RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTK2B (Homo sapiens)

Ensembl gene IDs: ENSG00000120899

Ensembl transcript IDs: ENST00000346049.10, ENST00000397497.8, ENST00000397501.5, ENST00000412793.5, ENST00000420218.3, ENST00000461615.1, ENST00000482543.1, ENST00000495097.1, ENST00000496920.1, ENST00000517339.5, ENST00000519512.5, ENST00000519650.5, ENST00000521000.1, ENST00000521164.5, ENST00000522245.1, ENST00000522338.5, ENST00000522517.5

Found 869 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTaGTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCT +
Preference number: 1 (lower is better)
Translates to: KRADLAQGPILAASL*FFPLMLGLLTTQHP
Trigger: AGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCAGTGGCAAGGGAAGGTaGCTCCCCTTGGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPSGKGR*LPLAFP
Trigger: GGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACT...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCCCTGGAAGACCCACATaGCCAACAGCAAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPPGRPT*PTARQG
Trigger: CCCCTGCCTTGCTGTTGGTCATGTGGGTCTTCCAGG...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCGGGGAGAGGGCGTCGTaGAAAGTGGCAAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPGERAS*KVAREG
Trigger: ACCTTCCCTTGCCACTTTGCACGACGCCCTCTCCCC...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTAGTGGCAAGGGAAGGTaGCTCCCCTTGGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSSGKGR*LPLAFP
Trigger: GGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACT...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCCCCCAGGAGCCCCCTaGATGGACCAGGCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: QHSILCLDSQLACSWTVPPPGAP*MDQAGL
Trigger: TAAGCCAGCCTGGTCCATGCAGGGGGCTCCTGGGGG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCCTGGAAGACCCACATaGCCAACAGCAAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: SILCLDSQLACSWTVPQVPGRPT*PTARQG
Trigger: CCCCTGCCTTGCTGTTGGTCATGTGGGTCTTCCAGG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTGTCCAGCTGCAGCCTaGGCAGTACAGCCAGGGGTA +
Preference number: 2 (lower is better)
Translates to: SILCLDSQLACSWTVPQVCPAAA*AVQPGV
Trigger: TACCCCTGGCTGTACTGCTCAGGCTGCAGCTGGACA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCCTTGGCCTTCCCCCTaGAAGACCCACATGACCAAC +
Preference number: 2 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESPWPSP*KTHMTN
Trigger: GTTGGTCATGTGGGTCTTCCAGGGGGAAGGCCAAGG...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTGGCTTAGGGAGCAGTaGCCAGGCAGCAGCAGTCCC +
Preference number: 2 (lower is better)
Translates to: QHSILCLDSQLACSWTVPWLREQ*PGSSSP
Trigger: GGGACTGCTGCTGCCTGGCCACTGCTCCCTAAGCCA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTGTCCAGCTGCAGCCTaGGCAGTACAGCCAGGGGTA +
Preference number: 2 (lower is better)
Translates to: EGRRGRERNSLVPKSACHCPAAA*AVQPGV
Trigger: TACCCCTGGCTGTACTGCTCAGGCTGCAGCTGGACA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTCCCCTCTGTCCAGCTaGAGCCTGAGCAGTACAGCC +
Preference number: 2 (lower is better)
Translates to: EGRRGRERNSLVPKSACHSPLSS*SLSSTA
Trigger: GGCTGTACTGCTCAGGCTGCAGCTGGACAGAGGGGA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCTGCATGGACCAGGCTaGCTTAGGGAGCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: QHSILCLDSQLACSWTVPLHGPG*LREQWP
Trigger: TGGCCACTGCTCCCTAAGCCAGCCTGGTCCATGCAG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCGGGAAAGGAATAGCTTaGTTCCCAAATCGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPGKGIA*FPNRPA
Trigger: GGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCC...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR CAA 90 bp GGTTTGTTGACAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTaGTTCCTGGACTGTGCCCCAGGTCCTCCCTCAGGAGGGCACATG +
Preference number: 2 (lower is better)
Translates to: GLLTTQHPVPGLPIS*FLDCAPGPPSGGHM
Trigger: CATGTGCCCTCCTGAGGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTGTCAACAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGCATCAAGGGACATCTaGGGGCCGAAGAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPASRDI*GPKRKG
Trigger: TCCCTTCCTCTTCGGCCCTCAGATGTCCCTTGATGC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTATCTCACTGGCTGCCTaGCCCCCAAAACAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGISLAA*PPKQSS
Trigger: GGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGAT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACCTTGGCCTTCCCCCTaGAAGACCCACATGACCAAC +
Preference number: 2 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPPWPSP*KTHMTN
Trigger: GTTGGTCATGTGGGTCTTCCAGGGGGAAGGCCAAGG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACTGTCCAGCTGCAGCCTaGGCAGTACAGCCAGGGGTA +
Preference number: 2 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDCPAAA*AVQPGV
Trigger: TACCCCTGGCTGTACTGCTCAGGCTGCAGCTGGACA...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCATCTCACTGGCTGCCTaGCCCCCAAAACAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: QHSILCLDSQLACSWTVPISLAA*PPKQSS
Trigger: GGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGAT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCCTCAGGAGGGCACATaGTGTCAGTCCAGACCAAAC +
Preference number: 2 (lower is better)
Translates to: QHSILCLDSQLACSWTVPPQEGT*CQSRPN
Trigger: GTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTCCTCAGGAGGGCACATaGTGTCAGTCCAGACCAAAC +
Preference number: 2 (lower is better)
Translates to: QEESGFGPRSYLGRISLLPQEGT*CQSRPN
Trigger: GTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGG...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCTGCATGGACCAGGCTaGCTTAGGGAGCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: RRGRERNSLVPKSACHVHLHGPG*LREQWP
Trigger: TGGCCACTGCTCCCTAAGCCAGCCTGGTCCATGCAG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTCCTCATCTCACTGGCTaGCTGACCCCCAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: QEESGFGPRSYLGRISLLPHLTG*LTPKTK
Trigger: CTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGG...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCCTTGGCCTTCCCCCTaGAAGACCCACATGACCAAC +
Preference number: 2 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPPWPSP*KTHMTN
Trigger: GTTGGTCATGTGGGTCTTCCAGGGGGAAGGCCAAGG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTCAATTAGCTTGTTCCTaGACTGTGCCCCAGGTCCTC +
Preference number: 2 (lower is better)
Translates to: QEESGFGPRSYLGRISLLQLACS*TVPQVL
Trigger: GAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTG...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGAGTGGCAAGGGAAGGTaGCTCCCCTTGGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLSGKGR*LPLAFP
Trigger: GGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACT...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCCCCCAGGAGCCCCCTaGATGGACCAGGCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAPPGAP*MDQAGL
Trigger: TAAGCCAGCCTGGTCCATGCAGGGGGCTCCTGGGGG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTTACACTGTACAAGAATaGCAGGCCCATCCCTCATCT +
Preference number: 2 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGYTVQE*QAHPSS
Trigger: AGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTA...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCCTCATCTCACTGGCTaGCTGACCCCCAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNPHLTG*LTPKTK
Trigger: CTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCAATTAGCTTGTTCCTaGACTGTGCCCCAGGTCCTC +
Preference number: 2 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPQLACS*TVPQVL
Trigger: GAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCAGCAGTCCCCCTCTaGGCCATCTTTGTCACCGTC +
Preference number: 2 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAAAVPL*AIFVTV
Trigger: GACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTGCAGCAGTCCCCCTCTaGGCCATCTTTGTCACCGTC +
Preference number: 2 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFAAVPL*AIFVTV
Trigger: GACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGC...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGGGAGAGGGCGTCGTaGAAAGTGGCAAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAGERAS*KVAREG
Trigger: ACCTTCCCTTGCCACTTTGCACGACGCCCTCTCCCC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTCCCCTCTGTCCAGCTaGAGCCTGAGCAGTACAGCC +
Preference number: 2 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFSPLSS*SLSSTA
Trigger: GGCTGTACTGCTCAGGCTGCAGCTGGACAGAGGGGA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTCTGCATGGACCAGGCTaGCTTAGGGAGCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFLHGPG*LREQWP
Trigger: TGGCCACTGCTCCCTAAGCCAGCCTGGTCCATGCAG...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCATCAAGGGACATCTaGGGGCCGAAGAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAASRDI*GPKRKG
Trigger: TCCCTTCCTCTTCGGCCCTCAGATGTCCCTTGATGC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCCCCCAGGAGCCCCCTaGATGGACCAGGCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTPPGAP*MDQAGL
Trigger: TAAGCCAGCCTGGTCCATGCAGGGGGCTCCTGGGGG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATTACACTGTACAAGAATaGCAGGCCCATCCCTCATCT +
Preference number: 2 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNYTVQE*QAHPSS
Trigger: AGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTA...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCCTTGGCCTTCCCCCTaGAAGACCCACATGACCAAC +
Preference number: 2 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAPWPSP*KTHMTN
Trigger: GTTGGTCATGTGGGTCTTCCAGGGGGAAGGCCAAGG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCAGCAGTCCCCCTCTaGGCCATCTTTGTCACCGTC +
Preference number: 2 (lower is better)
Translates to: INFNIHCTRMPGPSLISLAAVPL*AIFVTV
Trigger: GACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTTGTCCAGCTGCAGCCTaGGCAGTACAGCCAGGGGTA +
Preference number: 2 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTCPAAA*AVQPGV
Trigger: TACCCCTGGCTGTACTGCTCAGGCTGCAGCTGGACA...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCAGCAGTCCCCCTCTaGGCCATCTTTGTCACCGTC +
Preference number: 2 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTAAVPL*AIFVTV
Trigger: GACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGGGAGAGGGCGTCGTaGAAAGTGGCAAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTGERAS*KVAREG
Trigger: ACCTTCCCTTGCCACTTTGCACGACGCCCTCTCCCC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTTCCCCAGCTTCTCTGTaGATCAAGGGACATCTGAGG +
Preference number: 2 (lower is better)
Translates to: NFNIHCTRMPGPSLISLASPASL*IKGHLR
Trigger: CCTCAGATGTCCCTTGATGCACAGAGAAGCTGGGGA...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCTGCATGGACCAGGCTaGCTTAGGGAGCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTLHGPG*LREQWP
Trigger: TGGCCACTGCTCCCTAAGCCAGCCTGGTCCATGCAG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTTCCCCAGCTTCTCTGTaGATCAAGGGACATCTGAGG +
Preference number: 2 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTSPASL*IKGHLR
Trigger: CCTCAGATGTCCCTTGATGCACAGAGAAGCTGGGGA...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGGAAAGGAATAGCTTaGTTCCCAAATCGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTGKGIA*FPNRPA
Trigger: GGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR CCA 72 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTaGACTGTGCCCCAGGTCCTCCCTCAGGAGGGCACA +
Preference number: 3 (lower is better)
Translates to: SILCLDSQLACS*TVPQVLPQEGT
Trigger: TGTGCCCTCCTGAGGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR GCA 72 bp GATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTaGTTCTTCCCCCTGATGCTTGGTTTGTTGACAACA +
Preference number: 3 (lower is better)
Translates to: DLAQGPILAASL*FFPLMLGLLTT
Trigger: TGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
3UTR-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCCCTCTGAGCCATCTTaGTCACCGTCACCCTGTGTC +
Preference number: 3 (lower is better)
Translates to: INFNIHCTRMPGPSLISLPSEPS*SPSPCV
Trigger: GACACAGGGTGACGGTGACAAAGATGGCTCAGAGGG...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTCGGGCACCGCCAGGTaGGCCGGGACGGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSGTAR*AGTAAS
Trigger: ACTTGCCGCCGTCCCGGCTCACCTGGCGGTGCCCGA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCAGCTCTCTGAGAGGTaGGACCGCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPQLSER*DRRASR
Trigger: CCTGGAGGCCCGGCGGTCCCACCTCTCAGAGAGCTG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCGCACTCCTCCTCCCTaGGCGAGGCGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPRTPPP*ARRTAG
Trigger: TCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCATCCACGCTCCCGATaGGCTTCCGCAGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPHPRSR*ASAGSA
Trigger: GGCTGACCCTGCGGAAGCTCATCGGGAGCGTGGATG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCCTCGGGGGCTTCTGTaGGGGCCCTGTGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPPRGLL*GPCELQ
Trigger: CTGGAGTTCACAGGGCCCCCACAGAAGCCCCCGAGG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATGCACACCAGCTCGGTaGAGCGGGGCCGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRCTPAR*SGAGHW
Trigger: CCAGTGACCGGCCCCGCTTCACCGAGCTGGTGTGCA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTGCACACCAGCTCGGTaGAGCGGGGCCGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPCTPAR*SGAGHW
Trigger: CCAGTGACCGGCCCCGCTTCACCGAGCTGGTGTGCA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGACGCACTCCTCCTCCCTaGGCGAGGCGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRRTPPP*ARRTAG
Trigger: TCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCG...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTATGCTGCAGCTCTCTaGGAGGTGGGACCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPYAAAL*EVGPPG
Trigger: GCCCGGCGGTCCCACCTCTCAGAGAGCTGCAGCATA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCGCAGCAGTCCCCCTCTaGGCCATCTTTGTCACCGTC +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPAAVPL*AIFVTV
Trigger: GACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGC...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTCCCATCCGCGGGCCTaGGGTTCCCGGGGATTGGTT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSHPRA*GSRGLV
Trigger: AACCAATCCCCGGGAACCTCAGGCCCGCGGATGGGA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGCCCAGCTGAAGTACTaGCTGGCCCTCCTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPAQLKY*LALLQR
Trigger: CCGCTGGAGGAGGGCCAGGCAGTACTTCAGCTGGGC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCGAGGTCACGGCGTTCTaGTGTGCCAGCCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPEVTAF*CASRIL
Trigger: CAAGATGCGGCTGGCACAGCAGAACGCCGTGACCTC...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCACCCTCCGTCACTCTaGAGGTGGGTGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPHPPSL*RWVGQI
Trigger: AATCTGGCCCACCCACCTGCAGAGTGACGGAGGGTG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTGGGAGACCCTTCCGTaGTACCCCGGCCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESWETLP*YPGQGP
Trigger: GGGTCCCTGGCCGGGGTAGCACGGAAGGGTCTCCCA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTCTCGGCTGCTGGGTTaGATGAAGTCCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPSRLLG*MKSSSR
Trigger: GCGGGAGGAGGACTTCATCCAACCCAGCAGCCGAGA...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCGTGGGTGGGCCAGATTaGCCAGAACCTTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPVGGPD*PEPWPG
Trigger: ACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCAC...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCACTCTGCAGGTGGGTaGGCCAGATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPHSAGG*ARLART
Trigger: GGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGAAGACGCAGGCAGGTaGCCCCCACCCTCCGTCACT +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPEDAGR*PPPSVT
Trigger: AGTGACGGAGGGTGGGGGCCACCTGCCTGCGTCTTC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTGGGCCATGCCCTCGCTaGCCTTGCTGGCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGGPCPR*PCWRSA
Trigger: AGCGCTACGCCAGCAAGGTCAGCGAGGGCATGGCCC...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTCTCCAGCACCCCGATaGCATCCTTGTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPSPAPR*HPCSPA
Trigger: GGCTGGAGAACAAGGATGTCATCGGGGTGCTGGAGA...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTTGCACACCAGCTCGGTaGAGCGGGGCCGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSCTPAR*SGAGHW
Trigger: CCAGTGACCGGCCCCGCTTCACCGAGCTGGTGTGCA...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTCTGTGGGGGCCCTGTaGACTCCAGGTAGCCGACCT +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPSVGAL*TPGSRP
Trigger: AGGTCGGCTACCTGGAGTTCACAGGGCCCCCACAGA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTCTGTGGGGGCCCTGTaGACTCCAGGTAGCCGACCT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSVGAL*TPGSRP
Trigger: AGGTCGGCTACCTGGAGTTCACAGGGCCCCCACAGA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCGCCCAGCTGAAGTACTaGCTGGCCCTCCTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESAQLKY*LALLQR
Trigger: CCGCTGGAGGAGGGCCAGGCAGTACTTCAGCTGGGC...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTGGGCTGGATGGACTGTaGGCCCAGCCTCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSGLDGL*AQPRGL
Trigger: AAGCCCCCGAGGCTGGGCGCACAGTCCATCCAGCCC...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTGGGCTGGATGGACTGTaGGCCCAGCCTCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGGLDGL*AQPRGL
Trigger: AAGCCCCCGAGGCTGGGCGCACAGTCCATCCAGCCC...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCCCCCAGGAGCCCCCTaGATGGACCAGGCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHPPGAP*MDQAGL
Trigger: TAAGCCAGCCTGGTCCATGCAGGGGGCTCCTGGGGG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCACCCACCGTCATCTGTaGGTGCAGCCAGTGGATCTC +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPTHRHL*VQPVDL
Trigger: GAGATCCACTGGCTGCACCCACAGATGACGGTGGGT...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTAGCGGGGCCGGTCACTaGGGTCGTAGTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGSGAGH*GRSPSS
Trigger: GCTGCTGGGACTACGACCCCAGTGACCGGCCCCGCT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCCGTCACTCTGCAGGTaGGTGGGCCAGATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPPSLCR*VGQIGQ
Trigger: CTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGACCCTACTACGCCGCCTaGGAGACCCTTCCGTGCTAC +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRPYYAA*ETLPCY
Trigger: GTAGCACGGAAGGGTCTCCCAGGCGGCGTAGTAGGG...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397501.5
3UTR CAA 72 bp GTGGCCAGGCAGCAGCAGTCCCCCTCTGAGCCATCTTaGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: VARQQQSPSEPS*SPSPCVHSPES
Trigger: GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCTGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTCGGGCACCGCCAGGTaGGCCGGGACGGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPSGTAR*AGTAAS
Trigger: ACTTGCCGCCGTCCCGGCTCACCTGGCGGTGCCCGA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
CDS-3UTR TCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAGTGGGCTTTGCGTCCTaGCTAGTCAGCTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRVGFAS*LVSWRI
Trigger: GATCCGCCAGCTGACTAGTCAGGACGCAAAGCCCAC...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCTGGGGACATCCATTTaGTGGGGAGACGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPLGTSI*WGDESQ
Trigger: CTGTGACTCGTCTCCCCATCAAATGGATGTCCCCAG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCATCCACGCTCCCGATaGGCTTCCGCAGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVHPRSR*ASAGSA
Trigger: GGCTGACCCTGCGGAAGCTCATCGGGAGCGTGGATG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCTGCCAGGTCTTTGTTaGGCAGTTTCTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPLPGLC*AVSGCP
Trigger: AGGGCACCCAGAAACTGCTCAACAAAGACCTGGCAG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGACCTGGAAGACCCACATaGCCAACAGCAAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRPGRPT*PTARQG
Trigger: CCCCTGCCTTGCTGTTGGTCATGTGGGTCTTCCAGG...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCAGTGGCAAGGGAAGGTaGCTCCCCTTGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESSGKGR*LPLAFP
Trigger: GGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACT...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCAGGCCGGCGTAACGTaGCCAACTTTACTCGACTCA +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPQAGVT*PTLLDS
Trigger: TGAGTCGAGTAAAGTTGGGCACGTTACGCCGGCCTG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACCACCATGGGCTCTaGAGGGCCTTCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPHHHGL*RAFRPA
Trigger: CGCCGGCCTGAAGGCCCTGCAGAGCCCATGGTGGTG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAGGGGAGAGGGCGTCGTaGAAAGTGGCAAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRGERAS*KVAREG
Trigger: ACCTTCCCTTGCCACTTTGCACGACGCCCTCTCCCC...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTCCCCTCTGTCCAGCTaGAGCCTGAGCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSPLSS*SLSSTA
Trigger: GGCTGTACTGCTCAGGCTGCAGCTGGACAGAGGGGA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCCCAGGAGCCCCCTaGATGGACCAGGCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSPPGAP*MDQAGL
Trigger: TAAGCCAGCCTGGTCCATGCAGGGGGCTCCTGGGGG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCCTGGTACCACCACCATaGGCTCTGCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPLVPPP*ALQGLQ
Trigger: CTGAAGGCCCTGCAGAGCCCATGGTGGTGGTACCAG...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCAGCCAACCGGATGTTaGGCCCGATCCGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSQPTGC*ARSARS
Trigger: TGAGCGGGCGGATCGGGCCCAACATCCGGTTGGCTG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACAGCTCTCTGAGAGGTaGGACCGCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPQLSER*DRRASR
Trigger: CCTGGAGGCCCGGCGGTCCCACCTCTCAGAGAGCTG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCAGCGGGGCCGGTCACTaGGGTCGTAGTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPSGAGH*GRSPSS
Trigger: GCTGCTGGGACTACGACCCCAGTGACCGGCCCCGCT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCAAGACATTGTGCCGGTaGAGAGGTGGGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPKTLCR*RGGVCS
Trigger: ACTGCACACCCCACCTCTCCACCGGCACAATGTCTT...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCGCCGACCTCCTTCTCTaGCGTCAATGGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPADLLL*RQWGLI
Trigger: GATAAGTCCCCATTGACGCCAGAGAAGGAGGTCGGC...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCCTCGGGGGCTTCTGTaGGGGCCCTGTGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVPRGLL*GPCELQ
Trigger: CTGGAGTTCACAGGGCCCCCACAGAAGCCCCCGAGG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAAGGTTAGCTGTGGGCTaGATGGACTGTGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRRLAVG*MDCAPS
Trigger: GCTGGGCGCACAGTCCATCCAGCCCACAGCTAACCT...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCCACTCTGCAGGTGGGTaGGCCAGATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPHSAGG*ARLART
Trigger: GGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTG...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTGAAGACGCAGGCAGGTaGCCCCCACCCTCCGTCACT +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGEDAGR*PPPSVT
Trigger: AGTGACGGAGGGTGGGGGCCACCTGCCTGCGTCTTC...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTGGCTTAGGGAGCAGTaGCCAGGCAGCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESWLREQ*PGSSSP
Trigger: GGGACTGCTGCTGCCTGGCCACTGCTCCCTAAGCCA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATATGCTGCAGCTCTCTaGGAGGTGGGACCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPYAAAL*EVGPPG
Trigger: GCCCGGCGGTCCCACCTCTCAGAGAGCTGCAGCATA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCCCTGTGCACGCAGTTaGTGCTCTCCAGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHPCARS*CSPGRP
Trigger: TGGCCTACCTGGAGAGCATCAACTGCGTGCACAGGG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTCTGTGGGGGCCCTGTaGACTCCAGGTAGCCGACCT +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVSVGAL*TPGSRP
Trigger: AGGTCGGCTACCTGGAGTTCACAGGGCCCCCACAGA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCATCCACGCTCCCGATaGGCTTCCGCAGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHHPRSR*ASAGSA
Trigger: GGCTGACCCTGCGGAAGCTCATCGGGAGCGTGGATG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATGCAGCAGTCCCCCTCTaGGCCATCTTTGTCACCGTC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHAAVPL*AIFVTV
Trigger: GACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGC...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTGCAGAGGGTCAGCCCTaGAAGAGCCCCACACAGGCC +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLAEGQP*KSPTQA
Trigger: GGCCTGTGTGGGGCTCTTTCAGGGCTGACCCTCTGC...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517339.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCATGAGAGAGCCTTGGTaGTCACCCTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESMREPW*SPCSRQ
Trigger: CTGCCGGCTGCAGGGTGAGCACCAAGGCTCTCTCAT...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCGAGGTCACGGCGTTCTaGTGTGCCAGCCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESEVTAF*CASRIL
Trigger: CAAGATGCGGCTGGCACAGCAGAACGCCGTGACCTC...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTCCCCAGCTTCTCTGTaGATCAAGGGACATCTGAGG +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPSPASL*IKGHLR
Trigger: CCTCAGATGTCCCTTGATGCACAGAGAAGCTGGGGA...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCCCTCCAGGTTTAGCATaGGGATCTGGGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPPPGLA*GSGAGC
Trigger: ACAGCCTGCCCCAGATCCCCATGCTAAACCTGGAGG...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGGCTCCAAGATTTTaGGGGTTCGGTAGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPWAPRF*GFGSEH
Trigger: ATGCTCGCTACCGAACCCCCAAAATCTTGGAGCCCA...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATTGGAGCCAGGAGGTTaGTTTGCGGAGGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRLEPGG*FAEGVC
Trigger: ACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACCTCGGGGGCTTCTGTaGGGGCCCTGTGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPPRGLL*GPCELQ
Trigger: CTGGAGTTCACAGGGCCCCCACAGAAGCCCCCGAGG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCGTCACTCTGCAGGTaGGTGGGCCAGATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSPSLCR*VGQIGQ
Trigger: CTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCCGTCACTCTGCAGGTaGGTGGGCCAGATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVPSLCR*VGQIGQ
Trigger: CTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCTGCATGGACCAGGCTaGCTTAGGGAGCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESLHGPG*LREQWP
Trigger: TGGCCACTGCTCCCTAAGCCAGCCTGGTCCATGCAG...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCCCAAGGTCCTATCTTaGCCGCATCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPPKVLS*PHLSAS
Trigger: AGAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGGGCCATGCCCTCGCTaGCCTTGCTGGCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNGPCPR*PCWRSA
Trigger: AGCGCTACGCCAGCAAGGTCAGCGAGGGCATGGCCC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGGGCCATGCCCTCGCTaGCCTTGCTGGCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPGPCPR*PCWRSA
Trigger: AGCGCTACGCCAGCAAGGTCAGCGAGGGCATGGCCC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGGCAGTAGCCGTCTATaGGGTCAGCCATGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPGSSRL*GQPCSQ
Trigger: CTGAGAACATGGCTGACCTCATAGACGGCTACTGCC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCAGTACAGCACGAGGGTaGGCACCTTCAGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSTARG*APSGSS
Trigger: AGAACTCCCTGAAGGTGCTCACCCTCGTGCTGTACT...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTCTCCAGCACCCCGATaGCATCCTTGTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHSPAPR*HPCSPA
Trigger: GGCTGGAGAACAAGGATGTCATCGGGGTGCTGGAGA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCAGTGGCAAGGGAAGGTaGCTCCCCTTGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPSGKGR*LPLAFP
Trigger: GGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCCAGGCCGGCGTAACGTaGCCAACTTTACTCGACTCA +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPQAGVT*PTLLDS
Trigger: TGAGTCGAGTAAAGTTGGGCACGTTACGCCGGCCTG...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAACCGTCATCTGTGGGTaGAGCCAGTGGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRTVICG*SQWISS
Trigger: CGATGAGATCCACTGGCTGCACCCACAGATGACGGT...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCAGGCAGGTGGGCTTTaGGTCCTGACTAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHQAGGL*VLTSQL
Trigger: CAGCTGACTAGTCAGGACGCAAAGCCCACCTGCCTG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCAGGCAGGTGGGCTTTaGGTCCTGACTAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESQAGGL*VLTSQL
Trigger: CAGCTGACTAGTCAGGACGCAAAGCCCACCTGCCTG...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCATCTTCACGGGCAATaGCATACTGTGGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPHLHGQ*HTVDLR
Trigger: CCGGAGGTCCACAGTATGGCATTGCCCGTGAAGATG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTCAGCCTCCCACAGCTaGTGGGCCTCTTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLSASHS*WASSRL
Trigger: CAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTCAGCCTCCCACAGCTaGTGGGCCTCTTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHSASHS*WASSRL
Trigger: CAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGGGCTGGATGGACTGTaGGCCCAGCCTCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDGLDGL*AQPRGL
Trigger: AAGCCCCCGAGGCTGGGCGCACAGTCCATCCAGCCC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGGGCTGGATGGACTGTaGGCCCAGCCTCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNGLDGL*AQPRGL
Trigger: AAGCCCCCGAGGCTGGGCGCACAGTCCATCCAGCCC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCACCCTCCGTCACTCTaGAGGTGGGTGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSHPPSL*RWVGQI
Trigger: AATCTGGCCCACCCACCTGCAGAGTGACGGAGGGTG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCTGGTACCACCACCATaGGCTCTGCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSLVPPP*ALQGLQ
Trigger: CTGAAGGCCCTGCAGAGCCCATGGTGGTGGTACCAG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCTTTTCCACATCTACTaGTACCACCACCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPLFHIY*YHHHGL
Trigger: GAGCCCATGGTGGTGGTACCAGTAGATGTGGAAAAG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATTTAGCATGGGGATCTaGGGCAGGCTGTTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRFSMGI*GRLFRF
Trigger: GAAGCGGAACAGCCTGCCCCAGATCCCCATGCTAAA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTTTAGCATGGGGATCTaGGGCAGGCTGTTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPFSMGI*GRLFRF
Trigger: GAAGCGGAACAGCCTGCCCCAGATCCCCATGCTAAA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCCTCCAGGTTTAGCATaGGGATCTGGGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESPPGLA*GSGAGC
Trigger: ACAGCCTGCCCCAGATCCCCATGCTAAACCTGGAGG...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCAGCTCTCTGAGAGGTaGGACCGCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNQLSER*DRRASR
Trigger: CCTGGAGGCCCGGCGGTCCCACCTCTCAGAGAGCTG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCAGCTCTCTGAGAGGTaGGACCGCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDQLSER*DRRASR
Trigger: CCTGGAGGCCCGGCGGTCCCACCTCTCAGAGAGCTG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTGGCAATGCCATACTGTaGACCTCCGGGCCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSGNAIL*TSGPSQ
Trigger: CTGCGAAGGCCCGGAGGTCCACAGTATGGCATTGCC...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTAGCGGGGCCGGTCACTaGGGTCGTAGTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPSGAGH*GRSPSS
Trigger: GCTGCTGGGACTACGACCCCAGTGACCGGCCCCGCT...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACAGCGGGGCCGGTCACTaGGGTCGTAGTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDSGAGH*GRSPSS
Trigger: GCTGCTGGGACTACGACCCCAGTGACCGGCCCCGCT...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGCCGACCTCCTTCTCTaGCGTCAATGGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPADLLL*RQWGLI
Trigger: GATAAGTCCCCATTGACGCCAGAGAAGGAGGTCGGC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCGTGGGTGGGCCAGATTaGCCAGAACCTTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVVGGPD*PEPWPG
Trigger: ACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCAC...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTGGCTTAGGGAGCAGTaGCCAGGCAGCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHWLREQ*PGSSSP
Trigger: GGGACTGCTGCTGCCTGGCCACTGCTCCCTAAGCCA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATGGCTTAGGGAGCAGTaGCCAGGCAGCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPWLREQ*PGSSSP
Trigger: GGGACTGCTGCTGCCTGGCCACTGCTCCCTAAGCCA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATGGAAGTTGGCATCTCTaGTTTCTCCCATCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHGSWHL*FLPSAG
Trigger: GCCCGCGGATGGGAGAAACCAGAGATGCCAACTTCC...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR TCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCCTTCAGGCTCTCCATaGAGTCTTCTGGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPPSGSP*SLLASS
Trigger: GCTACTTGCCAGAAGACTTCATGGAGAGCCTGAAGG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCGCACTCCTCCTCCCTaGGCGAGGCGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHRTPPP*ARRTAG
Trigger: TCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGTGGGCTTTGCGTCCTaGCTAGTCAGCTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPVGFAS*LVSWRI
Trigger: GATCCGCCAGCTGACTAGTCAGGACGCAAAGCCCAC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCAGTACAGCACGAGGGTaGGCACCTTCAGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESSTARG*APSGSS
Trigger: AGAACTCCCTGAAGGTGCTCACCCTCGTGCTGTACT...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCCCTGTGCACGCAGTTaGTGCTCTCCAGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHPCARS*CSPGRP
Trigger: TGGCCTACCTGGAGAGCATCAACTGCGTGCACAGGG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTCTCCAGCACCCCGATaGCATCCTTGTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVSPAPR*HPCSPA
Trigger: GGCTGGAGAACAAGGATGTCATCGGGGTGCTGGAGA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCCCAGCAGCGGGTCATaGGGGTATAAAGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPPSSGS*GYKGPV
Trigger: CACCGGTCCTTTATACCCTCATGACCCGCTGCTGGG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACCTGGAAGACCCACATaGCCAACAGCAAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPPGRPT*PTARQG
Trigger: CCCCTGCCTTGCTGTTGGTCATGTGGGTCTTCCAGG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTCCTGGAAGACCCACATaGCCAACAGCAAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLPGRPT*PTARQG
Trigger: CCCCTGCCTTGCTGTTGGTCATGTGGGTCTTCCAGG...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCACTCATACTTGTCCTaGACCTCACCCACCGTCATC +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPHSYLS*TSPTVI
Trigger: GATGACGGTGGGTGAGGTGCAGGACAAGTATGAGTG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGACACTCGGCTTCCACGTaGAGACACTCATACTTGTCC +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRHSAST*RHSYLS
Trigger: GGACAAGTATGAGTGTCTGCACGTGGAAGCCGAGTG...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTGAGCGAGGCGTACTaGTGGAAGGTCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGLSEAY*WKVCWI
Trigger: GATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAG...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGCCCAGCTGAAGTACTaGCTGGCCCTCCTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHAQLKY*LALLQR
Trigger: CCGCTGGAGGAGGGCCAGGCAGTACTTCAGCTGGGC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAATGAGAGAGCCTTGGTaGTCACCCTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPMREPW*SPCSRQ
Trigger: CTGCCGGCTGCAGGGTGAGCACCAAGGCTCTCTCAT...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCATGAGAGAGCCTTGGTaGTCACCCTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPMREPW*SPCSRQ
Trigger: CTGCCGGCTGCAGGGTGAGCACCAAGGCTCTCTCAT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCAGATGTCTGACTCTATaGTGCAGCTCTCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPRCLTL*CSSLRG
Trigger: ACCTCTCAGAGAGCTGCAGCATAGAGTCAGACATCT...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTCAGGATCTCCCACATaGACACGGCGAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPSGSPT*TRRTSR
Trigger: TCTGGATGTTCGCCGTGTGCATGTGGGAGATCCTGA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTGGAGAGGTGGGGTGTaGAGTGAGTTAACGGGAGAT +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPWRGGV*SELTGD
Trigger: ATCTCCCGTTAACTCACTGCACACCCCACCTCTCCA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCGTTTGAAGACATTGTaGCGGTGGAGAGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESRLKTL*RWRGGV
Trigger: CACCCCACCTCTCCACCGGCACAATGTCTTCAAACG...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR GCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGAGGTCACGGCGTTCTaGTGTGCCAGCCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPEVTAF*CASRIL
Trigger: CAAGATGCGGCTGGCACAGCAGAACGCCGTGACCTC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAGAAGCCGTCAGCATCTaGCTCTTGCACTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGREAVSI*LLHSSL
Trigger: AAGTGAGGAGTGCAAGAGGCAGATGCTGACGGCTTC...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCACCCTCCGTCACTCTaGAGGTGGGTGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHHPPSL*RWVGQI
Trigger: AATCTGGCCCACCCACCTGCAGAGTGACGGAGGGTG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTCCCCTCTGTCCAGCTaGAGCCTGAGCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPSPLSS*SLSSTA
Trigger: GGCTGTACTGCTCAGGCTGCAGCTGGACAGAGGGGA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTCCCCTCTGTCCAGCTaGAGCCTGAGCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLSPLSS*SLSSTA
Trigger: GGCTGTACTGCTCAGGCTGCAGCTGGACAGAGGGGA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCCTCATCTCACTGGCTaGCTGACCCCCAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPPHLTG*LTPKTK
Trigger: CTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCCTCAGGAGGGCACATaGTGTCAGTCCAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHPQEGT*CQSRPN
Trigger: GTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCTGGTACCACCACCATaGGCTCTGCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHLVPPP*ALQGLQ
Trigger: CTGAAGGCCCTGCAGAGCCCATGGTGGTGGTACCAG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTCCCGGATCTCCGTCTaGACAGTGCATTTGACCAGT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSRISV*TVHLTS
Trigger: ACTGGTCAAATGCACTGTCCAGACGGAGATCCGGGA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCAGCCAACCGGATGTTaGGCCCGATCCGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPQPTGC*ARSARS
Trigger: TGAGCGGGCGGATCGGGCCCAACATCCGGTTGGCTG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCAGCCAACCGGATGTTaGGCCCGATCCGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHQPTGC*ARSARS
Trigger: TGAGCGGGCGGATCGGGCCCAACATCCGGTTGGCTG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTACCCACCGTCATCTGTaGGTGCAGCCAGTGGATCTC +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGTHRHL*VQPVDL
Trigger: GAGATCCACTGGCTGCACCCACAGATGACGGTGGGT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCAGCGAGGCGTACTGCTaGAAGGTCTGCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESSEAYC*KVCWII
Trigger: GATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCT...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTCTCCTGGTCGATGTTaGCGAAGCCGGCGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVSPGRC*RSRREC
Trigger: ACACTCTCGCCGGCTTCGCCAACATCGACCAGGAGA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTATGATGAGAGAGCCTTaGTGCTCACCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGMMREP*CSPCSR
Trigger: CCGGCTGCAGGGTGAGCACCAAGGCTCTCTCATCAT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATGACAGAGATCAGGCTTaGGCAGCCGGTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHDRDQA*AAGLLS
Trigger: AGAAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTC...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGGTATAAAGGACCGGTaGACAGAGATCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPGIKDR*TEIRLG
Trigger: CCCAAGCCTGATCTCTGTCCACCGGTCCTTTATACC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGACCCTCAGGAACCTaGAACTGCAGCTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHRPSGT*NCSFGA
Trigger: GGCTCCAAAGCTGCAGTTCCAGGTTCCTGAGGGTCT...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTCTCGGCTGCTGGGTTaGATGAAGTCCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHSRLLG*MKSSSR
Trigger: GCGGGAGGAGGACTTCATCCAACCCAGCAGCCGAGA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAAGGTTAGCTGTGGGCTaGATGGACTGTGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPRLAVG*MDCAPS
Trigger: GCTGGGCGCACAGTCCATCCAGCCCACAGCTAACCT...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTGATTGGCCAGAACCTTaGCCTGGTCCACAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGDWPEP*PGPQRR
Trigger: TCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATC...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTGGGTGGGCCAGATTaGCCAGAACCTTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHVGGPD*PEPWPG
Trigger: ACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCAC...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCCTTGGCCTTCCCCCTaGAAGACCCACATGACCAAC +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVPWPSP*KTHMTN
Trigger: GTTGGTCATGTGGGTCTTCCAGGGGGAAGGCCAAGG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGACAATTAGCTTGTTCCTaGACTGTGCCCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRQLACS*TVPQVL
Trigger: GAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTG...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTTCTCGGCTGCTGGGTTaGATGAAGTCCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSSRLLG*MKSSSW
Trigger: CCAGGAGGAGGACTTCATCCAACCCAGCAGCCGAGA...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTATAGAAGCAGACCTTaGGGATACGCACGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPYRSRP*GYARPP
Trigger: AGGAGGACGTGCGTATCCTCAAGGTCTGCTTCTATA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCCTTCAGGCTCTCCATaGAGTCTTCTGGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHPSGSP*SLLASS
Trigger: GCTACTTGCCAGAAGACTTCATGGAGAGCCTGAAGG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTGGGCTCCTCTTCAATaGTGCCGATCAGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESWAPLQ*CRSASR
Trigger: TCGTGAAGCTGATCGGCATCATTGAAGAGGAGCCCA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTTTGCATATCTGCAGTaGGTACAGCACGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPFAYLQ*VQHEGE
Trigger: CTCACCCTCGTGCTGTACTCACTGCAGATATGCAAA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTTTGCATATCTGCAGTaGGTACAGCACGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPFAYLQ*VQHEGE
Trigger: CTCACCCTCGTGCTGTACTCACTGCAGATATGCAAA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTGCATGCTGTGGCGTTTaGAGACATTGTGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGACCGV*RHCAGG
Trigger: TCCACCGGCACAATGTCTTCAAACGCCACAGCATGC...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR TCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGGATTTGCCGCATTTTaGCCTTTTCAGCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPGFAAF*PFQPPT
Trigger: TGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAACTTCTCCTCCTGCCTaGGCCACTGGTAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPTSPPA*ATGSPP
Trigger: TGGAGGACTACCAGTGGCTCAGGCAGGAGGAGAAGT...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCTGCCAGGTCTTTGTTaGGCAGTTTCTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSLPGLC*AVSGCP
Trigger: AGGGCACCCAGAAACTGCTCAACAAAGACCTGGCAG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAGTGGCAAGGGAAGGTaGCTCCCCTTGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNSGKGR*LPLAFP
Trigger: GGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACT...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGCATCAAGGGACATCTaGGGGCCGAAGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHASRDI*GPKRKG
Trigger: TCCCTTCCTCTTCGGCCCTCAGATGTCCCTTGATGC...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCAGGCCGGCGTAACGTaGCCAACTTTACTCGACTCA +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVQAGVT*PTLLDS
Trigger: TGAGTCGAGTAAAGTTGGGCACGTTACGCCGGCCTG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCACTCATACTTGTCCTaGACCTCACCCACCGTCATC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHHSYLS*TSPTVI
Trigger: GATGACGGTGGGTGAGGTGCAGGACAAGTATGAGTG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACTGAGCGAGGCGTACTaGTGGAAGGTCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLSEAY*WKVCWI
Trigger: GATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCTGAGCGAGGCGTACTaGTGGAAGGTCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHLSEAY*WKVCWI
Trigger: GATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCTGATGGACCTGATCTaGTTGAACTCGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSLMDLI*LNSARQ
Trigger: CTGCCTGGCCGAGTTCAAGCAGATCAGGTCCATCAG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCATCTTCACGGGCAATaGCATACTGTGGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSHLHGQ*HTVDLR
Trigger: CCGGAGGTCCACAGTATGGCATTGCCCGTGAAGATG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTCAGGATCTCCCACATaGACACGGCGAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESSGSPT*TRRTSR
Trigger: TCTGGATGTTCGCCGTGTGCATGTGGGAGATCCTGA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTCAGGATCTCCCACATaGACACGGCGAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHSGSPT*TRRTSR
Trigger: TCTGGATGTTCGCCGTGTGCATGTGGGAGATCCTGA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTCAGCCTCCCACAGCTaGTGGGCCTCTTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHSASHS*WASSRL
Trigger: CAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATGAAGCCGTCAGCATCTaGCTCTTGCACTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHEAVSI*LLHSSL
Trigger: AAGTGAGGAGTGCAAGAGGCAGATGCTGACGGCTTC...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCCTCATCTCACTGGCTaGCTGACCCCCAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHPHLTG*LTPKTK
Trigger: CTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCCAACACAGCATCCTGTaGCTGGACTCCCAATTAGCT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPQHSIL*LDSQLA
Trigger: AGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGACAACACAGCATCCTGTaGCTGGACTCCCAATTAGCT +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRQHSIL*LDSQLA
Trigger: AGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTCCTCCTCCTGGAACTaGAGCTTTGGAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLSSSWN*SFGARR
Trigger: CCTCCTGGCTCCAAAGCTGCAGTTCCAGGAGGAGGA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCGGCACATTGCAGTCCTaGAGAGACAGCAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVGTLQS*RDSRGS
Trigger: TGACCCTCTGCTGTCTCTGCAGGACTGCAATGTGCC...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTCCCGGATCTCCGTCTaGACAGTGCATTTGACCAGT +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHSRISV*TVHLTS
Trigger: ACTGGTCAAATGCACTGTCCAGACGGAGATCCGGGA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTGTGGGTGCAGCCAGTaGATCTCATCGGACTTCATG +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHCGCSQ*ISSDFM
Trigger: CATGAAGTCCGATGAGATCCACTGGCTGCACCCACA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTGTGGGTGCAGCCAGTaGATCTCATCGGACTTCATG +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESCGCSQ*ISSDFM
Trigger: CATGAAGTCCGATGAGATCCACTGGCTGCACCCACA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAAAAAATAGAGCAGCGTaGTCCTGTCCTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRKNRAA*SCPPSG
Trigger: GCCTGAAGGAGGACAGGACCACGCTGCTCTATTTTT...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTAGCGAGGCGTACTGCTaGAAGGTCTGCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSSEAYC*KVCWII
Trigger: GATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCT...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTCTCCTGGTCGATGTTaGCGAAGCCGGCGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLSPGRC*RSRREC
Trigger: ACACTCTCGCCGGCTTCGCCAACATCGACCAGGAGA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTTGATGGACAAGGCCTaGGGGGCACCTTCAATGCCC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHLMDKA*GAPSMP
Trigger: GGGCATTGAAGGTGCCCCCCAGGCCTTGTCCATCAA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAATGATGAGAGAGCCTTaGTGCTCACCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPMMREP*CSPCSR
Trigger: CCGGCTGCAGGGTGAGCACCAAGGCTCTCTCATCAT...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTTCACGATGTGCGGGTaGTCGAGGTTCTTCATGATC +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPFTMCG*SRFFMI
Trigger: GATCATGAAGAACCTCGACCACCCGCACATCGTGAA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATTCACGATGTGCGGGTaGTCGAGGTTCTTCATGATC +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRFTMCG*SRFFMI
Trigger: GATCATGAAGAACCTCGACCACCCGCACATCGTGAA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTCTCCAGGTAGGCCATaGCTTTGCATATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPSPGRP*LCISAV
Trigger: CACTGCAGATATGCAAAGCCATGGCCTACCTGGAGA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATCTCCAGGTAGGCCATaGCTTTGCATATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRSPGRP*LCISAV
Trigger: CACTGCAGATATGCAAAGCCATGGCCTACCTGGAGA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATTGGAGCCAGGAGGTTaGTTTGCGGAGGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLEPGG*FAEGVC
Trigger: ACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCATTCATATAAACCATaGGGTCCAGGGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ERASCKVAREGDSPWPSPHSYKP*GPGTSP
Trigger: AGGAGAAGTCCCTGGACCCCATGGTTTATATGAATG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGCCAGAACCTTGGCCTaGTCCACAGCGTCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPARTLA*STASSR
Trigger: CCTGCTCGACGCTGTGGACCAGGCCAAGGTTCTGGC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGATTGGCCAGAACCTTaGCCTGGTCCACAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHDWPEP*PGPQRR
Trigger: TCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATC...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCCGTCACTCTGCAGGTaGGTGGGCCAGATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDPSLCR*VGQIGQ
Trigger: CTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCGGGAAAGGAATAGCTTaGTTCCCAAATCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESGKGIA*FPNRPA
Trigger: GGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCC...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCCCAAGGTCCTATCTTaGCCGCATCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESPKVLS*PHLSAS
Trigger: AGAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGG...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTCTCGGCTGCTGGGTTaGATGAAGTCCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPSRLLG*MKSSSW
Trigger: CCAGGAGGAGGACTTCATCCAACCCAGCAGCCGAGA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
3UTR CAA 72 bp ACAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTaGTTCCTGGACTGTGCCCCAGGTCCTCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TTQHPVPGLPIS*FLDCAPGPPSG
Trigger: TCCTGAGGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGGGCCATGCCCTCGCTaGCCTTGCTGGCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLGPCPR*PCWRSA
Trigger: AGCGCTACGCCAGCAAGGTCAGCGAGGGCATGGCCC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGTGGGCTTTGCGTCCTaGCTAGTCAGCTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNVGFAS*LVSWRI
Trigger: GATCCGCCAGCTGACTAGTCAGGACGCAAAGCCCAC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCGGCAGTAGCCGTCTATaGGGTCAGCCATGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPGSSRL*GQPCSQ
Trigger: CTGAGAACATGGCTGACCTCATAGACGGCTACTGCC...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTGGGCTCCTCTTCAATaGTGCCGATCAGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVWAPLQ*CRSASR
Trigger: TCGTGAAGCTGATCGGCATCATTGAAGAGGAGCCCA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCCCTGTGCACGCAGTTaGTGCTCTCCAGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDPCARS*CSPGRP
Trigger: TGGCCTACCTGGAGAGCATCAACTGCGTGCACAGGG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACTGGGGACATCCATTTaGTGGGGAGACGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLGTSI*WGDESQ
Trigger: CTGTGACTCGTCTCCCCATCAAATGGATGTCCCCAG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCCCAGCAGCGGGTCATaGGGGTATAAAGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHPSSGS*GYKGPV
Trigger: CACCGGTCCTTTATACCCTCATGACCCGCTGCTGGG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTAGGTGGGGTGTGCAGTaGGTTAACGGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSRWGVQ*VNGRWI
Trigger: TATCCATCTCCCGTTAACTCACTGCACACCCCACCT...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR TCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTGCATGCTGTGGCGTTTaGAGACATTGTGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLACCGV*RHCAGG
Trigger: TCCACCGGCACAATGTCTTCAAACGCCACAGCATGC...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR TCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGACAGAGCTCATTCTTaGGCTCCAGCACGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPDRAHS*APARPA
Trigger: TGCGGGCCGTGCTGGAGCTCAAGAATGAGCTCTGTC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCCTGGAAGACCCACATaGCCAACAGCAAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDPGRPT*PTARQG
Trigger: CCCCTGCCTTGCTGTTGGTCATGTGGGTCTTCCAGG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATTGTCCAGCTGCAGCCTaGGCAGTACAGCCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNCPAAA*AVQPGV
Trigger: TACCCCTGGCTGTACTGCTCAGGCTGCAGCTGGACA...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGCAGCAGTCCCCCTCTaGGCCATCTTTGTCACCGTC +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPAAVPL*AIFVTV
Trigger: GACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATACCGTCATCTGTGGGTaGAGCCAGTGGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHTVICG*SQWISS
Trigger: CGATGAGATCCACTGGCTGCACCCACAGATGACGGT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCACTCATACTTGTCCTaGACCTCACCCACCGTCATC +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVHSYLS*TSPTVI
Trigger: GATGACGGTGGGTGAGGTGCAGGACAAGTATGAGTG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCTGATGGACCTGATCTaGTTGAACTCGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPLMDLI*LNSARQ
Trigger: CTGCCTGGCCGAGTTCAAGCAGATCAGGTCCATCAG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACTGATGGACCTGATCTaGTTGAACTCGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLMDLI*LNSARQ
Trigger: CTGCCTGGCCGAGTTCAAGCAGATCAGGTCCATCAG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCGGTAGGCCATGGCTTTaGATATCTGCAGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPGRPWL*ISAVST
Trigger: TGTACTCACTGCAGATATGCAAAGCCATGGCCTACC...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTACAGCAATGTCCCTGTaGACGCAGTTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGTAMSL*TQLMLS
Trigger: GGAGAGCATCAACTGCGTGCACAGGGACATTGCTGT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTGCCAGGAGGTTGGTTTaGGGAGGGGGTCTGTACTTA +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLARRLV*GGGLYL
Trigger: TAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGC...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTCCACCATCTGCTTCTaGTGTTTGTCCAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPSTICF*CLSRIC
Trigger: GCAAATCCTGGACAAACAGCAGAAGCAGATGGTGGA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGAGGTCACGGCGTTCTaGTGTGCCAGCCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHEVTAF*CASRIL
Trigger: CAAGATGCGGCTGGCACAGCAGAACGCCGTGACCTC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCACCCTCCGTCACTCTaGAGGTGGGTGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNHPPSL*RWVGQI
Trigger: AATCTGGCCCACCCACCTGCAGAGTGACGGAGGGTG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGGGGAGAGGGCGTCGTaGAAAGTGGCAAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDGERAS*KVAREG
Trigger: ACCTTCCCTTGCCACTTTGCACGACGCCCTCTCCCC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTCCCCAGCTTCTCTGTaGATCAAGGGACATCTGAGG +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVSPASL*IKGHLR
Trigger: CCTCAGATGTCCCTTGATGCACAGAGAAGCTGGGGA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTTTGGCCGCATCTCTCTaGTTCTTCCCCCTGATGCTT +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGLAASL*FFPLML
Trigger: AAGCATCAGGGGGAAGAAGCAGAGAGATGCGGCCAA...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAAACCCTGGCTCATATTaGTCTTCAAACAAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRNPGSY*SSNKPR
Trigger: ACGGGGCTTGTTTGAAGAGCAATATGAGCCAGGGTT...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCTCCTGCATCTGCTTTaGGAAAAACAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESLLHLL*EKQVQP
Trigger: GGGCTGGACTTGTTTTTCCCAAAGCAGATGCAGGAG...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCTCCTGCATCTGCTTTaGGAAAAACAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHLLHLL*EKQVQP
Trigger: GGGCTGGACTTGTTTTTCCCAAAGCAGATGCAGGAG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTGCTGGAAGGTCTGCTaGATCATCTTCCGGAACTGT +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHCWKVC*IIFRNC
Trigger: ACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATTTAGCATGGGGATCTaGGGCAGGCTGTTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPFSMGI*GRLFRF
Trigger: GAAGCGGAACAGCCTGCCCCAGATCCCCATGCTAAA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGGCAATGCCATACTGTaGACCTCCGGGCCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPGNAIL*TSGPSQ
Trigger: CTGCGAAGGCCCGGAGGTCCACAGTATGGCATTGCC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTCTCCAGGTAGGCCATaGCTTTGCATATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHSPGRP*LCISAV
Trigger: CACTGCAGATATGCAAAGCCATGGCCTACCTGGAGA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTGGTATAAAGGACCGGTaGACAGAGATCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSGIKDR*TEIRLG
Trigger: CCCAAGCCTGATCTCTGTCCACCGGTCCTTTATACC...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATCCTCTCTTGCTCCATaGCAATGTCCTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRSSLAP*QCPSPS
Trigger: AGATGGAGAAGGACATTGCCATGGAGCAAGAGAGGA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTTGTTGAGCAGTTTCTaGGTGCCCTCGATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHLLSSF*VPSISV
Trigger: GACAGAGATCGAGGGCACCCAGAAACTGCTCAACAA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGTGGGTGGGCCAGATTaGCCAGAACCTTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDVGGPD*PEPWPG
Trigger: ACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCAC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCACTCTGCAGGTGGGTaGGCCAGATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPHSAGG*ARLART
Trigger: GGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCAATTAGCTTGTTCCTaGACTGTGCCCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVQLACS*TVPQVL
Trigger: GAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCCAAGGTCCTATCTTaGCCGCATCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGPKVLS*PHLSAS
Trigger: AGAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGG...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCGGCTCCGGAGGCTGTaGCTGGATCAGAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDRLRRL*LDQKKE
Trigger: CTCCTTCTTCTGATCCAGCCACAGCCTCCGGAGCCG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCATGAAGTCCTCCTCCTaGAACTGCAGCTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVMKSSS*NCSFGA
Trigger: GGCTCCAAAGCTGCAGTTCCAGGAGGAGGACTTCAT...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTATAGAAGCAGACCTTaGGGATACGCACGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVYRSRP*GYARPP
Trigger: AGGAGGACGTGCGTATCCTCAAGGTCTGCTTCTATA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTTCACTGCCTCGCTCATaGACTTCTCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSSLPRS*TSPCCP
Trigger: TGGACAACAAGGAGAAGTTCATGAGCGAGGCAGTGA...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACTCTCCAGCACCCCGATaGCATCCTTGTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDSPAPR*HPCSPA
Trigger: GGCTGGAGAACAAGGATGTCATCGGGGTGCTGGAGA...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTGCACACCAGCTCGGTaGAGCGGGGCCGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFCTPAR*SGAGHW
Trigger: CCAGTGACCGGCCCCGCTTCACCGAGCTGGTGTGCA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATAGGTGGGGTGTGCAGTaGGTTAACGGGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHRWGVQ*VNGRWI
Trigger: TATCCATCTCCCGTTAACTCACTGCACACCCCACCT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATACTTCTCCTCCTGCCTaGGCCACTGGTAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNTSPPA*ATGSPP
Trigger: TGGAGGACTACCAGTGGCTCAGGCAGGAGGAGAAGT...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGCATCAAGGGACATCTaGGGGCCGAAGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDASRDI*GPKRKG
Trigger: TCCCTTCCTCTTCGGCCCTCAGATGTCCCTTGATGC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCACTCGGCTTCCACGTaGAGACACTCATACTTGTCC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHHSAST*RHSYLS
Trigger: GGACAAGTATGAGTGTCTGCACGTGGAAGCCGAGTG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTGTCTGACTCTATGCTaGAGCTCTCTGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLCLTLC*SSLRGG
Trigger: CCCACCTCTCAGAGAGCTGCAGCATAGAGTCAGACA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCATGGCTTTGCATATCTaGAGTGAGTACAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESMALHI*SEYSTR
Trigger: CCTCGTGCTGTACTCACTGCAGATATGCAAAGCCAT...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATATGGCTTTGCATATCTaGAGTGAGTACAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHMALHI*SEYSTR
Trigger: CCTCGTGCTGTACTCACTGCAGATATGCAAAGCCAT...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCACAGCAATGTCCCTGTaGACGCAGTTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPTAMSL*TQLMLS
Trigger: GGAGAGCATCAACTGCGTGCACAGGGACATTGCTGT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGAAGCCGTCAGCATCTaGCTCTTGCACTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPEAVSI*LLHSSL
Trigger: AAGTGAGGAGTGCAAGAGGCAGATGCTGACGGCTTC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTCCCCAGCTTCTCTGTaGATCAAGGGACATCTGAGG +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHSPASL*IKGHLR
Trigger: CCTCAGATGTCCCTTGATGCACAGAGAAGCTGGGGA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTTGGCCGCATCTCTCTaGTTCTTCCCCCTGATGCTT +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPLAASL*FFPLML
Trigger: AAGCATCAGGGGGAAGAAGCAGAGAGATGCGGCCAA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATTGGCCGCATCTCTCTaGTTCTTCCCCCTGATGCTT +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLAASL*FFPLML
Trigger: AAGCATCAGGGGGAAGAAGCAGAGAGATGCGGCCAA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTAAGATCGGCACATTaGAGTCCTGCAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVLRSAH*SPAETA
Trigger: TGCTGTCTCTGCAGGACTGCAATGTGCCGATCTTAG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATCCCGGATCTCCGTCTaGACAGTGCATTTGACCAGT +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPSRISV*TVHLTS
Trigger: ACTGGTCAAATGCACTGTCCAGACGGAGATCCGGGA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTGTGGGTGCAGCCAGTaGATCTCATCGGACTTCATG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPCGCSQ*ISSDFM
Trigger: CATGAAGTCCGATGAGATCCACTGGCTGCACCCACA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATACCCACCGTCATCTGTaGGTGCAGCCAGTGGATCTC +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHTHRHL*VQPVDL
Trigger: GAGATCCACTGGCTGCACCCACAGATGACGGTGGGT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCTCCATGAAGTCTTCTaGCAAGTAGCGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPLHEVF*QVADLK
Trigger: CTTCAAATCCGCTACTTGCCAGAAGACTTCATGGAG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTGCTGGAAGGTCTGCTaGATCATCTTCCGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVCWKVC*IIFRNC
Trigger: ACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTTGCTGGAAGGTCTGCTaGATCATCTTCCGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSCWKVC*IIFRNC
Trigger: ACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCA...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTCTCCTGGTCGATGTTaGCGAAGCCGGCGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPSPGRC*RSRREC
Trigger: ACACTCTCGCCGGCTTCGCCAACATCGACCAGGAGA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTTGATGGACAAGGCCTaGGGGGCACCTTCAATGCCC +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHLMDKA*GAPSMP
Trigger: GGGCATTGAAGGTGCCCCCCAGGCCTTGTCCATCAA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATTTGATGGACAAGGCCTaGGGGGCACCTTCAATGCCC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNLMDKA*GAPSMP
Trigger: GGGCATTGAAGGTGCCCCCCAGGCCTTGTCCATCAA...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATATGATGAGAGAGCCTTaGTGCTCACCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHMMREP*CSPCSR
Trigger: CCGGCTGCAGGGTGAGCACCAAGGCTCTCTCATCAT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCCTCCAGGTTTAGCATaGGGATCTGGGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNPPGLA*GSGAGC
Trigger: ACAGCCTGCCCCAGATCCCCATGCTAAACCTGGAGG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTTCACGATGTGCGGGTaGTCGAGGTTCTTCATGATC +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVFTMCG*SRFFMI
Trigger: GATCATGAAGAACCTCGACCACCCGCACATCGTGAA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGAAGTTAATGGACTCTaGGGACATCCATTTGATGGG +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPEVNGL*GHPFDG
Trigger: CCCATCAAATGGATGTCCCCAGAGTCCATTAACTTC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTGGGCTCCAAGATTTTaGGGGTTCGGTAGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLWAPRF*GFGSEH
Trigger: ATGCTCGCTACCGAACCCCCAAAATCTTGGAGCCCA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTGGGCTCCAAGATTTTaGGGGTTCGGTAGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPWAPRF*GFGSEH
Trigger: ATGCTCGCTACCGAACCCCCAAAATCTTGGAGCCCA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTTGGAGCCAGGAGGTTaGTTTGCGGAGGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPLEPGG*FAEGVC
Trigger: ACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCCATTCATATAAACCATaGGGTCCAGGGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPHSYKP*GPGTSP
Trigger: AGGAGAAGTCCCTGGACCCCATGGTTTATATGAATG...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCCTCGGGGGCTTCTGTaGGGGCCCTGTGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLPRGLL*GPCELQ
Trigger: CTGGAGTTCACAGGGCCCCCACAGAAGCCCCCGAGG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTTTGTTGAGCAGTTTCTaGGTGCCCTCGATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSLLSSF*VPSISV
Trigger: GACAGAGATCGAGGGCACCCAGAAACTGCTCAACAA...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGATTGGCCAGAACCTTaGCCTGGTCCACAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHDWPEP*PGPQRR
Trigger: TCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCCTTGGCCTTCCCCCTaGAAGACCCACATGACCAAC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNPWPSP*KTHMTN
Trigger: GTTGGTCATGTGGGTCTTCCAGGGGGAAGGCCAAGG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCCTTGGCCTTCCCCCTaGAAGACCCACATGACCAAC +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDPWPSP*KTHMTN
Trigger: GTTGGTCATGTGGGTCTTCCAGGGGGAAGGCCAAGG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCTTCCCCCTGATGCTTaGTTTGTTGACAACACAGCA +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESLPPDA*FVDNTA
Trigger: TGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAG...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGGAAGAGAGCGGATTTaGCCCAAGGTCCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHGRERI*PKVLSW
Trigger: CCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCC...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCGGAAGAGAGCGGATTTaGCCCAAGGTCCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPGRERI*PKVLSW
Trigger: CCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCC...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACTATTCAGTTCCGCATaGCTGGCGAGGCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLFSSA*LARPQK
Trigger: TTTCTGAGGCCTCGCCAGCCATGCGGAACTGAATAG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATATGAAGTCCTCCTCCTaGAACTGCAGCTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHMKSSS*NCSFGA
Trigger: GGCTCCAAAGCTGCAGTTCCAGGAGGAGGACTTCAT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTTCGGGCACCGCCAGGTaGGCCGGGACGGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTSGTAR*AGTAAS
Trigger: ACTTGCCGCCGTCCCGGCTCACCTGGCGGTGCCCGA...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
CDS-3UTR TCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGGCAGTAGCCGTCTATaGGGTCAGCCATGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDGSSRL*GQPCSQ
Trigger: CTGAGAACATGGCTGACCTCATAGACGGCTACTGCC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGGCAGTAGCCGTCTATaGGGTCAGCCATGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNGSSRL*GQPCSQ
Trigger: CTGAGAACATGGCTGACCTCATAGACGGCTACTGCC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTCACTGCCTCGCTCATaGACTTCTCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHSLPRS*TSPCCP
Trigger: TGGACAACAAGGAGAAGTTCATGAGCGAGGCAGTGA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATAGTACAGCACGAGGGTaGGCACCTTCAGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHSTARG*APSGSS
Trigger: AGAACTCCCTGAAGGTGCTCACCCTCGTGCTGTACT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTTTGCATATCTGCAGTaGGTACAGCACGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPFAYLQ*VQHEGE
Trigger: CTCACCCTCGTGCTGTACTCACTGCAGATATGCAAA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCTGGGGACATCCATTTaGTGGGGAGACGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNLGTSI*WGDESQ
Trigger: CTGTGACTCGTCTCCCCATCAAATGGATGTCCCCAG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATATCTCACTGGCTGCCTaGCCCCCAAAACAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHISLAA*PPKQSS
Trigger: GGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGAT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACACCGTCATCTGTGGGTaGAGCCAGTGGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDTVICG*SQWISS
Trigger: CGATGAGATCCACTGGCTGCACCCACAGATGACGGT...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCAAGTTCTCCTGCATCTaGTTTGGGAAAAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPKFSCI*FGKNKS
Trigger: GGACTTGTTTTTCCCAAAGCAGATGCAGGAGAACTT...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCAAGTTCTCCTGCATCTaGTTTGGGAAAAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPKFSCI*FGKNKS
Trigger: GGACTTGTTTTTCCCAAAGCAGATGCAGGAGAACTT...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCGGCTTTAAGTTCTCCTaGATCTGCTTTGGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPGFKFS*ICFGKN
Trigger: GTTTTTCCCAAAGCAGATGCAGGAGAACTTAAAGCC...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTACTGCTGGAAGGTCTaGTGGATCATCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHYCWKV*WIIFRN
Trigger: GTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTACTGCTGGAAGGTCTaGTGGATCATCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPYCWKV*WIIFRN
Trigger: GTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCTGATGGACCTGATCTaGTTGAACTCGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDLMDLI*LNSARQ
Trigger: CTGCCTGGCCGAGTTCAAGCAGATCAGGTCCATCAG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCATCTTCACGGGCAATaGCATACTGTGGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHHLHGQ*HTVDLR
Trigger: CCGGAGGTCCACAGTATGGCATTGCCCGTGAAGATG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCATCTTCACGGGCAATaGCATACTGTGGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDHLHGQ*HTVDLR
Trigger: CCGGAGGTCCACAGTATGGCATTGCCCGTGAAGATG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTTGTTGTCCAGAGTaGAGTCTTTCTTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSPCCPE*SLSCRS
Trigger: AGACCTGCAAGAAAGACTGCACTCTGGACAACAAGG...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGCCAGGAGGTTGGTTTaGGGAGGGGGTCTGTACTTA +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDARRLV*GGGLYL
Trigger: TAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGCCAGGAGGTTGGTTTaGGGAGGGGGTCTGTACTTA +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHARRLV*GGGLYL
Trigger: TAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCAAATGTCCTTTCAGCTaGTGGACTCTTCCATTTGGA +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPKCPFS*WTLPFG
Trigger: TCCAAATGGAAGAGTCCAGCAGCTGAAAGGACATTT...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATCTCCATGAAGTCTTCTaGCAAGTAGCGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHLHEVF*QVADLK
Trigger: CTTCAAATCCGCTACTTGCCAGAAGACTTCATGGAG...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCAAAAATAGAGCAGCGTaGTCCTGTCCTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPKNRAA*SCPPSG
Trigger: GCCTGAAGGAGGACAGGACCACGCTGCTCTATTTTT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTAAAAATAGAGCAGCGTaGTCCTGTCCTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLKNRAA*SCPPSG
Trigger: GCCTGAAGGAGGACAGGACCACGCTGCTCTATTTTT...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTGCTGGAAGGTCTGCTaGATCATCTTCCGGAACTGT +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLCWKVC*IIFRNC
Trigger: ACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAGCGAGGCGTACTGCTaGAAGGTCTGCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNSEAYC*KVCWII
Trigger: GATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCT...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCCATCTTTCCTAGGATaGATGATGAGAGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVPSFLG*MMREPW
Trigger: CCAAGGCTCTCTCATCATCCATCCTAGGAAAGATGG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTCTCCAGGTAGGCCATaGCTTTGCATATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLSPGRP*LCISAV
Trigger: CACTGCAGATATGCAAAGCCATGGCCTACCTGGAGA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGACAGAGATCAGGCTTaGGCAGCCGGTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHDRDQA*AAGLLS
Trigger: AGAAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGACAGAGATCAGGCTTaGGCAGCCGGTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNDRDQA*AAGLLS
Trigger: AGAAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGTTCCTGGAAGGCTGTaGGCTCCAAGATTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPVPGRL*APRFWG
Trigger: CCCCCAAAATCTTGGAGCCCACAGCCTTCCAGGAAC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACAGACCCTCAGGAACCTaGAACTGCAGCTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDRPSGT*NCSFGA
Trigger: GGCTCCAAAGCTGCAGTTCCAGGTTCCTGAGGGTCT...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGCCGACCTCCTTCTCTaGCGTCAATGGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDADLLL*RQWGLI
Trigger: GATAAGTCCCCATTGACGCCAGAGAAGGAGGTCGGC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGCCAGAACCTTGGCCTaGTCCACAGCGTCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLARTLA*STASSR
Trigger: CCTGCTCGACGCTGTGGACCAGGCCAAGGTTCTGGC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATCGGAAGCAGGAAGTTaGCATCTCTGGTTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPSEAGS*HLWFLP
Trigger: TGGGAGAAACCAGAGATGCCAACTTCCTGCTTCCGA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTCCGGAGGCTGTGGCTaGATCAGAAGAAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHSGGCG*IRRRRK
Trigger: TTTTCTCCTTCTTCTGATCCAGCCACAGCCTCCGGA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR TCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCAGTTTTTCCCAGGATTaGAGCTGTTGCTATAGAAGC +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESSFSQD*SCCYRS
Trigger: GCTTCTATAGCAACAGCTTCAATCCTGGGAAAAACT...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGTTTTTCCCAGGATTaGAGCTGTTGCTATAGAAGC +
Preference number: 4 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHSFSQD*SCCYRS
Trigger: GCTTCTATAGCAACAGCTTCAATCCTGGGAAAAACT...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCCTTCAGGCTCTCCATaGAGTCTTCTGGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNPSGSP*SLLASS
Trigger: GCTACTTGCCAGAAGACTTCATGGAGAGCCTGAAGG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCCTTCAGGCTCTCCATaGAGTCTTCTGGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHPSGSP*SLLASS
Trigger: GCTACTTGCCAGAAGACTTCATGGAGAGCCTGAAGG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTGGGCTCCTCTTCAATaGTGCCGATCAGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPWAPLQ*CRSASR
Trigger: TCGTGAAGCTGATCGGCATCATTGAAGAGGAGCCCA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATTGGGCTCCTCTTCAATaGTGCCGATCAGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNWAPLQ*CRSASR
Trigger: TCGTGAAGCTGATCGGCATCATTGAAGAGGAGCCCA...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCCCTGTGCACGCAGTTaGTGCTCTCCAGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLPCARS*CSPGRP
Trigger: TGGCCTACCTGGAGAGCATCAACTGCGTGCACAGGG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGACAGAGCTCATTCTTaGGCTCCAGCACGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLDRAHS*APARPA
Trigger: TGCGGGCCGTGCTGGAGCTCAAGAATGAGCTCTGTC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTGTCCAGCTGCAGCCTaGGCAGTACAGCCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLCPAAA*AVQPGV
Trigger: TACCCCTGGCTGTACTGCTCAGGCTGCAGCTGGACA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCACTCGGCTTCCACGTaGAGACACTCATACTTGTCC +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPHSAST*RHSYLS
Trigger: GGACAAGTATGAGTGTCTGCACGTGGAAGCCGAGTG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCGGACTTCTTGTCAAGTaGATTGTGGGGCATATCCTT +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVGLLVK*IVGHIL
Trigger: AAGGATATGCCCCACAATGCACTTGACAAGAAGTCC...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCGGCTTTAAGTTCTCCTaGATCTGCTTTGGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESGFKFS*ICFGKN
Trigger: GTTTTTCCCAAAGCAGATGCAGGAGAACTTAAAGCC...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTGTCTGACTCTATGCTaGAGCTCTCTGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPCLTLC*SSLRGG
Trigger: CCCACCTCTCAGAGAGCTGCAGCATAGAGTCAGACA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTGTCTGACTCTATGCTaGAGCTCTCTGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHCLTLC*SSLRGG
Trigger: CCCACCTCTCAGAGAGCTGCAGCATAGAGTCAGACA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAAGATGTCTGACTCTATaGTGCAGCTCTCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPRCLTL*CSSLRG
Trigger: ACCTCTCAGAGAGCTGCAGCATAGAGTCAGACATCT...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATAGATGTCTGACTCTATaGTGCAGCTCTCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHRCLTL*CSSLRG
Trigger: ACCTCTCAGAGAGCTGCAGCATAGAGTCAGACATCT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCCTTGTTGTCCAGAGTaGAGTCTTTCTTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHPCCPE*SLSCRS
Trigger: AGACCTGCAAGAAAGACTGCACTCTGGACAACAAGG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATATGGCTTTGCATATCTaGAGTGAGTACAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHMALHI*SEYSTR
Trigger: CCTCGTGCTGTACTCACTGCAGATATGCAAAGCCAT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATACAGCAATGTCCCTGTaGACGCAGTTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNTAMSL*TQLMLS
Trigger: GGAGAGCATCAACTGCGTGCACAGGGACATTGCTGT...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATTGGAGAGGTGGGGTGTaGAGTGAGTTAACGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNWRGGV*SELTGD
Trigger: ATCTCCCGTTAACTCACTGCACACCCCACCTCTCCA...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR GCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTCAGCCTCCCACAGCTaGTGGGCCTCTTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFSASHS*WASSRL
Trigger: CAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTCCACCATCTGCTTCTaGTGTTTGTCCAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPSTICF*CLSRIC
Trigger: GCAAATCCTGGACAAACAGCAGAAGCAGATGGTGGA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCTTGTTGATGAGCTCTaGCAGGTCTTTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHLVDEL*QVFVEQ
Trigger: CTGCTCAACAAAGACCTGGCAGAGCTCATCAACAAG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCTTGTTGATGAGCTCTaGCAGGTCTTTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPLVDEL*QVFVEQ
Trigger: CTGCTCAACAAAGACCTGGCAGAGCTCATCAACAAG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTACACTGTACAAGAATaGCAGGCCCATCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLYTVQE*QAHPSS
Trigger: AGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTATGCAGAAACATCGGTaGTTTAAGACCCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGMQKHR*FKTQPL
Trigger: TAGTGGCTGGGTCTTAAAGCACCGATGTTTCTGCAT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR GCA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTCCAGGGCTATTCAATaGAGAAACATCGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESSRAIQ*RNIGAL
Trigger: TAAAGCACCGATGTTTCTGCATTGAATAGCCCTGGA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CCA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTAGGAGCTCGAAGTTaGACTTCTTGTCAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: SILCLDSQLACSWTVPQVLGARS*TSCQVH
Trigger: ATGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAG...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCCATCTTTCCTAGGATaGATGATGAGAGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHPSFLG*MMREPW
Trigger: CCAAGGCTCTCTCATCATCCATCCTAGGAAAGATGG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATCCTCTCTTGCTCCATaGCAATGTCCTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPSSLAP*QCPSPS
Trigger: AGATGGAGAAGGACATTGCCATGGAGCAAGAGAGGA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTCCTCTCTTGCTCCATaGCAATGTCCTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLSSLAP*QCPSPS
Trigger: AGATGGAGAAGGACATTGCCATGGAGCAAGAGAGGA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTGGGCTCCAAGATTTTaGGGGTTCGGTAGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHWAPRF*GFGSEH
Trigger: ATGCTCGCTACCGAACCCCCAAAATCTTGGAGCCCA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCTTCTCTGGCGTCAATaGGGACTTATCATTCATATA +
Preference number: 4 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPLLWRQ*GLIIHI
Trigger: TATATGAATGATAAGTCCCCATTGACGCCAGAGAAG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCCAGAACCTTGGCCTaGTCCACAGCGTCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAARTLA*STASSR
Trigger: CCTGCTCGACGCTGTGGACCAGGCCAAGGTTCTGGC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTTGGCTTAGGGAGCAGTaGCCAGGCAGCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAWLREQ*PGSSSP
Trigger: GGGACTGCTGCTGCCTGGCCACTGCTCCCTAAGCCA...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCTGCATGGACCAGGCTaGCTTAGGGAGCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLLHGPG*LREQWP
Trigger: TGGCCACTGCTCCCTAAGCCAGCCTGGTCCATGCAG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGGGAAAGGAATAGCTTaGTTCCCAAATCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNGKGIA*FPNRPA
Trigger: GGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGGGAAAGGAATAGCTTaGTTCCCAAATCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDGKGIA*FPNRPA
Trigger: GGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGGGAAAGGAATAGCTTaGTTCCCAAATCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPGKGIA*FPNRPA
Trigger: GGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCTTCCCCCTGATGCTTaGTTTGTTGACAACACAGCA +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPLPPDA*FVDNTA
Trigger: TGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCCCAAGGTCCTATCTTaGCCGCATCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPPKVLS*PHLSAS
Trigger: AGAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGGAAGAGAGCGGATTTaGCCCAAGGTCCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHGRERI*PKVLSW
Trigger: CCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTAGTTTTTCCCAGGATTaGAGCTGTTGCTATAGAAGC +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGSFSQD*SCCYRS
Trigger: GCTTCTATAGCAACAGCTTCAATCCTGGGAAAAACT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTCACTGCCTCGCTCATaGACTTCTCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPSLPRS*TSPCCP
Trigger: TGGACAACAAGGAGAAGTTCATGAGCGAGGCAGTGA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACTCACTGCCTCGCTCATaGACTTCTCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDSLPRS*TSPCCP
Trigger: TGGACAACAAGGAGAAGTTCATGAGCGAGGCAGTGA...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGGATTTGCCGCATTTTaGCCTTTTCAGCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNGFAAF*PFQPPT
Trigger: TGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGGATTTGCCGCATTTTaGCCTTTTCAGCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHGFAAF*PFQPPT
Trigger: TGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGGCTGCTGGGTTGGATaGAGTCCTCCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLGCWVG*SPPPGT
Trigger: AGTTCCAGGAGGAGGACTTCATCCAACCCAGCAGCC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACTACTGCTGGAAGGTCTaGTGGATCATCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDYCWKV*WIIFRN
Trigger: GTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTA...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATTACTGCTGGAAGGTCTaGTGGATCATCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNYCWKV*WIIFRN
Trigger: GTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTA...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTATGAGAGAGCCTTGGTaGTCACCCTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFMREPW*SPCSRQ
Trigger: CTGCCGGCTGCAGGGTGAGCACCAAGGCTCTCTCAT...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTTCCCCTCTGTCCAGCTaGAGCCTGAGCAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLASPLSS*SLSSTA
Trigger: GGCTGTACTGCTCAGGCTGCAGCTGGACAGAGGGGA...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCAACACAGCATCCTGTaGCTGGACTCCCAATTAGCT +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHQHSIL*LDSQLA
Trigger: AGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCTGGTACCACCACCATaGGCTCTGCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLALVPPP*ALQGLQ
Trigger: CTGAAGGCCCTGCAGAGCCCATGGTGGTGGTACCAG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCAGCCAACCGGATGTTaGGCCCGATCCGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLQPTGC*ARSARS
Trigger: TGAGCGGGCGGATCGGGCCCAACATCCGGTTGGCTG...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATAAAAATAGAGCAGCGTaGTCCTGTCCTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHKNRAA*SCPPSG
Trigger: GCCTGAAGGAGGACAGGACCACGCTGCTCTATTTTT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTTTGTCAAGTGCATTGTaGGGCATATCCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGLSSAL*GISLKN
Trigger: GTTCTTCAAGGATATGCCCCACAATGCACTTGACAA...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCTAGGAGCTCGAAGTTaGACTTCTTGTCAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: QHSILCLDSQLACSWTVPLGARS*TSCQVH
Trigger: ATGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACCTCCTGCATCTGCTTTaGGAAAAACAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDLLHLL*EKQVQP
Trigger: GGGCTGGACTTGTTTTTCCCAAAGCAGATGCAGGAG...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCTCCTGCATCTGCTTTaGGAAAAACAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNLLHLL*EKQVQP
Trigger: GGGCTGGACTTGTTTTTCCCAAAGCAGATGCAGGAG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTTGATGGACAAGGCCTaGGGGGCACCTTCAATGCCC +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLLMDKA*GAPSMP
Trigger: GGGCATTGAAGGTGCCCCCCAGGCCTTGTCCATCAA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCCTCCAGGTTTAGCATaGGGATCTGGGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLPPGLA*GSGAGC
Trigger: ACAGCCTGCCCCAGATCCCCATGCTAAACCTGGAGG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTGGCAATGCCATACTGTaGACCTCCGGGCCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFGNAIL*TSGPSQ
Trigger: CTGCGAAGGCCCGGAGGTCCACAGTATGGCATTGCC...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTGAAGTTAATGGACTCTaGGGACATCCATTTGATGGG +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLEVNGL*GHPFDG
Trigger: CCCATCAAATGGATGTCCCCAGAGTCCATTAACTTC...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATGTCCTTTCAGCTGCTaGACTCTTCCATTTGGATGT +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPCPFSC*TLPFGC
Trigger: ACATCCAAATGGAAGAGTCCAGCAGCTGAAAGGACA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCGCACTCCTCCTCCCTaGGCGAGGCGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTRTPPP*ARRTAG
Trigger: TCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTTATGCTGCAGCTCTCTaGGAGGTGGGACCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTYAAAL*EVGPPG
Trigger: GCCCGGCGGTCCCACCTCTCAGAGAGCTGCAGCATA...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCTGCCAGGTCTTTGTTaGGCAGTTTCTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLLPGLC*AVSGCP
Trigger: AGGGCACCCAGAAACTGCTCAACAAAGACCTGGCAG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGATCTCACTGGCTGCCTaGCCCCCAAAACAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLISLAA*PPKQSS
Trigger: GGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGAT...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGCTGCTGGGTTGGATaGAGTCCTCCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAGCWVG*SPPPGT
Trigger: AGTTCCAGGAGGAGGACTTCATCCAACCCAGCAGCC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATAAGTTCTCCTGCATCTaGTTTGGGAAAAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHKFSCI*FGKNKS
Trigger: GGACTTGTTTTTCCCAAAGCAGATGCAGGAGAACTT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGCTTTAAGTTCTCCTaGATCTGCTTTGGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPGFKFS*ICFGKN
Trigger: GTTTTTCCCAAAGCAGATGCAGGAGAACTTAAAGCC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTCAGGCAGGTGGGCTTTaGGTCCTGACTAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFQAGGL*VLTSQL
Trigger: CAGCTGACTAGTCAGGACGCAAAGCCCACCTGCCTG...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAGATGTCTGACTCTATaGTGCAGCTCTCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNRCLTL*CSSLRG
Trigger: ACCTCTCAGAGAGCTGCAGCATAGAGTCAGACATCT...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGGTAGGCCATGGCTTTaGATATCTGCAGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDGRPWL*ISAVST
Trigger: TGTACTCACTGCAGATATGCAAAGCCATGGCCTACC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGGTAGGCCATGGCTTTaGATATCTGCAGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPGRPWL*ISAVST
Trigger: TGTACTCACTGCAGATATGCAAAGCCATGGCCTACC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTCAGGAACCTGGAACTaGAGCTTTGGAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLSGTWN*SFGARR
Trigger: CCTCCTGGCTCCAAAGCTGCAGTTCCAGGTTCCTGA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTACACTGTACAAGAATaGCAGGCCCATCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHYTVQE*QAHPSS
Trigger: AGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCCTCAGGAGGGCACATaGTGTCAGTCCAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLPQEGT*CQSRPN
Trigger: GTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATCGTTCCAGCCCTCCCTaGCATATAGTTTATCAAGTG +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNRSSPP*HIVYQV
Trigger: CACTTGATAAACTATATGGCAGGGAGGGCTGGAACG...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTACCCACCGTCATCTGTaGGTGCAGCCAGTGGATCTC +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLATHRHL*VQPVDL
Trigger: GAGATCCACTGGCTGCACCCACAGATGACGGTGGGT...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTTGTCAAGTGCATTGTaGGGCATATCCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: QEESGFGPRSYLGRISLLLSSAL*GISLKN
Trigger: GTTCTTCAAGGATATGCCCCACAATGCACTTGACAA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATTGTCAAGTGCATTGTaGGGCATATCCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLSSAL*GISLKN
Trigger: GTTCTTCAAGGATATGCCCCACAATGCACTTGACAA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTATGATGAGAGAGCCTTaGTGCTCACCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAMMREP*CSPCSR
Trigger: CCGGCTGCAGGGTGAGCACCAAGGCTCTCTCATCAT...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCCATCTTTCCTAGGATaGATGATGAGAGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHPSFLG*MMREPW
Trigger: CCAAGGCTCTCTCATCATCCATCCTAGGAAAGATGG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTCCTCTCTTGCTCCATaGCAATGTCCTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHSSLAP*QCPSPS
Trigger: AGATGGAGAAGGACATTGCCATGGAGCAAGAGAGGA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGTTCCTGGAAGGCTGTaGGCTCCAAGATTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLVPGRL*APRFWG
Trigger: CCCCCAAAATCTTGGAGCCCACAGCCTTCCAGGAAC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGCCGACCTCCTTCTCTaGCGTCAATGGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLADLLL*RQWGLI
Trigger: GATAAGTCCCCATTGACGCCAGAGAAGGAGGTCGGC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTGATTGGCCAGAACCTTaGCCTGGTCCACAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFDWPEP*PGPQRR
Trigger: TCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATC...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGAAGACGCAGGCAGGTaGCCCCCACCCTCCGTCACT +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTEDAGR*PPPSVT
Trigger: AGTGACGGAGGGTGGGGGCCACCTGCCTGCGTCTTC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCTTCCCCCTGATGCTTaGTTTGTTGACAACACAGCA +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPLPPDA*FVDNTA
Trigger: TGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGTGGGCTTTGCGTCCTaGCTAGTCAGCTGGCGGATC +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLVGFAS*LVSWRI
Trigger: GATCCGCCAGCTGACTAGTCAGGACGCAAAGCCCAC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCCCAGCAGCGGGTCATaGGGGTATAAAGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLPSSGS*GYKGPV
Trigger: CACCGGTCCTTTATACCCTCATGACCCGCTGCTGGG...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGACAGAGCTCATTCTTaGGCTCCAGCACGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLDRAHS*APARPA
Trigger: TGCGGGCCGTGCTGGAGCTCAAGAATGAGCTCTGTC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTCTGCCAGGTCTTTGTTaGGCAGTTTCTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFLPGLC*AVSGCP
Trigger: AGGGCACCCAGAAACTGCTCAACAAAGACCTGGCAG...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTAGTGGCAAGGGAAGGTaGCTCCCCTTGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTSGKGR*LPLAFP
Trigger: GGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACT...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTGTCTGACTCTATGCTaGAGCTCTCTGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLCLTLC*SSLRGG
Trigger: CCCACCTCTCAGAGAGCTGCAGCATAGAGTCAGACA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTTCAGGAACCTGGAACTaGAGCTTTGGAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLASGTWN*SFGARR
Trigger: CCTCCTGGCTCCAAAGCTGCAGTTCCAGGTTCCTGA...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR GCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGGGGAGAGGGCGTCGTaGAAAGTGGCAAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLGERAS*KVAREG
Trigger: ACCTTCCCTTGCCACTTTGCACGACGCCCTCTCCCC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCTAGGAGCTCGAAGTTaGACTTCTTGTCAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPLGARS*TSCQVH
Trigger: ATGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGAAGTTAATGGACTCTaGGGACATCCATTTGATGGG +
Preference number: 4 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDEVNGL*GHPFDG
Trigger: CCCATCAAATGGATGTCCCCAGAGTCCATTAACTTC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGAAGTTAATGGACTCTaGGGACATCCATTTGATGGG +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHEVNGL*GHPFDG
Trigger: CCCATCAAATGGATGTCCCCAGAGTCCATTAACTTC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTTCCTGGAAGGCTGTaGGCTCCAAGATTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAVPGRL*APRFWG
Trigger: CCCCCAAAATCTTGGAGCCCACAGCCTTCCAGGAAC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATCTTCTCTGGCGTCAATaGGGACTTATCATTCATATA +
Preference number: 4 (lower is better)
Translates to: EGRRGRERNSLVPKSACHLLWRQ*GLIIHI
Trigger: TATATGAATGATAAGTCCCCATTGACGCCAGAGAAG...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACTTCTCTGGCGTCAATaGGGACTTATCATTCATATA +
Preference number: 4 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLLWRQ*GLIIHI
Trigger: TATATGAATGATAAGTCCCCATTGACGCCAGAGAAG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCCCACATACCTCATaGCCCCAGGGACAGCACCCA +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTGPHTS*PQGQHP
Trigger: TGGGTGCTGTCCCTGGGGCCATGAGGTATGTGGGCC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGGATTTGCCGCATTTTaGCCTTTTCAGCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLGFAAF*PFQPPT
Trigger: TGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGACTTCTCCTCCTGCCTaGGCCACTGGTAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLTSPPA*ATGSPP
Trigger: TGGAGGACTACCAGTGGCTCAGGCAGGAGGAGAAGT...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGACAGAGCTCATTCTTaGGCTCCAGCACGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTDRAHS*APARPA
Trigger: TGCGGGCCGTGCTGGAGCTCAAGAATGAGCTCTGTC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCACTCATACTTGTCCTaGACCTCACCCACCGTCATC +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAHSYLS*TSPTVI
Trigger: GATGACGGTGGGTGAGGTGCAGGACAAGTATGAGTG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATAAGTTCTCCTGCATCTaGTTTGGGAAAAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: RRGRERNSLVPKSACHVHKFSCI*FGKNKS
Trigger: GGACTTGTTTTTCCCAAAGCAGATGCAGGAGAACTT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGGCTTTAAGTTCTCCTaGATCTGCTTTGGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPGFKFS*ICFGKN
Trigger: GTTTTTCCCAAAGCAGATGCAGGAGAACTTAAAGCC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCAGGCAGGTGGGCTTTaGGTCCTGACTAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLQAGGL*VLTSQL
Trigger: CAGCTGACTAGTCAGGACGCAAAGCCCACCTGCCTG...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTCAGGATCTCCCACATaGACACGGCGAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFSGSPT*TRRTSR
Trigger: TCTGGATGTTCGCCGTGTGCATGTGGGAGATCCTGA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTCCCGGATCTCCGTCTaGACAGTGCATTTGACCAGT +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFSRISV*TVHLTS
Trigger: ACTGGTCAAATGCACTGTCCAGACGGAGATCCGGGA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCAATGCCATACTGTaGACCTCCGGGCCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTGNAIL*TSGPSQ
Trigger: CTGCGAAGGCCCGGAGGTCCACAGTATGGCATTGCC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGTATAAAGGACCGGTaGACAGAGATCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAGIKDR*TEIRLG
Trigger: CCCAAGCCTGATCTCTGTCCACCGGTCCTTTATACC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTTGGAGCCAGGAGGTTaGTTTGCGGAGGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLLEPGG*FAEGVC
Trigger: ACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAA...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTTCCTCCCGCATGCTGTaGCGTTTGAAGACATTGTGC +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLASSRML*RLKTLC
Trigger: GCACAATGTCTTCAAACGCCACAGCATGCGGGAGGA...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTTGTTGAGCAGTTTCTaGGTGCCCTCGATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLLLSSF*VPSISV
Trigger: GACAGAGATCGAGGGCACCCAGAAACTGCTCAACAA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCACTCTGCAGGTGGGTaGGCCAGATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTHSAGG*ARLART
Trigger: GGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTCAATTAGCTTGTTCCTaGACTGTGCCCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFQLACS*TVPQVL
Trigger: GAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTG...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAGTCTGCCAGATCTTTaGAGAGACAAGAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNSLPDL*RDKNSV
Trigger: GACAGAATTCTTGTCTCTCCAAAGATCTGGCAGACT...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR GCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCAGGCCGGCGTAACGTaGCCAACTTTACTCGACTCA +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLQAGVT*PTLLDS
Trigger: TGAGTCGAGTAAAGTTGGGCACGTTACGCCGGCCTG...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGACCGTCATCTGTGGGTaGAGCCAGTGGATCTCATCG +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLTVICG*SQWISS
Trigger: CGATGAGATCCACTGGCTGCACCCACAGATGACGGT...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCTTGTTGATGAGCTCTaGCAGGTCTTTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLLVDEL*QVFVEQ
Trigger: CTGCTCAACAAAGACCTGGCAGAGCTCATCAACAAG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTTCCTCCTCCTGGAACTaGAGCTTTGGAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTSSSWN*SFGARR
Trigger: CCTCCTGGCTCCAAAGCTGCAGTTCCAGGAGGAGGA...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGAGCGAGGCGTACTGCTaGAAGGTCTGCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLSEAYC*KVCWII
Trigger: GATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCT...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGTTCCTGGAAGGCTGTaGGCTCCAAGATTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLVPGRL*APRFWG
Trigger: CCCCCAAAATCTTGGAGCCCACAGCCTTCCAGGAAC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGAAGACATTGTGCCGGTaGAGAGGTGGGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLKTLCR*RGGVCS
Trigger: ACTGCACACCCCACCTCTCCACCGGCACAATGTCTT...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTAGTACAGCACGAGGGTaGGCACCTTCAGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTSTARG*APSGSS
Trigger: AGAACTCCCTGAAGGTGCTCACCCTCGTGCTGTACT...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCTGGGGACATCCATTTaGTGGGGAGACGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTLGTSI*WGDESQ
Trigger: CTGTGACTCGTCTCCCCATCAAATGGATGTCCCCAG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTATCTCACTGGCTGCCTaGCCCCCAAAACAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTISLAA*PPKQSS
Trigger: GGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGAT...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCCAGGAGGTTGGTTTaGGGAGGGGGTCTGTACTTA +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTARRLV*GGGLYL
Trigger: TAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCGTTTGAAGACATTGTaGCGGTGGAGAGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTRLKTL*RWRGGV
Trigger: CACCCCACCTCTCCACCGGCACAATGTCTTCAAACG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR GCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTCCACCATCTGCTTCTaGTGTTTGTCCAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFSTICF*CLSRIC
Trigger: GCAAATCCTGGACAAACAGCAGAAGCAGATGGTGGA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTACACTGTACAAGAATaGCAGGCCCATCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFYTVQE*QAHPSS
Trigger: AGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCCTCAGGAGGGCACATaGTGTCAGTCCAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTPQEGT*CQSRPN
Trigger: GTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCTCCATGAAGTCTTCTaGCAAGTAGCGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLLHEVF*QVADLK
Trigger: CTTCAAATCCGCTACTTGCCAGAAGACTTCATGGAG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCCATCTTTCCTAGGATaGATGATGAGAGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAPSFLG*MMREPW
Trigger: CCAAGGCTCTCTCATCATCCATCCTAGGAAAGATGG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGACAGAGATCAGGCTTaGGCAGCCGGTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTDRDQA*AAGLLS
Trigger: AGAAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGGTATAAAGGACCGGTaGACAGAGATCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLGIKDR*TEIRLG
Trigger: CCCAAGCCTGATCTCTGTCCACCGGTCCTTTATACC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTCCTCCCGCATGCTGTaGCGTTTGAAGACATTGTGC +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLSSRML*RLKTLC
Trigger: GCACAATGTCTTCAAACGCCACAGCATGCGGGAGGA...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTCTTCCCCCTGATGCTTaGTTTGTTGACAACACAGCA +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFLPPDA*FVDNTA
Trigger: TGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAG...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGAGTTTTTCCCAGGATTaGAGCTGTTGCTATAGAAGC +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLSFSQD*SCCYRS
Trigger: GCTTCTATAGCAACAGCTTCAATCCTGGGAAAAACT...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR TCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTTTGCATATCTGCAGTaGGTACAGCACGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLFAYLQ*VQHEGE
Trigger: CTCACCCTCGTGCTGTACTCACTGCAGATATGCAAA...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGACTTCTTGTCAAGTaGATTGTGGGGCATATCCTT +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAGLLVK*IVGHIL
Trigger: AAGGATATGCCCCACAATGCACTTGACAAGAAGTCC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTGGACTTCTTGTCAAGTaGATTGTGGGGCATATCCTT +
Preference number: 4 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFGLLVK*IVGHIL
Trigger: AAGGATATGCCCCACAATGCACTTGACAAGAAGTCC...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTACAGCAATGTCCCTGTaGACGCAGTTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTTAMSL*TQLMLS
Trigger: GGAGAGCATCAACTGCGTGCACAGGGACATTGCTGT...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCCTCATCTCACTGGCTaGCTGACCCCCAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTPHLTG*LTPKTK
Trigger: CTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTTTGGCCGCATCTCTCTaGTTCTTCCCCCTGATGCTT +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTLAASL*FFPLML
Trigger: AAGCATCAGGGGGAAGAAGCAGAGAGATGCGGCCAA...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCTCCATGAAGTCTTCTaGCAAGTAGCGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLALHEVF*QVADLK
Trigger: CTTCAAATCCGCTACTTGCCAGAAGACTTCATGGAG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCATTCATATAAACCATaGGGTCCAGGGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAHSYKP*GPGTSP
Trigger: AGGAGAAGTCCCTGGACCCCATGGTTTATATGAATG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGATGGCTTTGCATATCTaGAGTGAGTACAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLMALHI*SEYSTR
Trigger: CCTCGTGCTGTACTCACTGCAGATATGCAAAGCCAT...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR GCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGGTAGGCCATGGCTTTaGATATCTGCAGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLGRPWL*ISAVST
Trigger: TGTACTCACTGCAGATATGCAAAGCCATGGCCTACC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCTTCTCTGGCGTCAATaGGGACTTATCATTCATATA +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLLLWRQ*GLIIHI
Trigger: TATATGAATGATAAGTCCCCATTGACGCCAGAGAAG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGAACTTACAATCACAGTaGAAGGTGAAGGTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLNLQSQ*KVKVKQ
Trigger: TTGCTTCACCTTCACCTTCCACTGTGATTGTAAGTT...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR GCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCTTGTTGATGAGCTCTaGCAGGTCTTTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTLVDEL*QVFVEQ
Trigger: CTGCTCAACAAAGACCTGGCAGAGCTCATCAACAAG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTTGTCAAGTGCATTGTaGGGCATATCCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: INFNIHCTRMPGPSLISLLSSAL*GISLKN
Trigger: GTTCTTCAAGGATATGCCCCACAATGCACTTGACAA...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCTAGGAGCTCGAAGTTaGACTTCTTGTCAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTLGARS*TSCQVH
Trigger: ATGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CCA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTCATTCATATAAACCATaGGGTCCAGGGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTHSYKP*GPGTSP
Trigger: AGGAGAAGTCCCTGGACCCCATGGTTTATATGAATG...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS GCA 90 bp CAGGGGCGGAAGACGCAGGCAGGTGGCCCCCACCCTCCGTCACTCTaGAGGTGGGTGGGCCAGATTGGCCAGAACCTTGGCCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: QGRKTQAGGPHPPSL*RWVGQIGQNLGLVH
Trigger: GTGGACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGGAGGGTGGGGGCCACCTGCCTGCGTCTTCCGCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 90 bp AGACGCAGGCAGGTGGCCCCCACCCTCCGTCACTCTGCAGGTGGGTaGGCCAGATTGGCCAGAACCTTGGCCTGGTCCACAGCGTCGAGC +
Preference number: 5 (lower is better)
Translates to: RRRQVAPTLRHSAGG*ARLARTLAWSTASS
Trigger: GCTCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGGAGGGTGGGGGCCACCTGCCTGCGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 90 bp GCCGGAAGTAGGTTTCCAGTAACACGGAAGCCCTACTACGCCGCCTaGGAGACCCTTCCGTGCTACCCCGGCCAGGGACCCGCCCGGACC +
Preference number: 5 (lower is better)
Translates to: AGSRFPVTRKPYYAA*ETLPCYPGQGPART
Trigger: GGTCCGGGCGGGTCCCTGGCCGGGGTAGCACGGAAGGGTCTCCCAGGCGGCGTAGTAGGGCTTCCGTGTTACTGGAAACCTACTTCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS CCA 90 bp GCCGATGCTGCAGGGAATGCAGACAGACTCCGCTGCTCCCTGCCCTaGGCGGTGGGCAAGGATGGTGGCTCTGCACAAGGTGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: ADAAGNADRLRCSLP*AVGKDGGSAQGAKR
Trigger: CCTCTTGGCACCTTGTGCAGAGCCACCATCCTTGCCCACCGCCCAGGGCAGGGAGCAGCGGAGTCTGTCTGCATTCCCTGCAGCATCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCGGTGGGTGGGCCAGATaGGCCAGAACCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPGGWAR*ARTLAW
Trigger: CCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACC...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS GCA 90 bp TCATGGCCGATGCTGCAGGGAATGCAGACAGACTCCGCTGCTCCCTaGCCTGGGCGGTGGGCAAGGATGGTGGCTCTGCACAAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: SWPMLQGMQTDSAAP*PGRWARMVALHKVP
Trigger: TGGCACCTTGTGCAGAGCCACCATCCTTGCCCACCGCCCAGGGCAGGGAGCAGCGGAGTCTGTCTGCATTCCCTGCAGCATCGGCCATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS GCA 90 bp ACTGCCTGGCCCTCCTCCAGCGGGAGGCACCTGATGGACCTGATCTaGTTGAACTCGGCCAGGCAGGTGGGCTGTGGGAAAAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: TAWPSSSGRHLMDLI*LNSARQVGCGKRRG
Trigger: CCCCCTTCTTTTCCCACAGCCCACCTGCCTGGCCGAGTTCAAGCAGATCAGGTCCATCAGGTGCCTCCCGCTGGAGGAGGGCCAGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461615.1
CDS CCA 90 bp CCCTCCGTCACTCTGCAGGTGGGTGGGCCAGATTGGCCAGAACCTTaGCCTGGTCCACAGCGTCGAGCAGGTTCTTGGCGTCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: PSVTLQVGGPDWPEP*PGPQRRAGSWRPQP
Trigger: TGGCTGTGGACGCCAAGAACCTGCTCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTTAGGTCGGCTGGGCTaGGGTGGGGGTTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPLGRLG*GGGSWK
Trigger: CTTCCAGGAACCCCCACCCAAGCCCAGCCGACCTAA...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 90 bp TTTGACTTCCACCGACGGCAGGTCAGCGAGGTCCTGCTGCCTGAGTaGGAATCTGCAGCGATTGCAGCCTCTCCCTGCCCCCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: FDFHRRQVSEVLLPE*ESAAIAASPCPLLA
Trigger: GGCCAGGAGGGGGCAGGGAGAGGCTGCAATCGCTGCAGATTCTCACTCAGGCAGCAGGACCTCGCTGACCTGCCGTCGGTGGAAGTCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS GCA 90 bp GTACCACCACCATGGGCTCTGCAGGGCCTTCAGGCCGGCGTAACGTaGCCAACTTTACTCGACTCAGGGGCTCGGACACCCCAGACATCC +
Preference number: 5 (lower is better)
Translates to: VPPPWALQGLQAGVT*PTLLDSGARTPQTS
Trigger: GGATGTCTGGGGTGTCCGAGCCCCTGAGTCGAGTAAAGTTGGGCACGTTACGCCGGCCTGAAGGCCCTGCAGAGCCCATGGTGGTGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521164.5
ENST00000522338.5
ENST00000522517.5
CDS GCA 90 bp TTGTCCCCCGCGAGTGGCCTGGGACTCAATTCCCCTGGCCCAGCTTaGTCTAAGAGGATCTGCTGGGCCAGCCAACAGGAAGCGCAGTCC +
Preference number: 5 (lower is better)
Translates to: LSPASGLGLNSPGPA*SKRICWASQQEAQS
Trigger: GGACTGCGCTTCCTGTTGGCTGGCCCAGCAGATCCTCTTAGAGCAAGCTGGGCCAGGGGAATTGAGTCCCAGGCCACTCGCGGGGGACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522245.1
CDS-3UTR CAA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTCAGCCAACCGGATGTaGGGCCCGATCCGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHSANRM*GPIRPL
Trigger: GAGCGGGCGGATCGGGCCCAACATCCGGTTGGCTGA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTCAGCCAACCGGATGTaGGGCCCGATCCGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESSANRM*GPIRPL
Trigger: GAGCGGGCGGATCGGGCCCAACATCCGGTTGGCTGA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCGGACAGAGATCAGGCTaGGGCAGCCGGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPGQRSG*GSRSPF
Trigger: GAAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTCC...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTTCTCGGCTGCTGGGTaGGATGAAGTCCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPFSAAG*DEVLLP
Trigger: CGGGAGGAGGACTTCATCCAACCCAGCAGCCGAGAA...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAGGTGGGTGGGCCAGATaGGCCAGAACCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRGGWAR*ARTLAW
Trigger: CCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACC...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGGTGGGTGGGCCAGATaGGCCAGAACCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPGGWAR*ARTLAW
Trigger: CCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 90 bp GTCACCCACAAGCCCTGCTTCTACCCAGAGGCCTTGAGGATCTGGTaGAGGCCTGGCTTCCATACCGCTGGCCACTCCCTCCACCCCTAC +
Preference number: 5 (lower is better)
Translates to: VTHKPCFYPEALRIW*RPGFHTAGHSLHPY
Trigger: GTAGGGGTGGAGGGAGTGGCCAGCGGTATGGAAGCCAGGCCTTCACCAGATCCTCAAGGCCTCTGGGTAGAAGCAGGGCTTGTGGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495097.1
CDS GCA 90 bp CCCTCAGGAACCTGGAACTGCAGCTTTGGAGCCAGGAGGTTGGTTTaGGGAGGGGGTCTGTACTTAGGTCGGCTGGGCTTGGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PSGTWNCSFGARRLV*GGGLYLGRLGLGGG
Trigger: ACCCCCACCCAAGCCCAGCCGACCTAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAAGCTGCAGTTCCAGGTTCCTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS GCA 90 bp GGGATGCTTTTGACTTCCACCGACGGCAGGTCAGCGAGGTCCTGCTaGCTGAGTGAGAATCTGCAGCGATTGCAGCCTCTCCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: GMLLTSTDGRSARSC*LSENLQRLQPLPAP
Trigger: GGGGGCAGGGAGAGGCTGCAATCGCTGCAGATTCTCACTCAGGCAGCAGGACCTCGCTGACCTGCCGTCGGTGGAAGTCAAAAGCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS GCA 90 bp AGGCTGCAGGCCTCCCTCCCAGGGCGGAGCTCGGCAAACATTTGGTaGCACGATGGATCTCAGGGAGTGACAAGTCTCAAAGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RLQASLPGRSSANIW*HDGSQGVTSLKGRP
Trigger: GGGCCTGCCTTTGAGACTTGTCACTCCCTGAGATCCATCGTGGCACCAAATGTTTGCCGAGCTCCGCCCTGGGAGGGAGGCCTGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412793.5
ENST00000496920.1
CDS CCA 90 bp CCCAGGCTGCAGGCCTCCCTCCCAGGGCGGAGCTCGGCAAACATTTaGTGCCACGATGGATCTCAGGGAGTGACAAGTCTCAAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PRLQASLPGRSSANI*CHDGSQGVTSLKGR
Trigger: CCTGCCTTTGAGACTTGTCACTCCCTGAGATCCATCGTGGCACCAAATGTTTGCCGAGCTCCGCCCTGGGAGGGAGGCCTGCAGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412793.5
ENST00000496920.1
CDS CCA 90 bp CCCAGAGGCCTTGAGGATCTGGTGAAGGCCTGGCTTCCATACCGCTaGCCACTCCCTCCACCCCTACCTGTGCACGCAGTTGATGCTCTC +
Preference number: 5 (lower is better)
Translates to: PRGLEDLVKAWLPYR*PLPPPLPVHAVDAL
Trigger: GAGAGCATCAACTGCGTGCACAGGTAGGGGTGGAGGGAGTGGCCAGCGGTATGGAAGCCAGGCCTTCACCAGATCCTCAAGGCCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495097.1
CDS CCA 90 bp TGTGGGCTGGATGGACTGAGGGGAAGACGCAGGTGGCCAGTGAGTTaGGGAGAGCCAGGGGCACGGAATGATTCTTTCCTGGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: CGLDGLRGRRRWPVS*GEPGARNDSFLGRH
Trigger: GTGCCTGCCCAGGAAAGAATCATTCCGTGCCCCTGGCTCTCCCCAACTCACTGGCCACCTGCGTCTTCCCCTCAGTCCATCCAGCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522245.1
CDS CCA 90 bp CCTAGCTATTGGAGAGAGCCAGGTTTCCCCTGGGAAGAGCTCTCCTaGGGTGGTGCTTGTCCCCCGCGAGTGGCCTGGGACTCAATTCCC +
Preference number: 5 (lower is better)
Translates to: PSYWREPGFPWEELS*GGACPPRVAWDSIP
Trigger: GGGAATTGAGTCCCAGGCCACTCGCGGGGGACAAGCACCACCCCAGGAGAGCTCTTCCCAGGGGAAACCTGGCTCTCTCCAATAGCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522245.1
CDS-3UTR CAA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTTCAGCCAACCGGATGTaGGGCCCGATCCGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSSANRM*GPIRPL
Trigger: GAGCGGGCGGATCGGGCCCAACATCCGGTTGGCTGA...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATGCGTCGAGCAGGTTCTaGGCGTCCACAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHASSRF*ASTARV
Trigger: CACCCTGGCTGTGGACGCCAAGAACCTGCTCGACGC...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCCCTCTGAGCCATCTTaGTCACCGTCACCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPPSEPS*SPSPCV
Trigger: GACACAGGGTGACGGTGACAAAGATGGCTCAGAGGG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 90 bp CACTGCTCTGTGTCACCCACAAGCCCTGCTTCTACCCAGAGGCCTTaGGGATCTGGTGAAGGCCTGGCTTCCATACCGCTGGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: HCSVSPTSPASTQRP*GSGEGLASIPLATP
Trigger: GGGAGTGGCCAGCGGTATGGAAGCCAGGCCTTCACCAGATCCTCAAGGCCTCTGGGTAGAAGCAGGGCTTGTGGGTGACACAGAGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495097.1
CDS GCA 90 bp AAGTCCTCCTCCTGGAACTGCAGCTTTGGAGCCAGGAGGTTGGTTTaGGGAGGGGGTCTGTACTTAGGTCGGCTGGGCTTGGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: KSSSWNCSFGARRLV*GGGLYLGRLGLGGG
Trigger: ACCCCCACCCAAGCCCAGCCGACCTAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAAGCTGCAGTTCCAGGAGGAGGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397497.8
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATTTGGAGCCAGGAGGTaGGTTTGCGGAGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRFGARR*VCGGGL
Trigger: CAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTTCTCGGCTGCTGGGTaGGATGAAGTCCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPFSAAG*DEVLLP
Trigger: CGGGAGGAGGACTTCATCCAACCCAGCAGCCGAGAA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCGCGTCGAGCAGGTTCTaGGCGTCCACAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVASSRF*ASTARV
Trigger: CACCCTGGCTGTGGACGCCAAGAACCTGCTCGACGC...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCAGATTGGCCAGAACCTaGGCCTGGTCCACAGCGTCG +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPRLART*AWSTAS
Trigger: CGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATCT...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTGGTGGGTGGGCCAGATaGGCCAGAACCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSGGWAR*ARTLAW
Trigger: CCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACC...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCGGACTCCCAATTAGCTaGTTCCTGGACTGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPGLPIS*FLDCAP
Trigger: TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCC...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS GCA 90 bp AAGGGGATGCTTTTGACTTCCACCGACGGCAGGTCAGCGAGGTCCTaGTGCCTGAGTGAGAATCTGCAGCGATTGCAGCCTCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: KGMLLTSTDGRSARS*CLSENLQRLQPLPA
Trigger: GGCAGGGAGAGGCTGCAATCGCTGCAGATTCTCACTCAGGCAGCAGGACCTCGCTGACCTGCCGTCGGTGGAAGTCAAAAGCATCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS-3UTR CAA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTGCTAAGATCGGCACATaGCAGTCCCAGGGAGGCGCG +
Preference number: 5 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSAKIGT*QSQGGA
Trigger: CGCGCCTCCCTGGGACTGCAATGTGCCGATCTTAGC...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAGCTAGGGATGAGGTTTaGATGGACAAGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRARDEV*MDKAWG
Trigger: CCCCCAGGCCTTGTCCATCAAAACCTCATCCCTAGC...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCAGCCAGGAGGTTGGTTaGCGGAGGGGGTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSQEVG*RRGSVL
Trigger: AAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCT...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTTTGGAGCCAGGAGGTaGGTTTGCGGAGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESFGARR*VCGGGL
Trigger: CAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATGTGCCAGCCGCATCTaGTTGATGAGCTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRCASRI*LMSSAR
Trigger: CCTGGCAGAGCTCATCAACAAGATGCGGCTGGCACA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCGCCCAAGGTCCTATCTaGGCCGCATCTCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPAQGPI*AASLCF
Trigger: GAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGC...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGCCCAAGGTCCTATCTaGGCCGCATCTCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPAQGPI*AASLCF
Trigger: GAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS GCA 90 bp CAGACATCCTCTCAGGCAGCAGCTAAGATCGGCACATTGCAGTCCTaGAGAGACAGCAGAGGGTCAGCCCTGAAAGAGCCCCACACAGGC +
Preference number: 5 (lower is better)
Translates to: QTSSQAAAKIGTLQS*RDSRGSALKEPHTG
Trigger: GCCTGTGTGGGGCTCTTTCAGGGCTGACCCTCTGCTGTCTCTGCAGGACTGCAATGTGCCGATCTTAGCTGCTGCCTGAGAGGATGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517339.5
CDS CCA 90 bp TCCAGGATTTGCCGCATTTTGACCTTTTCAGCCTCCCACAGCTGCTaGGCCTCTTCTCGGCTGCTGGGTTGGATGAAGTCCTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SRICRILTFSASHSC*ASSRLLGWMKSSSR
Trigger: GCGGGAGGAGGACTTCATCCAACCCAGCAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CAA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGCTAAGATCGGCACATaGCAGTCCCAGGGAGGCGCG +
Preference number: 5 (lower is better)
Translates to: EGRRGRERNSLVPKSACHAKIGT*QSQGGA
Trigger: CGCGCCTCCCTGGGACTGCAATGTGCCGATCTTAGC...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTTGTGGGGCATATCCTaGAAGAACCGCCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPLWGIS*KNRLSS
Trigger: GGAGCTCAGGCGGTTCTTCAAGGATATGCCCCACAA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTGTCTCCTGGTCGATGTaGGCGAAGCCGGCGAGAGTG +
Preference number: 5 (lower is better)
Translates to: QEESGFGPRSYLGRISLLVSWSM*AKPARV
Trigger: CACTCTCGCCGGCTTCGCCAACATCGACCAGGAGAC...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATGCTAGGGATGAGGTTTaGATGGACAAGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHARDEV*MDKAWG
Trigger: CCCCCAGGCCTTGTCCATCAAAACCTCATCCCTAGC...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCGGACAGAGATCAGGCTaGGGCAGCCGGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVGQRSG*GSRSPF
Trigger: GAAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTCC...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTTAGGTCGGCTGGGCTaGGGTGGGGGTTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPLGRLG*GGGSWK
Trigger: CTTCCAGGAACCCCCACCCAAGCCCAGCCGACCTAA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCAGGATTTGCCGCATTTaGACCTTTTCAGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPRICRI*TFSASH
Trigger: GTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCT...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCGCCAGCCGCATCTTGTaGATGAGCTCTGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESASRIL*MSSARS
Trigger: AGACCTGGCAGAGCTCATCAACAAGATGCGGCTGGC...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 90 bp GGATACGCACGTCCTCCTTTTCCACATCTACTGGTACCACCACCATaGGCTCTGCAGGGCCTTCAGGCCGGCGTAACGTGCCCAACTTTA +
Preference number: 5 (lower is better)
Translates to: GYARPPFPHLLVPPP*ALQGLQAGVTCPTL
Trigger: TAAAGTTGGGCACGTTACGCCGGCCTGAAGGCCCTGCAGAGCCCATGGTGGTGGTACCAGTAGATGTGGAAAAGGAGGACGTGCGTATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521164.5
ENST00000522338.5
ENST00000522517.5
CDS CCA 90 bp TCCAGGATTTGCCGCATTTTGACCTTTTCAGCCTCCCACAGCTGCTaGGCCTCTTCTCGGCTGCTGGGTTGGATGAAGTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SRICRILTFSASHSC*ASSRLLGWMKSSSW
Trigger: CCAGGAGGAGGACTTCATCCAACCCAGCAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397497.8
ENST00000420218.3
ENST00000517339.5
CDS CCA 90 bp CCTGATGGACCTGATCTGCTTGAACTCGGCCAGGCAGGTGGGCTGTaGGAAAAGAAGGGGGAGCTTCAGACCATCCCACTACCAGGACTA +
Preference number: 5 (lower is better)
Translates to: PDGPDLLELGQAGGL*EKKGELQTIPLPGL
Trigger: TAGTCCTGGTAGTGGGATGGTCTGAAGCTCCCCCTTCTTTTCCCACAGCCCACCTGCCTGGCCGAGTTCAAGCAGATCAGGTCCATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461615.1
CDS-3UTR CAA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCTTGTGGGGCATATCCTaGAAGAACCGCCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESLWGIS*KNRLSS
Trigger: GGAGCTCAGGCGGTTCTTCAAGGATATGCCCCACAA...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTATGGACCTGATCTGCTaGAACTCGGCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSMDLIC*NSARQV
Trigger: CACCTGCCTGGCCGAGTTCAAGCAGATCAGGTCCAT...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTATGGACCTGATCTGCTaGAACTCGGCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGMDLIC*NSARQV
Trigger: CACCTGCCTGGCCGAGTTCAAGCAGATCAGGTCCAT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTCTGGGGACATCCATTaGATGGGGAGACGAGTCACA +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPSGDIH*MGRRVT
Trigger: TGTGACTCGTCTCCCCATCAAATGGATGTCCCCAGA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTCTGGGGACATCCATTaGATGGGGAGACGAGTCACA +
Preference number: 5 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSGDIH*MGRRVT
Trigger: TGTGACTCGTCTCCCCATCAAATGGATGTCCCCAGA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGACAGAGATCAGGCTaGGGCAGCCGGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPGQRSG*GSRSPF
Trigger: GAAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTCC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCAGCCAGGAGGTTGGTTaGCGGAGGGGGTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVSQEVG*RRGSVL
Trigger: AAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCT...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCATTTGGAGCCAGGAGGTaGGTTTGCGGAGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPFGARR*VCGGGL
Trigger: CAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAA...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATTTTGGAGCCAGGAGGTaGGTTTGCGGAGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: EGRRGRERNSLVPKSACHFGARR*VCGGGL
Trigger: CAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAA...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAAGCTCTGCCAGGTCTTaGTTGAGCAGTTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRSSARS*LSSFWV
Trigger: CACCCAGAAACTGCTCAACAAAGACCTGGCAGAGCT...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCGCCAGCCGCATCTTGTaGATGAGCTCTGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVASRIL*MSSARS
Trigger: AGACCTGGCAGAGCTCATCAACAAGATGCGGCTGGC...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGCGTCGAGCAGGTTCTaGGCGTCCACAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPASSRF*ASTARV
Trigger: CACCCTGGCTGTGGACGCCAAGAACCTGCTCGACGC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATAGATTGGCCAGAACCTaGGCCTGGTCCACAGCGTCG +
Preference number: 5 (lower is better)
Translates to: EGRRGRERNSLVPKSACHRLART*AWSTAS
Trigger: CGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATCT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCCTCTGAGCCATCTTaGTCACCGTCACCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGPSEPS*SPSPCV
Trigger: GACACAGGGTGACGGTGACAAAGATGGCTCAGAGGG...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCAGGAAGAGAGCGGATTaGGCCCAAGGTCCTATCTTG +
Preference number: 5 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPRKRAD*AQGPIL
Trigger: CAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCT...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 90 bp GGTAGGCCATGGCTTTGCATATCTGCAGTGAGTACAGCACGAGGGTaGGCACCTTCAGGGAGTTCTTGTTCCGCTCCAGGTAGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: GRPWLCISAVSTARG*APSGSSCSAPGSGP
Trigger: TGGGCCACTACCTGGAGCGGAACAAGAACTCCCTGAAGGTGCTCACCCTCGTGCTGTACTCACTGCAGATATGCAAAGCCATGGCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000495097.1
ENST00000517339.5
CDS TCA 90 bp GTGGCGTTTGAAGACATTGTGCCGGTGGAGAGGTGGGGTGTGCAGTaGGTTAACGGGAGATGGATACTCCATAGGGCTGGTGAGCGTAGG +
Preference number: 5 (lower is better)
Translates to: VAFEDIVPVERWGVQ*VNGRWILHRAGERR
Trigger: CCTACGCTCACCAGCCCTATGGAGTATCCATCTCCCGTTAACTCACTGCACACCCCACCTCTCCACCGGCACAATGTCTTCAAACGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS TCA 90 bp CCTCCACCATCTGCTTCTGCTGTTTGTCCAGGATTTGCCGCATTTTaGCCTTTTCAGCCTCCCACAGCTGCTGGGCCTCTTCTCGGCTGC +
Preference number: 5 (lower is better)
Translates to: PPPSASAVCPGFAAF*PFQPPTAAGPLLGC
Trigger: GCAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAGCAGAAGCAGATGGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 90 bp CGGAAGCAGGAAGTTGGCATCTCTGGTTTCTCCCATCCGCGGGCCTaGGGTTCCCGGGGATTGGTTAAGGTAGAGGCTCCTTTTCCCATT +
Preference number: 5 (lower is better)
Translates to: RKQEVGISGFSHPRA*GSRGLVKVEAPFPI
Trigger: AATGGGAAAAGGAGCCTCTACCTTAACCAATCCCCGGGAACCTCAGGCCCGCGGATGGGAGAAACCAGAGATGCCAACTTCCTGCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS GCA 90 bp TGGATGAAGTCCTCCTCCCGCATGCTGTGGCGTTTGAAGACATTGTaGCGGTGGAGAGGTGGGGTGTGCAGTGAGTTAACGGGAGATGGA +
Preference number: 5 (lower is better)
Translates to: WMKSSSRMLWRLKTL*RWRGGVCSELTGDG
Trigger: TCCATCTCCCGTTAACTCACTGCACACCCCACCTCTCCACCGGCACAATGTCTTCAAACGCCACAGCATGCGGGAGGAGGACTTCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS GCA 90 bp TTGTCCAGGATTTGCCGCATTTTGACCTTTTCAGCCTCCCACAGCTaGTGGGCCTCTTCTCGGCTGCTGGGTTGGATGAAGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSRICRILTFSASHS*WASSRLLGWMKSSS
Trigger: GGAGGAGGACTTCATCCAACCCAGCAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 90 bp AAGTCCTCCTCCCGCATGCTGTGGCGTTTGAAGACATTGTGCCGGTaGAGAGGTGGGGTGTGCAGTGAGTTAACGGGAGATGGATACTCC +
Preference number: 5 (lower is better)
Translates to: KSSSRMLWRLKTLCR*RGGVCSELTGDGYS
Trigger: GGAGTATCCATCTCCCGTTAACTCACTGCACACCCCACCTCTCCACCGGCACAATGTCTTCAAACGCCACAGCATGCGGGAGGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCTGGCAAGTAGCGGATTaGAAGGTCATACCTCCACTC +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPWQVAD*KVIPPL
Trigger: GAGTGGAGGTATGACCTTCAAATCCGCTACTTGCCA...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGTCGTTCCGGAGCTGTaGGTAAAAATAGAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPVVPEL*VKIEQR
Trigger: ACGCTGCTCTATTTTTACCAACAGCTCCGGAACGAC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTTCTTGTCAAGTGCATaGTGGGGCATATCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPFLSSA*WGISLK
Trigger: CTTCAAGGATATGCCCCACAATGCACTTGACAAGAA...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCTCTCCTGCATCTGCTTaGGGAAAAACAAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPSPASA*GKTSPA
Trigger: GGCTGGACTTGTTTTTCCCAAAGCAGATGCAGGAGA...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGTCTCCTGGTCGATGTaGGCGAAGCCGGCGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNVSWSM*AKPARV
Trigger: CACTCTCGCCGGCTTCGCCAACATCGACCAGGAGAC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGCTAGGGATGAGGTTTaGATGGACAAGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPARDEV*MDKAWG
Trigger: CCCCCAGGCCTTGTCCATCAAAACCTCATCCCTAGC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATACCCCGATGACATCCTaGTTCTCCAGCCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHTPMTS*FSSQKK
Trigger: CTTCTTCTGGCTGGAGAACAAGGATGTCATCGGGGT...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCAGCCAGGAGGTTGGTTaGCGGAGGGGGTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPSQEVG*RRGSVL
Trigger: AAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCGCATGCTGTGGCGTTaGAAGACATTGTGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPRMLWR*KTLCRW
Trigger: CCACCGGCACAATGTCTTCAAACGCCACAGCATGCG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCCTGTTTGTCCAGGATTaGCCGCATTTTGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPLFVQD*PHFDLF
Trigger: GAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAG...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAACCAGCTCCATGACATaGAGGTACACCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRTSSMT*RYTRSS
Trigger: TGATGACCTGGTGTACCTCAATGTCATGGAGCTGGT...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCTCTGCCAGGTCTTaGTTGAGCAGTTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHSSARS*LSSFWV
Trigger: CACCCAGAAACTGCTCAACAAAGACCTGGCAGAGCT...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTGTGCCAGCCGCATCTaGTTGATGAGCTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPCASRI*LMSSAR
Trigger: CCTGGCAGAGCTCATCAACAAGATGCGGCTGGCACA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACCCTCTGAGCCATCTTaGTCACCGTCACCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPPSEPS*SPSPCV
Trigger: GACACAGGGTGACGGTGACAAAGATGGCTCAGAGGG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTGGACTCCCAATTAGCTaGTTCCTGGACTGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGGLPIS*FLDCAP
Trigger: TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCC...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGACCCCTGATGCTTGGTTaGTTGACAACACAGCATCCT +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRPLMLG*LTTQHP
Trigger: AGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGG...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCCCCTGATGCTTGGTTaGTTGACAACACAGCATCCT +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPPLMLG*LTTQHP
Trigger: AGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS GCA 90 bp AGACACTCATACTTGTCCTGCACCTCACCCACCGTCATCTGTGGGTaGAGCCAGTGGATCTCATCGGACTTCATGTGCTTCAGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RHSYLSCTSPTVICG*SQWISSDFMCFSLS
Trigger: GCTGAGGCTGAAGCACATGAAGTCCGATGAGATCCACTGGCTGCACCCACAGATGACGGTGGGTGAGGTGCAGGACAAGTATGAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000522517.5
CDS GCA 90 bp ATGACGCACTCCTCCTCCCTGAGCGAGGCGTACTGCTGGAAGGTCTaGTGGATCATCTTCCGGAACTGTTTGGGCTTTAAGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: MTHSSSLSEAYCWKV*WIIFRNCLGFKFSC
Trigger: GCAGGAGAACTTAAAGCCCAAACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS GCA 90 bp ATGCTGTGGCGTTTGAAGACATTGTGCCGGTGGAGAGGTGGGGTGTaGAGTGAGTTAACGGGAGATGGATACTCCATAGGGCTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: MLWRLKTLCRWRGGV*SELTGDGYSIGLVS
Trigger: GCTCACCAGCCCTATGGAGTATCCATCTCCCGTTAACTCACTGCACACCCCACCTCTCCACCGGCACAATGTCTTCAAACGCCACAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS CCA 90 bp GTGCAGACACTCATACTTGTCCTGCACCTCACCCACCGTCATCTGTaGGTGCAGCCAGTGGATCTCATCGGACTTCATGTGCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: VQTLILVLHLTHRHL*VQPVDLIGLHVLQP
Trigger: AGGCTGAAGCACATGAAGTCCGATGAGATCCACTGGCTGCACCCACAGATGACGGTGGGTGAGGTGCAGGACAAGTATGAGTGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000522517.5
CDS CCA 90 bp ACGCACTCCTCCTCCCTGAGCGAGGCGTACTGCTGGAAGGTCTGCTaGATCATCTTCCGGAACTGTTTGGGCTTTAAGTTCTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: THSSSLSEAYCWKVC*IIFRNCLGFKFSCI
Trigger: GATGCAGGAGAACTTAAAGCCCAAACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS-3UTR CAA 90 bp AGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATTGGCAAGTAGCGGATTaGAAGGTCATACCTCCACTC +
Preference number: 5 (lower is better)
Translates to: RQQQSPSEPSLSPSPCVHWQVAD*KVIPPL
Trigger: GAGTGGAGGTATGACCTTCAAATCCGCTACTTGCCA...ATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCATCTTCCGGAACTGTTaGGGCTTTAAGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPIFRNC*GFKFSC
Trigger: GCAGGAGAACTTAAAGCCCAAACAGTTCCGGAAGAT...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCAAGCCGGCGAGAGTGTaGAAGAACTTCATGACGCAC +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVKPARV*KNFMTH
Trigger: GTGCGTCATGAAGTTCTTCAACACTCTCGCCGGCTT...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTCTCCCCTTTGTGATTaGTGTAGACACCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: ERASCKVAREGDSPWPSPSPLCD*CRHLHR
Trigger: TCTATGAAGGTGTCTACACAAATCACAAAGGGGAGA...GGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACGCCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGAAGAGTGCAGTCTTTCTaGCAGGTCTTGACAGCTACA +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRRVQSF*QVLTAT
Trigger: TGTAGCTGTCAAGACCTGCAAGAAAGACTGCACTCT...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCCTCATGAACTTCTCCTaGTTGTCCAGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPLMNFS*LSRVQS
Trigger: AGACTGCACTCTGGACAACAAGGAGAAGTTCATGAG...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp TCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCACCAGCTCCATGACATaGAGGTACACCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: SPSEPSLSPSPCVHSPESTSSMT*RYTRSS
Trigger: TGATGACCTGGTGTACCTCAATGTCATGGAGCTGGT...GGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTAGGAAGAGAGCGGATTaGGCCCAAGGTCCTATCTTG +
Preference number: 5 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSRKRAD*AQGPIL
Trigger: CAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCT...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGCTAAGATCGGCACATaGCAGTCCTGCAGAGACAGC +
Preference number: 5 (lower is better)
Translates to: EGRRGRERNSLVPKSACHAKIGT*QSCRDS
Trigger: GCTGTCTCTGCAGGACTGCAATGTGCCGATCTTAGC...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517339.5
CDS TCA 90 bp GCAGTTGATGCTCTCCAGGTAGGCCATGGCTTTGCATATCTGCAGTaGGTACAGCACGAGGGTGAGCACCTTCAGGGAGTTCTTGTTCCG +
Preference number: 5 (lower is better)
Translates to: AVDALQVGHGFAYLQ*VQHEGEHLQGVLVP
Trigger: CGGAACAAGAACTCCCTGAAGGTGCTCACCCTCGTGCTGTACTCACTGCAGATATGCAAAGCCATGGCCTACCTGGAGAGCATCAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000495097.1
ENST00000517339.5
CDS CCA 90 bp GTGGGCTCCTCTTCAATGATGCCGATCAGCTTCACGATGTGCGGGTaGTCGAGGTTCTTCATGATCACTGCCTCGCTCATGAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: VGSSSMMPISFTMCG*SRFFMITASLMNFS
Trigger: GGAGAAGTTCATGAGCGAGGCAGTGATCATGAAGAACCTCGACCACCCGCACATCGTGAAGCTGATCGGCATCATTGAAGAGGAGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 90 bp GGTAAGTCGGCCGGGCAGGTAGGTGTGCAACGGCTCCGGAGGCTGTaGCTGGATCAGAAGAAGGAGAAAACTGTAATGAAAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GKSAGQVGVQRLRRL*LDQKKEKTVMKKAF
Trigger: AAAGGCCTTTTTCATTACAGTTTTCTCCTTCTTCTGATCCAGCCACAGCCTCCGGAGCCGTTGCACACCTACCTGCCCGGCCGACTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS CCA 90 bp GAAATTAACTCTGAATCCAGGAAGCGGGCAGGGGAAGGAACCTCCTaGTCTCCCTGGTTTTGCAGTAGTCAGGGACAGCACTGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: EINSESRKRAGEGTS*SPWFCSSQGQHCCP
Trigger: GGGACAACAGTGCTGTCCCTGACTACTGCAAAACCAGGGAGACCAGGAGGTTCCTTCCCCTGCCCGCTTCCTGGATTCAGAGTTAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482543.1
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATTCTTGTCAAGTGCATaGTGGGGCATATCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRFLSSA*WGISLK
Trigger: CTTCAAGGATATGCCCCACAATGCACTTGACAAGAA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTTCGAAGTTGGACTTCTaGTCAAGTGCATTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGSKLDF*SSALWG
Trigger: GCCCCACAATGCACTTGACAAGAAGTCCAACTTCGA...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTCTCCTGCATCTGCTTaGGGAAAAACAAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVSPASA*GKTSPA
Trigger: GGCTGGACTTGTTTTTCCCAAAGCAGATGCAGGAGA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATAAGCCGGCGAGAGTGTaGAAGAACTTCATGACGCAC +
Preference number: 5 (lower is better)
Translates to: EGRRGRERNSLVPKSACHKPARV*KNFMTH
Trigger: GTGCGTCATGAAGTTCTTCAACACTCTCGCCGGCTT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATATGGACCTGATCTGCTaGAACTCGGCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHMDLIC*NSARQV
Trigger: CACCTGCCTGGCCGAGTTCAAGCAGATCAGGTCCAT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTATGGACCTGATCTGCTaGAACTCGGCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPMDLIC*NSARQV
Trigger: CACCTGCCTGGCCGAGTTCAAGCAGATCAGGTCCAT...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTCTGGGGACATCCATTaGATGGGGAGACGAGTCACA +
Preference number: 5 (lower is better)
Translates to: QEESGFGPRSYLGRISLLSGDIH*MGRRVT
Trigger: TGTGACTCGTCTCCCCATCAAATGGATGTCCCCAGA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATACCCCGATGACATCCTaGTTCTCCAGCCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: EGRRGRERNSLVPKSACHTPMTS*FSSQKK
Trigger: CTTCTTCTGGCTGGAGAACAAGGATGTCATCGGGGT...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCACCCCGATGACATCCTaGTTCTCCAGCCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPTPMTS*FSSQKK
Trigger: CTTCTTCTGGCTGGAGAACAAGGATGTCATCGGGGT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAGCCAGGAGGTTGGTTaGCGGAGGGGGTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNSQEVG*RRGSVL
Trigger: AAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCT...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTGGCGTTTGAAGACATaGTGCCGGTGGAGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHWRLKT*CRWRGG
Trigger: CCCACCTCTCCACCGGCACAATGTCTTCAAACGCCA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CAA 90 bp CAGGCCCATCCCTCATCTCACTGGCTGCCTGACCCCCAAAACAAAGCTCCTCCCCTGTTTGTCCAGGATTaGCCGCATTTTGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: QAHPSSHWLPDPQNKAPPLFVQD*PHFDLF
Trigger: GAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAG...GGGAGGAGCTTTGTTTTGGGGGTCAGGCAGCCAGTGAGATGAGGGATGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTGTGCCAGCCGCATCTaGTTGATGAGCTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPCASRI*LMSSAR
Trigger: CCTGGCAGAGCTCATCAACAAGATGCGGCTGGCACA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGCCCAAGGTCCTATCTaGGCCGCATCTCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNAQGPI*AASLCF
Trigger: GAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCAGGAAGAGAGCGGATTaGGCCCAAGGTCCTATCTTG +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPRKRAD*AQGPIL
Trigger: CAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCTTCGGAAGCAGGAAGTaGGCATCTCTGGTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPFGSRK*ASLVSP
Trigger: GGGAGAAACCAGAGATGCCAACTTCCTGCTTCCGAA...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS GCA 90 bp TTGAAGAACTTCATGACGCACTCCTCCTCCCTGAGCGAGGCGTACTaGTGGAAGGTCTGCTGGATCATCTTCCGGAACTGTTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LKNFMTHSSSLSEAY*WKVCWIIFRNCLGF
Trigger: AAAGCCCAAACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCGTCATGAAGTTCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CCA 90 bp TCCTTTTCTAGGAGCTCGAAGTTGGACTTCTTGTCAAGTGCATTGTaGGGCATATCCTTGAAGAACCGCCTGAGCTCCAGGCAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SFSRSSKLDFLSSAL*GISLKNRLSSRQPS
Trigger: GCTGGGCTGCCTGGAGCTCAGGCGGTTCTTCAAGGATATGCCCCACAATGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAGAAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CCA 90 bp AAGAACTTCATGACGCACTCCTCCTCCCTGAGCGAGGCGTACTGCTaGAAGGTCTGCTGGATCATCTTCCGGAACTGTTTGGGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: KNFMTHSSSLSEAYC*KVCWIIFRNCLGFK
Trigger: CTTAAAGCCCAAACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCGTCATGAAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CCA 90 bp CCAGACGTCACTGGCTGTCGTGAAGCGTCGGAAGTTAATGGACTCTaGGGACATCCATTTGATGGGGAGACGAGTCACAGAGGCTTTGTA +
Preference number: 5 (lower is better)
Translates to: PDVTGCREASEVNGL*GHPFDGETSHRGFV
Trigger: TACAAAGCCTCTGTGACTCGTCTCCCCATCAAATGGATGTCCCCAGAGTCCATTAACTTCCGACGCTTCACGACAGCCAGTGACGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCCTCCCGTGCATTTGACCAGTTaGAAGTTTTTCCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: PVPGLPISLFLDCAPGPPVHLTS*KFFPGL
Trigger: CAATCCTGGGAAAAACTTCAAACTGGTCAAATGCAC...GGGAGGACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTTGGCAAGTAGCGGATTaGAAGGTCATACCTCCACTC +
Preference number: 5 (lower is better)
Translates to: QEESGFGPRSYLGRISLLWQVAD*KVIPPL
Trigger: GAGTGGAGGTATGACCTTCAAATCCGCTACTTGCCA...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGTCGTTCCGGAGCTGTaGGTAAAAATAGAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPVVPEL*VKIEQR
Trigger: ACGCTGCTCTATTTTTACCAACAGCTCCGGAACGAC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTTGTGGGGCATATCCTaGAAGAACCGCCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPLWGIS*KNRLSS
Trigger: GGAGCTCAGGCGGTTCTTCAAGGATATGCCCCACAA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTTCTAGGAGCTCGAAGTaGGACTTCTTGTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSSRSSK*DFLSSA
Trigger: TGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAGA...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGTCTCCTGGTCGATGTaGGCGAAGCCGGCGAGAGTG +
Preference number: 5 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLVSWSM*AKPARV
Trigger: CACTCTCGCCGGCTTCGCCAACATCGACCAGGAGAC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGTCGTGCAAAGTGGCAAGGGAAGGTGACTCCCCTTGGCCTTCCCCCTGGAAGATCTCCCCTTTGTGATTaGTGTAGACACCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: RRAKWQGKVTPLGLPPGRSPLCD*CRHLHR
Trigger: TCTATGAAGGTGTCTACACAAATCACAAAGGGGAGA...TCTTCCAGGGGGAAGGCCAAGGGGAGTCACCTTCCCTTGCCACTTTGCACGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCAGGATTTGCCGCATTTaGACCTTTTCAGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPRICRI*TFSASH
Trigger: GTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCGTCGAGCAGGTTCTaGGCGTCCACAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAASSRF*ASTARV
Trigger: CACCCTGGCTGTGGACGCCAAGAACCTGCTCGACGC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATGGACTCCCAATTAGCTaGTTCCTGGACTGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNGLPIS*FLDCAP
Trigger: TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCC...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 90 bp GTTCTCAGCACTCCAACCCTTCCCTTCGTACCTGCTGACATCAAATaGGCCCCTTCCCCTCTACCACCAGGAGACTTCAGGGAAATTAAC +
Preference number: 5 (lower is better)
Translates to: VLSTPTLPFVPADIK*APSPLPPGDFREIN
Trigger: GTTAATTTCCCTGAAGTCTCCTGGTGGTAGAGGGGAAGGGGCTCATTTGATGTCAGCAGGTACGAAGGGAAGGGTTGGAGTGCTGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482543.1
CDS-3UTR CAA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCTAAGATCGGCACATaGCAGTCCCAGGGAGGCGCG +
Preference number: 5 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAAKIGT*QSQGGA
Trigger: CGCGCCTCCCTGGGACTGCAATGTGCCGATCTTAGC...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTTCTTGTCAAGTGCATaGTGGGGCATATCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVFLSSA*WGISLK
Trigger: CTTCAAGGATATGCCCCACAATGCACTTGACAAGAA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTATCTTCCGGAACTGTTaGGGCTTTAAGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QEESGFGPRSYLGRISLLIFRNC*GFKFSC
Trigger: GCAGGAGAACTTAAAGCCCAAACAGTTCCGGAAGAT...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAATCTTCCGGAACTGTTaGGGCTTTAAGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPIFRNC*GFKFSC
Trigger: GCAGGAGAACTTAAAGCCCAAACAGTTCCGGAAGAT...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATAAGCCGGCGAGAGTGTaGAAGAACTTCATGACGCAC +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHKPARV*KNFMTH
Trigger: GTGCGTCATGAAGTTCTTCAACACTCTCGCCGGCTT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTAGAGTGCAGTCTTTCTaGCAGGTCTTGACAGCTACA +
Preference number: 5 (lower is better)
Translates to: QEESGFGPRSYLGRISLLRVQSF*QVLTAT
Trigger: TGTAGCTGTCAAGACCTGCAAGAAAGACTGCACTCT...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTATGAACTTCTCCTTGTaGTCCAGAGTGCAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGMNFSL*SRVQSF
Trigger: GAAAGACTGCACTCTGGACAACAAGGAGAAGTTCAT...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTATGAACTTCTCCTTGTaGTCCAGAGTGCAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SPPLSHLCHRHPVSIAQSMNFSL*SRVQSF
Trigger: GAAAGACTGCACTCTGGACAACAAGGAGAAGTTCAT...ACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCACTCATGAACTTCTCCTaGTTGTCCAGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPLMNFS*LSRVQS
Trigger: AGACTGCACTCTGGACAACAAGGAGAAGTTCATGAG...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACACCCCGATGACATCCTaGTTCTCCAGCCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDTPMTS*FSSQKK
Trigger: CTTCTTCTGGCTGGAGAACAAGGATGTCATCGGGGT...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTTAGGTCGGCTGGGCTaGGGTGGGGGTTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFLGRLG*GGGSWK
Trigger: CTTCCAGGAACCCCCACCCAAGCCCAGCCGACCTAA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCTGATGCTTGGTTTGTaGACAACACAGCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPLMLGL*TTQHPV
Trigger: CACAGGATGCTGTGTTGTCAACAAACCAAGCATCAG...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACAGGAAGAGAGCGGATTaGGCCCAAGGTCCTATCTTG +
Preference number: 5 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDRKRAD*AQGPIL
Trigger: CAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCT...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 90 bp CAGTTCCGCATGGCTGGCGAGGCCTCAGAAAACTTACAATCACAGTaGAAGGTGAAGGTGAAGCAAGACACCTCCTTTGCAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: QFRMAGEASENLQSQ*KVKVKQDTSFARIS
Trigger: AGAGATCCTTGCAAAGGAGGTGTCTTGCTTCACCTTCACCTTCCACTGTGATTGTAAGTTTTCTGAGGCCTCGCCAGCCATGCGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS CCA 90 bp CCTTTAGGGCCAATGACCAGGTCCACAGTAATGTTCCATCCTTGCTaGAATAAAAGGAGAGTGGACTGTTGTTCCAGAGCTGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PLGPMTRSTVMFHPC*NKRRVDCCSRAVLP
Trigger: GGGGAGGACAGCTCTGGAACAACAGTCCACTCTCCTTTTATTCCAGCAAGGATGGAACATTACTGTGGACCTGGTCATTGGCCCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CCA 90 bp GCCATGCAGATTGGTCAGTATGGGGGAGCCGGGGTGAGGAGGAACTaGGAGTTTCTCTGGGAGATGAAGAGAGAATCAAACACTATTAAG +
Preference number: 5 (lower is better)
Translates to: AMQIGQYGGAGVRRN*EFLWEMKRESNTIK
Trigger: CTTAATAGTGTTTGATTCTCTCTTCATCTCCCAGAGAAACTCCCAGTTCCTCCTCACCCCGGCTCCCCCATACTGACCAATCTGCATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461615.1
CDS-3UTR CAA 90 bp CAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTGTCTGGACAGTGCATTaGACCAGTTTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: QHPVPGLPISLFLDCAPGVWTVH*TSLKFF
Trigger: GAAAAACTTCAAACTGGTCAAATGCACTGTCCAGAC...ACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTGTCGTTCCGGAGCTGTaGGTAAAAATAGAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPVVPEL*VKIEQR
Trigger: ACGCTGCTCTATTTTTACCAACAGCTCCGGAACGAC...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATGTCGTTCCGGAGCTGTaGGTAAAAATAGAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHVVPEL*VKIEQR
Trigger: ACGCTGCTCTATTTTTACCAACAGCTCCGGAACGAC...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTCGAAGTTGGACTTCTaGTCAAGTGCATTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHSKLDF*SSALWG
Trigger: GCCCCACAATGCACTTGACAAGAAGTCCAACTTCGA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACTCTCCTGCATCTGCTTaGGGAAAAACAAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDSPASA*GKTSPA
Trigger: GGCTGGACTTGTTTTTCCCAAAGCAGATGCAGGAGA...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTCTCCCCTTTGTGATTaGTGTAGACACCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVSPLCD*CRHLHR
Trigger: TCTATGAAGGTGTCTACACAAATCACAAAGGGGAGA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTATGAACTTCTCCTTGTaGTCCAGAGTGCAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: QEESGFGPRSYLGRISLLMNFSL*SRVQSF
Trigger: GAAAGACTGCACTCTGGACAACAAGGAGAAGTTCAT...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAATGAACTTCTCCTTGTaGTCCAGAGTGCAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPMNFSL*SRVQSF
Trigger: GAAAGACTGCACTCTGGACAACAAGGAGAAGTTCAT...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTGGCGTTTGAAGACATaGTGCCGGTGGAGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLWRLKT*CRWRGG
Trigger: CCCACCTCTCCACCGGCACAATGTCTTCAAACGCCA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CAA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGCGCATGCTGTGGCGTTaGAAGACATTGTGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLRMLWR*KTLCRW
Trigger: CCACCGGCACAATGTCTTCAAACGCCACAGCATGCG...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATAGGATTTGCCGCATTTaGACCTTTTCAGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHRICRI*TFSASH
Trigger: GTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACACCAGCTCCATGACATaGAGGTACACCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDTSSMT*RYTRSS
Trigger: TGATGACCTGGTGTACCTCAATGTCATGGAGCTGGT...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCCCCTGATGCTTGGTTaGTTGACAACACAGCATCCT +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPPLMLG*LTTQHP
Trigger: AGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGGCCCAAGGTCCTATCTaGGCCGCATCTCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLAQGPI*AASLCF
Trigger: GAAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGC...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGCTGGACTCTTCCATTaGGATGTTCCACTCTTACCC +
Preference number: 5 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDAGLFH*DVPLLP
Trigger: GGGTAAGAGTGGAACATCCAAATGGAAGAGTCCAGC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS TCA 90 bp GGTAAAAATAGAGCAGCGTGGTCCTGTCCTCCTTCAGGCTCTCCATaGAGTCTTCTGGCAAGTAGCGGATTTGAAGGTCATACCTCCACT +
Preference number: 5 (lower is better)
Translates to: GKNRAAWSCPPSGSP*SLLASSGFEGHTST
Trigger: AGTGGAGGTATGACCTTCAAATCCGCTACTTGCCAGAAGACTTCATGGAGAGCCTGAAGGAGGACAGGACCACGCTGCTCTATTTTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000522517.5
CDS-3UTR CAA 90 bp GAGGGCCGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCTGGACAGTGCATTaGACCAGTTTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: EGRRGRERNSLVPKSACHVWTVH*TSLKFF
Trigger: GAAAAACTTCAAACTGGTCAAATGCACTGTCCAGAC...ATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCGGCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGTCTGGACAGTGCATTaGACCAGTTTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TQHPVPGLPISLFLDCAPVWTVH*TSLKFF
Trigger: GAAAAACTTCAAACTGGTCAAATGCACTGTCCAGAC...TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACTCTAGGAGCTCGAAGTaGGACTTCTTGTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDSRSSK*DFLSSA
Trigger: TGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAGA...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATTCTAGGAGCTCGAAGTaGGACTTCTTGTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHSRSSK*DFLSSA
Trigger: TGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAGA...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATATCTTCCGGAACTGTTaGGGCTTTAAGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHIFRNC*GFKFSC
Trigger: GCAGGAGAACTTAAAGCCCAAACAGTTCCGGAAGAT...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCCAGGTCTCTTTCTTGCAGGTCTaGACAGCTACATTGATTTTC +
Preference number: 5 (lower is better)
Translates to: SILCLDSQLACSWTVPQVSFLQV*TATLIF
Trigger: GAAAATCAATGTAGCTGTCAAGACCTGCAAGAAAGA...GACCTGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCTCATGAACTTCTCCTaGTTGTCCAGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHLMNFS*LSRVQS
Trigger: AGACTGCACTCTGGACAACAAGGAGAAGTTCATGAG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCCCTCTGAGCCATCTTaGTCACCGTCACCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: NFNIHCTRMPGPSLISLAPSEPS*SPSPCV
Trigger: GACACAGGGTGACGGTGACAAAGATGGCTCAGAGGG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCTGATGCTTGGTTTGTaGACAACACAGCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPLMLGL*TTQHPV
Trigger: CACAGGATGCTGTGTTGTCAACAAACCAAGCATCAG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CGAAGAGGAAGGGAAAGGAATAGCTTGGTTCCCAAATCGGCCTGCCATGTCCATCTGATGCTTGGTTTGTaGACAACACAGCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: RRGRERNSLVPKSACHVHLMLGL*TTQHPV
Trigger: CACAGGATGCTGTGTTGTCAACAAACCAAGCATCAG...ATGGACATGGCAGGCCGATTTGGGAACCAAGCTATTCCTTTCCCTTCCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAGGAAGAGAGCGGATTTGGCCCAAGGTCCTATCTTGGCCGCATCTCTCTGCTTAAGTCTGCCAGATCTTaGGAGAGACAAGAATTCTGT +
Preference number: 5 (lower is better)
Translates to: QEESGFGPRSYLGRISLLKSARS*ERQEFC
Trigger: ACAGAATTCTTGTCTCTCCAAAGATCTGGCAGACTT...AAGCAGAGAGATGCGGCCAAGATAGGACCTTGGGCCAAATCCGCTCTCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS GCA 90 bp ATCCCTTTAGGGCCAATGACCAGGTCCACAGTAATGTTCCATCCTTaGTGGAATAAAAGGAGAGTGGACTGTTGTTCCAGAGCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: IPLGPMTRSTVMFHP*WNKRRVDCCSRAVL
Trigger: GAGGACAGCTCTGGAACAACAGTCCACTCTCCTTTTATTCCAGCAAGGATGGAACATTACTGTGGACCTGGTCATTGGCCCTAAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS-3UTR CAA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACTTCTTGTCAAGTGCATaGTGGGGCATATCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDFLSSA*WGISLK
Trigger: CTTCAAGGATATGCCCCACAATGCACTTGACAAGAA...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTCTGGGGACATCCATTaGATGGGGAGACGAGTCACA +
Preference number: 5 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLSGDIH*MGRRVT
Trigger: TGTGACTCGTCTCCCCATCAAATGGATGTCCCCAGA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGGACAGAGATCAGGCTaGGGCAGCCGGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLGQRSG*GSRSPF
Trigger: GAAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTCC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTTTAGGTCGGCTGGGCTaGGGTGGGGGTTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTLGRLG*GGGSWK
Trigger: CTTCCAGGAACCCCCACCCAAGCCCAGCCGACCTAA...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCTGTTTGTCCAGGATTaGCCGCATTTTGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPLFVQD*PHFDLF
Trigger: GAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGAGCTCTGCCAGGTCTTaGTTGAGCAGTTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLSSARS*LSSFWV
Trigger: CACCCAGAAACTGCTCAACAAAGACCTGGCAGAGCT...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CAACACAGCATCCTGTGCCTGGACTCCCAATTAGCTTGTTCCTGGACTGTGCCCAGCAAGACACCTCCTTaGCAAGGATCTCTTATAATT +
Preference number: 5 (lower is better)
Translates to: QHSILCLDSQLACSWTVPSKTPP*QGSLII
Trigger: AATTATAAGAGATCCTTGCAAAGGAGGTGTCTTGCT...GGGCACAGTCCAGGAACAAGCTAATTGGGAGTCCAGGCACAGGATGCTGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTCAACCGTCTATGAAGTaGCTAGTCCTATTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPQPSMK*LVLFSS
Trigger: GGAACTGAATAGGACTAGCAACTTCATAGACGGTTG...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS GCA 90 bp GACAAGAATTCTGTCTTCCAGGGCTATTCAATGCAGAAACATCGGTaGTTTAAGACCCAGCCACTACTTCGGAAGCAGGAAGTTGGCATC +
Preference number: 5 (lower is better)
Translates to: DKNSVFQGYSMQKHR*FKTQPLLRKQEVGI
Trigger: GATGCCAACTTCCTGCTTCCGAAGTAGTGGCTGGGTCTTAAAGCACCGATGTTTCTGCATTGAATAGCCCTGGAAGACAGAATTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS-3UTR CAA 90 bp GGTTCCCAAATCGGCCTGCCATGTCCATATATAAAGCTAGGGGCACCATGTGACGTCTGGACAGTGCATTaGACCAGTTTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GSQIGLPCPYIKLGAPCDVWTVH*TSLKFF
Trigger: GAAAAACTTCAAACTGGTCAAATGCACTGTCCAGAC...GTCACATGGTGCCCCTAGCTTTATATATGGACATGGCAGGCCGATTTGGGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTCGAAGTTGGACTTCTaGTCAAGTGCATTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLSKLDF*SSALWG
Trigger: GCCCCACAATGCACTTGACAAGAAGTCCAACTTCGA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTGTCTCCTGCATCTGCTTaGGGAAAAACAAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ISIYTVQECQAHPSSHWLSPASA*GKTSPA
Trigger: GGCTGGACTTGTTTTTCCCAAAGCAGATGCAGGAGA...CAGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTGTGCCAGCCGCATCTaGTTGATGAGCTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLCASRI*LMSSAR
Trigger: CCTGGCAGAGCTCATCAACAAGATGCGGCTGGCACA...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTAGATTGGCCAGAACCTaGGCCTGGTCCACAGCGTCG +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTRLART*AWSTAS
Trigger: CGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATCT...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTTCTCGGCTGCTGGGTaGGATGAAGTCCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLFSAAG*DEVLLL
Trigger: CAGGAGGAGGACTTCATCCAACCCAGCAGCCGAGAA...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATAAATTTTGGCAAGTAGCGGATTaGAAGGTCATACCTCCACTC +
Preference number: 5 (lower is better)
Translates to: PSGGHMLSVQTKLTLNKFWQVAD*KVIPPL
Trigger: GAGTGGAGGTATGACCTTCAAATCCGCTACTTGCCA...AAATTTATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTTGTGGGGCATATCCTaGAAGAACCGCCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLLWGIS*KNRLSS
Trigger: GGAGCTCAGGCGGTTCTTCAAGGATATGCCCCACAA...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCTAGGGATGAGGTTTaGATGGACAAGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTARDEV*MDKAWG
Trigger: CCCCCAGGCCTTGTCCATCAAAACCTCATCCCTAGC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp GGTCCTCCCTCAGGAGGGCACATGCTGTCAGTCCAGACCAAACTCACATTAAATTCTTTCTTGCAGGTCTaGACAGCTACATTGATTTTC +
Preference number: 5 (lower is better)
Translates to: GPPSGGHMLSVQTKLTLNSFLQV*TATLIF
Trigger: GAAAATCAATGTAGCTGTCAAGACCTGCAAGAAAGA...ATTTAATGTGAGTTTGGTCTGGACTGACAGCATGTGCCCTCCTGAGGGAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp CTCTGCTTCTTCCCCCTGATGCTTGGTTTGTTGACAACACAGCATCCTGTGCCTTCTTTCTTGCAGGTCTaGACAGCTACATTGATTTTC +
Preference number: 5 (lower is better)
Translates to: LCFFPLMLGLLTTQHPVPSFLQV*TATLIF
Trigger: GAAAATCAATGTAGCTGTCAAGACCTGCAAGAAAGA...AGGCACAGGATGCTGTGTTGTCAACAAACCAAGCATCAGGGGGAAGAAGCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTAGGATTTGCCGCATTTaGACCTTTTCAGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: NFNIHCTRMPGPSLISLARICRI*TFSASH
Trigger: GTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCT...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCCAGCCGCATCTTGTaGATGAGCTCTGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTASRIL*MSSARS
Trigger: AGACCTGGCAGAGCTCATCAACAAGATGCGGCTGGC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGGACTCCCAATTAGCTaGTTCCTGGACTGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLGLPIS*FLDCAP
Trigger: TGGGGCACAGTCCAGGAACAAGCTAATTGGGAGTCC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTTCTAGGAGCTCGAAGTaGGACTTCTTGTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: NFNIHCTRMPGPSLISLASRSSK*DFLSSA
Trigger: TGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAGA...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCTCATGAACTTCTCCTaGTTGTCCAGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: NFNIHCTRMPGPSLISLALMNFS*LSRVQS
Trigger: AGACTGCACTCTGGACAACAAGGAGAAGTTCATGAG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTCTGATGCTTGGTTTGTaGACAACACAGCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: NFNIHCTRMPGPSLISLALMLGL*TTQHPV
Trigger: CACAGGATGCTGTGTTGTCAACAAACCAAGCATCAG...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGGCTCCTTTTCCCATTaGCAGCCGGAAGTAGGTTTC +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLGSFSH*QPEVGF
Trigger: GAAACCTACTTCCGGCTGCAAATGGGAAAAGGAGCC...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTCGAAGTTGGACTTCTaGTCAAGTGCATTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLSKLDF*SSALWG
Trigger: GCCCCACAATGCACTTGACAAGAAGTCCAACTTCGA...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTAGCTCTGCCAGGTCTTaGTTGAGCAGTTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTSSARS*LSSFWV
Trigger: CACCCAGAAACTGCTCAACAAAGACCTGGCAGAGCT...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 90 bp GTTTCAATGCTCACAGGAAGGATCCAGTCAAGAGGGAAGAGGTTGTaGCTTTGGACATGCGAATCCATCTTTCTGAGCTTTTATTTCCTA +
Preference number: 5 (lower is better)
Translates to: VSMLTGRIQSRGKRL*LWTCESIFLSFYFL
Trigger: TAGGAAATAAAAGCTCAGAAAGATGGATTCGCATGTCCAAAGTCACAACCTCTTCCCTCTTGACTGGATCCTTCCTGTGAGCATTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519650.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGAGAGTGCAGTCTTTCTaGCAGGTCTTGACAGCTACA +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLRVQSF*QVLTAT
Trigger: TGTAGCTGTCAAGACCTGCAAGAAAGACTGCACTCT...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTACCAGCTCCATGACATaGAGGTACACCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTTSSMT*RYTRSS
Trigger: TGATGACCTGGTGTACCTCAATGTCATGGAGCTGGT...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGGCTTCTTTCTTGCAGGTCTaGACAGCTACATTGATTTTC +
Preference number: 5 (lower is better)
Translates to: NFNIHCTRMPGPSLISLASFLQV*TATLIF
Trigger: GAAAATCAATGTAGCTGTCAAGACCTGCAAGAAAGA...AGCCAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTAGAGTGCAGTCTTTCTaGCAGGTCTTGACAGCTACA +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTRVQSF*QVLTAT
Trigger: TGTAGCTGTCAAGACCTGCAAGAAAGACTGCACTCT...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp ATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGCTGTTTGTCCAGGATTaGCCGCATTTTGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: INFNIHCTRMPGPSLISLLFVQD*PHFDLF
Trigger: GAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAG...CAGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTGTGCATTTGACCAGTTaGAAGTTTTTCCCAGGATTG +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTVHLTS*KFFPGL
Trigger: CAATCCTGGGAAAAACTTCAAACTGGTCAAATGCAC...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS-3UTR CAA 90 bp AATAAATTTCAATATACACTGTACAAGAATGCCAGGCCCATCCCTCATCTCACTTCTCCCCTTTGTGATTaGTGTAGACACCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: NKFQYTLYKNARPIPHLTSPLCD*CRHLHR
Trigger: TCTATGAAGGTGTCTACACAAATCACAAAGGGGAGA...AGTGAGATGAGGGATGGGCCTGGCATTCTTGTACAGTGTATATTGAAATTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 72 bp GACGCTGCCACCAATTCCCTGAGCGCCGGGCAGACCTaGGGGGCGATCTCTGCCATTCCCCCGGCCGCAAAT +
Preference number: 6 (lower is better)
Translates to: DAATNSLSAGQT*GAISAIPPAAN
Trigger: ATTTGCGGCCGGGGGAATGGCAGAGATCGCCCCCCAGGTCTGCCCGGCGCTCAGGGAATTGGTGGCAGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521164.5
CDS GCA 72 bp ATGGCCGATGCTGCAGGGAATGCAGACAGACTCCGCTaGTCCCTGCCCTGGGCGGTGGGCAAGGATGGTGGC +
Preference number: 6 (lower is better)
Translates to: MADAAGNADRLR*SLPWAVGKDGG
Trigger: GCCACCATCCTTGCCCACCGCCCAGGGCAGGGAGCAGCGGAGTCTGTCTGCATTCCCTGCAGCATCGGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CCA 72 bp CTGGATGGACTGTGCGCCCAGCCTCGGGGGCTTCTGTaGGGGCCCTGTGAACTCCAGGTAGCCGACCTCCTT +
Preference number: 6 (lower is better)
Translates to: LDGLCAQPRGLL*GPCELQVADLL
Trigger: AAGGAGGTCGGCTACCTGGAGTTCACAGGGCCCCCACAGAAGCCCCCGAGGCTGGGCGCACAGTCCATCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 72 bp CAGGTGGCCCCCACCCTCCGTCACTCTGCAGGTGGGTaGGCCAGATTGGCCAGAACCTTGGCCTGGTCCACA +
Preference number: 6 (lower is better)
Translates to: QVAPTLRHSAGG*ARLARTLAWST
Trigger: TGTGGACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGGAGGGTGGGGGCCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 72 bp TGGAGAGAGCCAGGTTTCCCCTGGGAAGAGCTCTCCTaGGGTGGTGCTTGTCCCCCGCGAGTGGCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: WREPGFPWEELS*GGACPPRVAWD
Trigger: GTCCCAGGCCACTCGCGGGGGACAAGCACCACCCCAGGAGAGCTCTTCCCAGGGGAAACCTGGCTCTCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522245.1
CDS TCA 72 bp CACCGACGGCAGGTCAGCGAGGTCCTGCTGCCTGAGTaGGAATCTGCAGCGATTGCAGCCTCTCCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: HRRQVSEVLLPE*ESAAIAASPCP
Trigger: GGGGCAGGGAGAGGCTGCAATCGCTGCAGATTCTCACTCAGGCAGCAGGACCTCGCTGACCTGCCGTCGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS GCA 72 bp CCATGGGCTCTGCAGGGCCTTCAGGCCGGCGTAACGTaGCCAACTTTACTCGACTCAGGGGCTCGGACACCC +
Preference number: 6 (lower is better)
Translates to: PWALQGLQAGVT*PTLLDSGARTP
Trigger: GGGTGTCCGAGCCCCTGAGTCGAGTAAAGTTGGGCACGTTACGCCGGCCTGAAGGCCCTGCAGAGCCCATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521164.5
ENST00000522338.5
ENST00000522517.5
CDS GCA 72 bp CCCTCCTCCAGCGGGAGGCACCTGATGGACCTGATCTaGTTGAACTCGGCCAGGCAGGTGGGCTTTGCGTCC +
Preference number: 6 (lower is better)
Translates to: PSSSGRHLMDLI*LNSARQVGFAS
Trigger: GGACGCAAAGCCCACCTGCCTGGCCGAGTTCAAGCAGATCAGGTCCATCAGGTGCCTCCCGCTGGAGGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000519512.5
CDS GCA 72 bp ATGCTGCAGGGAATGCAGACAGACTCCGCTGCTCCCTaGCCTGGGCGGTGGGCAAGGATGGTGGCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: MLQGMQTDSAAP*PGRWARMVALH
Trigger: GTGCAGAGCCACCATCCTTGCCCACCGCCCAGGGCAGGGAGCAGCGGAGTCTGTCTGCATTCCCTGCAGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CCA 72 bp CCACCCTCCGTCACTCTGCAGGTGGGTGGGCCAGATTaGCCAGAACCTTGGCCTGGTCCACAGCGTCGAGCA +
Preference number: 6 (lower is better)
Translates to: PPSVTLQVGGPD*PEPWPGPQRRA
Trigger: TGCTCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGTGACGGAGGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 72 bp AGGTTTCCAGTAACACGGAAGCCCTACTACGCCGCCTaGGAGACCCTTCCGTGCTACCCCGGCCAGGGACCC +
Preference number: 6 (lower is better)
Translates to: RFPVTRKPYYAA*ETLPCYPGQGP
Trigger: GGGTCCCTGGCCGGGGTAGCACGGAAGGGTCTCCCAGGCGGCGTAGTAGGGCTTCCGTGTTACTGGAAACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS GCA 72 bp CCCTCCTCCAGCGGGAGGCACCTGATGGACCTGATCTaGTTGAACTCGGCCAGGCAGGTGGGCTGTGGGAAA +
Preference number: 6 (lower is better)
Translates to: PSSSGRHLMDLI*LNSARQVGCGK
Trigger: TTTCCCACAGCCCACCTGCCTGGCCGAGTTCAAGCAGATCAGGTCCATCAGGTGCCTCCCGCTGGAGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461615.1
CDS CCA 72 bp GCAGGTGGGTGGGCCAGATTGGCCAGAACCTTGGCCTaGTCCACAGCGTCGAGCAGGTTCTTGGCGTCCACA +
Preference number: 6 (lower is better)
Translates to: AGGWARLARTLA*STASSRFLAST
Trigger: TGTGGACGCCAAGAACCTGCTCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 90 bp ACCCTCAGGAACCTGGAACTGCAGCTTTGGAGCCAGGAGGTTGGTTaGCGGAGGGGGTCTGTACTTAGGTCGGCTGGGCTTGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: TLRNLELQLWSQEVG*RRGSVLRSAGLGWG
Trigger: CCCCCACCCAAGCCCAGCCGACCTAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAAGCTGCAGTTCCAGGTTCCTGAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS TCA 72 bp CTTCCACCGACGGCAGGTCAGCGAGGTCCTGCTGCCTaGGTGAGAATCTGCAGCGATTGCAGCCTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: LPPTAGQRGPAA*VRICSDCSLSL
Trigger: CAGGGAGAGGCTGCAATCGCTGCAGATTCTCACTCAGGCAGCAGGACCTCGCTGACCTGCCGTCGGTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS CCA 72 bp ACTCTGCAGGTGGGTGGGCCAGATTGGCCAGAACCTTaGCCTGGTCCACAGCGTCGAGCAGGTTCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: TLQVGGPDWPEP*PGPQRRAGSWR
Trigger: ACGCCAAGAACCTGCTCGACGCTGTGGACCAGGCCAAGGTTCTGGCCAATCTGGCCCACCCACCTGCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 90 bp TCCCAGGCTGCAGGCCTCCCTCCCAGGGCGGAGCTCGGCAAACATTaGGTGCCACGATGGATCTCAGGGAGTGACAAGTCTCAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: SQAAGLPPRAELGKH*VPRWISGSDKSQRQ
Trigger: CTGCCTTTGAGACTTGTCACTCCCTGAGATCCATCGTGGCACCAAATGTTTGCCGAGCTCCGCCCTGGGAGGGAGGCCTGCAGCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412793.5
ENST00000496920.1
CDS TCA 72 bp AGGCAGGGCTTGCACCGAGGCTGGAGCACAGTGGCGTaGTCACAGCTCACTGTAGCCTCACCTTCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: RQGLHRGWSTVA*SQLTVASPSRL
Trigger: GAGCCTAGAAGGTGAGGCTACAGTGAGCTGTGATCACGCCACTGTGCTCCAGCCTCGGTGCAAGCCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS GCA 72 bp GCGAGTGGCCTGGGACTCAATTCCCCTGGCCCAGCTTaGTCTAAGAGGATCTGCTGGGCCAGCCAACAGGAA +
Preference number: 6 (lower is better)
Translates to: ASGLGLNSPGPA*SKRICWASQQE
Trigger: TTCCTGTTGGCTGGCCCAGCAGATCCTCTTAGAGCAAGCTGGGCCAGGGGAATTGAGTCCCAGGCCACTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522245.1
CDS CCA 72 bp CGTCCTCCTTTTCCACATCTACTGGTACCACCACCATaGGCTCTGCAGGGCCTTCAGGCCGGCGTAACGTGC +
Preference number: 6 (lower is better)
Translates to: RPPFPHLLVPPP*ALQGLQAGVTC
Trigger: GCACGTTACGCCGGCCTGAAGGCCCTGCAGAGCCCATGGTGGTGGTACCAGTAGATGTGGAAAAGGAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521164.5
ENST00000522338.5
ENST00000522517.5
CDS CCA 72 bp CAGGCCTCCCTCCCAGGGCGGAGCTCGGCAAACATTTaGTGCCACGATGGATCTCAGGGAGTGACAAGTCTC +
Preference number: 6 (lower is better)
Translates to: QASLPGRSSANI*CHDGSQGVTSL
Trigger: GAGACTTGTCACTCCCTGAGATCCATCGTGGCACCAAATGTTTGCCGAGCTCCGCCCTGGGAGGGAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412793.5
ENST00000496920.1
CDS CCA 72 bp CTTCTACCCAGAGGCCTTGAGGATCTGGTGAAGGCCTaGCTTCCATACCGCTGGCCACTCCCTCCACCCCTA +
Preference number: 6 (lower is better)
Translates to: LLPRGLEDLVKA*LPYRWPLPPPL
Trigger: TAGGGGTGGAGGGAGTGGCCAGCGGTATGGAAGCCAGGCCTTCACCAGATCCTCAAGGCCTCTGGGTAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495097.1
CDS CCA 72 bp GGAGAAAGGGGCAGGATGGCCGCCACTCCTAGCTATTaGAGAGAGCCAGGTTTCCCCTGGGAAGAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: GERGRMAATPSY*REPGFPWEELS
Trigger: GGAGAGCTCTTCCCAGGGGAAACCTGGCTCTCTCCAATAGCTAGGAGTGGCGGCCATCCTGCCCCTTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522245.1
CDS CAA 72 bp GCAGGCCTCCCTCCCAGGGCGGAGCTCGGCAAACATTaGGTGCCACGATGGATCTCAGGGAGTGACAAGTCT +
Preference number: 6 (lower is better)
Translates to: AGLPPRAELGKH*VPRWISGSDKS
Trigger: AGACTTGTCACTCCCTGAGATCCATCGTGGCACCAAATGTTTGCCGAGCTCCGCCCTGGGAGGGAGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412793.5
ENST00000496920.1
CDS CAA 72 bp CTAAGATCGGCACATTGCAGTCCTTGTCCCCACACCTaGCACCTGGCCGCAGGTGGGAAGCCAGTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: LRSAHCSPCPHT*HLAAGGKPVSA
Trigger: GGCACTCACTGGCTTCCCACCTGCGGCCAGGTGCAAGGTGTGGGGACAAGGACTGCAATGTGCCGATCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522517.5
CDS CAA 90 bp CACAGACCCTCAGGAACCTGGAACTGCAGCTTTGGAGCCAGGAGGTaGGTTTGCGGAGGGGGTCTGTACTTAGGTCGGCTGGGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: HRPSGTWNCSFGARR*VCGGGLYLGRLGLG
Trigger: ACCCAAGCCCAGCCGACCTAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAAGCTGCAGTTCCAGGTTCCTGAGGGTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS CAA 90 bp CGGACACCCCAGACATCCTCTCAGGCAGCAGCTAAGATCGGCACATaGCAGTCCTGCAGAGACAGCAGAGGGTCAGCCCTGAAAGAGCCC +
Preference number: 6 (lower is better)
Translates to: RTPQTSSQAAAKIGT*QSCRDSRGSALKEP
Trigger: GGGCTCTTTCAGGGCTGACCCTCTGCTGTCTCTGCAGGACTGCAATGTGCCGATCTTAGCTGCTGCCTGAGAGGATGTCTGGGGTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517339.5
CDS TCA 72 bp ACGGCAAGGAAGGCAGGAGATCATCCACGCTCCCGATaGGCTTCCGCAGGGTCAGCCCCACATTCTTCACCA +
Preference number: 6 (lower is better)
Translates to: TARKAGDHPRSR*ASAGSAPHSSP
Trigger: TGGTGAAGAATGTGGGGCTGACCCTGCGGAAGCTCATCGGGAGCGTGGATGATCTCCTGCCTTCCTTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 72 bp GTGTCACCCACAAGCCCTGCTTCTACCCAGAGGCCTTaGGGATCTGGTGAAGGCCTGGCTTCCATACCGCTG +
Preference number: 6 (lower is better)
Translates to: VSPTSPASTQRP*GSGEGLASIPL
Trigger: CAGCGGTATGGAAGCCAGGCCTTCACCAGATCCTCAAGGCCTCTGGGTAGAAGCAGGGCTTGTGGGTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495097.1
CDS GCA 72 bp ACCTGGAACTGCAGCTTTGGAGCCAGGAGGTTGGTTTaGGGAGGGGGTCTGTACTTAGGTCGGCTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: TWNCSFGARRLV*GGGLYLGRLGL
Trigger: CAAGCCCAGCCGACCTAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAAGCTGCAGTTCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS GCA 72 bp CAGCCAGGGTGTGTGAAGCCGTCAGCATCTGCCTCTTaGACTCCTCACTTAGGGAGGTCACGGCGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: QPGCVKPSASAS*TPHLGRSRRSA
Trigger: AGCAGAACGCCGTGACCTCCCTAAGTGAGGAGTGCAAGAGGCAGATGCTGACGGCTTCACACACCCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000522245.1
CDS GCA 72 bp TTGACTTCCACCGACGGCAGGTCAGCGAGGTCCTGCTaGCTGAGTGAGAATCTGCAGCGATTGCAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: LTSTDGRSARSC*LSENLQRLQPL
Trigger: GAGAGGCTGCAATCGCTGCAGATTCTCACTCAGGCAGCAGGACCTCGCTGACCTGCCGTCGGTGGAAGTCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS GCA 72 bp TCCTGGAACTGCAGCTTTGGAGCCAGGAGGTTGGTTTaGGGAGGGGGTCTGTACTTAGGTCGGCTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: SWNCSFGARRLV*GGGLYLGRLGL
Trigger: CAAGCCCAGCCGACCTAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAAGCTGCAGTTCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397497.8
ENST00000420218.3
ENST00000517339.5
CDS GCA 72 bp GTGGAGGGAGCGGAGGGGAAGCTGGCCTGCCCCACATaGTCTGAATTAAATCATGGCCGATGCTGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: VEGAEGKLACPT*SELNHGRCCRE
Trigger: TTCCCTGCAGCATCGGCCATGATTTAATTCAGAGCATGTGGGGCAGGCCAGCTTCCCCTCCGCTCCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CCA 72 bp GTCCCAGCAGCGGGTCATGAGGGTATAAAGGACCGGTaGACAGAGATCAGGCTTGGGCAGCCGGTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: VPAAGHEGIKDR*TEIRLGQPVSF
Trigger: AAAGGAGACCGGCTGCCCAAGCCTGATCTCTGTCCACCGGTCCTTTATACCCTCATGACCCGCTGCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 72 bp CAGACCATCCCACTACCAGGACTAGGCCATGCAGATTaGTCAGTATGGGGGAGCCGGGGTGAGGAGGAACTG +
Preference number: 6 (lower is better)
Translates to: QTIPLPGLGHAD*SVWGSRGEEEL
Trigger: CAGTTCCTCCTCACCCCGGCTCCCCCATACTGACCAATCTGCATGGCCTAGTCCTGGTAGTGGGATGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461615.1
CDS CCA 72 bp AGGAAGCGGGCAGGGGAAGGAACCTCCTGGTCTCCCTaGTTTTGCAGTAGTCAGGGACAGCACTGTTGTCCC +
Preference number: 6 (lower is better)
Translates to: RKRAGEGTSWSP*FCSSQGQHCCP
Trigger: GGGACAACAGTGCTGTCCCTGACTACTGCAAAACCAGGGAGACCAGGAGGTTCCTTCCCCTGCCCGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482543.1
CDS CAA 72 bp GGTTGGATGAAGTCCTCCTCCCGCATGCTGTGGCGTTaGAAGACATTGTGCCGGTGGAGAGGTGGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: GWMKSSSRMLWR*KTLCRWRGGVC
Trigger: GCACACCCCACCTCTCCACCGGCACAATGTCTTCAAACGCCACAGCATGCGGGAGGAGGACTTCATCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS CAA 72 bp CTCCTGGAACTGCAGCTTTGGAGCCAGGAGGTTGGTTaGCGGAGGGGGTCTGTACTTAGGTCGGCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: LLELQLWSQEVG*RRGSVLRSAGL
Trigger: AAGCCCAGCCGACCTAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAAGCTGCAGTTCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397497.8
ENST00000420218.3
ENST00000517339.5
CDS CAA 90 bp AGCTCATTCTTGAGCTCCAGCACGGCCCGCACCAGCTCCATGACATaGAGGTACACCAGGTCATCAGTCCGGTCCAGGTTAGCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: SSFLSSSTARTSSMT*RYTRSSVRSRLAVG
Trigger: GCCCACAGCTAACCTGGACCGGACTGATGACCTGGTGTACCTCAATGTCATGGAGCTGGTGCGGGCCGTGCTGGAGCTCAAGAATGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000482543.1
ENST00000517339.5
ENST00000522245.1
CDS CAA 90 bp CTGGAGGCCAACATTTCAGTGCCTGCTTCAGGCAAGGGGATGCTTTaGACTTCCACCGACGGCAGGTCAGCGAGGTCCTGCTGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: LEANISVPASGKGML*TSTDGRSARSCCLS
Trigger: ACTCAGGCAGCAGGACCTCGCTGACCTGCCGTCGGTGGAAGTCAAAAGCATCCCCTTGCCTGAAGCAGGCACTGAAATGTTGGCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CAA 90 bp AACATCGGTGCTTTAAGACCCAGCCACTACTTCGGAAGCAGGAAGTaGGCATCTCTGGTTTCTCCCATCCGCGGGCCTGAGGTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: NIGALRPSHYFGSRK*ASLVSPIRGPEVPG
Trigger: CCCGGGAACCTCAGGCCCGCGGATGGGAGAAACCAGAGATGCCAACTTCCTGCTTCCGAAGTAGTGGCTGGGTCTTAAAGCACCGATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS TCA 72 bp GAAGTTGGCATCTCTGGTTTCTCCCATCCGCGGGCCTaGGGTTCCCGGGGATTGGTTAAGGTAGAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: EVGISGFSHPRA*GSRGLVKVEAP
Trigger: AGGAGCCTCTACCTTAACCAATCCCCGGGAACCTCAGGCCCGCGGATGGGAGAAACCAGAGATGCCAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS GCA 72 bp CTTTTGACTTCCACCGACGGCAGGTCAGCGAGGTCCTaGTGCCTGAGTGAGAATCTGCAGCGATTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: LLTSTDGRSARS*CLSENLQRLQP
Trigger: AGGCTGCAATCGCTGCAGATTCTCACTCAGGCAGCAGGACCTCGCTGACCTGCCGTCGGTGGAAGTCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS GCA 72 bp GCCTCCCTCCCAGGGCGGAGCTCGGCAAACATTTGGTaGCACGATGGATCTCAGGGAGTGACAAGTCTCAAA +
Preference number: 6 (lower is better)
Translates to: ASLPGRSSANIW*HDGSQGVTSLK
Trigger: TTTGAGACTTGTCACTCCCTGAGATCCATCGTGGCACCAAATGTTTGCCGAGCTCCGCCCTGGGAGGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412793.5
ENST00000496920.1
CDS GCA 72 bp TCTCAGGCAGCAGCTAAGATCGGCACATTGCAGTCCTaGAGAGACAGCAGAGGGTCAGCCCTGAAAGAGCCC +
Preference number: 6 (lower is better)
Translates to: SQAAAKIGTLQS*RDSRGSALKEP
Trigger: GGGCTCTTTCAGGGCTGACCCTCTGCTGTCTCTGCAGGACTGCAATGTGCCGATCTTAGCTGCTGCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517339.5
CDS CCA 72 bp TGCACCTCACCCACCGTCATCTGTGGGTGCAGCCAGTaGATCTCATCGGACTTCATGTGCTTCAGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: CTSPTVICGCSQ*ISSDFMCFSLS
Trigger: GCTGAGGCTGAAGCACATGAAGTCCGATGAGATCCACTGGCTGCACCCACAGATGACGGTGGGTGAGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000522517.5
CDS CCA 72 bp CCTGATCTGCTTGAACTCGGCCAGGCAGGTGGGCTGTaGGAAAAGAAGGGGGAGCTTCAGACCATCCCACTA +
Preference number: 6 (lower is better)
Translates to: PDLLELGQAGGL*EKKGELQTIPL
Trigger: TAGTGGGATGGTCTGAAGCTCCCCCTTCTTTTCCCACAGCCCACCTGCCTGGCCGAGTTCAAGCAGATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461615.1
CDS CCA 72 bp TCTGAATCCAGGAAGCGGGCAGGGGAAGGAACCTCCTaGTCTCCCTGGTTTTGCAGTAGTCAGGGACAGCAC +
Preference number: 6 (lower is better)
Translates to: SESRKRAGEGTS*SPWFCSSQGQH
Trigger: GTGCTGTCCCTGACTACTGCAAAACCAGGGAGACCAGGAGGTTCCTTCCCCTGCCCGCTTCCTGGATTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482543.1
CDS CCA 72 bp AATTCCCCTGGCCCAGCTTGCTCTAAGAGGATCTGCTaGGCCAGCCAACAGGAAGCGCAGTCCCCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: NSPGPACSKRIC*ASQQEAQSPFL
Trigger: AAGGAAAGGGGACTGCGCTTCCTGTTGGCTGGCCCAGCAGATCCTCTTAGAGCAAGCTGGGCCAGGGGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522245.1
CDS CAA 72 bp TACCTCCACTCGGCTTCCACGTGCAGACACTCATACTaGTCCTGCACCTCACCCACCGTCATCTGTGGGTGC +
Preference number: 6 (lower is better)
Translates to: YLHSASTCRHSY*SCTSPTVICGC
Trigger: GCACCCACAGATGACGGTGGGTGAGGTGCAGGACAAGTATGAGTGTCTGCACGTGGAAGCCGAGTGGAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000522517.5
CDS CAA 72 bp GTCTCCTGGTCGATGTTGGCGAAGCCGGCGAGAGTGTaGAAGAACTTCATGACGCACTCCTCCTCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: VSWSMLAKPARV*KNFMTHSSSLS
Trigger: GCTCAGGGAGGAGGAGTGCGTCATGAAGTTCTTCAACACTCTCGCCGGCTTCGCCAACATCGACCAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000519512.5
ENST00000521000.1
CDS CAA 72 bp AACCTGGAACTGCAGCTTTGGAGCCAGGAGGTTGGTTaGCGGAGGGGGTCTGTACTTAGGTCGGCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: NLELQLWSQEVG*RRGSVLRSAGL
Trigger: AAGCCCAGCCGACCTAAGTACAGACCCCCTCCGCAAACCAACCTCCTGGCTCCAAAGCTGCAGTTCCAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS CAA 72 bp TTGAGCTCCAGCACGGCCCGCACCAGCTCCATGACATaGAGGTACACCAGGTCATCAGTCCGGTCCAGGTTA +
Preference number: 6 (lower is better)
Translates to: LSSSTARTSSMT*RYTRSSVRSRL
Trigger: TAACCTGGACCGGACTGATGACCTGGTGTACCTCAATGTCATGGAGCTGGTGCGGGCCGTGCTGGAGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000482543.1
ENST00000517339.5
ENST00000522245.1
CDS CAA 90 bp GGTTGGATGAAGTCCTCCTCCCGCATGCTGTGGCGTTTGAAGACATaGTGCCGGTGGAGAGGTGGGGTGTGCAGTGAGTTAACGGGAGAT +
Preference number: 6 (lower is better)
Translates to: GWMKSSSRMLWRLKT*CRWRGGVCSELTGD
Trigger: ATCTCCCGTTAACTCACTGCACACCCCACCTCTCCACCGGCACAATGTCTTCAAACGCCACAGCATGCGGGAGGAGGACTTCATCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS GCA 72 bp TTCATGACGCACTCCTCCTCCCTGAGCGAGGCGTACTaGTGGAAGGTCTGCTGGATCATCTTCCGGAACTGT +
Preference number: 6 (lower is better)
Translates to: FMTHSSSLSEAY*WKVCWIIFRNC
Trigger: ACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCGTCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS GCA 72 bp TGCCCCACATGCTCTGAATTAAATCATGGCCGATGCTaGAGGGAATGCAGACAGACTCCGCTGCTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: CPTCSELNHGRC*RECRQTPLLPA
Trigger: GGCAGGGAGCAGCGGAGTCTGTCTGCATTCCCTGCAGCATCGGCCATGATTTAATTCAGAGCATGTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CCA 72 bp CTTGAGGATACGCACGTCCTCCTTTTCCACATCTACTaGTACCACCACCATGGGCTCTGCAGGGCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: LEDTHVLLFHIY*YHHHGLCRAFR
Trigger: CCTGAAGGCCCTGCAGAGCCCATGGTGGTGGTACCAGTAGATGTGGAAAAGGAGGACGTGCGTATCCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521164.5
ENST00000522338.5
ENST00000522517.5
CDS CCA 72 bp ATGACGCACTCCTCCTCCCTGAGCGAGGCGTACTGCTaGAAGGTCTGCTGGATCATCTTCCGGAACTGTTTG +
Preference number: 6 (lower is better)
Translates to: MTHSSSLSEAYC*KVCWIIFRNCL
Trigger: CAAACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAGGGAGGAGGAGTGCGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CCA 72 bp TCCCGCATGCTGTGGCGTTTGAAGACATTGTGCCGGTaGAGAGGTGGGGTGTGCAGTGAGTTAACGGGAGAT +
Preference number: 6 (lower is better)
Translates to: SRMLWRLKTLCR*RGGVCSELTGD
Trigger: ATCTCCCGTTAACTCACTGCACACCCCACCTCTCCACCGGCACAATGTCTTCAAACGCCACAGCATGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS CCA 72 bp GCCGGGCAGGTAGGTGTGCAACGGCTCCGGAGGCTGTaGCTGCCATATAGTTTATCAAGTGTTCACTCTGTG +
Preference number: 6 (lower is better)
Translates to: AGQVGVQRLRRL*LPYSLSSVHSV
Trigger: CACAGAGTGAACACTTGATAAACTATATGGCAGCCACAGCCTCCGGAGCCGTTGCACACCTACCTGCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522338.5
CDS CAA 72 bp GCTTTAAGACCCAGCCACTACTTCGGAAGCAGGAAGTaGGCATCTCTGGTTTCTCCCATCCGCGGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: ALRPSHYFGSRK*ASLVSPIRGPE
Trigger: CTCAGGCCCGCGGATGGGAGAAACCAGAGATGCCAACTTCCTGCTTCCGAAGTAGTGGCTGGGTCTTAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397501.5
ENST00000519650.5
ENST00000522338.5
CDS CAA 72 bp AACATTTCAGTGCCTGCTTCAGGCAAGGGGATGCTTTaGACTTCCACCGACGGCAGGTCAGCGAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: NISVPASGKGML*TSTDGRSARSC
Trigger: GCAGGACCTCGCTGACCTGCCGTCGGTGGAAGTCAAAAGCATCCCCTTGCCTGAAGCAGGCACTGAAATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS CAA 90 bp TCCTCCACCATCTGCTTCTGCTGTTTGTCCAGGATTTGCCGCATTTaGACCTTTTCAGCCTCCCACAGCTGCTGGGCCTCTTCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: SSTICFCCLSRICRI*TFSASHSCWASSRL
Trigger: CAGCCGAGAAGAGGCCCAGCAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAGCAGAAGCAGATGGTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 90 bp CCACTGGTAGTCCTCCACCATCTGCTTCTGCTGTTTGTCCAGGATTaGCCGCATTTTGACCTTTTCAGCCTCCCACAGCTGCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PLVVLHHLLLLFVQD*PHFDLFSLPQLLGL
Trigger: GAGGCCCAGCAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAGCAGAAGCAGATGGTGGAGGACTACCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 72 bp GCTCTCCAGGTAGGCCATGGCTTTGCATATCTGCAGTaGGTACAGCACGAGGGTGAGCACCTTCAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: ALQVGHGFAYLQ*VQHEGEHLQGV
Trigger: AACTCCCTGAAGGTGCTCACCCTCGTGCTGTACTCACTGCAGATATGCAAAGCCATGGCCTACCTGGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000495097.1
ENST00000517339.5
CDS TCA 72 bp GAAGACATTGTGCCGGTGGAGAGGTGGGGTGTGCAGTaGGTTAACGGGAGATGGATACTCCATAGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: EDIVPVERWGVQ*VNGRWILHRAG
Trigger: ACCAGCCCTATGGAGTATCCATCTCCCGTTAACTCACTGCACACCCCACCTCTCCACCGGCACAATGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS TCA 72 bp TATAAACCATGGGGTCCAGGGACTTCTCCTCCTGCCTaGGCCACTGGTAGTCCTCCACCATCTGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: YKPWGPGTSPPA*ATGSPPPSASA
Trigger: AGCAGAAGCAGATGGTGGAGGACTACCAGTGGCTCAGGCAGGAGGAGAAGTCCCTGGACCCCATGGTTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS TCA 72 bp GGTCAGGGAGAGGATCAAGAGAGCCCGCCATTACAATaGGTTCACAGCGGTAGGTCTCCTGGTCGATGTTGG +
Preference number: 6 (lower is better)
Translates to: GQGEDQESPPLQ*VHSGRSPGRCW
Trigger: CCAACATCGACCAGGAGACCTACCGCTGTGAACTCATTGTAATGGCGGGCTCTCTTGATCCTCTCCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397497.8
ENST00000521000.1
CDS TCA 72 bp ACTCCAACCCTTCCCTTCGTACCTGCTGACATCAAATaGGCCCCTTCCCCTCTACCACCAGGAGACTTCAGG +
Preference number: 6 (lower is better)
Translates to: TPTLPFVPADIK*APSPLPPGDFR
Trigger: CCTGAAGTCTCCTGGTGGTAGAGGGGAAGGGGCTCATTTGATGTCAGCAGGTACGAAGGGAAGGGTTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482543.1
CDS TCA 72 bp AGTTCTCAGCACTCCAACCCTTCCCTTCGTACCTGCTaGCATCAAATGAGCCCCTTCCCCTCTACCACCAGG +
Preference number: 6 (lower is better)
Translates to: SSQHSNPSLRTC*HQMSPFPSTTR
Trigger: CCTGGTGGTAGAGGGGAAGGGGCTCATTTGATGTCAGCAGGTACGAAGGGAAGGGTTGGAGTGCTGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482543.1
CDS GCA 72 bp TACTTGTCCTGCACCTCACCCACCGTCATCTGTGGGTaGAGCCAGTGGATCTCATCGGACTTCATGTGCTTC +
Preference number: 6 (lower is better)
Translates to: YLSCTSPTVICG*SQWISSDFMCF
Trigger: GAAGCACATGAAGTCCGATGAGATCCACTGGCTGCACCCACAGATGACGGTGGGTGAGGTGCAGGACAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000522517.5
CDS GCA 72 bp TCCTCCTCCCTGAGCGAGGCGTACTGCTGGAAGGTCTaGTGGATCATCTTCCGGAACTGTTTGGGCTTTAAG +
Preference number: 6 (lower is better)
Translates to: SSSLSEAYCWKV*WIIFRNCLGFK
Trigger: CTTAAAGCCCAAACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAGGGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CCA 72 bp CTCATACTTGTCCTGCACCTCACCCACCGTCATCTGTaGGTGCAGCCAGTGGATCTCATCGGACTTCATGTG +
Preference number: 6 (lower is better)
Translates to: LILVLHLTHRHL*VQPVDLIGLHV
Trigger: CACATGAAGTCCGATGAGATCCACTGGCTGCACCCACAGATGACGGTGGGTGAGGTGCAGGACAAGTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000522517.5
CDS CCA 72 bp GCCGGGCAGGTAGGTGTGCAACGGCTCCGGAGGCTGTaGCTGGATCAGAAGAAGGAGAAAACTGTAATGAAA +
Preference number: 6 (lower is better)
Translates to: AGQVGVQRLRRL*LDQKKEKTVMK
Trigger: TTTCATTACAGTTTTCTCCTTCTTCTGATCCAGCCACAGCCTCCGGAGCCGTTGCACACCTACCTGCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397501.5
CDS CAA 72 bp GAGGTCACGGCGTTCTGCTGTGCCAGCCGCATCTTGTaGATGAGCTCTGCCAGGTCTTTGTTGAGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: EVTAFCCASRIL*MSSARSLLSSF
Trigger: GAAACTGCTCAACAAAGACCTGGCAGAGCTCATCAACAAGATGCGGCTGGCACAGCAGAACGCCGTGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000522245.1
CDS TCA 72 bp TGGCTTTGCATATCTGCAGTGAGTACAGCACGAGGGTaGGCACCTTCAGGGAGTTCTTGTTCCGCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: WLCISAVSTARG*APSGSSCSAPG
Trigger: ACCTGGAGCGGAACAAGAACTCCCTGAAGGTGCTCACCCTCGTGCTGTACTCACTGCAGATATGCAAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000495097.1
ENST00000517339.5
CDS GCA 72 bp CAAGAATACGATTCAGGACCACATCTTCACGGGCAATaGCATACTGTGGACCTCCGGGCCTTCGCAGGGTTT +
Preference number: 6 (lower is better)
Translates to: QEYDSGPHLHGQ*HTVDLRAFAGF
Trigger: AAACCCTGCGAAGGCCCGGAGGTCCACAGTATGGCATTGCCCGTGAAGATGTGGTCCTGAATCGTATTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000519512.5
CDS GCA 72 bp CGTTTGAAGACATTGTGCCGGTGGAGAGGTGGGGTGTaGAGTGAGTTAACGGGAGATGGATACTCCATAGGG +
Preference number: 6 (lower is better)
Translates to: RLKTLCRWRGGV*SELTGDGYSIG
Trigger: CCCTATGGAGTATCCATCTCCCGTTAACTCACTGCACACCCCACCTCTCCACCGGCACAATGTCTTCAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346049.10
ENST00000397501.5
CDS CCA 72 bp TCCTCCCTGAGCGAGGCGTACTGCTGGAAGGTCTGCTaGATCATCTTCCGGAACTGTTTGGGCTTTAAGTTC +
Preference number: 6 (lower is better)
Translates to: SSLSEAYCWKVC*IIFRNCLGFKF
Trigger: GAACTTAAAGCCCAAACAGTTCCGGAAGATGATCCAGCAGACCTTCCAGCAGTACGCCTCGCTCAGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CCA 72 bp TTGATGAGCTCTGCCAGGTCTTTGTTGAGCAGTTTCTaGGTGCCCTCGATCTCTGTCCGTGAAGATGACGGC +
Preference number: 6 (lower is better)
Translates to: LMSSARSLLSSF*VPSISVREDDG
Trigger: GCCGTCATCTTCACGGACAGAGATCGAGGGCACCCAGAAACTGCTCAACAAAGACCTGGCAGAGCTCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
ENST00000522245.1
CDS TCA 72 bp AGAGCAGCGTGGTCCTGTCCTCCTTCAGGCTCTCCATaGAGTCTTCTGGCAAGTAGCGGATTTGAAGGTCAT +
Preference number: 6 (lower is better)
Translates to: RAAWSCPPSGSP*SLLASSGFEGH
Trigger: ATGACCTTCAAATCCGCTACTTGCCAGAAGACTTCATGGAGAGCCTGAAGGAGGACAGGACCACGCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000522517.5
CDS TCA 72 bp TCTGCTTCTGCTGTTTGTCCAGGATTTGCCGCATTTTaGCCTTTTCAGCCTCCCACAGCTGCTGGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: SASAVCPGFAAF*PFQPPTAAGPL
Trigger: AAGAGGCCCAGCAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAGCAGAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 72 bp AGGAGCTCGAAGTTGGACTTCTTGTCAAGTGCATTGTaGGGCATATCCTTGAAGAACCGCCTGAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RSSKLDFLSSAL*GISLKNRLSSR
Trigger: CCTGGAGCTCAGGCGGTTCTTCAAGGATATGCCCCACAATGCACTTGACAAGAAGTCCAACTTCGAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CCA 72 bp TCTTCAATGATGCCGATCAGCTTCACGATGTGCGGGTaGTCGAGGTTCTTCATGATCACTGCCTCGCTCATG +
Preference number: 6 (lower is better)
Translates to: SSMMPISFTMCG*SRFFMITASLM
Trigger: CATGAGCGAGGCAGTGATCATGAAGAACCTCGACCACCCGCACATCGTGAAGCTGATCGGCATCATTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 72 bp ACTGGCTGTCGTGAAGCGTCGGAAGTTAATGGACTCTaGGGACATCCATTTGATGGGGAGACGAGTCACAGA +
Preference number: 6 (lower is better)
Translates to: TGCREASEVNGL*GHPFDGETSHR
Trigger: TCTGTGACTCGTCTCCCCATCAAATGGATGTCCCCAGAGTCCATTAACTTCCGACGCTTCACGACAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CCA 72 bp CTCTGTCCCTCAGGCCTACAGAAGATGAATCTGAACTaGGACAGGCAGGTGGCACTGCTTAACTTTTCCCAC +
Preference number: 6 (lower is better)
Translates to: LCPSGLQKMNLN*DRQVALLNFSH
Trigger: GTGGGAAAAGTTAAGCAGTGCCACCTGCCTGTCCCAGTTCAGATTCATCTTCTGTAGGCCTGAGGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CAA 72 bp ATCTGCTTCTGCTGTTTGTCCAGGATTTGCCGCATTTaGACCTTTTCAGCCTCCCACAGCTGCTGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: ICFCCLSRICRI*TFSASHSCWAS
Trigger: AGAGGCCCAGCAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAGCAGAAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 72 bp GTCCTCCACCATCTGCTTCTGCTGTTTGTCCAGGATTaGCCGCATTTTGACCTTTTCAGCCTCCCACAGCTG +
Preference number: 6 (lower is better)
Translates to: VLHHLLLLFVQD*PHFDLFSLPQL
Trigger: CAGCTGTGGGAGGCTGAAAAGGTCAAAATGCGGCAAATCCTGGACAAACAGCAGAAGCAGATGGTGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 72 bp CTGCCGTCTAGCTTGTCTTCACAACCGTCTATGAAGTaGCTAGTCCTATTCAGTTCCGCATGGCTGGCGAGG +
Preference number: 6 (lower is better)
Translates to: LPSSLSSQPSMK*LVLFSSAWLAR
Trigger: CCTCGCCAGCCATGCGGAACTGAATAGGACTAGCAACTTCATAGACGGTTGTGAAGACAAGCTAGACGGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS CAA 90 bp ACTTCCTTTTCTAGGAGCTCGAAGTTGGACTTCTTGTCAAGTGCATaGTGGGGCATATCCTTGAAGAACCGCCTGAGCTCCAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: TSFSRSSKLDFLSSA*WGISLKNRLSSRQP
Trigger: GGGCTGCCTGGAGCTCAGGCGGTTCTTCAAGGATATGCCCCACAATGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAGAAAAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CAA 90 bp TGTGGGCTCCAAGATTTTGGGGGTTCGGTAGCGAGCATTCCTCTCTaGCTCCATGGCAATGTCCTTCTCCATCTGATAAACGTCACTGAG +
Preference number: 6 (lower is better)
Translates to: CGLQDFGGSVASIPL*LHGNVLLHLINVTE
Trigger: CTCAGTGACGTTTATCAGATGGAGAAGGACATTGCCATGGAGCAAGAGAGGAATGCTCGCTACCGAACCCCCAAAATCTTGGAGCCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 72 bp TCTAGGAGCTCGAAGTTGGACTTCTTGTCAAGTGCATaGTGGGGCATATCCTTGAAGAACCGCCTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: SRSSKLDFLSSA*WGISLKNRLSS
Trigger: GGAGCTCAGGCGGTTCTTCAAGGATATGCCCCACAATGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CCA 72 bp AGCAGGATGGAGGTGATGATCTCCCGGATCTCCGTCTaGACAGTGCATTTGACCAGTTTGAAGTTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: SRMEVMISRISV*TVHLTSLKFFP
Trigger: TGGGAAAAACTTCAAACTGGTCAAATGCACTGTCCAGACGGAGATCCGGGAGATCATCACCTCCATCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521164.5
ENST00000522517.5
CDS CCA 72 bp ATGGCTGGCGAGGCCTCAGAAAACTTACAATCACAGTaGAAGGTGAAGGTGAAGCAAGACACCTCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: MAGEASENLQSQ*KVKVKQDTSFA
Trigger: TGCAAAGGAGGTGTCTTGCTTCACCTTCACCTTCCACTGTGATTGTAAGTTTTCTGAGGCCTCGCCAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS CAA 72 bp CTGCCGTCTAGCTTGTCTTCACAACCGTCTATGAAGTaGCTAGTCCTATTCGGTGCTTTAAGACCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: LPSSLSSQPSMK*LVLFGALRPSH
Trigger: GTGGCTGGGTCTTAAAGCACCGAATAGGACTAGCAACTTCATAGACGGTTGTGAAGACAAGCTAGACGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522338.5
CDS GCA 72 bp TCTGTCTTCCAGGGCTATTCAATGCAGAAACATCGGTaGTTTAAGACCCAGCCACTACTTCGGAAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: SVFQGYSMQKHR*FKTQPLLRKQE
Trigger: TTCCTGCTTCCGAAGTAGTGGCTGGGTCTTAAAGCACCGATGTTTCTGCATTGAATAGCCCTGGAAGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS GCA 72 bp GGGCCAATGACCAGGTCCACAGTAATGTTCCATCCTTaGTGGAATAAAAGGAGAGTGGACTGTTGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GPMTRSTVMFHP*WNKRRVDCCSR
Trigger: TCTGGAACAACAGTCCACTCTCCTTTTATTCCAGCAAGGATGGAACATTACTGTGGACCTGGTCATTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CAA 72 bp GTGATGATCTCCCGGATCTCCGTCTGGACAGTGCATTaGACCAGTTTGAAGTTTTTCCCAGGATTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: VMISRISVWTVH*TSLKFFPGLKL
Trigger: CAGCTTCAATCCTGGGAAAAACTTCAAACTGGTCAAATGCACTGTCCAGACGGAGATCCGGGAGATCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521164.5
ENST00000522517.5
CDS CAA 90 bp TCGAGGTTCTTCATGATCACTGCCTCGCTCATGAACTTCTCCTTGTaGTCCAGAGTGCAGTCTTTCTTGCAGGTCTTGACAGCTACATTG +
Preference number: 6 (lower is better)
Translates to: SRFFMITASLMNFSL*SRVQSFLQVLTATL
Trigger: CAATGTAGCTGTCAAGACCTGCAAGAAAGACTGCACTCTGGACAACAAGGAGAAGTTCATGAGCGAGGCAGTGATCATGAAGAACCTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 90 bp AACTTTCATCTGCCGTCTAGCTTGTCTTCACAACCGTCTATGAAGTaGCTAGTCCTATTCGGTGCTTTAAGACCCAGCCACTACTTCGGA +
Preference number: 6 (lower is better)
Translates to: NFHLPSSLSSQPSMK*LVLFGALRPSHYFG
Trigger: TCCGAAGTAGTGGCTGGGTCTTAAAGCACCGAATAGGACTAGCAACTTCATAGACGGTTGTGAAGACAAGCTAGACGGCAGATGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522338.5
CDS TCA 72 bp CTCACAGGAAGGATCCAGTCAAGAGGGAAGAGGTTGTaGCTTTGGACATGCGAATCCATCTTTCTGAGCTTT +
Preference number: 6 (lower is better)
Translates to: LTGRIQSRGKRL*LWTCESIFLSF
Trigger: AAAGCTCAGAAAGATGGATTCGCATGTCCAAAGTCACAACCTCTTCCCTCTTGACTGGATCCTTCCTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519650.5
CDS GCA 72 bp TTCACAACCGTCTATGAAGTTGCTAGTCCTATTCGGTaGTTTAAGACCCAGCCACTACTTCGGAAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: FTTVYEVASPIR*FKTQPLLRKQE
Trigger: TTCCTGCTTCCGAAGTAGTGGCTGGGTCTTAAAGCACCGAATAGGACTAGCAACTTCATAGACGGTTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522338.5
CDS CCA 72 bp CCAATGACCAGGTCCACAGTAATGTTCCATCCTTGCTaGAATAAAAGGAGAGTGGACTGTTGTTCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: PMTRSTVMFHPC*NKRRVDCCSRA
Trigger: AGCTCTGGAACAACAGTCCACTCTCCTTTTATTCCAGCAAGGATGGAACATTACTGTGGACCTGGTCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397497.8
CDS CAA 72 bp CCCACTTCCTTTTCTAGGAGCTCGAAGTTGGACTTCTaGTCAAGTGCATTGTGGGGCATATCCTTGAAGAAC +
Preference number: 6 (lower is better)
Translates to: PTSFSRSSKLDF*SSALWGISLKN
Trigger: GTTCTTCAAGGATATGCCCCACAATGCACTTGACAAGAAGTCCAACTTCGAGCTCCTAGAAAAGGAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346049.10
ENST00000397501.5
ENST00000412793.5
ENST00000420218.3
ENST00000517339.5
ENST00000521000.1
CDS CAA 72 bp TTCATGATCACTGCCTCGCTCATGAACTTCTCCTTGTaGTCCAGAGTGCAGTCTTTCTTGCAGGTCTTGACA +
Preference number: 6 (lower is better)
Translates to: FMITASLMNFSL*SRVQSFLQVLT
Trigger: TGTCAAGACCTGCAAGAAAGACTGCACTCTGGACAACAAGGAGAAGTTCATGAGCGAGGCAGTGATCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 72 bp TTCTTCATGATCACTGCCTCGCTCATGAACTTCTCCTaGTTGTCCAGAGTGCAGTCTTTCTTGCAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: FFMITASLMNFS*LSRVQSFLQVL
Trigger: CAAGACCTGCAAGAAAGACTGCACTCTGGACAACAAGGAGAAGTTCATGAGCGAGGCAGTGATCATGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 90 bp ATCAAGTGTTCACTCTGTGCCAAGAACTTTCATCTGCCGTCTAGCTaGTCTTCACAACCGTCTATGAAGTTGCTAGTCCTATTCGGTGCT +
Preference number: 6 (lower is better)
Translates to: IKCSLCAKNFHLPSS*SSQPSMKLLVLFGA
Trigger: AGCACCGAATAGGACTAGCAACTTCATAGACGGTTGTGAAGACAAGCTAGACGGCAGATGAAAGTTCTTGGCACAGAGTGAACACTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522338.5
CDS CAA 90 bp ATCAAGTGTTCACTCTGTGCCAAGAACTTTCATCTGCCGTCTAGCTaGTCTTCACAACCGTCTATGAAGTTGCTAGTCCTATTCAGTTCC +
Preference number: 6 (lower is better)
Translates to: IKCSLCAKNFHLPSS*SSQPSMKLLVLFSS
Trigger: GGAACTGAATAGGACTAGCAACTTCATAGACGGTTGTGAAGACAAGCTAGACGGCAGATGAAAGTTCTTGGCACAGAGTGAACACTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5
CDS CAA 72 bp ATGAACTTCTCCTTGTTGTCCAGAGTGCAGTCTTTCTaGCAGGTCTTGACAGCTACATTGATTTTCTCCCCT +
Preference number: 6 (lower is better)
Translates to: MNFSLLSRVQSF*QVLTATLIFSP
Trigger: AGGGGAGAAAATCAATGTAGCTGTCAAGACCTGCAAGAAAGACTGCACTCTGGACAACAAGGAGAAGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346049.10
ENST00000397497.8
ENST00000397501.5
ENST00000420218.3
ENST00000517339.5
CDS CAA 90 bp AATGCTCACAGGAAGGATCCAGTCAAGAGGGAAGAGGTTGTGACTTaGGACATGCGAATCCATCTTTCTGAGCTTTTATTTCCTAATCTG +
Preference number: 6 (lower is better)
Translates to: NAHRKDPVKREEVVT*DMRIHLSELLFPNL
Trigger: CAGATTAGGAAATAAAAGCTCAGAAAGATGGATTCGCATGTCCAAAGTCACAACCTCTTCCCTCTTGACTGGATCCTTCCTGTGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519650.5
CDS CAA 72 bp AGGAAGGATCCAGTCAAGAGGGAAGAGGTTGTGACTTaGGACATGCGAATCCATCTTTCTGAGCTTTTATTT +
Preference number: 6 (lower is better)
Translates to: RKDPVKREEVVT*DMRIHLSELLF
Trigger: AAATAAAAGCTCAGAAAGATGGATTCGCATGTCCAAAGTCACAACCTCTTCCCTCTTGACTGGATCCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519650.5
CDS CAA 90 bp CCTTTGCAAGGATCTCTTATAATTGGGAATAAGTCTGCCAGATCTTaGGAGAGACAAGAATTCTGTCTTCCAGGGCTATTCAATGCAGAA +
Preference number: 6 (lower is better)
Translates to: PLQGSLIIGNKSARS*ERQEFCLPGLFNAE
Trigger: TTCTGCATTGAATAGCCCTGGAAGACAGAATTCTTGTCTCTCCAAAGATCTGGCAGACTTATTCCCAATTATAAGAGATCCTTGCAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397501.5
ENST00000519650.5