Pregenerated sensors for PTOV1 (Homo sapiens)
Ensembl gene IDs: ENSG00000104960Ensembl transcript IDs: ENST00000391842.5, ENST00000594151.5, ENST00000594640.1, ENST00000595934.1, ENST00000596095.1, ENST00000596424.1, ENST00000597730.1, ENST00000597793.5, ENST00000598632.5, ENST00000600105.5, ENST00000601612.5, ENST00000602040.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGGCCTGGCCCCACCCAGGCCTGGATACCACCTCCCATGGCCCTaGGGCTGGGCTGCAGTTTCCCGACAGCCTAGGACCGCTGGGACT | + |
|
Preference number: 1 (lower is better) Translates to: RGLAPPRPGYHLPWP*GWAAVSRQPRTAGT Trigger: AGTCCCAGCGGTCCTAGGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCCTGGGTGGGGCCAGGCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| 3UTR GCA 90 bp | CCCGACAGCCTAGGACCGCTGGGACTGCTGCCTCTCCCTCTGCTCTaGTCTCCCCAAGGCCAAGGTCGCCCTGCTTCTTTCCCAACCCCA | + |
|
Preference number: 1 (lower is better) Translates to: PDSLGPLGLLPLPLL*SPQGQGRPASFPTP Trigger: TGGGGTTGGGAAAGAAGCAGGGCGACCTTGGCCTTGGGGAGAGCAGAGCAGAGGGAGAGGCAGCAGTCCCAGCGGTCCTAGGCTGTCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| 3UTR-3UTR GCA 90 bp | GCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCCAGGCCAAGGTCGCCCTaGTTCTTTCCCAACCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: AWIPPPMALRLGCSFPTARPRSP*FFPNPT Trigger: GGTGGGGTTGGGAAAGAAGCAGGGCGACCTTGGCCT...GGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| 3UTR-3UTR TCA 90 bp | GCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCCGGTCCCTCCTGTACATaGCAGGGTCACCACTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: AWIPPPMALRLGCSFPTAGPSCT*QGHHSP Trigger: TGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACC...GGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| 3UTR TCA 72 bp | GCCCCACCCAGGCCTGGATACCACCTCCCATGGCCCTaGGGCTGGGCTGCAGTTTCCCGACAGCCTAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: APPRPGYHLPWP*GWAAVSRQPRT Trigger: GGTCCTAGGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCCTGGGTGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| 3UTR GCA 72 bp | ATCCCTCGTTGCTGTTGCTCCTGCTCCAGGTTCCGCTaGAGGACCTGCTGCTGGTTGGCAATGACACGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: IPRCCCSCSRFR*RTCCWLAMTRR Trigger: CCGGCGTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601612.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCCCACCCAGGCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCCCCGAGCACCTTCCATaGGAGGGGCCGAGCGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGPTQAWIPPPMALRLGCPEHLP*EGPSGP Trigger: GGGCCCGCTCGGCCCCTCCCATGGAAGGTGCTCGGG...GCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCCTGGGTGGGGCCAGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGGCTGCAGTTTCCCGACAGCCTAGGACCGCTGGGACTGCTGCCTCTCCCTTGCGGCAGAGCCCCTTaGGCGAGTCGCAGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGLQFPDSLGPLGLLPLPCGRAP*ASRSLC Trigger: ACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCA...AGGGAGAGGCAGCAGTCCCAGCGGTCCTAGGCTGTCGGGAAACTGCAGCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCCAGGCTCCCAAGCACTaGCCCCACATCCCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLDTTSHGPEAGLQFPDSQAPKH*PHIPVS Trigger: GCTCACAGGGATGTGGGGTCAGTGCTTGGGAGCCTG...GCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCCCACCCAGGCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCGGTCCGCTTCAGCTTTaGAGTGGAGTCAGAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGPTQAWIPPPMALRLGCGPLQL*SGVRVG Trigger: CCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACC...GCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCCTGGGTGGGGCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCCCAGGTCCCACTGCCTaGTTGCGGGTGGTGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: GLDTTSHGPEAGLQFPDSPGPTA*LRVVMT Trigger: GGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGG...GCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCAGGCCAAGGTCGCCCTaGTTCTTTCCCAACCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLDTTSHGPEAGLQFPDSRPRSP*FFPNPT Trigger: GGTGGGGTTGGGAAAGAAGCAGGGCGACCTTGGCCT...GCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | CCACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTCTCGGGTGCAGTGGGGGCTaGTGGCCACAGGCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHAPGSLLYMTGSPLTSLGCSGG*WPQAPK Trigger: CTTGGGAGCCTGTGGCCAGCAGCCCCCACTGCACCC...GAGACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR CCA 90 bp | GCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCCTGCAGGACCTGCTGCTaGTTGGCAATGACACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AWIPPPMALRLGCSFPTACRTCC*LAMTRR Trigger: CCGGCGTGTCATTGCCAACCAGCAGCAGGTCCTGCA...GGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | CTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCCTATGTGGGGGAACAGCATaGAGCCCGCGAAGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDTTSHGPEAGLQFPDSLCGGTA*SPRSRC Trigger: GCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACA...TAGGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGGCTGCAGTTTCCCGACAGCCTAGGACCGCTGGGACTGCTGCCTCTCCCTATCCCTCGTTGCTGTTaGTCCTGCTCCAGGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLQFPDSLGPLGLLPLPIPRCC*SCSRFR Trigger: GCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGAT...AGGGAGAGGCAGCAGTCCCAGCGGTCCTAGGCTGTCGGGAAACTGCAGCCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR CCA 90 bp | CCACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTCTCCAGAAGCGTGTCACCTaGGGGCAGGGGTGCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHAPGSLLYMTGSPLTSLQKRVT*GQGCSG Trigger: CCCACTGCACCCCTGCCCCCAGGTGACACGCTTCTG...GAGACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | ACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTCTCTGGGTCTGCGCTTCTCCTaGCACTCGAGGACGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCPRVPPVHDRVTTHQSLGLRFS*HSRTPL Trigger: GAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACC...CAGAGACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | CTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCCTAACCACCAGGTCCCACTaGCTGCTTGCGGGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LDTTSHGPEAGLQFPDSLTTRSH*LLAGGD Trigger: ATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGT...TAGGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | CTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCCTACGCTGCAGGACCTGCTaGTGGTTGGCAATGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: LDTTSHGPEAGLQFPDSLRCRTC*WLAMTR Trigger: GCGTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCG...TAGGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGATACCACCTCCCATGGCCCTGAGGCTGGGCTGCAGTTTCCCGACAGCTTCCGCTGCAGGACCTaGTGCTGGTTGGCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLDTTSHGPEAGLQFPDSFRCRT*CWLAMT Trigger: TGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAA...GCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR CCA 90 bp | ACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTCTCTGTGCAGTGGGGGCTGCTaGCCACAGGCTCCCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCPRVPPVHDRVTTHQSLCSGGC*PQAPKH Trigger: GTGCTTGGGAGCCTGTGGCCAGCAGCCCCCACTGCA...CAGAGACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | CCACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTCTCCGTTGCTGTTGCTCCTaGTCCAGGTTCCGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHAPGSLLYMTGSPLTSLRCCCS*SRFRCR Trigger: CCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACG...GAGACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCTGCAGTTTCCCGACAGCCTAGGACCGCTGGGACTGCTGCCTCTCCCTTTGACAAAGTTGCCCTaGTCATGGGGGATGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLQFPDSLGPLGLLPLPLTKLP*SWGMRP Trigger: TGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAA...AGGGAGAGGCAGCAGTCCCAGCGGTCCTAGGCTGTCGGGAAACTGCAGCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR TCA 90 bp | ACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTCTCTGGGTCCCTCCTGTACATaGCAGGGTCACCACTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TCPRVPPVHDRVTTHQSLGPSCT*QGHHSP Trigger: TGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACC...CAGAGACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR GCA 90 bp | ACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTCTCTGAGTCAGAGTAGGGTCTaGGCTTCTCCTGCCACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TCPRVPPVHDRVTTHQSLSQSRV*ASPATR Trigger: TCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACT...CAGAGACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS GCA 90 bp | TCCGCTGGCTTCCCTGCCGCCGCGCCAAGACCCACCCTCCAGCCCTaGAGAGCCGCCCAGTGGCCGCTTTTCCATGGAGCCCTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAGFPAAAPRPTLQP*RAAQWPLFHGALVG Trigger: TCCCACCAGGGCTCCATGGAAAAGCGGCCACTGGGCGGCTCTGCAGGGCTGGAGGGTGGGTCTTGGCGCGGCGGCAGGGAAGCCAGCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS GCA 90 bp | CATGGAGCCCTGGTGGGAACCCGCCCGGCATCCTCCGGGCTCCCCTaGAGCTCCTTGCTCCAGCCATCGCATCACACTCCGCCCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: HGALVGTRPASSGLP*SSLLQPSHHTPPTP Trigger: TGGTGTGGGCGGAGTGTGATGCGATGGCTGGAGCAAGGAGCTGCAGGGGAGCCCGGAGGATGCCGGGCGGGTTCCCACCAGGGCTCCATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS TCA 90 bp | CTGCCATGGCTGAGGTCAGAGTGGCACCCGGCACCCAGGCTGCGGTaGGAATGCCAAGAAGGCACTACCTCCCACCCACATCACCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPWLRSEWHPAPRLR*ECQEGTTSHPHHPL Trigger: CAGGGGGTGATGTGGGTGGGAGGTAGTGCCTTCTTGGCATTCTCACCGCAGCCTGGGTGCCGGGTGCCACTCTGACCTCAGCCATGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000595934.1 ENST00000597793.5 |
||
| CDS GCA 90 bp | CAGTGGCCTGAGACAGGTCCCGGCCCTCACCTGGTGCACAGGACCTaGAGAGTCTGCCTCAACTGGCAAGGCATGACCAGGACACGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QWPETGPGPHLVHRT*RVCLNWQGMTRTRG Trigger: ACCACGTGTCCTGGTCATGCCTTGCCAGTTGAGGCAGACTCTGCAGGTCCTGTGCACCAGGTGAGGGCCGGGACCTGTCTCAGGCCACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS GCA 90 bp | TCCCTGCACTCACGCCCCCAGGGCCACCTCGAAGCTGGGCACAGATaGAGAAACTGGAGGCCTCTCAGGCTGAGTTCCTTCACCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHSRPQGHLEAGHR*RNWRPLRLSSFTLC Trigger: GCACAGGGTGAAGGAACTCAGCCTGAGAGGCCTCCAGTTTCTGCATCTGTGCCCAGCTTCGAGGTGGCCCTGGGGGCGTGAGTGCAGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000598632.5 |
||
| CDS-3UTR CAA 90 bp | GCTGGGCTGCAGTTTCCCGACAGCCTAGGACCGCTGGGACTGCTGCCTCTCCCTGGGTCCGCTTCAGCTTaGCAGTGGAGTCAGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLQFPDSLGPLGLLPLPGSASA*QWSQSR Trigger: CCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCC...AGGGAGAGGCAGCAGTCCCAGCGGTCCTAGGCTGTCGGGAAACTGCAGCCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS TCA 90 bp | ACCTGGTGCACAGGACCTGCAGAGTCTGCCTCAACTGGCAAGGCATaGCCAGGACACGTGGTTACCAGGCAGGGCCTTCCAGCCGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TWCTGPAESASTGKA*PGHVVTRQGLPAAG Trigger: TCCTGCGGCTGGAAGGCCCTGCCTGGTAACCACGTGTCCTGGTCATGCCTTGCCAGTTGAGGCAGACTCTGCAGGTCCTGTGCACCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS GCA 90 bp | GAGACAGGTCCCGGCCCTCACCTGGTGCACAGGACCTGCAGAGTCTaGCTCAACTGGCAAGGCATGACCAGGACACGTGGTTACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ETGPGPHLVHRTCRV*LNWQGMTRTRGYQA Trigger: TGCCTGGTAACCACGTGTCCTGGTCATGCCTTGCCAGTTGAGGCAGACTCTGCAGGTCCTGTGCACCAGGTGAGGGCCGGGACCTGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS-3UTR CAA 90 bp | CCCCCACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTAGGACCTGCTGCTGGTaGGCAATGACACGCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PPHAPGSLLYMTGSPLTSRTCCW*AMTRRM Trigger: CATCCGGCGTGTCATTGCCAACCAGCAGCAGGTCCT...ACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS-3UTR CAA 90 bp | CCCCCACATGCCCCAGGGTCCCTCCTGTACATGACAGGGTCACCACTCACCAGTCATCCCTCGTTGCTGTaGCTCCTGCTCCAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPHAPGSLLYMTGSPLTSHPSLL*LLLQVP Trigger: CGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATG...ACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000391842.5 |
||
| CDS TCA 90 bp | AAGAGCACAGGCAGCGCCCCACCGTTCTGCTGCCTCCTAGCTGTGTaGCCTAACACCAGCCACCTCCTGCTTCTGGGCCTCCATCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSTGSAPPFCCLLAV*PNTSHLLLLGLHHL Trigger: CAGATGATGGAGGCCCAGAAGCAGGAGGTGGCTGGTGTTAGGTCACACAGCTAGGAGGCAGCAGAACGGTGGGGCGCTGCCTGTGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595934.1 ENST00000597793.5 |
||
| CDS GCA 90 bp | GAGGCCTCTCAGGCTGAGTTCCTTCACCCTGTGCTCTACGGAGGGTaGCTGGAGTCAGTCATTTCCAGATGGGGTCCGAGAGGCCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: EASQAEFLHPVLYGG*LESVISRWGPRGHE Trigger: CTCGTGGCCTCTCGGACCCCATCTGGAAATGACTGACTCCAGGCACCCTCCGTAGAGCACAGGGTGAAGGAACTCAGCCTGAGAGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598632.5 ENST00000600105.5 |
||
| CDS GCA 90 bp | AGAATACCAAGCCCCAACGTGCCACTCCCTCCTGGCTGGCTCTTGTaGCTAGCACACCCATTTACCAGGTCCCTGCCATACGCTATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RIPSPNVPLPPGWLL*LAHPFTRSLPYAMC Trigger: ACACATAGCGTATGGCAGGGACCTGGTAAATGGGTGTGCTAGGCACAAGAGCCAGCCAGGAGGGAGTGGCACGTTGGGGCTTGGTATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598632.5 |
||
| CDS CCA 90 bp | CATTTTACAGACCAGAATACCAAGCCCCAACGTGCCACTCCCTCCTaGCTGGCTCTTGTGCCTAGCACACCCATTTACCAGGTCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HFTDQNTKPQRATPS*LALVPSTPIYQVPA Trigger: GGCAGGGACCTGGTAAATGGGTGTGCTAGGCACAAGAGCCAGCCAGGAGGGAGTGGCACGTTGGGGCTTGGTATTCTGGTCTGTAAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598632.5 |
||
| CDS GCA 90 bp | GCACACAGTTGGTGCCACATAAAGGCTCAACAGATAAAGTGCTGGTaGCTCTTGAGGATGGCGCATGGGAGAACTAAGCCTGACAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: AHSWCHIKAQQIKCW*LLRMAHGRTKPDRC Trigger: ACATCTGTCAGGCTTAGTTCTCCCATGCGCCATCCTCAAGAGGCACCAGCACTTTATCTGTTGAGCCTTTATGTGGCACCAACTGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS GCA 90 bp | GGGCCTCCATCATCTGTAAAACCGGGTAATAGTGCACACAGTTGGTaGCACATAAAGGCTCAACAGATAAAGTGCTGGTGCCTCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPPSSVKPGNSAHSW*HIKAQQIKCWCLLR Trigger: CCTCAAGAGGCACCAGCACTTTATCTGTTGAGCCTTTATGTGGCACCAACTGTGTGCACTATTACCCGGTTTTACAGATGATGGAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS CCA 72 bp | GGCGGTCCTGCGGGCCTCTCCGGCGCGGGGGAGTCCTaGGAAGACGCGCGAGCCACAACTTCAGGGGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGPAGLSGAGES*EDARATTSGGV Trigger: CACGCCCCCTGAAGTTGTGGCTCGCGCGTCTTCCCAGGACTCCCCCGCGCCGGAGAGGCCCGCAGGACCGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000594151.5 |
||
| CDS GCA 72 bp | AGAAAGGGCTGCCCTGATCCCCACGGCCACAGCCACTaGCCCTGCCACCGCCCTGGCTGCCACGCCCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RKGCPDPHGHSH*PCHRPGCHAPA Trigger: TGCCGGGGCGTGGCAGCCAGGGCGGTGGCAGGGGCAGTGGCTGTGGCCGTGGGGATCAGGGCAGCCCTTTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602040.5 |
||
| CDS TCA 72 bp | ACATGGTGCTCTGTTCCTCTCCCATGTCCGCCCCCGTaGGCGGTCCGGGCTCGCTCTGCCCTGGCCGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TWCSVPLPCPPP*AVRARSALAGP Trigger: GGGGCCGGCCAGGGCAGAGCGAGCCCGGACCGCTCACGGGGGCGGACATGGGAGAGGAACAGAGCACCATGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596424.1 |
||
| CDS CCA 72 bp | CCAGCCCTGCAGAGCCGCCCAGTGGCCGCTTTTCCATaGAGCCCTGGTGGGAACCCGCCCGGCATCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PALQSRPVAAFP*SPGGNPPGILR Trigger: CCGGAGGATGCCGGGCGGGTTCCCACCAGGGCTCCATGGAAAAGCGGCCACTGGGCGGCTCTGCAGGGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS GCA 72 bp | CTGGTGGGAACCCGCCCGGCATCCTCCGGGCTCCCCTaGAGCTCCTTGCTCCAGCCATCGCATCACACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVGTRPASSGLP*SSLLQPSHHTP Trigger: CGGAGTGTGATGCGATGGCTGGAGCAAGGAGCTGCAGGGGAGCCCGGAGGATGCCGGGCGGGTTCCCACCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS CCA 72 bp | AGCAGGCAGCGGGGGTGGAGGGAGACTGAGCAGCCCTaGAGGCCGGCCACCTCACCCCTCGTTGCTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRQRGWRETEQP*RPATSPLVAVA Trigger: AGCAACAGCAACGAGGGGTGAGGTGGCCGGCCTCCAGGGCTGCTCAGTCTCCCTCCACCCCCGCTGCCTGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597730.1 |
||
| CDS CCA 72 bp | CCCGCAGAACCAGGGTCAGTGCCCCATCCAGTGCCGTaGGGACAGCACAGAGCCCCCAGAAGTCACGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PAEPGSVPHPVP*GQHRAPRSHAH Trigger: GTGGGCGTGACTTCTGGGGGCTCTGTGCTGTCCCCACGGCACTGGATGGGGCACTGACCCTGGTTCTGCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596424.1 |
||
| CDS CCA 72 bp | GGCCCAGGGTGGTCTGGGGGCGACAGGACAGACAGCTaGGTCAGCCAGGCATGGGGGTGCTCAGAGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GPGWSGGDRTDS*VSQAWGCSEWM Trigger: CATCCACTCTGAGCACCCCCATGCCTGGCTGACCCAGCTGTCTGTCCTGTCGCCCCCAGACCACCCTGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000602040.5 |
||
| CDS CAA 90 bp | CCCACAGTGCTGTCCCCTCCACGCTGCCGGCCTAACTTCTCAACCTaGGTGTCCAGCCCAGGGATCACCCGCTCAGGGCCCTGTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PTVLSPPRCRPNFST*VSSPGITRSGPCPW Trigger: CCAGGGACAGGGCCCTGAGCGGGTGATCCCTGGGCTGGACACCAAGGTTGAGAAGTTAGGCCGGCAGCGTGGAGGGGACAGCACTGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS GCA 72 bp | CGGTCTCCCTATGGGAAGGAGCTGGTCAGAAAGGGCTaGCCTGATCCCCACGGCCACAGCCACTGCCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSPYGKELVRKG*PDPHGHSHCPC Trigger: GCAGGGGCAGTGGCTGTGGCCGTGGGGATCAGGGCAGCCCTTTCTGACCAGCTCCTTCCCATAGGGAGACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602040.5 |
||
| CDS GCA 72 bp | CACCGGGCCACCCCCACAGTGCTGTCCCCTCCACGCTaGCGGCCTAACTTCTCAACCTTGGTGTCCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HRATPTVLSPPR*RPNFSTLVSSP Trigger: TGGGCTGGACACCAAGGTTGAGAAGTTAGGCCGGCAGCGTGGAGGGGACAGCACTGTGGGGGTGGCCCGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS CCA 72 bp | TCAGGGGGCGTGGCGGGAACGGGAGCCCCTACCGAATaGGGTGGCAGAAGAACGAAGGCGACACCAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGVAGTGAPTE*GGRRTKATPSW Trigger: CCAGCTTGGTGTCGCCTTCGTTCTTCTGCCACCCCATTCGGTAGGGGCTCCCGTTCCCGCCACGCCCCCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594151.5 |
||
| CDS CAA 72 bp | CTGTCCCCTCCACGCTGCCGGCCTAACTTCTCAACCTaGGTGTCCAGCCCAGGGATCACCCGCTCAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSPPRCRPNFST*VSSPGITRSGP Trigger: GGGCCCTGAGCGGGTGATCCCTGGGCTGGACACCAAGGTTGAGAAGTTAGGCCGGCAGCGTGGAGGGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS TCA 72 bp | GGCAGCGCCCCACCGTTCTGCTGCCTCCTAGCTGTGTaGCCTAACACCAGCCACCTCCTGCTTCTGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSAPPFCCLLAV*PNTSHLLLLGL Trigger: GAGGCCCAGAAGCAGGAGGTGGCTGGTGTTAGGTCACACAGCTAGGAGGCAGCAGAACGGTGGGGCGCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595934.1 ENST00000597793.5 |
||
| CDS CCA 72 bp | CTCTACGGAGGGTGCCTGGAGTCAGTCATTTCCAGATaGGGTCCGAGAGGCCACGAGGGCTACCCTCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LYGGCLESVISR*GPRGHEGYPRP Trigger: GGGCCGAGGGTAGCCCTCGTGGCCTCTCGGACCCCATCTGGAAATGACTGACTCCAGGCACCCTCCGTAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000598632.5 ENST00000600105.5 |
||
| CDS GCA 72 bp | GCCATCGCATCACACTCCGCCCACACCAAGTCTGGCTaGCCAACCAGGGCAGTGGGGTCTAATCCCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AIASHSAHTKSG*PTRAVGSNPPL Trigger: CAGAGGGGGATTAGACCCCACTGCCCTGGTTGGGCAGCCAGACTTGGTGTGGGCGGAGTGTGATGCGATGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS GCA 72 bp | CCCGGCCCTCACCTGGTGCACAGGACCTGCAGAGTCTaGCTCAACTGGCAAGGCATGACCAGGACACGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGPHLVHRTCRV*LNWQGMTRTRG Trigger: ACCACGTGTCCTGGTCATGCCTTGCCAGTTGAGGCAGACTCTGCAGGTCCTGTGCACCAGGTGAGGGCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS CCA 72 bp | ATCCCTCCCTCCGAGCCTTGGCCTGTTAGCCCCAGCTaGGTCCATTCTCTAGTCCCAGGGGAACAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IPPSEPWPVSPS*VHSLVPGEQAL Trigger: CAGGGCCTGTTCCCCTGGGACTAGAGAATGGACCCAGCTGGGGCTAACAGGCCAAGGCTCGGAGGGAGGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS CCA 72 bp | CTGGGCTCACGGCAGTCCATCAAAGCATCCCACATGTaGGCGCGGGCGCGTATTCTAGGTGCGCACTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LGSRQSIKASHM*ARARILGAHST Trigger: CGTGGAGTGCGCACCTAGAATACGCGCCCGCGCCCACATGTGGGATGCTTTGATGGACTGCCGTGAGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594640.1 |
||
| CDS GCA 72 bp | AGCCCCAACGTGCCACTCCCTCCTGGCTGGCTCTTGTaGCTAGCACACCCATTTACCAGGTCCCTGCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SPNVPLPPGWLL*LAHPFTRSLPY Trigger: GTATGGCAGGGACCTGGTAAATGGGTGTGCTAGGCACAAGAGCCAGCCAGGAGGGAGTGGCACGTTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598632.5 |
||
| CDS CCA 72 bp | AGTCTGCCTCAACTGGCAAGGCATGACCAGGACACGTaGTTACCAGGCAGGGCCTTCCAGCCGCAGGACGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLPQLARHDQDT*LPGRAFQPQDD Trigger: ATCGTCCTGCGGCTGGAAGGCCCTGCCTGGTAACCACGTGTCCTGGTCATGCCTTGCCAGTTGAGGCAGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS TCA 72 bp | ACAGGACCTGCAGAGTCTGCCTCAACTGGCAAGGCATaGCCAGGACACGTGGTTACCAGGCAGGGCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TGPAESASTGKA*PGHVVTRQGLP Trigger: TGGAAGGCCCTGCCTGGTAACCACGTGTCCTGGTCATGCCTTGCCAGTTGAGGCAGACTCTGCAGGTCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595934.1 |
||
| CDS CCA 72 bp | CTGAGTTCCTTCACCCTGTGCTCTACGGAGGGTGCCTaGAGTCAGTCATTTCCAGATGGGGTCCGAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSFTLCSTEGA*SQSFPDGVREA Trigger: GGCCTCTCGGACCCCATCTGGAAATGACTGACTCCAGGCACCCTCCGTAGAGCACAGGGTGAAGGAACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598632.5 ENST00000600105.5 |
||
| CDS CAA 90 bp | ACCAGAATACCAAGCCCCAACGTGCCACTCCCTCCTGGCTGGCTCTaGTGCCTAGCACACCCATTTACCAGGTCCCTGCCATACGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: TRIPSPNVPLPPGWL*CLAHPFTRSLPYAM Trigger: CATAGCGTATGGCAGGGACCTGGTAAATGGGTGTGCTAGGCACAAGAGCCAGCCAGGAGGGAGTGGCACGTTGGGGCTTGGTATTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598632.5 |
||
| CDS GCA 72 bp | CAGGCTGAGTTCCTTCACCCTGTGCTCTACGGAGGGTaGCTGGAGTCAGTCATTTCCAGATGGGGTCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QAEFLHPVLYGG*LESVISRWGPR Trigger: TCTCGGACCCCATCTGGAAATGACTGACTCCAGGCACCCTCCGTAGAGCACAGGGTGAAGGAACTCAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598632.5 ENST00000600105.5 |
||
| CDS CCA 72 bp | GACCAGAATACCAAGCCCCAACGTGCCACTCCCTCCTaGCTGGCTCTTGTGCCTAGCACACCCATTTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: DQNTKPQRATPS*LALVPSTPIYQ Trigger: CTGGTAAATGGGTGTGCTAGGCACAAGAGCCAGCCAGGAGGGAGTGGCACGTTGGGGCTTGGTATTCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598632.5 |
||
| CDS CAA 72 bp | GCAATCGTGTGCAAAACTGCGCGCCTGACATCCCTATaGCACAGGGAAGCCCATCTAGTACTTGCACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AIVCKTARLTSL*HREAHLVLALR Trigger: CCTCAGTGCAAGTACTAGATGGGCTTCCCTGTGCAATAGGGATGTCAGGCGCGCAGTTTTGCACACGATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596095.1 |
||
| CDS CAA 90 bp | AGTTGGTGCCACATAAAGGCTCAACAGATAAAGTGCTGGTGCCTCTaGAGGATGGCGCATGGGAGAACTAAGCCTGACAGATGTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWCHIKAQQIKCWCL*RMAHGRTKPDRCAW Trigger: CCAGGCACATCTGTCAGGCTTAGTTCTCCCATGCGCCATCCTCAAGAGGCACCAGCACTTTATCTGTTGAGCCTTTATGTGGCACCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS CAA 90 bp | CAGCCCCAGGTAAACCTTACGGTTTCTGAAAAGCATGTGCATCTTTaGGGTCCGGAGAAGCGTGTGCAGCCCAAAGTACCTGCGAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QPQVNLTVSEKHVHL*GPEKRVQPKVPAKH Trigger: ATGCTTCGCAGGTACTTTGGGCTGCACACGCTTCTCCGGACCCAAAAGATGCACATGCTTTTCAGAAACCGTAAGGTTTACCTGGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596095.1 |
||
| CDS GCA 72 bp | TGGTGCCACATAAAGGCTCAACAGATAAAGTGCTGGTaGCTCTTGAGGATGGCGCATGGGAGAACTAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WCHIKAQQIKCW*LLRMAHGRTKP Trigger: AGGCTTAGTTCTCCCATGCGCCATCCTCAAGAGGCACCAGCACTTTATCTGTTGAGCCTTTATGTGGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS GCA 72 bp | CACAGTTGGTGCCACATAAAGGCTCAACAGATAAAGTaGTGGTGCCTCTTGAGGATGGCGCATGGGAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: HSWCHIKAQQIK*WCLLRMAHGRT Trigger: AGTTCTCCCATGCGCCATCCTCAAGAGGCACCAGCACTTTATCTGTTGAGCCTTTATGTGGCACCAACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS CAA 90 bp | CACATCTTGGCAATCGTGTGCAAAACTGCGCGCCTGACATCCCTATaGCACAGGGAAGCCCATCTAGTACTTGCACTGAGGTTTAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: HILAIVCKTARLTSL*HREAHLVLALRFKT Trigger: GGTTTTAAACCTCAGTGCAAGTACTAGATGGGCTTCCCTGTGCAATAGGGATGTCAGGCGCGCAGTTTTGCACACGATTGCCAAGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596095.1 |
||
| CDS CCA 72 bp | AGTTGGTGCCACATAAAGGCTCAACAGATAAAGTGCTaGTGCCTCTTGAGGATGGCGCATGGGAGAACTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SWCHIKAQQIKC*CLLRMAHGRTK Trigger: CTTAGTTCTCCCATGCGCCATCCTCAAGAGGCACCAGCACTTTATCTGTTGAGCCTTTATGTGGCACCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS CAA 72 bp | CACATAAAGGCTCAACAGATAAAGTGCTGGTGCCTCTaGAGGATGGCGCATGGGAGAACTAAGCCTGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: HIKAQQIKCWCL*RMAHGRTKPDR Trigger: TCTGTCAGGCTTAGTTCTCCCATGCGCCATCCTCAAGAGGCACCAGCACTTTATCTGTTGAGCCTTTATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS CAA 72 bp | GCTGGGATCTGGAGCCATAGTAAAGAACACATATGCTaGCCTAAAACCCAGGGATACCTTCCACAGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGIWSHSKEHIC*PKTQGYLPQQE Trigger: CTCCTGCTGTGGAAGGTATCCCTGGGTTTTAGGCAAGCATATGTGTTCTTTACTATGGCTCCAGATCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596095.1 |
||
| CDS CAA 72 bp | GTAAACCTTACGGTTTCTGAAAAGCATGTGCATCTTTaGGGTCCGGAGAAGCGTGTGCAGCCCAAAGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: VNLTVSEKHVHL*GPEKRVQPKVP Trigger: AGGTACTTTGGGCTGCACACGCTTCTCCGGACCCAAAAGATGCACATGCTTTTCAGAAACCGTAAGGTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596095.1 |
||
| CDS GCA 72 bp | TCATCTGTAAAACCGGGTAATAGTGCACACAGTTGGTaGCACATAAAGGCTCAACAGATAAAGTGCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSVKPGNSAHSW*HIKAQQIKCWC Trigger: GCACCAGCACTTTATCTGTTGAGCCTTTATGTGGCACCAACTGTGTGCACTATTACCCGGTTTTACAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||
| CDS CCA 72 bp | CCATCATCTGTAAAACCGGGTAATAGTGCACACAGTTaGTGCCACATAAAGGCTCAACAGATAAAGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSVKPGNSAHS*CHIKAQQIKCW Trigger: CCAGCACTTTATCTGTTGAGCCTTTATGTGGCACCAACTGTGTGCACTATTACCCGGTTTTACAGATGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597793.5 |
||