Pregenerated sensors for PTMA (Homo sapiens)
Ensembl gene IDs: ENSG00000187514Ensembl transcript IDs: ENST00000409321.5, ENST00000410064.5, ENST00000440384.1, ENST00000448874.5, ENST00000466801.5, ENST00000467816.1, ENST00000468027.5, ENST00000481928.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGGGTCGCGCGTCGGTCGGCCGGGCTCTCGACTCGACGCCCCACTaGCGCCACCCCGGCAGGCCCGAATGTCTGCATTCGGCGGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: AGRASVGRALDSTPH*RHPGRPECLHSAGQ Trigger: TTGGCCCGCCGAATGCAGACATTCGGGCCTGCCGGGGTGGCGGCAGTGGGGCGTCGAGTCGAGAGCCCGGCCGACCGACGCGCGACCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS GCA 90 bp | ACACGACACGGCCACCAATACCAACAGAGGTCCGGCGTCCGGGCCTaGGGGAACCCCTCGGCCGCTGTCCGGCGAGCGGCTCCGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: TRHGHQYQQRSGVRA*GNPSAAVRRAAPGH Trigger: GTGGCCCGGAGCCGCTCGCCGGACAGCGGCCGAGGGGTTCCCGCAGGCCCGGACGCCGGACCTCTGTTGGTATTGGTGGCCGTGTCGTGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440384.1 |
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| CDS CCA 90 bp | CCTTTAAGTCCTTGGAGACTCCCGGCCGGCAGGCAGAGCTTGCAGTaGCACGCGCGCGGGTCGCGCGTCGGTCGGCCGGGCTCTCGACTC | + |
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Preference number: 5 (lower is better) Translates to: PLSPWRLPAGRQSLQ*HARGSRVGRPGSRL Trigger: GAGTCGAGAGCCCGGCCGACCGACGCGCGACCCGCGCGCGTGCCACTGCAAGCTCTGCCTGCCGGCCGGGAGTCTCCAAGGACTTAAAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS GCA 90 bp | CGGCGGGCCAAGTCCCACGGGAGGTCGCCCCAAAGTCCACCGGGCTaGGTAGGTCCGAGACTGTCGGGGATGCGCCTCTCGGGCTACTAC | + |
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Preference number: 5 (lower is better) Translates to: RRAKSHGRSPQSPPG*VGPRLSGMRLSGYY Trigger: GTAGTAGCCCGAGAGGCGCATCCCCGACAGTCTCGGACCTACGCAGCCCGGTGGACTTTGGGGCGACCTCCCGTGGGACTTGGCCCGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS TCA 90 bp | GTCAGAGATGACGCCAGGGACACAAGGGTTAAGGAGACGCCAAGGTaGCTCGCGCCAATCCCTGCAGGGGCACGACGGGCGCGGACGAGG | + |
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Preference number: 5 (lower is better) Translates to: VRDDARDTRVKETPR*LAPIPAGARRARTR Trigger: CCTCGTCCGCGCCCGTCGTGCCCCTGCAGGGATTGGCGCGAGTCACCTTGGCGTCTCCTTAACCCTTGTGTCCCTGGCGTCATCTCTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS TCA 90 bp | CCATGTCATTACCAGCTGGCCCCAGGCTGGACAGAGCGTTGCTCCTaGTGCCCGGCCTCCCACCAGAGGCTGGCGGCTGCATCTACAGCC | + |
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Preference number: 5 (lower is better) Translates to: PCHYQLAPGWTERCS*CPASHQRLAAASTA Trigger: GGCTGTAGATGCAGCCGCCAGCCTCTGGTGGGAGGCCGGGCATCAGGAGCAACGCTCTGTCCAGCCTGGGGCCAGCTGGTAATGACATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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| CDS TCA 90 bp | GGTCTGTACGGCTGTTCTGTCCGTCCCAAATTAAGAGTCGCATGTTaGGAAAGGCCTGATGCCCCTGCGGTCCCTCTCCCACTGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GLYGCSVRPKLRVAC*ERPDAPAVPLPLVW Trigger: CCAGACCAGTGGGAGAGGGACCGCAGGGGCATCAGGCCTTTCTCAACATGCGACTCTTAATTTGGGACGGACAGAACAGCCGTACAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467816.1 |
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| CDS GCA 90 bp | GCTTTGCGTCCTTCCATTGGCAGTTTCTTCCGTCTGTCTCTCGGTTaGAGCCGAGCTGGGAATGGGGAAAACCCGGAGTGTGGGATCGTG | + |
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Preference number: 5 (lower is better) Translates to: ALRPSIGSFFRLSLG*SRAGNGENPECGIV Trigger: CACGATCCCACACTCCGGGTTTTCCCCATTCCCAGCTCGGCTGCAACCGAGAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS GCA 90 bp | GCGCACATTGGCCGAGAGTGGCGGGCGAACACAAAGTTGACGCTTTaGGTCCTTCCATTGGCAGTTTCTTCCGTCTGTCTCTCGGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: AHIGREWRANTKLTL*VLPLAVSSVCLSVA Trigger: TGCAACCGAGAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCCAATGTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS TCA 90 bp | AGACACGAGCGCACATTGGCCGAGAGTGGCGGGCGAACACAAAGTTaGCGCTTTGCGTCCTTCCATTGGCAGTTTCTTCCGTCTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RHERTLAESGGRTQS*RFASFHWQFLPSVS Trigger: AGAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCCAATGTGCGCTCGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS TCA 90 bp | CCCCACCCTGGGCCAAGCCCAAACTCAGACTACCGGAGTCTCCTCTaGACCTATTCTTGTTCAGGCGCTGCTCGAAAGGTTTTTATAAAT | + |
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Preference number: 5 (lower is better) Translates to: PHPGPSPNSDYRSLL*TYSCSGAARKVFIN Trigger: ATTTATAAAAACCTTTCGAGCAGCGCCTGAACAAGAATAGGTTCAGAGGAGACTCCGGTAGTCTGAGTTTGGGCTTGGCCCAGGGTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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| CDS GCA 90 bp | CTCAGACTACCGGAGTCTCCTCTGAACCTATTCTTGTTCAGGCGCTaGTCGAAAGGTTTTTATAAATATTTAACTAGCAATAATCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: LRLPESPLNLFLFRR*SKGFYKYLTSNNRA Trigger: GGCGCGATTATTGCTAGTTAAATATTTATAAAAACCTTTCGAGCAGCGCCTGAACAAGAATAGGTTCAGAGGAGACTCCGGTAGTCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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| CDS CCA 72 bp | CCTTGGAGACTCCCGGCCGGCAGGCAGAGCTTGCAGTaGCACGCGCGCGGGTCGCGCGTCGGTCGGCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: PWRLPAGRQSLQ*HARGSRVGRPG Trigger: GCCCGGCCGACCGACGCGCGACCCGCGCGCGTGCCACTGCAAGCTCTGCCTGCCGGCCGGGAGTCTCCAAGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS GCA 72 bp | CGCCCCACTGCCGCCACCCCGGCAGGCCCGAATGTCTaGATTCGGCGGGCCAAGTCCCACGGGAGGTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RPTAATPAGPNV*IRRAKSHGRSP Trigger: GGGCGACCTCCCGTGGGACTTGGCCCGCCGAATGCAGACATTCGGGCCTGCCGGGGTGGCGGCAGTGGGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS CCA 72 bp | CGGACTCGATGCGCGATGCCGGCTCCAGCCCTCGAGTaGGACAGCCCGCGGGCCCCGCACGGCATAGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: RTRCAMPAPALE*DSPRAPHGIAV Trigger: GACCGCTATGCCGTGCGGGGCCCGCGGGCTGTCCCACTCGAGGGCTGGAGCCGGCATCGCGCATCGAGTCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409321.5 ENST00000448874.5 |
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| CDS GCA 72 bp | GCGTCGGTCGGCCGGGCTCTCGACTCGACGCCCCACTaGCGCCACCCCGGCAGGCCCGAATGTCTGCATTCG | + |
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Preference number: 6 (lower is better) Translates to: ASVGRALDSTPH*RHPGRPECLHS Trigger: CGAATGCAGACATTCGGGCCTGCCGGGGTGGCGGCAGTGGGGCGTCGAGTCGAGAGCCCGGCCGACCGACGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS CAA 72 bp | TTAAGTCCTTGGAGACTCCCGGCCGGCAGGCAGAGCTaGCAGTGGCACGCGCGCGGGTCGCGCGTCGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: LSPWRLPAGRQS*QWHARGSRVGR Trigger: CCGACCGACGCGCGACCCGCGCGCGTGCCACTGCAAGCTCTGCCTGCCGGCCGGGAGTCTCCAAGGACTTAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS TCA 72 bp | TACCAGCTGGCCCCAGGCTGGACAGAGCGTTGCTCCTaGTGCCCGGCCTCCCACCAGAGGCTGGCGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: YQLAPGWTERCS*CPASHQRLAAA Trigger: TGCAGCCGCCAGCCTCTGGTGGGAGGCCGGGCATCAGGAGCAACGCTCTGTCCAGCCTGGGGCCAGCTGGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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| CDS GCA 72 bp | AAGTCCCACGGGAGGTCGCCCCAAAGTCCACCGGGCTaGGTAGGTCCGAGACTGTCGGGGATGCGCCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: KSHGRSPQSPPG*VGPRLSGMRLS Trigger: CGAGAGGCGCATCCCCGACAGTCTCGGACCTACGCAGCCCGGTGGACTTTGGGGCGACCTCCCGTGGGACTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS TCA 72 bp | GACGCCAGGGACACAAGGGTTAAGGAGACGCCAAGGTaGCTCGCGCCAATCCCTGCAGGGGCACGACGGGCG | + |
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Preference number: 6 (lower is better) Translates to: DARDTRVKETPR*LAPIPAGARRA Trigger: CGCCCGTCGTGCCCCTGCAGGGATTGGCGCGAGTCACCTTGGCGTCTCCTTAACCCTTGTGTCCCTGGCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000410064.5 |
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| CDS CCA 72 bp | CACGGAAGGCGGGACTCCGGAGACACGAGCGCACATTaGCCGAGAGTGGCGGGCGAACACAAAGTTGACGCT | + |
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Preference number: 6 (lower is better) Translates to: HGRRDSGDTSAH*PRVAGEHKVDA Trigger: AGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCCAATGTGCGCTCGTGTCTCCGGAGTCCCGCCTTCCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS GCA 72 bp | GAAAACCCGGAGTGTGGGATCGTGGAGGGCGGACGATaGCAAGTCCAGCAGAGCTTGCGCTCGGGGCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: ENPECGIVEGGR*QVQQSLRSGLE Trigger: TTCTAGCCCCGAGCGCAAGCTCTGCTGGACTTGGCATCGTCCGCCCTCCACGATCCCACACTCCGGGTTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CCA 72 bp | TTGCAGCCGAGCTGGGAATGGGGAAAACCCGGAGTGTaGGATCGTGGAGGGCGGACGATGCCAAGTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LQPSWEWGKPGV*DRGGRTMPSPA Trigger: TGCTGGACTTGGCATCGTCCGCCCTCCACGATCCCACACTCCGGGTTTTCCCCATTCCCAGCTCGGCTGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS GCA 72 bp | CAAGCACACACGGATTCATGTATCAAGCGGACTCGATaGGCGATGCCGGCTCCAGCCCTCGAGTGGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: QAHTDSCIKRTR*AMPAPALEWDS Trigger: GCTGTCCCACTCGAGGGCTGGAGCCGGCATCGCGCATCGAGTCCGCTTGATACATGAATCCGTGTGTGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409321.5 ENST00000448874.5 |
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| CDS CCA 72 bp | GGGACTCCGGAGACACGAGCGCACATTGGCCGAGAGTaGCGGGCGAACACAAAGTTGACGCTTTGCGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GTPETRAHIGRE*RANTKLTLCVL Trigger: AAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCCAATGTGCGCTCGTGTCTCCGGAGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CAA 72 bp | ATCGTGGAGGGCGGACGATGCCAAGTCCAGCAGAGCTaGCGCTCGGGGCTAGAAGAGAGACTGAGTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: IVEGGRCQVQQS*RSGLEERLSLP Trigger: AGGGAGACTCAGTCTCTCTTCTAGCCCCGAGCGCAAGCTCTGCTGGACTTGGCATCGTCCGCCCTCCACGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CAA 90 bp | GAGTGTGGGATCGTGGAGGGCGGACGATGCCAAGTCCAGCAGAGCTaGCGCTCGGGGCTAGAAGAGAGACTGAGTCTCCCTTCTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: ECGIVEGGRCQVQQS*RSGLEERLSLPSQF Trigger: AAACTGAGAAGGGAGACTCAGTCTCTCTTCTAGCCCCGAGCGCAAGCTCTGCTGGACTTGGCATCGTCCGCCCTCCACGATCCCACACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CAA 90 bp | CGCTTTGCGTCCTTCCATTGGCAGTTTCTTCCGTCTGTCTCTCGGTaGCAGCCGAGCTGGGAATGGGGAAAACCCGGAGTGTGGGATCGT | + |
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Preference number: 6 (lower is better) Translates to: RFASFHWQFLPSVSR*QPSWEWGKPGVWDR Trigger: ACGATCCCACACTCCGGGTTTTCCCCATTCCCAGCTCGGCTGCAACCGAGAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CAA 90 bp | CGAGAGTGGCGGGCGAACACAAAGTTGACGCTTTGCGTCCTTCCATaGGCAGTTTCTTCCGTCTGTCTCTCGGTTGCAGCCGAGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: REWRANTKLTLCVLP*AVSSVCLSVAAELG Trigger: TCCCAGCTCGGCTGCAACCGAGAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CCA 72 bp | TCTCCTCGACAGAAAACAGGCCATGTCATTACCAGCTaGCCCCAGGCTGGACAGAGCGTTGCTCCTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: SPRQKTGHVITS*PQAGQSVAPDA Trigger: GGCATCAGGAGCAACGCTCTGTCCAGCCTGGGGCCAGCTGGTAATGACATGGCCTGTTTTCTGTCGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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| CDS CAA 72 bp | GGCCACCTACAAAGTCAGAAACAGTCCCTCCGCAGCTaGAGCACCTCAGCTAAAGGCAGGTGGGGAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: GHLQSQKQSLRS*STSAKGRWGDP Trigger: TGGGTCTCCCCACCTGCCTTTAGCTGAGGTGCTCAAGCTGCGGAGGGACTGTTTCTGACTTTGTAGGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468027.5 |
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| CDS CAA 90 bp | AGCGCACATTGGCCGAGAGTGGCGGGCGAACACAAAGTTGACGCTTaGCGTCCTTCCATTGGCAGTTTCTTCCGTCTGTCTCTCGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SAHWPRVAGEHKVDA*RPSIGSFFRLSLGC Trigger: GCAACCGAGAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCCAATGTGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CAA 90 bp | GAGACACGAGCGCACATTGGCCGAGAGTGGCGGGCGAACACAAAGTaGACGCTTTGCGTCCTTCCATTGGCAGTTTCTTCCGTCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ETRAHIGREWRANTK*TLCVLPLAVSSVCL Trigger: GAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCCAATGTGCGCTCGTGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS TCA 72 bp | GGCTGTTCTGTCCGTCCCAAATTAAGAGTCGCATGTTaGGAAAGGCCTGATGCCCCTGCGGTCCCTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GCSVRPKLRVAC*ERPDAPAVPLP Trigger: TGGGAGAGGGACCGCAGGGGCATCAGGCCTTTCTCAACATGCGACTCTTAATTTGGGACGGACAGAACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467816.1 |
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| CDS TCA 72 bp | CGCACATTGGCCGAGAGTGGCGGGCGAACACAAAGTTaGCGCTTTGCGTCCTTCCATTGGCAGTTTCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: RTLAESGGRTQS*RFASFHWQFLP Trigger: CGGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCCAATGTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS GCA 72 bp | GGCCGAGAGTGGCGGGCGAACACAAAGTTGACGCTTTaGGTCCTTCCATTGGCAGTTTCTTCCGTCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GREWRANTKLTL*VLPLAVSSVCL Trigger: GAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CAA 72 bp | TCCTTCCATTGGCAGTTTCTTCCGTCTGTCTCTCGGTaGCAGCCGAGCTGGGAATGGGGAAAACCCGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: SFHWQFLPSVSR*QPSWEWGKPGV Trigger: CACTCCGGGTTTTCCCCATTCCCAGCTCGGCTGCAACCGAGAGACAGACGGAAGAAACTGCCAATGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS CAA 72 bp | GCGCACATTGGCCGAGAGTGGCGGGCGAACACAAAGTaGACGCTTTGCGTCCTTCCATTGGCAGTTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: AHIGREWRANTK*TLCVLPLAVSS Trigger: GGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCGCCACTCTCGGCCAATGTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS GCA 72 bp | CTCCAGTCAACACCCTCCAGGCTCCATCATGAAACCTaGACATTAACTGCCCCAGGACAAGGGCTTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LQSTPSRLHHET*TLTAPGQGLFP Trigger: GGGGAAAAGCCCTTGTCCTGGGGCAGTTAATGTGCAGGTTTCATGATGGAGCCTGGAGGGTGTTGACTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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| CDS CAA 72 bp | CGGGCGAACACAAAGTTGACGCTTTGCGTCCTTCCATaGGCAGTTTCTTCCGTCTGTCTCTCGGTTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RANTKLTLCVLP*AVSSVCLSVAA Trigger: GGCTGCAACCGAGAGACAGACGGAAGAAACTGCCAATGGAAGGACGCAAAGCGTCAACTTTGTGTTCGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466801.5 |
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| CDS TCA 72 bp | GGGCCAAGCCCAAACTCAGACTACCGGAGTCTCCTCTaGACCTATTCTTGTTCAGGCGCTGCTCGAAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GPSPNSDYRSLL*TYSCSGAARKV Trigger: AACCTTTCGAGCAGCGCCTGAACAAGAATAGGTTCAGAGGAGACTCCGGTAGTCTGAGTTTGGGCTTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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| CDS CCA 72 bp | GTTTCCTTCCTGTTCTTAAGATTCAGGACCACACAGTaGCCACCTACAAAGTCAGAAACAGTCCCTCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: VSFLFLRFRTTQ*PPTKSETVPPQ Trigger: CTGCGGAGGGACTGTTTCTGACTTTGTAGGTGGCCACTGTGTGGTCCTGAATCTTAAGAACAGGAAGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468027.5 |
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| CDS CCA 72 bp | TTAACTAGCAATAATCGCGCCTCGGGTAAAGCTCATTaGCTACGATACTGCCACTGTGCAAAGCTATACATA | + |
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Preference number: 6 (lower is better) Translates to: LTSNNRASGKAH*LRYCHCAKLYI Trigger: TATGTATAGCTTTGCACAGTGGCAGTATCGTAGCCAATGAGCTTTACCCGAGGCGCGATTATTGCTAGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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| CDS GCA 72 bp | CCGGAGTCTCCTCTGAACCTATTCTTGTTCAGGCGCTaGTCGAAAGGTTTTTATAAATATTTAACTAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: PESPLNLFLFRR*SKGFYKYLTSN Trigger: ATTGCTAGTTAAATATTTATAAAAACCTTTCGAGCAGCGCCTGAACAAGAATAGGTTCAGAGGAGACTCCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481928.1 |
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