT*TDSRKK
Trigger: TTTCTTTCTGGAGTCAGTCAAAGTTTGGAGGCCTGG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGATCCTTATGGACATTaGCAAAGCTGGGTGAAACTG +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMDPYGH*QSWVKL
Trigger: CAGTTTCACCCAGCTTTGCAAATGTCCATAAGGATC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACCGCCAGTATTCTTCTaGCCTCAGCACTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAPPVFF*PQHSIQ
Trigger: CTGAATTGAGTGCTGAGGCAAGAAGAATACTGGCGG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCCGCCAGTATTCTTCTaGCCTCAGCACTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTPPVFF*PQHSIQ
Trigger: CTGAATTGAGTGCTGAGGCAAGAAGAATACTGGCGG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTCCGCCAGTATTCTTCTaGCCTCAGCACTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVPPVFF*PQHSIQ
Trigger: CTGAATTGAGTGCTGAGGCAAGAAGAATACTGGCGG...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCAGATTCATTTAAATTaGCTAGGGCTTTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMQIHLN*LGLWPP
Trigger: TGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACCAGATTCATTTAAATTaGCTAGGGCTTTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNQIHLN*LGLWPP
Trigger: TGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTG...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp CAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTGCCCAAATGAGGCCTACGGGTGTTGTAAACTGTaGGTCCATTTTCAGAATCAA +
Preference number: 5 (lower is better)
Translates to: QIANSPKDLWVTCPNEAYGCCKL*VHFQNQ
Trigger: TTGATTCTGAAAATGGACCAACAGTTTACAACACCC...GTAGGCCTCATTTGGGCAAGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGCCAAATATAAAGCCTaGAGGCAAGTGGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTAKYKA*RQVGLW
Trigger: CCATAGACCCACTTGCCTCAAGGCTTTATATTTGGC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTATCCTCTCTGTGGCTaGGCCTCTGGTATCTACGTA +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVYPLCG*ASGIYV
Trigger: TACGTAGATACCAGAGGCCAAGCCACAGAGAGGATA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp AACCATGAAGCAGATGACGCTGGCGAATTAGATATTGAGGTAAGGTaGCAGCATGTGCTTTGGGATCACAGCAAGAGAATATATTGCGGA +
Preference number: 5 (lower is better)
Translates to: NHEADDAGELDIEVR*QHVLWDHSKRIYCG
Trigger: TCCGCAATATATTCTCTTGCTGTGATCCCAAAGCACATGCTGTCACCTTACCTCAATATCTAATTCGCCAGCGTCATCTGCTTCATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 90 bp TTTCATGTTTGCAACACACTCGCTGTTATTCACCAAGGTAGAATATaGTTGTTCATTCTGAGGCAAGACTCCTGCAGCCATGGTAGTCTG +
Preference number: 5 (lower is better)
Translates to: FHVCNTLAVIHQGRI*LFILRQDSCSHGSL
Trigger: CAGACTACCATGGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATATTCTACCTTGGTGAATAACAGCGAGTGTGTTGCAAACATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650567.1
CDS-3UTR CAA 90 bp GGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCCTACTTTTGTGTACTTaGGTGTTGGACGTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: GSHPSYMKPVRANATCMVLLLCT*VLDVLN
Trigger: ATTTAGAACGTCCAACACCAAAGTACACAAAAGTAG...GACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCCAGGGCGCTGGAGGTaGATTATTGTTTTTATGCCA +
Preference number: 5 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTPGRWR*IIVFMP
Trigger: TGGCATAAAAACAATAATCAACCTCCAGCGCCCTGG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCAGCAGTCATTCTCGTaGCAAAAACTAAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMQQSFS*QKLSNR
Trigger: CCTGTTACTTAGTTTTTGCAACGAGAATGACTGCTG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAAAATCATGCCTCGATaGTCAAAATCTGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNKIMPR*SKSAAT
Trigger: AGTGGCAGCAGATTTTGACAATCGAGGCATGATTTT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTGATCCTTATGGACATTaGCAAAGCTGGGTGAAACTG +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTDPYGH*QSWVKL
Trigger: CAGTTTCACCCAGCTTTGCAAATGTCCATAAGGATC...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCAGATTCATTTAAATTaGCTAGGGCTTTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTQIHLN*LGLWPP
Trigger: TGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAATGTCCACATCCTCTTaGGTGATTACAGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAMSTSS*VITGSF
Trigger: GAAGGAGCCTGTAATCACCAAAGAGGATGTGGACAT...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTGCCAAATATAAAGCCTaGAGGCAAGTGGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTAKYKA*RQVGLW
Trigger: CCATAGACCCACTTGCCTCAAGGCTTTATATTTGGC...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCAAGGTAGAATATGGTaGTTCATTCTGAGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMQGRIW*FILRQD
Trigger: GTCTTGCCTCAGAATGAACAACCATATTCTACCTTG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS TCA 90 bp TTGGGATCACAGCAAGAGAATATATTGCGGAGAGGAGTTAGAAACTaGGTAAATTCCCTTACACAGAGGAGCTGTCCTCTGGTTTGTATG +
Preference number: 5 (lower is better)
Translates to: LGSQQENILRRGVRN*VNSLTQRSCPLVCM
Trigger: CATACAAACCAGAGGACAGCTCCTCTGTGTAAGGGAATTTACTCAGTTTCTAACTCCTCTCCGCAATATATTCTCTTGCTGTGATCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 90 bp TTTCATGTTTGCAACACACTCGCTGTTATTCACCAAGGTAGAATATaGTTGTTCATTCTGAGGCAAGACTCCTGCAGCCATGGTAGTCTT +
Preference number: 5 (lower is better)
Translates to: FHVCNTLAVIHQGRI*LFILRQDSCSHGSL
Trigger: AAGACTACCATGGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATATTCTACCTTGGTGAATAACAGCGAGTGTGTTGCAAACATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS-3UTR CAA 90 bp GAAAATAAGACATTTCAGGGATGGGCAACCCACTCCATTAACATCCACTGGACTCAGCAAGAGAATATATaGCGGAGAGGAGTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: ENKTFQGWATHSINIHWTQQENI*RRGVRN
Trigger: GTTTCTAACTCCTCTCCGCAATATATTCTCTTGCTG...AGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGAAATGTCTTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGTCAACAAGAGGGTCAAACTGTaGCTCATTGGAGAAAATCAT +
Preference number: 5 (lower is better)
Translates to: SHPSYMKPVRANATCMVNKRVKL*LIGENH
Trigger: ATGATTTTCTCCAATGAGCAACAGTTTGACCCTCTT...GTTGACCATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTGATCCTTATGGACATTaGCAAAGCTGGGTGAAACTG +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVDPYGH*QSWVKL
Trigger: CAGTTTCACCCAGCTTTGCAAATGTCCATAAGGATC...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCAGATCCTTATGGACATTaGCAAAGCTGGGTGAAACTG +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQADPYGH*QSWVKL
Trigger: CAGTTTCACCCAGCTTTGCAAATGTCCATAAGGATC...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGGGGTGTTGTAAACTGTaGGTCCATTTTCAGAATCAA +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMGCCKL*VHFQNQ
Trigger: TTGATTCTGAAAATGGACCAACAGTTTACAACACCC...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGCTACTTTTGTGTACTTaGGTGTTGGACGTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMLLLCT*VLDVLN
Trigger: ATTTAGAACGTCCAACACCAAAGTACACAAAAGTAG...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTCAGCAGTCATTCTCGTaGCAAAAACTAAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTQQSFS*QKLSNR
Trigger: CCTGTTACTTAGTTTTTGCAACGAGAATGACTGCTG...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACAGCAGTCATTCTCGTaGCAAAAACTAAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQAQQSFS*QKLSNR
Trigger: CCTGTTACTTAGTTTTTGCAACGAGAATGACTGCTG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTTCAAACTGTTGCTCATaGGAGAAAATCATGCCTCGA +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVSNCCS*EKIMPR
Trigger: TCGAGGCATGATTTTCTCCAATGAGCAACAGTTTGA...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp TTAGGCAGTCACCCTTCTTACATGAAGCCAGTTAGGGCTAATGCAACCTGTATGAACAGCTTAAGACACTaGGTGACTTTCTTAGTTCAT +
Preference number: 5 (lower is better)
Translates to: LGSHPSYMKPVRANATCMNSLRH*VTFLVH
Trigger: ATGAACTAAGAAAGTCACCAAGTGTCTTAAGCTGTT...CATACAGGTTGCATTAGCCCTAACTGGCTTCATGTAAGAAGGGTGACTGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp CTGACACTAATCAAAAATGCTCTTAGCAAAATGACTATCTTATCATaGTGTTTCCTGAGGCTCTCCAGGGAGGTTAGCCAAGAATCTTGG +
Preference number: 5 (lower is better)
Translates to: LTLIKNALSKMTILS*CFLRLSREVSQESW
Trigger: CCAAGATTCTTGGCTAACCTCCCTGGAGAGCCTCAGGAAACATCATGATAAGATAGTCATTTTGCTAAGAGCATTTTTGATTAGTGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS CCA 90 bp TTAGTTCCTCCTTTTCTACAGATTCATTTAAATTTGCTAGGGCTTTaGCCGCCAGTATTCTTCTTGCCTCAGCACTCAATTCAGACTGTA +
Preference number: 5 (lower is better)
Translates to: LVPPFLQIHLNLLGL*PPVFFLPQHSIQTV
Trigger: TACAGTCTGAATTGAGTGCTGAGGCAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTGTAGAAAAGGAGGAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp ACACTTGGTGACTTTCTTAGTTCATCTGTGGGGGAATGGATACACAATGAGGTTAAGAGGGTCAAACTGTaGCTCATTGGAGAAAATCAT +
Preference number: 5 (lower is better)
Translates to: TLGDFLSSSVGEWIHNEVKRVKL*LIGENH
Trigger: ATGATTTTCTCCAATGAGCAACAGTTTGACCCTCTT...AACCTCATTGTGTATCCATTCCCCCACAGATGAACTAAGAAAGTCACCAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 90 bp ATGCCACAAGGGCCCTCTGGTACTGGGCTTCTCTTTATTATCTTATaGATACACCAATACTTTGTTATTCACAGTCCTTCATATCCCATA +
Preference number: 5 (lower is better)
Translates to: MPQGPSGTGLLFIIL*IHQYFVIHSPSYPI
Trigger: TATGGGATATGAAGGACTGTGAATAACAAAGTATTGGTGTATTCATAAGATAATAAAGAGAAGCCCAGTACCAGAGGGCCCTTGTGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS CCA 90 bp CAGAGTCTGTGCTGTTTCTATTATGCCACAAGGGCCCTCTGGTACTaGGCTTCTCTTTATTATCTTATGAATACACCAATACTTTGTTAT +
Preference number: 5 (lower is better)
Translates to: QSLCCFYYATRALWY*ASLYYLMNTPILCY
Trigger: ATAACAAAGTATTGGTGTATTCATAAGATAATAAAGAGAAGCCCAGTACCAGAGGGCCCTTGTGGCATAATAGAAACAGCACAGACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCACTACTTTTGTGTACTTaGGTGTTGGACGTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQALLLCT*VLDVLN
Trigger: ATTTAGAACGTCCAACACCAAAGTACACAAAAGTAG...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp GCTGGCAAGGTTGTTTGGAAATCTGACAAAGAGCAAGTCTACTTTCTACAAGCATTGTGTACTTTGGTGTaGGACGTTCTAAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: AGKVVWKSDKEQVYFLQALCTLV*DVLNFL
Trigger: AAGGAAATTTAGAACGTCCAACACCAAAGTACACAA...TGCTTGTAGAAAGTAGACTTGCTCTTTGTCAGATTTCCAAACAACCTTGCCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS-3UTR CAA 90 bp AACAAGTATTTCAACAGGCAAATAGCAAACTCGCCAAAAGACCTGTGGGTCACTTTGTGTACTTTGGTGTaGGACGTTCTAAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: NKYFNRQIANSPKDLWVTLCTLV*DVLNFL
Trigger: AAGGAAATTTAGAACGTCCAACACCAAAGTACACAA...AGTGACCCACAGGTCTTTTGGCGAGTTTGCTATTTGCCTGTTGAAATACTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp CGGCCGGCCCGGAGACGCTGCCCCGCGGAGGGTCTGTaGGTAGCGGGCCCGAGGGCAGCCTCTGCGCACCCT +
Preference number: 6 (lower is better)
Translates to: RPARRRCPAEGL*VAGPRAASAHP
Trigger: AGGGTGCGCAGAGGCTGCCCTCGGGCCCGCTACCCACAGACCCTCCGCGGGGCAGCGTCTCCGGGCCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS GCA 72 bp CTCTGCGCACCCTCACGGCGCGGCACCGATCCCTGCTaGTCCCGACGCGCCCTGGAGGCAGAGGGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: LCAPSRRGTDPC*SRRALEAEGSQ
Trigger: CTGGGACCCCTCTGCCTCCAGGGCGCGTCGGGAGCAGCAGGGATCGGTGCCGCGCCGTGAGGGTGCGCAGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS GCA 72 bp GGAGGGTCTGTGGGTAGCGGGCCCGAGGGCAGCCTCTaGGCACCCTCACGGCGCGGCACCGATCCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GGSVGSGPEGSL*APSRRGTDPCC
Trigger: GCAGCAGGGATCGGTGCCGCGCCGTGAGGGTGCGCAGAGGCTGCCCTCGGGCCCGCTACCCACAGACCCTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS GCA 72 bp GGTCAGCAGGACGCGCCGTCCGTGTCACAAGTCGTCTaGGGTCGGCGGACCAGGGCGCGGCCGGCCCGGAGA +
Preference number: 6 (lower is better)
Translates to: GQQDAPSVSQVV*GRRTRARPARR
Trigger: TCTCCGGGCCGGCCGCGCCCTGGTCCGCCGACCGCAGACGACTTGTGACACGGACGGCGCGTCCTGCTGACC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS TCA 72 bp GCCCCGCCGGGCCTGCTGCAGCCGCAGTACTGGGTCTaGGGTGGAGTGCCGGCGGCCCTGGAGAAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: APPGLLQPQYWV*GGVPAALEKGA
Trigger: AGCTCCTTTCTCCAGGGCCGCCGGCACTCCACCTCAGACCCAGTACTGCGGCTGCAGCAGGCCCGGCGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS CCA 72 bp TTTTCCCGCTCGAGATTCCAAGCCCTCGGCGCCGGCTaGGGTCAGCAGGACGCGCCGTCCGTGTCACAAGTC +
Preference number: 6 (lower is better)
Translates to: FSRSRFQALGAG*GQQDAPSVSQV
Trigger: GACTTGTGACACGGACGGCGCGTCCTGCTGACCCCAGCCGGCGCCGAGGGCTTGGAATCTCGAGCGGGAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS CCA 72 bp AGCTTCTGCTGCCTGGGCTTGTGGCCAACCAAGATCTaGGCAGGCACTGTCTGTGGAGTCTCCCCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: SFCCLGLWPTKI*AGTVCGVSPCS
Trigger: GGAGCAAGGGGAGACTCCACAGACAGTGCCTGCCCAGATCTTGGTTGGCCACAAGCCCAGGCAGCAGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp GCTCCTGCTCACTCCAGCGGGCTGGGTTCTCATACTTaGAAGCTCTACCGCCACACGCCATGGAACATGCCA +
Preference number: 6 (lower is better)
Translates to: APAHSSGLGSHT*KLYRHTPWNMP
Trigger: TGGCATGTTCCATGGCGTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAGCCCGCTGGAGTGAGCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp CCCCTTAATGGCTTGCTCCTGCTCACTCCAGCGGGCTaGGTTCTCATACTTGCAAGCTCTACCGCCACACGC +
Preference number: 6 (lower is better)
Translates to: PLNGLLLLTPAG*VLILASSTATR
Trigger: GCGTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp TGCTCCTGCTCACTCCAGCGGGCTGGGTTCTCATACTaGCAAGCTCTACCGCCACACGCCATGGAACATGCC +
Preference number: 6 (lower is better)
Translates to: CSCSLQRAGFSY*QALPPHAMEHA
Trigger: GGCATGTTCCATGGCGTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAGCCCGCTGGAGTGAGCAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 72 bp AGTCCAGAGGGCTTCGGGGTGTCCTGCTGTTCTGCCTaGCAGAGCCAGGGCTCCCAACACCATGAGTTTTAC +
Preference number: 6 (lower is better)
Translates to: SPEGFGVSCCSA*QSQGSQHHEFY
Trigger: GTAAAACTCATGGTGTTGGGAGCCCTGGCTCTGTCAGGCAGAACAGCAGGACACCCCGAAGCCCTCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp GCCAGCCTCCATGAAAGCCTCAGGAAGGTATGTGAAGCCACTTTCTaGTTCCAGAGGGTTCCCACAGCTAGCATGCTCACCAGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: ASLHESLRKVCEATF*FQRVPTASMLTRAL
Trigger: CAGCGCCCTGGTGAGCATGCTAGCTGTGGGAACCCTCTGGAACAAGAAAGTGGCTTCACATACCTTCCTGAGGCTTTCATGGAGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp GGGTTTCATGTTCAACCAAGAACTGTGCTTTGGGACTaGAGCCACAGTCCAGAGGGCTTCGGGGTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: GFHVQPRTVLWD*SHSPEGFGVSC
Trigger: GCAGGACACCCCGAAGCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAACATGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp TTAATGGCTTGCTCCTGCTCACTCCAGCGGGCTGGGTTCTCATACTaGCAAGCTCTACCGCCACACGCCATGGAACATGCCATGTGTCCA +
Preference number: 6 (lower is better)
Translates to: LMACSCSLQRAGFSY*QALPPHAMEHAMCP
Trigger: TGGACACATGGCATGTTCCATGGCGTGTGGCGGTAGAGCTTGCAAGTATGAGAACCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 72 bp TTCGGGGAAAGTTGGGTTTCCCTCTGCATGGCTGACTaGGGAAACAGCCACCATCACCTGGAGAGAGGACGA +
Preference number: 6 (lower is better)
Translates to: FGESWVSLCMAD*GNSHHHLERGR
Trigger: TCGTCCTCTCTCCAGGTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCCAACTTTCCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS GCA 72 bp AAGATCTGGGCAGGCACTGTCTGTGGAGTCTCCCCTTaGTCCAGGAGGTTCTCGGCCCTCTTTAAATCTGAG +
Preference number: 6 (lower is better)
Translates to: KIWAGTVCGVSP*SRRFSALFKSE
Trigger: CTCAGATTTAAAGAGGGCCGAGAACCTCCTGGAGCAAGGGGAGACTCCACAGACAGTGCCTGCCCAGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp CTGTCCTGGGTTTCATGTTCAACCAAGAACTGTGCTTaGGGACTGGAGCCACAGTCCAGAGGGCTTCGGGGT +
Preference number: 6 (lower is better)
Translates to: LSWVSCSTKNCA*GLEPQSRGLRG
Trigger: ACCCCGAAGCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAACATGAAACCCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp AGTGAGACACTTGCTGGTGAGCAGGGTTTGGATCCTTATGGACATTaGCAAAGCTGGGTGAAACTGGCTCCCCAGGGCTGTGTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: SETLAGEQGLDPYGH*QSWVKLAPQGCVSL
Trigger: CAGGCTCACACAGCCCTGGGGAGCCAGTTTCACCCAGCTTTGCAAATGTCCATAAGGATCCAAACCCTGCTCACCAGCAAGTGTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 72 bp TTCTTTCGGGGAAAGTTGGGTTTCCCTCTGCATGGCTaGCTGAGGAAACAGCCACCATCACCTGGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: FFRGKLGFPLHG*LRKQPPSPGER
Trigger: CCTCTCTCCAGGTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS GCA 72 bp GCAGTGGGGTTAGGCGGGTTGGACACATCACTGTCATaGCTCAGTAACTCTTTATCCAGCTGCATGGTGACC +
Preference number: 6 (lower is better)
Translates to: AVGLGGLDTSLS*LSNSLSSCMVT
Trigger: GGTCACCATGCAGCTGGATAAAGAGTTACTGAGGCATGACAGTGATGTGTCCAACCCGCCTAACCCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp GAGAGGGAGGTGCACCATTTGACACTGCATGATTCTTaGGCTGCCCACAAGAGTGAAAGACTCAGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: EREVHHLTLHDS*AAHKSERLRLQ
Trigger: CTGGAGCCTGAGTCTTTCACTCTTGTGGGCAGCGCAAGAATCATGCAGTGTCAAATGGTGCACCTCCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS CAA 72 bp CTTGCTGGTGAGCAGGGTTTGGATCCTTATGGACATTaGCAAAGCTGGGTGAAACTGGCTCCCCAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: LAGEQGLDPYGH*QSWVKLAPQGC
Trigger: ACAGCCCTGGGGAGCCAGTTTCACCCAGCTTTGCAAATGTCCATAAGGATCCAAACCCTGCTCACCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp AGATCTTTACTGTCCTGGGTTTCATGTTCAACCAAGAACTGTGCTTaGGGACTGGAGCCACAGTCCAGAGGGCTTCGGGGTGTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RSLLSWVSCSTKNCA*GLEPQSRGLRGVLL
Trigger: CAGCAGGACACCCCGAAGCCCTCTGGACTGTGGCTCCAGTCCCAAAGCACAGTTCTTGGTTGAACATGAAACCCAGGACAGTAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp TCTGCGGCATCTGCTCGCCTGTCAACCAACATGTCCACATCCTCTTaGGTGATTACAGGCTCCTTCAGTTGCTCCACCCAAGACCACATC +
Preference number: 6 (lower is better)
Translates to: SAASARLSTNMSTSS*VITGSFSCSTQDHI
Trigger: GATGTGGTCTTGGGTGGAGCAACTGAAGGAGCCTGTAATCACCAAAGAGGATGTGGACATGTTGGTTGACAGGCGAGCAGATGCCGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp GACAGACAGAGACAGAGACAGGGAGAGGAGAGGGAGGTGCACCATTaGACACTGCATGATTCTTGCGCTGCCCACAAGAGTGAAAGACTC +
Preference number: 6 (lower is better)
Translates to: DRQRQRQGEEREVHH*TLHDSCAAHKSERL
Trigger: GAGTCTTTCACTCTTGTGGGCAGCGCAAGAATCATGCAGTGTCAAATGGTGCACCTCCCTCTCCTCTCCCTGTCTCTGTCTCTGTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS TCA 72 bp CGCCACACGCCATGGAACATGCCATGTGTCCAGGAATaGCATGCCGTAAACGCTCCCCTACTTTTGTGTACT +
Preference number: 6 (lower is better)
Translates to: RHTPWNMPCVQE*HAVNAPLLLCT
Trigger: AGTACACAAAAGTAGGGGAGCGTTTACGGCATGTCATTCCTGGACACATGGCATGTTCCATGGCGTGTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 72 bp GGTTCTCGGCCCTCTTTAAATCTGAGTCACTGTAGCTaGGCCGCCTTTTCAGATGAGTCAGGGGTTGAAGGC +
Preference number: 6 (lower is better)
Translates to: GSRPSLNLSHCS*AAFSDESGVEG
Trigger: GCCTTCAACCCCTGACTCATCTGAAAAGGCGGCTCAGCTACAGTGACTCAGATTTAAAGAGGGCCGAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp AGAGGGTTCCCACAGCTAGCATGCTCACCAGGGCGCTaGAGGTTGATTATTGTTTTTATGCCATGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: RGFPQLACSPGR*RLIIVFMPWLR
Trigger: CCTCAGCCATGGCATAAAAACAATAATCAACCTCCAGCGCCCTGGTGAGCATGCTAGCTGTGGGAACCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp CCTCGATTGTCAAAATCTGCTGCCACTGCAGTGGGGTTAGGCGGGTaGGACACATCACTGTCATGCCTCAGTAACTCTTTATCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: PRLSKSAATAVGLGG*DTSLSCLSNSLSSC
Trigger: GCAGCTGGATAAAGAGTTACTGAGGCATGACAGTGATGTGTCCAACCCGCCTAACCCCACTGCAGTGGCAGCAGATTTTGACAATCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 72 bp GTTGCTCCACCCAAGACCACATCAAGCTGCATAGGATaGAAGGGTCCCTCTCGCCACATATTCTTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: VAPPKTTSSCIG*KGPSRHIFFPK
Trigger: CTTGGGAAAGAATATGTGGCGAGAGGGACCCTTTCATCCTATGCAGCTTGATGTGGTCTTGGGTGGAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp ACATCCACGGGAATTGTCTGCAGGTTCACTATGCAGTaGAACACGCAGAGAATAGTCTGGTGCTGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: TSTGIVCRFTMQ*NTQRIVWCCPF
Trigger: GAAGGGACAGCACCAGACTATTCTCTGCGTGTTGCACTGCATAGTGAACCTGCAGACAATTCCCGTGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp CTTTTTCTTTCGGGGAAAGTTGGGTTTCCCTCTGCATaGCTGACTGAGGAAACAGCCACCATCACCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LFLSGKVGFPSA*LTEETATITWR
Trigger: TCTCCAGGTGATGGTGGCTGTTTCCTCAGTCAGCCATGCAGAGGGAAACCCAACTTTCCCCGAAAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288976.3
ENST00000620992.5
CDS CAA 72 bp CATGAAAGCCTCAGGAAGGTATGTGAAGCCACTTTCTaGTTCCAGAGGGTTCCCACAGCTAGCATGCTCACC +
Preference number: 6 (lower is better)
Translates to: HESLRKVCEATF*FQRVPTASMLT
Trigger: GGTGAGCATGCTAGCTGTGGGAACCCTCTGGAACAAGAAAGTGGCTTCACATACCTTCCTGAGGCTTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp TCTGCTCGCCTGTCAACCAACATGTCCACATCCTCTTaGGTGATTACAGGCTCCTTCAGTTGCTCCACCCAA +
Preference number: 6 (lower is better)
Translates to: SARLSTNMSTSS*VITGSFSCSTQ
Trigger: TTGGGTGGAGCAACTGAAGGAGCCTGTAATCACCAAAGAGGATGTGGACATGTTGGTTGACAGGCGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp GCCAGGGCTCCCAACACCATGAGTTTTACACTGACAGTGAGACACTaGCTGGTGAGCAGGGTTTGGATCCTTATGGACATTTGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: ARAPNTMSFTLTVRH*LVSRVWILMDICKA
Trigger: AGCTTTGCAAATGTCCATAAGGATCCAAACCCTGCTCACCAGCAAGTGTCTCACTGTCAGTGTAAAACTCATGGTGTTGGGAGCCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp CACGCCATGGAACATGCCATGTGTCCAGGAATGACATaGCGTAAACGCTCCCCTACTTTTGTGTACTTTGGT +
Preference number: 6 (lower is better)
Translates to: HAMEHAMCPGMT*RKRSPTFVYFG
Trigger: ACCAAAGTACACAAAAGTAGGGGAGCGTTTACGGCATGTCATTCCTGGACACATGGCATGTTCCATGGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp CCACTTTCTTGTTCCAGAGGGTTCCCACAGCTAGCATaGTCACCAGGGCGCTGGAGGTTGATTATTGTTTTT +
Preference number: 6 (lower is better)
Translates to: PLSCSRGFPQLA*SPGRWRLIIVF
Trigger: AAAAACAATAATCAACCTCCAGCGCCCTGGTGAGCATGCTAGCTGTGGGAACCCTCTGGAACAAGAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp TCCACATCCTCTTTGGTGATTACAGGCTCCTTCAGTTaGTCCACCCAAGACCACATCAAGCTGCATAGGATG +
Preference number: 6 (lower is better)
Translates to: STSSLVITGSFS*STQDHIKLHRM
Trigger: CATCCTATGCAGCTTGATGTGGTCTTGGGTGGAGCAACTGAAGGAGCCTGTAATCACCAAAGAGGATGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp GCAAGGAAAGCTTCCTCCACATCCACGGGAATTGTCTaGAGGTTCACTATGCAGTGCAACACGCAGAGAATA +
Preference number: 6 (lower is better)
Translates to: ARKASSTSTGIV*RFTMQCNTQRI
Trigger: TATTCTCTGCGTGTTGCACTGCATAGTGAACCTGCAGACAATTCCCGTGGATGTGGAGGAAGCTTTCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp TCAAAATCTGCTGCCACTGCAGTGGGGTTAGGCGGGTaGGACACATCACTGTCATGCCTCAGTAACTCTTTA +
Preference number: 6 (lower is better)
Translates to: SKSAATAVGLGG*DTSLSCLSNSL
Trigger: TAAAGAGTTACTGAGGCATGACAGTGATGTGTCCAACCCGCCTAACCCCACTGCAGTGGCAGCAGATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp CATGAGTTTTACACTGACAGTGAGACACTTGCTGGTGAGCAGGGTTaGGATCCTTATGGACATTTGCAAAGCTGGGTGAAACTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: HEFYTDSETLAGEQG*DPYGHLQSWVKLAP
Trigger: GGGAGCCAGTTTCACCCAGCTTTGCAAATGTCCATAAGGATCCAAACCCTGCTCACCAGCAAGTGTCTCACTGTCAGTGTAAAACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp GGTAGAATATGGTTGTTCATTCTGAGGCAAGACTCCTaGAGCCATGGTAGTCTTTTCCCGCTCGAGATTCCA +
Preference number: 6 (lower is better)
Translates to: GRIWLFILRQDS*SHGSLFPLEIP
Trigger: TGGAATCTCGAGCGGGAAAAGACTACCATGGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATATTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS CAA 90 bp GTAAATTCCCTTACACAGAGGAGCTGTCCTCTGGTTTGTATGGAATaGGGTCGCTTTGCCCGCACAAATATAATTGCTTGGTCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: VNSLTQRSCPLVCME*GRFARTNIIAWSAV
Trigger: GACTGCTGACCAAGCAATTATATTTGTGCGGGCAAAGCGACCCAATTCCATACAAACCAGAGGACAGCTCCTCTGTGTAAGGGAATTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 72 bp TTATCTTTGAGTCCTTCCAGGCCTCCAAACTTTGACTaGCTCCAGAAAGAAAGTGTGCTGCGAACCAAGGCT +
Preference number: 6 (lower is better)
Translates to: LSLSPSRPPNFD*LQKESVLRTKA
Trigger: AGCCTTGGTTCGCAGCACACTTTCTTTCTGGAGTCAGTCAAAGTTTGGAGGCCTGGAAGGACTCAAAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp GAGCTGTCCTCTGGTTTGTATGGAATTGGGTCGCTTTaGCCGCACAAATATAATTGCTTGGTCAGCAGTCAT +
Preference number: 6 (lower is better)
Translates to: ELSSGLYGIGSL*PHKYNCLVSSH
Trigger: ATGACTGCTGACCAAGCAATTATATTTGTGCGGGCAAAGCGACCCAATTCCATACAAACCAGAGGACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp TGTGAGCCTGAAACATCTGCAGAGAAAGCTCCACTCTaGTGTGCTTCCTTTGGAATGATCCTTCCATGGAAA +
Preference number: 6 (lower is better)
Translates to: CEPETSAEKAPL*CASFGMILPWK
Trigger: TTTCCATGGAAGGATCATTCCAAAGGAAGCACAGCAGAGTGGAGCTTTCTCTGCAGATGTTTCAGGCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp CTTACACAGAGGAGCTGTCCTCTGGTTTGTATGGAATaGGGTCGCTTTGCCCGCACAAATATAATTGCTTGG +
Preference number: 6 (lower is better)
Translates to: LTQRSCPLVCME*GRFARTNIIAW
Trigger: CCAAGCAATTATATTTGTGCGGGCAAAGCGACCCAATTCCATACAAACCAGAGGACAGCTCCTCTGTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp CCCAACACCATGAGTTTTACACTGACAGTGAGACACTaGCTGGTGAGCAGGGTTTGGATCCTTATGGACATT +
Preference number: 6 (lower is better)
Translates to: PNTMSFTLTVRH*LVSRVWILMDI
Trigger: AATGTCCATAAGGATCCAAACCCTGCTCACCAGCAAGTGTCTCACTGTCAGTGTAAAACTCATGGTGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp TCCTTCATCATCACTGGCCTGTTCTCCGCTAAGTCCAGCAGCAATTaGCAAACTAGGTGGATAATTTTTGGCACGTGTTTCAGAAGTCGT +
Preference number: 6 (lower is better)
Translates to: SFIITGLFSAKSSSN*QTRWIIFGTCFRSR
Trigger: ACGACTTCTGAAACACGTGCCAAAAATTATCCACCTAGTTTGCAAATTGCTGCTGGACTTAGCGGAGAACAGGCCAGTGATGATGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp CATGTTTGCAACACACTCGCTGTTATTCACCAAGGTAGAATATGGTaGTTCATTCTGAGGCAAGACTCCTGCAGCCATGGTAGTCTGATC +
Preference number: 6 (lower is better)
Translates to: HVCNTLAVIHQGRIW*FILRQDSCSHGSLI
Trigger: GATCAGACTACCATGGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATATTCTACCTTGGTGAATAACAGCGAGTGTGTTGCAAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650567.1
CDS TCA 72 bp GCAGATGACGCTGGCGAATTAGATATTGAGGTAAGGTaGCAGCATGTGCTTTGGGATCACAGCAAGAGAATA +
Preference number: 6 (lower is better)
Translates to: ADDAGELDIEVR*QHVLWDHSKRI
Trigger: TATTCTCTTGCTGTGATCCCAAAGCACATGCTGTCACCTTACCTCAATATCTAATTCGCCAGCGTCATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp AAAGAGGGTCAAACTGTTGCTCATTGGAGAAAATCATaGCTCGATTGTCAAAATCTGCTGCCACTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: KEGQTVAHWRKS*LDCQNLLPLQW
Trigger: CCACTGCAGTGGCAGCAGATTTTGACAATCGAGGCATGATTTTCTCCAATGAGCAACAGTTTGACCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp CTAGAAAATGGCAAAGGGGGTGTTCATACCCAGTTCTaGCTTACTCCAGAGTCTGTGCTGTTTCTATTATGC +
Preference number: 6 (lower is better)
Translates to: LENGKGGVHTQF*LTPESVLFLLC
Trigger: GCATAATAGAAACAGCACAGACTCTGGAGTAAGGCAGAACTGGGTATGAACACCCCCTTTGCCATTTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS CCA 72 bp TTCTCCGCTAAGTCCAGCAGCAATTTGCAAACTAGGTaGATAATTTTTGGCACGTGTTTCAGAAGTCGTGCC +
Preference number: 6 (lower is better)
Translates to: FSAKSSSNLQTR*IIFGTCFRSRA
Trigger: GGCACGACTTCTGAAACACGTGCCAAAAATTATCCACCTAGTTTGCAAATTGCTGCTGGACTTAGCGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp GAGTGTGAAGCTGCTTCAGACAGATCTTTACTGTCCTaGGTTTCATGTTCAACCAAGAACTGTGCTTTGGGA +
Preference number: 6 (lower is better)
Translates to: ECEAASDRSLLS*VSCSTKNCALG
Trigger: TCCCAAAGCACAGTTCTTGGTTGAACATGAAACCCAGGACAGTAAAGATCTGTCTGAAGCAGCTTCACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp AGTAAATTCCCTTACACAGAGGAGCTGTCCTCTGGTTaGTATGGAATTGGGTCGCTTTGCCCGCACAAATAT +
Preference number: 6 (lower is better)
Translates to: SKFPYTEELSSG*YGIGSLCPHKY
Trigger: ATATTTGTGCGGGCAAAGCGACCCAATTCCATACAAACCAGAGGACAGCTCCTCTGTGTAAGGGAATTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp AACACACTCGCTGTTATTCACCAAGGTAGAATATGGTaGTTCATTCTGAGGCAAGACTCCTGCAGCCATGGT +
Preference number: 6 (lower is better)
Translates to: NTLAVIHQGRIW*FILRQDSCSHG
Trigger: ACCATGGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATATTCTACCTTGGTGAATAACAGCGAGTGTGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS CAA 90 bp CAGATTCATTTAAATTTGCTAGGGCTTTGGCCGCCAGTATTCTTCTaGCCTCAGCACTCAATTCAGACTGTAATGCAGAGTGTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: QIHLNLLGLWPPVFF*PQHSIQTVMQSVKL
Trigger: CAGCTTCACACTCTGCATTACAGTCTGAATTGAGTGCTGAGGCAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp CATGTTTGCAACACACTCGCTGTTATTCACCAAGGTAGAATATGGTaGTTCATTCTGAGGCAAGACTCCTGCAGCCATGGTAGTCTTTTC +
Preference number: 6 (lower is better)
Translates to: HVCNTLAVIHQGRIW*FILRQDSCSHGSLF
Trigger: GAAAAGACTACCATGGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATATTCTACCTTGGTGAATAACAGCGAGTGTGTTGCAAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS TCA 72 bp CAGCAAGAGAATATATTGCGGAGAGGAGTTAGAAACTaGGTAAATTCCCTTACACAGAGGAGCTGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: QQENILRRGVRN*VNSLTQRSCPL
Trigger: CAGAGGACAGCTCCTCTGTGTAAGGGAATTTACTCAGTTTCTAACTCCTCTCCGCAATATATTCTCTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 72 bp TGCTTCCTTTGGAATGATCCTTCCATGGAAAATTGGTaGCCCATTATCTTTGAGTCCTTCCAGGCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: CFLWNDPSMENW*PIIFESFQASK
Trigger: TTTGGAGGCCTGGAAGGACTCAAAGATAATGGGTCACCAATTTTCCATGGAAGGATCATTCCAAAGGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS TCA 72 bp CTGTTATTCACCAAGGTAGAATATGGTTGTTCATTCTaGGGCAAGACTCCTGCAGCCATGGTAGTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: LLFTKVEYGCSF*GKTPAAMVVFS
Trigger: GGAAAAGACTACCATGGCTGCAGGAGTCTTGCCTCAGAATGAACAACCATATTCTACCTTGGTGAATAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375360.7
CDS CAA 72 bp TTAAATTTGCTAGGGCTTTGGCCGCCAGTATTCTTCTaGCCTCAGCACTCAATTCAGACTGTAATGCAGAGT +
Preference number: 6 (lower is better)
Translates to: LNLLGLWPPVFF*PQHSIQTVMQS
Trigger: ACTCTGCATTACAGTCTGAATTGAGTGCTGAGGCAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp GAATCAAAATTAACCTTAGTGAATGCCTTAATGGCATaGGCAAGGAAAGCTTCCTCCACATCCACGGGAATT +
Preference number: 6 (lower is better)
Translates to: ESKLTLVNALMA*ARKASSTSTGI
Trigger: AATTCCCGTGGATGTGGAGGAAGCTTTCCTTGCCCATGCCATTAAGGCATTCACTAAGGTTAATTTTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000467049.1
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp GAGACTGTAATACATGTCTTATCTCTAACTCTCAAATaGCACCCAGCAGGGAGCTTCCTCACCAATACATAT +
Preference number: 6 (lower is better)
Translates to: ETVIHVLSLTLK*HPAGSFLTNTY
Trigger: ATATGTATTGGTGAGGAAGCTCCCTGCTGGGTGCCATTTGAGAGTTAGAGATAAGACATGTATTACAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1
CDS CAA 72 bp CTCAACATTCCGCCTTTTCCAAAGAGGGTCAAACTGTaGCTCATTGGAGAAAATCATGCCTCGATTGTCAAA +
Preference number: 6 (lower is better)
Translates to: LNIPPFPKRVKL*LIGENHASIVK
Trigger: TTTGACAATCGAGGCATGATTTTCTCCAATGAGCAACAGTTTGACCCTCTTTGGAAAAGGCGGAATGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 72 bp GCCGTAAACGCTCCCCTACTTTTGTGTACTTTGGTGTaGGACGTTCTAAATTTCCTTTCATGTTTGCAACAC +
Preference number: 6 (lower is better)
Translates to: AVNAPLLLCTLV*DVLNFLSCLQH
Trigger: GTGTTGCAAACATGAAAGGAAATTTAGAACGTCCAACACCAAAGTACACAAAAGTAGGGGAGCGTTTACGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375360.7
ENST00000650567.1
CDS CAA 90 bp CTACCTTCCTTTTTAGTTCCTCCTTTTCTACAGATTCATTTAAATTaGCTAGGGCTTTGGCCGCCAGTATTCTTCTTGCCTCAGCACTCA +
Preference number: 6 (lower is better)
Translates to: LPSFLVPPFLQIHLN*LGLWPPVFFLPQHS
Trigger: TGAGTGCTGAGGCAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTGTAGAAAAGGAGGAACTAAAAAGGAAGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS GCA 72 bp TCAACATTCCGCCTTTTCCAAAGAGGGTCAAACTGTTaGTCATTGGAGAAAATCATGCCTCGATTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: STFRLFQRGSNC*SLEKIMPRLSK
Trigger: TTTTGACAATCGAGGCATGATTTTCTCCAATGAGCAACAGTTTGACCCTCTTTGGAAAAGGCGGAATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp CCTTTTCTACAGATTCATTTAAATTTGCTAGGGCTTTaGCCGCCAGTATTCTTCTTGCCTCAGCACTCAATT +
Preference number: 6 (lower is better)
Translates to: PFLQIHLNLLGL*PPVFFLPQHSI
Trigger: AATTGAGTGCTGAGGCAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTGTAGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CAA 90 bp TTTAGTTCCTCCTTTTCTACAGATTCATTTAAATTTGCTAGGGCTTaGGCCGCCAGTATTCTTCTTGCCTCAGCACTCAATTCAGACTGT +
Preference number: 6 (lower is better)
Translates to: FSSSFSTDSFKFARA*AASILLASALNSDC
Trigger: ACAGTCTGAATTGAGTGCTGAGGCAAGAAGAATACTGGCGGCCAAAGCCCTAGCAAATTTAAATGAATCTGTAGAAAAGGAGGAACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288976.3
ENST00000375360.7
ENST00000620992.5
ENST00000650567.1
CDS CCA 72 bp TCATTCACCTACCCAATATTTACTACATGCACACAGTaGGACAGAGACTGTAATACATGTCTTATCTCTAAC +
Preference number: 6 (lower is better)
Translates to: SFTYPIFTTCTQ*DRDCNTCLISN
Trigger: GTTAGAGATAAGACATGTATTACAGTCTCTGTCCCACTGTGTGCATGTAGTAAATATTGGGTAGGTGAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467049.1