RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTH1R (Homo sapiens)

Ensembl gene IDs: ENSG00000160801

Ensembl transcript IDs: ENST00000313049.9, ENST00000418619.5, ENST00000422115.2, ENST00000427125.6, ENST00000428220.1, ENST00000430002.6, ENST00000449590.6, ENST00000490109.1

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACACCATaGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGCT +
Preference number: 1 (lower is better)
Translates to: VPHGGRHWSHLCGTP*GRSYSCCSRCVPFA
Trigger: AGCGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR GCA 90 bp GTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTaGCTTTCGCTTGAAGTCCAGTGCCAGTGTCCAGCGGCTCCAAGA +
Preference number: 1 (lower is better)
Translates to: VGHHGAVAIAAAPAA*LSLEVQCQCPAAPR
Trigger: TCTTGGAGCCGCTGGACACTGGCACTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR GCA 90 bp GCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGCTTGAAGTCCAGTaGCAGTGTCCAGCGGCTCCAAGATTTCTTGATCTCAGCTTGTAC +
Preference number: 1 (lower is better)
Translates to: AIAAAPAACLSLEVQ*QCPAAPRFLDLSLY
Trigger: GTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTGGACACTGGCACTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGCAGCTATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR TCA 90 bp GTTGAAGAGCATCTCATAGTGCATCTGGACTTGCCAGAGCGTCCCTaGGACCTCGGTGTATGGTGTGGCCATGAAGACAATGTAGTGGAC +
Preference number: 1 (lower is better)
Translates to: VEEHLIVHLDLPERP*DLGVWCGHEDNVVD
Trigger: GTCCACTACATTGTCTTCATGGCCACACCATACACCGAGGTCTCAGGGACGCTCTGGCAAGTCCAGATGCACTATGAGATGCTCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR TCA 90 bp TCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCACATGACTGTCTCCCAGCATGGCCAGGCAGCTaGGGGTGGCCGTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: STMSAGPAPSAWSHDCLPAWPGS*GWPLVV
Trigger: CACCACCAACGGCCACCCTCAGCTGCCTGGCCATGC...TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CAA 90 bp TTGAGCAGCTTCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTaGGTCTCCCGCAGCTTGGTGGCGAGCACCCGGACGATATTGATG +
Preference number: 2 (lower is better)
Translates to: LSSFRYCCRVSHRPA*VSRSLVASTRTILM
Trigger: CATCAATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGAAGCTGCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR GCA 90 bp GGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGCTAGCAGCTTCCGGTACTaGTGCCGTGTGTCACACCGG +
Preference number: 2 (lower is better)
Translates to: GTPWGRSYSCCSRCVPFASSFRY*CRVSHR
Trigger: CCGGTGTGACACACGGCAGCAGTACCGGAAGCTGCT...AGCGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR TCA 90 bp GTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGGGATGGGCACCTGGATaGTCCACTTTTTGTTCCCGG +
Preference number: 2 (lower is better)
Translates to: VGHHGAVAIAAAPAACLSGWAPG*STFCSR
Trigger: CCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCC...CGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR CCA 90 bp TCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCACATGACTGTCTCCCATCTCCCGCAGCTTGGTaGCGAGCACCCGGACGATAT +
Preference number: 2 (lower is better)
Translates to: STMSAGPAPSAWSHDCLPSPAAW*RAPGRY
Trigger: ATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGA...TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CAA 90 bp TACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTaGGTGGCGAGCACCCGGACGATATTGATGAAGAGGATGAAGTTG +
Preference number: 2 (lower is better)
Translates to: YCCRVSHRPALVSRS*VASTRTILMKRMKL
Trigger: CAACTTCATCCTCTTCATCAATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR TCA 90 bp GGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTTTGCCAGAGCGTCCCTaGGACCTCGGTGTATGGTGT +
Preference number: 2 (lower is better)
Translates to: GHTCVGHHGAVAIAAAPALPERP*DLGVWC
Trigger: ACACCATACACCGAGGTCTCAGGGACGCTCTGGCAA...AGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR CCA 90 bp GGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGGCCCCAGCCCTGAGTaGGAAATCATTCAACCACCC +
Preference number: 2 (lower is better)
Translates to: GHTCVGHHGAVAIAAAPAGPSPE*EIIQPP
Trigger: GGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC...AGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR TCA 90 bp GGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTATCCCTGGAAGGAGTTaGAGAGCATCTCATAGTGCA +
Preference number: 2 (lower is better)
Translates to: GHTCVGHHGAVAIAAAPAIPGRS*RASHSA
Trigger: TGCACTATGAGATGCTCTTCAACTCCTTCCAGGGAT...AGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CCA 72 bp TCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTTaGTCTCCCGCAGCTTGGTGGCGAGCACCCGGACGA +
Preference number: 3 (lower is better)
Translates to: SGTAAVCHTGRR*SPAAWWRAPGR
Trigger: TCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CCA 72 bp ACCCATCGTCCTTGGGAGCAGCCATGGCAGGTGGTGTaGTCTCGAGGGTCTCCAGGGCTGGGGTCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: THRPWEQPWQVV*SRGSPGLGSLA
Trigger: AGCCAGGGACCCCAGCCCTGGAGACCCTCGAGACCACACCACCTGCCATGGCTGCTCCCAAGGACGATGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR CAA 90 bp TCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCACATGACTGTCTCCCATTGGTCTCCCGCAGCTaGGTGGCGAGCACCCGGACG +
Preference number: 3 (lower is better)
Translates to: STMSAGPAPSAWSHDCLPLVSRS*VASTRT
Trigger: CGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAA...TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR CAA 90 bp GGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTTCACACCGGCCGGCGTaGGTCTCCCGCAGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: GHTCVGHHGAVAIAAAPASHRPA*VSRSLV
Trigger: CACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGA...AGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CCA 72 bp GGGGGCCGACATTGGTCACACTTGTGTGGGACACCATaGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTG +
Preference number: 3 (lower is better)
Translates to: GGRHWSHLCGTP*GRSYSCCSRCV
Trigger: CACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR GCA 72 bp CATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTaGCTTTCGCTTGAAGTCCAGTGCCAGTGTCCAGCG +
Preference number: 3 (lower is better)
Translates to: HGAVAIAAAPAA*LSLEVQCQCPA
Trigger: CGCTGGACACTGGCACTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR CAA 90 bp GTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGATGAAGAGGATGAAGTaGAGCACAATGGAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: VGHHGAVAIAAAPAACLSMKRMK*STMEAR
Trigger: CCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCAT...CGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR CAA 90 bp GTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGCGGCTCCAAGATTTCTaGATCTCAGCTTGTACCTCG +
Preference number: 3 (lower is better)
Translates to: VGHHGAVAIAAAPAACLSRLQDF*ISACTS
Trigger: CGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCG...CGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR TCA 72 bp AGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGCTTaGAGTCCAGTGCCAGTGTCCAGCGGCTCCAAGATT +
Preference number: 3 (lower is better)
Translates to: SYSCCSRCVPFA*SPVPVSSGSKI
Trigger: AATCTTGGAGCCGCTGGACACTGGCACTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR GCA 72 bp GCTGCTCCCGCTGCGTGCCTTTCGCTTGAAGTCCAGTaGCAGTGTCCAGCGGCTCCAAGATTTCTTGATCTC +
Preference number: 3 (lower is better)
Translates to: AAPAACLSLEVQ*QCPAAPRFLDL
Trigger: GAGATCAAGAAATCTTGGAGCCGCTGGACACTGGCACTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR-3UTR CAA 90 bp GGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTTTTCTTGATCTCAGCTaGTACCTCGCCATTGCAGAA +
Preference number: 3 (lower is better)
Translates to: GHTCVGHHGAVAIAAAPAFLDLS*YLAIAE
Trigger: TTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAA...AGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR TCA 72 bp AGTCCAGTGCCAGTGTCCAGCGGCTCCAAGATTTCTTaGTCTCAGCTTGTACCTCGCCATTGCAGAAACAGT +
Preference number: 3 (lower is better)
Translates to: SPVPVSSGSKIS*SQLVPRHCRNS
Trigger: ACTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTGGACACTGGCACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp GCTTCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTGAGCGCCAGGCCGGGTaGGATCCGGGCGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ASGTAAVCHTGRRWSPAAERQAG*DPGGPH
Trigger: ATGGGGACCGCCCGGATCGCACCCGGCCTGGCGCTC...AGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp GCTTCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTGGCGCCCTCGGTACCTaGTGCCAGTGGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASGTAAVCHTGRRWSPAAGALGT*CQWVPP
Trigger: AGGAGGCACCCACTGGCAGCAGGTACCGAGGGCGCC...AGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CAA 72 bp TTCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTaGGTCTCCCGCAGCTTGGTGGCGAGCACCCGGACG +
Preference number: 4 (lower is better)
Translates to: FRYCCRVSHRPA*VSRSLVASTRT
Trigger: CGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp TGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGAGCACCCGGACGCAGCTCCTCCTCGGTaGGGCGCTCAGCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: CVTPAGVGLPQLGGEHPDAAPPR*GAQPHQ
Trigger: TTGATGAGGCTGAGCGCCTCACCGAGGAGGAGCTGC...GTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp GGGGCAGGCCGAGTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACAAGGTCACAGCCACCCTaGAGCCCGCGTAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GAGRVPHGGRHWSHLCGTRSQPP*SPRSRQ
Trigger: CTGCCGGCTACGCGGGCTGCAGGGTGGCTGTGACCT...TGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGGCCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp GTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGGCATGGCCAGGCAGCTaGGGGTGGCCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VGHHGAVAIAAAPAACLSAWPGS*GWPLVV
Trigger: CACCACCAACGGCCACCCTCAGCTGCCTGGCCATGC...CGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp GGGGCAGGCCGAGTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACAGGTGGTGGTAGGGGGTaGAGAGCTGCGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAGRVPHGGRHWSHLCGTGGGRG*RAASGW
Trigger: CCAGCCTGACGCAGCTCTGCACCCCCTACCACCACC...TGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGGCCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp GCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGAGCAGCTGCTCCCGCTGCGTaGCTTTCGCTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AAVCHTGRRWSPAAWWRAAAPAA*LSLEVQ
Trigger: CTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGC...TGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp GGGGCAGGCCGAGTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACACTGGGGTCCCTGGCTTaGCATGGCCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GAGRVPHGGRHWSHLCGTLGSLA*HGQAAE
Trigger: CTCAGCTGCCTGGCCATGCCAAGCCAGGGACCCCAG...TGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGGCCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp GCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGAGCACCCAGCCGAAGACTGTaGAGCCCCACAGGTACTTCT +
Preference number: 4 (lower is better)
Translates to: AAVCHTGRRWSPAAWWRAPSRRL*SPTGTS
Trigger: AGAAGTACCTGTGGGGCTTCACAGTCTTCGGCTGGG...TGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCAGTAGGCGGGGGCTaGGGGGCAGGCCGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLAVGGG*GAGRVP
Trigger: TGGGACTCGGCCTGCCCCTCAGCCCCCGCCTACTGC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCAGTAGGCGGGGGCTaGGGGGCAGGCCGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWAVGGG*GAGRVP
Trigger: TGGGACTCGGCCTGCCCCTCAGCCCCCGCCTACTGC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGAGCACCCGGACGATATTGATGCACCAGCTCCCAGCTaGCATTGCGGTCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: PAGVGLPQLGGEHPDDIDAPAPS*HCGHSV
Trigger: GACGCTGTGACCGCAATGGCAGCTGGGAGCTGGTGC...ATCAATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp CCGAGTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACACCATGGGGGCCCACGTCCTGTTGTaGCCAGGCACCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSPTRGPTLVTLVWDTMGAHVLL*PGTSSQ
Trigger: CTGGGAGCTGGTGCCTGGGCACAACAGGACGTGGGC...CCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp GCTTCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTGGTACCTGCTGCCAGTaGGTGCCTCCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASGTAAVCHTGRRWSPAAGTCCQ*VPPCPP
Trigger: AGGAGGACAAGGAGGCACCCACTGGCAGCAGGTACC...AGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp TACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGGGAACCCATCGTCCTTaGGAGCAGCCATGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: YCCRVSHRPALVSRSLVAGTHRP*EQPWQV
Trigger: CACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCC...CGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCGCGTACGCGGAGCTaGGCACGGGGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWARTRS*ARGSRA
Trigger: TGCTCTGCTGCCCCGTGCTCAGCTCCGCGTACGCGC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCGCGTACGCGGAGCTaGGCACGGGGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLARTRS*ARGSRA
Trigger: TGCTCTGCTGCCCCGTGCTCAGCTCCGCGTACGCGC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGCGTAGCTATAGCTGCTaGTCCCGCTGCGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: YCCRVSHRPALVSRSLVARSYSC*SRCVPF
Trigger: GAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACG...CGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp GTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGGGCCGTAGCTATAGCTaGTGCTCCCGCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: VGHHGAVAIAAAPAACLSGRSYS*CSRCVP
Trigger: AGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCC...CGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp TACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGCAGCCTCATCAAGCGTaGCGCCAGAGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: YCCRVSHRPALVSRSLVAQPHQA*RQSRAQ
Trigger: CTGTGCTCTACTCTGGCGCCACGCTTGATGAGGCTG...CGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CAA 72 bp CGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTaGGTGGCGAGCACCCGGACGATATTGATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RVSHRPALVSRS*VASTRTILMKR
Trigger: CCTCTTCATCAATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CAA 72 bp GGCCGAGTCCCACACGGGGGCCGACATTGGTCACACTaGTGTGGGACACCATGGGGCCGTAGCTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRVPHGGRHWSH*CGTPWGRSYSC
Trigger: GCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428220.1
3UTR CAA 72 bp AGGCCTGAGCAGGAGCCGTTGAGGAACCCATCGTCCTaGGGAGCAGCCATGGCAGGTGGTGTGGTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RPEQEPLRNPSS*GAAMAGGVVSR
Trigger: CCTCGAGACCACACCACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCCTCAACGGCTCCTGCTCAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCGCGTACGCGGAGCTaGGCACGGGGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPARTRS*ARGSRA
Trigger: TGCTCTGCTGCCCCGTGCTCAGCTCCGCGTACGCGC...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCATGGCCAGGCAGCTaGGGGTGGCCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWAWPGS*GWPLVV
Trigger: CACCACCAACGGCCACCCTCAGCTGCCTGGCCATGC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGGCGCCCTCGGTACCTaGTGCCAGTGGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWGALGT*CQWVPP
Trigger: AGGAGGCACCCACTGGCAGCAGGTACCGAGGGCGCC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCGCCCTCGGTACCTaGTGCCAGTGGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLGALGT*CQWVPP
Trigger: AGGAGGCACCCACTGGCAGCAGGTACCGAGGGCGCC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGAGCACCCGGACCCACGGTGTAAATCATaGCCAGGCGGTCAAACACCT +
Preference number: 4 (lower is better)
Translates to: CVTPAGVGLPQLGGEHPDPRCKS*PGGQTP
Trigger: AGGTGTTTGACCGCCTGGGCATGATTTACACCGTGG...GTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGAGGTCACAGCCACCCTaGAGCCCGCGTAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWRSQPP*SPRSRQ
Trigger: CTGCCGGCTACGCGGGCTGCAGGGTGGCTGTGACCT...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGAGGTCACAGCCACCCTaGAGCCCGCGTAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLRSQPP*SPRSRQ
Trigger: CTGCCGGCTACGCGGGCTGCAGGGTGGCTGTGACCT...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp ATGACTGTCTCCCACTCTTCCTGTAGCAGGGCAGGTGGCCGCTCAGGCCCAGAGAGCTTCCGGTACTGCTaGCGTGTGTCACACCGGCCG +
Preference number: 4 (lower is better)
Translates to: MTVSHSSCSRAGGRSGPESFRYC*RVSHRP
Trigger: CGGCCGGTGTGACACACGGCAGCAGTACCGGAAGCT...CTCTGGGCCTGAGCGGCCACCTGCCCTGCTACAGGAAGAGTGGGAGACAGTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp GCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGAGCATTCCATTATGCTGGCTaGCCTCTGCAGGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: AAVCHTGRRWSPAAWWRAFHYAG*PLQDLL
Trigger: AAGGAGGTCCTGCAGAGGCCAGCCAGCATAATGGAA...TGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCACACCGGCCGGCGTTaGTCTCCCGCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLHTGRR*SPAAWW
Trigger: CCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCAGGGCTGGGGTCCCTaGCTTGGCATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLQGWGP*LGMARQ
Trigger: CTGCCTGGCCATGCCAAGCCAGGGACCCCAGCCCTG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCAGGGCTGGGGTCCCTaGCTTGGCATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWQGWGP*LGMARQ
Trigger: CTGCCTGGCCATGCCAAGCCAGGGACCCCAGCCCTG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGCTCCTTGGGAGCAGCCATaGCAGGTGGTGTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: GTPWGRSYSCCSRCVPFAPWEQP*QVVWSR
Trigger: TCGAGACCACACCACCTGCCATGGCTGCTCCCAAGG...AGCGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp ATGACTGTCTCCCACTCTTCCTGTAGCAGGGCAGGTGGCCGCTCAGGCCCAGAGTTTTCGCACTGGGCCTaGGCACGGTGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: MTVSHSSCSRAGGRSGPEFSHWA*ARCSRK
Trigger: CTTCCTGCTGCACCGTGCTCAGGCCCAGTGCGAAAA...CTCTGGGCCTGAGCGGCCACCTGCCCTGCTACAGGAAGAGTGGGAGACAGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGCAGTAGGCGGGGGCTaGGGGGCAGGCCGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICAVGGG*GAGRVP
Trigger: TGGGACTCGGCCTGCCCCTCAGCCCCCGCCTACTGC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGCAGTAGGCGGGGGCTaGGGGGCAGGCCGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIAVGGG*GAGRVP
Trigger: TGGGACTCGGCCTGCCCCTCAGCCCCCGCCTACTGC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp ATGACTGTCTCCCACTCTTCCTGTAGCAGGGCAGGTGGCCGCTCAGGCCCAGAGCTGAGCAGGAGCCGTTaGGGAACCCATCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: MTVSHSSCSRAGGRSGPELSRSR*GTHRPW
Trigger: CCAAGGACGATGGGTTCCTCAACGGCTCCTGCTCAG...CTCTGGGCCTGAGCGGCCACCTGCCCTGCTACAGGAAGAGTGGGAGACAGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGAGCGCCAGGCCGGGTaGGATCCGGGCGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICERQAG*DPGGPH
Trigger: ATGGGGACCGCCCGGATCGCACCCGGCCTGGCGCTC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGAGCACCCGGACGATATTGATAGTCATGACGTCATCTaGATCCACCAGCGCGTACGC +
Preference number: 4 (lower is better)
Translates to: PAGVGLPQLGGEHPDDIDSHDVI*IHQRVR
Trigger: GCGTACGCGCTGGTGGATGCAGATGACGTCATGACT...ATCAATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCCCACGTCCTGTTGTaGCCAGGCACCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLAHVLL*PGTSSQ
Trigger: CTGGGAGCTGGTGCCTGGGCACAACAGGACGTGGGC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CCGAGTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACACCATGGGGCACACTCGCTGTAGTTaGCCCACGTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSPTRGPTLVTLVWDTMGHTRCS*PTSCCA
Trigger: GGCACAACAGGACGTGGGCCAACTACAGCGAGTGTG...CCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTGGTCTCCCGCAGCTTaGTGGCGAGCACCCGGACGA +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWWSPAA*WRAPGR
Trigger: TCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CCGAGTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACACCATGGGGCACGGGGGCCGACATTaGTCACACTTGTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: PSPTRGPTLVTLVWDTMGHGGRH*SHLCGT
Trigger: TGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTG...CCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCTGGGGTCCCTGGCTTaGCATGGCCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLLGSLA*HGQAAE
Trigger: CTCAGCTGCCTGGCCATGCCAAGCCAGGGACCCCAG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGCGCGTACGCGGAGCTaGGCACGGGGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICARTRS*ARGSRA
Trigger: TGCTCTGCTGCCCCGTGCTCAGCTCCGCGTACGCGC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTTCACGGCGCGCAGCATaGAGGACAGGAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GHTCVGHHGAVAIAAAPASRRAA*RTGTGA
Trigger: TGCACCTGTTCCTGTCCTTCATGCTGCGCGCCGTGA...AGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp TTGAGCAGCTTCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCGGATGGGCACCTGGATaGTCCACTTTTTGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSSFRYCCRVSHRPALVSGWAPG*STFCSR
Trigger: CCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCC...GGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGAAGCTGCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGAGCGCCAGGCCGGGTaGGATCCGGGCGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSERQAG*DPGGPH
Trigger: ATGGGGACCGCCCGGATCGCACCCGGCCTGGCGCTC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCCCTCGGTACCTGCTaGCAGTGGGTGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWALGTC*QWVPPC
Trigger: ACAAGGAGGCACCCACTGGCAGCAGGTACCGAGGGC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCCCTCGGTACCTGCTaGCAGTGGGTGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLALGTC*QWVPPC
Trigger: ACAAGGAGGCACCCACTGGCAGCAGGTACCGAGGGC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCTCCCAGCTGCCATTaGGGTCACAGCGTCGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLAPSCH*GHSVGR
Trigger: CCTACCGACGCTGTGACCGCAATGGCAGCTGGGAGC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCACCAGCTCCCAGCTaGCATTGCGGTCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWAPAPS*HCGHSV
Trigger: GACGCTGTGACCGCAATGGCAGCTGGGAGCTGGTGC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGAGCTTCCGGTACTGCTaGCGTGTGTCACACCGGCCG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLSFRYC*RVSHRP
Trigger: CGGCCGGTGTGACACACGGCAGCAGTACCGGAAGCT...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp AGGGGCATGAGCACCAGCGTGGATTTGAGCAGCTTCCGGTACTGCTGCCGTGTGAGCAGCTTCCGGTACTaGTGCCGTGTGTCACACCGG +
Preference number: 4 (lower is better)
Translates to: RGMSTSVDLSSFRYCCRVSSFRY*CRVSHR
Trigger: CCGGTGTGACACACGGCAGCAGTACCGGAAGCTGCT...CACACGGCAGCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGCTCATGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGGCCGTAGCTATAGCTaGTGCTCCCGCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWGRSYS*CSRCVP
Trigger: AGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GCAGCTTCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCCAGGATGGGCACCTaGATGATCCACTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: AASGTAAVCHTGRRWSPAARMGT*MIHFLF
Trigger: GAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGC...TGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGAAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCTGGGGTCCCTGGCTTaGCATGGCCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPLGSLA*HGQAAE
Trigger: CTCAGCTGCCTGGCCATGCCAAGCCAGGGACCCCAG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGCGCGTACGCGGAGCTaGGCACGGGGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSARTRS*ARGSRA
Trigger: TGCTCTGCTGCCCCGTGCTCAGCTCCGCGTACGCGC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTCACGGCGCGCAGCATaGAGGACAGGAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLSRRAA*RTGTGA
Trigger: TGCACCTGTTCCTGTCCTTCATGCTGCGCGCCGTGA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCACGGCGCGCAGCATaGAGGACAGGAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSRRAA*RTGTGA
Trigger: TGCACCTGTTCCTGTCCTTCATGCTGCGCGCCGTGA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGAGAGCACAGCGTCCTTaGCGAAGATGCTCACGGCGC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWRAQRP*RRCSRR
Trigger: GCGCCGTGAGCATCTTCGTCAAGGACGCTGTGCTCT...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCAGCTCCTCCTCGGTaGGGCGCTCAGCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPAAPPR*GAQPHQ
Trigger: TTGATGAGGCTGAGCGCCTCACCGAGGAGGAGCTGC...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCACCAGCGTGGATTTaGGCAGCTTCCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: GHTCVGHHGAVAIAAAPAAPAWI*AASGTA
Trigger: AGCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGC...AGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp CAGCGGCTCCAAGATTTCTTGATCTCAGCTTGTACCTCGCCATTGCAGAAACAGGCAGTAGGCGGGGGCTaGGGGGCAGGCCGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QRLQDFLISACTSPLQKQAVGGG*GAGRVP
Trigger: TGGGACTCGGCCTGCCCCTCAGCCCCCGCCTACTGC...CTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGCATGGCCAGGCAGCTaGGGGTGGCCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIAWPGS*GWPLVV
Trigger: CACCACCAACGGCCACCCTCAGCTGCCTGGCCATGC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCTGAGCAGGAGCCGTTaGGGAACCCATCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWLSRSR*GTHRPW
Trigger: CCAAGGACGATGGGTTCCTCAACGGCTCCTGCTCAG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGATGCTGGCTGGCCTCTaGAGGACCTCCTTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWMLAGL*RTSLSR
Trigger: ACGGCTCAAGGAGGTCCTGCAGAGGCCAGCCAGCAT...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCCTGCTGCCAGTGGGTaGCTCCTTGTCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLPAASG*LLVLLR
Trigger: TCTGAGGAGGACAAGGAGGCACCCACTGGCAGCAGG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCCTGCTGCCAGTGGGTaGCTCCTTGTCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWPAASG*LLVLLR
Trigger: TCTGAGGAGGACAAGGAGGCACCCACTGGCAGCAGG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGAGCAGCTTCCGGTACTaGTGCCGTGTGTCACACCGG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSSFRY*CRVSHR
Trigger: CCGGTGTGACACACGGCAGCAGTACCGGAAGCTGCT...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGAGCAGCTTCCGGTACTaGTGCCGTGTGTCACACCGG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLSSFRY*CRVSHR
Trigger: CCGGTGTGACACACGGCAGCAGTACCGGAAGCTGCT...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCTGCTCCCGCTGCGTaGCTTTCGCTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLAAPAA*LSLEVQ
Trigger: CTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGTACCTGCTGCCAGTaGGTGCCTCCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLGTCCQ*VPPCPP
Trigger: AGGAGGACAAGGAGGCACCCACTGGCAGCAGGTACC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGGGCCGACATTGGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTGGCCAGCACAGGATGTaGTCCCATTCCGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: GADIGHTCVGHHGAVAIAGQHRM*SHSGRQ
Trigger: CTGTCTGCCGGAATGGGACCACATCCTGTGCTGGCC...AGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGGCCAGCACAGGATGTaGTCCCATTCCGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWGQHRM*SHSGRQ
Trigger: CTGTCTGCCGGAATGGGACCACATCCTGTGCTGGCC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCTCCCGCAGCTTGGTaGCGAGCACCCGGACGATAT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSPAAW*RAPGRY
Trigger: ATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCAGGGCTGGGGTCCCTaGCTTGGCATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICQGWGP*LGMARQ
Trigger: CTGCCTGGCCATGCCAAGCCAGGGACCCCAGCCCTG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCAGGGCTGGGGTCCCTaGCTTGGCATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIQGWGP*LGMARQ
Trigger: CTGCCTGGCCATGCCAAGCCAGGGACCCCAGCCCTG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGAGCAGCCATGGCAGGTaGTGTGGTCTCGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSSHGR*CGLEGL
Trigger: GAGACCCTCGAGACCACACCACCTGCCATGGCTGCT...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGAACCCATCGTCCTTaGGAGCAGCCATGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLGTHRP*EQPWQV
Trigger: CACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCCAGCCCCCAGCGCCTaGTCACATGACTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPPAPSA*SHDCLP
Trigger: TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp ATCTGGACTTGCCAGAGCGTCCCTGAGACCTCGGTGTATGGTGTGGCCATGAAGCCAGCCCCCAGCGCCTaGTCACATGACTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: IWTCQSVPETSVYGVAMKPAPSA*SHDCLP
Trigger: TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGG...CTTCATGGCCACACCATACACCGAGGTCTCAGGGACGCTCTGGCAAGTCCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCCACGGGGAGGCCATaGATAGTCCCTGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWATGRP*IVPEQL
Trigger: AAGCTGCTCAGGGACTATCCATGGCCTCCCCGTGGC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTTTTCGCACTGGGCCTaGGCACGGTGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPFSHWA*ARCSRK
Trigger: CTTCCTGCTGCACCGTGCTCAGGCCCAGTGCGAAAA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTCTGCAGGACCTCCTTaGGCCGTTTTTCGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLSAGPP*AVFRTG
Trigger: CCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCTGCAGGACCTCCTTaGGCCGTTTTTCGCACTGGG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSAGPP*AVFRTG
Trigger: CCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTCACGGCGCGCAGCATaGAGGACAGGAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPSRRAA*RTGTGA
Trigger: TGCACCTGTTCCTGTCCTTCATGCTGCGCGCCGTGA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTAGAGCACAGCGTCCTTaGCGAAGATGCTCACGGCGC +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPRAQRP*RRCSRR
Trigger: GCGCCGTGAGCATCTTCGTCAAGGACGCTGTGCTCT...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCACCAGCGTGGATTTaGGCAGCTTCCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLAPAWI*AASGTA
Trigger: AGCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CCGAGTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACACCATGGGGTGTATGGTGTGGCCATaGAGACAATGTAGTGGACGC +
Preference number: 4 (lower is better)
Translates to: PSPTRGPTLVTLVWDTMGCMVWP*RQCSGR
Trigger: GCGTCCACTACATTGTCTTCATGGCCACACCATACA...CCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTTGCCAGAGCGTCCCTaGGACCTCGGTGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWLPERP*DLGVWC
Trigger: ACACCATACACCGAGGTCTCAGGGACGCTCTGGCAA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGGGCCGACATTGGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTTTGCCAGAGCGTCCCTaGGACCTCGGTGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: GADIGHTCVGHHGAVAIALPERP*DLGVWC
Trigger: ACACCATACACCGAGGTCTCAGGGACGCTCTGGCAA...AGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp GGGACACCATGGGGCCGTAGCTATAGCTGCTGCTCCCGCTGCGTGCCTTTCGCTGGCTCCAAGATTTCTTaGTCTCAGCTTGTACCTCGC +
Preference number: 4 (lower is better)
Translates to: GTPWGRSYSCCSRCVPFAGSKIS*SQLVPR
Trigger: GCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCC...AGCGAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCCCCATGGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTGCGTGCCTTTCGCTTaGAGTCCAGTGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWCVPFA*SPVPVS
Trigger: GGACACTGGCACTGGACTTCAAGCGAAAGGCACGCA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTGCGTGCCTTTCGCTTaGAGTCCAGTGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLCVPFA*SPVPVS
Trigger: GGACACTGGCACTGGACTTCAAGCGAAAGGCACGCA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGCATGGCCAGGCAGCTaGGGGTGGCCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSAWPGS*GWPLVV
Trigger: CACCACCAACGGCCACCCTCAGCTGCCTGGCCATGC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCAGCGCCTGGTCACATaGCTGTCTCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWQRLVT*LSPTLP
Trigger: AGGAAGAGTGGGAGACAGTCATGTGACCAGGCGCTG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCAGCGCCTGGTCACATaGCTGTCTCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLQRLVT*LSPTLP
Trigger: AGGAAGAGTGGGAGACAGTCATGTGACCAGGCGCTG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGGGCCGACATTGGTCACACTTGTGTGGGACACCATGGGGCCGTAGCTATAGCTCAGCGCCTGGTCACATaGCTGTCTCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GADIGHTCVGHHGAVAIAQRLVT*LSPTLP
Trigger: AGGAAGAGTGGGAGACAGTCATGTGACCAGGCGCTG...AGCTATAGCTACGGCCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCCATGGATAGTCCCTaGGCAGCTTCTGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLAMDSP*AASVAQ
Trigger: CTGAGCCACAGAAGCTGCTCAGGGACTATCCATGGC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS-3UTR GCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGGTGGTGGTAGGGGGTaGAGAGCTGCGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICGGGRG*RAASGW
Trigger: CCAGCCTGACGCAGCTCTGCACCCCCTACCACCACC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313049.9
ENST00000428220.1
CDS-3UTR GCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTATGCTGGCTGGCCTCTaGAGGACCTCCTTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPMLAGL*RTSLSR
Trigger: ACGGCTCAAGGAGGTCCTGCAGAGGCCAGCCAGCAT...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp ATCTGGACTTGCCAGAGCGTCCCTGAGACCTCGGTGTATGGTGTGGCCATGAAGATGCTGGCTGGCCTCTaGAGGACCTCCTTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: IWTCQSVPETSVYGVAMKMLAGL*RTSLSR
Trigger: ACGGCTCAAGGAGGTCCTGCAGAGGCCAGCCAGCAT...CTTCATGGCCACACCATACACCGAGGTCTCAGGGACGCTCTGGCAAGTCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCCTGCTGCCAGTGGGTaGCTCCTTGTCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPPAASG*LLVLLR
Trigger: TCTGAGGAGGACAAGGAGGCACCCACTGGCAGCAGG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGGCGCCCTCGGTACCTaGTGCCAGTGGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSGALGT*CQWVPP
Trigger: AGGAGGCACCCACTGGCAGCAGGTACCGAGGGCGCC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGCCCACGTCCTGTTGTaGCCAGGCACCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIAHVLL*PGTSSQ
Trigger: CTGGGAGCTGGTGCCTGGGCACAACAGGACGTGGGC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCGTAGCTATAGCTGCTaGTCCCGCTGCGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWRSYSC*SRCVPF
Trigger: GAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTACCTGCTGCCAGTaGGTGCCTCCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPGTCCQ*VPPCPP
Trigger: AGGAGGACAAGGAGGCACCCACTGGCAGCAGGTACC...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCCAGCACAGGATGTaGTCCCATTCCGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPGQHRM*SHSGRQ
Trigger: CTGTCTGCCGGAATGGGACCACATCCTGTGCTGGCC...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCACACTCGCTGTAGTTaGCCCACGTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLHTRCS*PTSCCA
Trigger: GGCACAACAGGACGTGGGCCAACTACAGCGAGTGTG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCAGCCTCATCAAGCGTaGCGCCAGAGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLQPHQA*RQSRAQ
Trigger: CTGTGCTCTACTCTGGCGCCACGCTTGATGAGGCTG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTCTCCCGCAGCTTGGTaGCGAGCACCCGGACGATAT +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPSPAAW*RAPGRY
Trigger: ATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTGGTCTCCCGCAGCTTaGTGGCGAGCACCCGGACGA +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICWSPAA*WRAPGR
Trigger: TCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCACACCGGCCGGCGTTaGTCTCCCGCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSHTGRR*SPAAWW
Trigger: CCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCACGGGGGCCGACATTaGTCACACTTGTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLHGGRH*SHLCGT
Trigger: TGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCTGGGGTCCCTGGCTTaGCATGGCCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICLGSLA*HGQAAE
Trigger: CTCAGCTGCCTGGCCATGCCAAGCCAGGGACCCCAG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCTGGGGTCCCTGGCTTaGCATGGCCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILGSLA*HGQAAE
Trigger: CTCAGCTGCCTGGCCATGCCAAGCCAGGGACCCCAG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTAGCAGCCATGGCAGGTaGTGTGGTCTCGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPSSHGR*CGLEGL
Trigger: GAGACCCTCGAGACCACACCACCTGCCATGGCTGCT...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCCTTGGGAGCAGCCATaGCAGGTGGTGTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPPWEQP*QVVWSR
Trigger: TCGAGACCACACCACCTGCCATGGCTGCTCCCAAGG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGAACCCATCGTCCTTaGGAGCAGCCATGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPGTHRP*EQPWQV
Trigger: CACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCC...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGGCCCCAGCCCTGAGTaGGAAATCATTCAACCACCC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWGPSPE*EIIQPP
Trigger: GGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCCCCAGCCCTGAGTaGGAAATCATTCAACCACCC +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLGPSPE*EIIQPP
Trigger: GGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTCTGCAGGACCTCCTTaGGCCGTTTTTCGCACTGGG +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPSAGPP*AVFRTG
Trigger: CCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTTTCCTGGGCTTCCCTaGTGTGGACGCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLFPGLP*CGRRCP
Trigger: TGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GCAGCTTCCGGTACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCACATGGCCTTTGTGATTaGAGTCATAAATGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: AASGTAAVCHTGRRWSPAHGLCD*SHKCSP
Trigger: CGGACTACATTTATGACTTCAATCACAAAGGCCATG...TGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTACCGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGCAGCTCCTCCTCGGTaGGGCGCTCAGCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIAAPPR*GAQPHQ
Trigger: TTGATGAGGCTGAGCGCCTCACCGAGGAGGAGCTGC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGCAGCTCCTCCTCGGTaGGGCGCTCAGCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICAAPPR*GAQPHQ
Trigger: TTGATGAGGCTGAGCGCCTCACCGAGGAGGAGCTGC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCCCAGCCGAAGACTGTaGAGCCCCACAGGTACTTCT +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPPSRRL*SPTGTS
Trigger: AGAAGTACCTGTGGGGCTTCACAGTCTTCGGCTGGG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGGATGGGCACCTGGATaGTCCACTTTTTGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWGWAPG*STFCSR
Trigger: CCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGATGGGCACCTGGATaGTCCACTTTTTGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLGWAPG*STFCSR
Trigger: CCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTTGCCAGAGCGTCCCTaGGACCTCGGTGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPLPERP*DLGVWC
Trigger: ACACCATACACCGAGGTCTCAGGGACGCTCTGGCAA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCAGCGCCTGGTCACATaGCTGTCTCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPQRLVT*LSPTLP
Trigger: AGGAAGAGTGGGAGACAGTCATGTGACCAGGCGCTG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGAGTCATGACGTCATCTaGATCCACCAGCGCGTACGC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSHDVI*IHQRVR
Trigger: GCGTACGCGCTGGTGGATGCAGATGACGTCATGACT...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGCTCCCAGCTGCCATTaGGGTCACAGCGTCGGTAGG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIAPSCH*GHSVGR
Trigger: CCTACCGACGCTGTGACCGCAATGGCAGCTGGGAGC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGCTCCCAGCTGCCATTaGGGTCACAGCGTCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICAPSCH*GHSVGR
Trigger: CCTACCGACGCTGTGACCGCAATGGCAGCTGGGAGC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCAGCTTCCGGTACTGCTaGCGTGTGTCACACCGGCCG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISFRYC*RVSHRP
Trigger: CGGCCGGTGTGACACACGGCAGCAGTACCGGAAGCT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGGCCGTAGCTATAGCTaGTGCTCCCGCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIGRSYS*CSRCVP
Trigger: AGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCACACTCGCTGTAGTTaGCCCACGTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPHTRCS*PTSCCA
Trigger: GGCACAACAGGACGTGGGCCAACTACAGCGAGTGTG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCAGCCTCATCAAGCGTaGCGCCAGAGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPQPHQA*RQSRAQ
Trigger: CTGTGCTCTACTCTGGCGCCACGCTTGATGAGGCTG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTGGTCTCCCGCAGCTTaGTGGCGAGCACCCGGACGA +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSWSPAA*WRAPGR
Trigger: TCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCA...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTTGTGTGGGACACCATaGGGCCGTAGCTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLLCGTP*GRSYSC
Trigger: GCAGCTATAGCTACGGCCCCATGGTGTCCCACACAA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCACGGGGGCCGACATTaGTCACACTTGTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPHGGRH*SHLCGT
Trigger: TGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCCAGCCCCCAGCGCCTaGTCACATGACTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIPAPSA*SHDCLP
Trigger: TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCCAGCCCCCAGCGCCTaGTCACATGACTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICPAPSA*SHDCLP
Trigger: TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCCCCAGCCCTGAGTaGGAAATCATTCAACCACCC +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPGPSPE*EIIQPP
Trigger: GGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTTTTCGCACTGGGCCTaGGCACGGTGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICFSHWA*ARCSRK
Trigger: CTTCCTGCTGCACCGTGCTCAGGCCCAGTGCGAAAA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTTTCGCACTGGGCCTaGGCACGGTGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIFSHWA*ARCSRK
Trigger: CTTCCTGCTGCACCGTGCTCAGGCCCAGTGCGAAAA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTTTCCTGGGCTTCCCTaGTGTGGACGCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPFPGLP*CGRRCP
Trigger: TGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCAGAGCACAGCGTCCTTaGCGAAGATGCTCACGGCGC +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIRAQRP*RRCSRR
Trigger: GCGCCGTGAGCATCTTCGTCAAGGACGCTGTGCTCT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTAGAGCACAGCGTCCTTaGCGAAGATGCTCACGGCGC +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICRAQRP*RRCSRR
Trigger: GCGCCGTGAGCATCTTCGTCAAGGACGCTGTGCTCT...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCTGAGCAGGAGCCGTTaGGGAACCCATCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILSRSR*GTHRPW
Trigger: CCAAGGACGATGGGTTCCTCAACGGCTCCTGCTCAG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCCTGCTGCCAGTGGGTaGCTCCTTGTCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICPAASG*LLVLLR
Trigger: TCTGAGGAGGACAAGGAGGCACCCACTGGCAGCAGG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGCCCTCGGTACCTGCTaGCAGTGGGTGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSALGTC*QWVPPC
Trigger: ACAAGGAGGCACCCACTGGCAGCAGGTACCGAGGGC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGCTCCCAGCTGCCATTaGGGTCACAGCGTCGGTAGG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSAPSCH*GHSVGR
Trigger: CCTACCGACGCTGTGACCGCAATGGCAGCTGGGAGC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGCACCAGCTCCCAGCTaGCATTGCGGTCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSAPAPS*HCGHSV
Trigger: GACGCTGTGACCGCAATGGCAGCTGGGAGCTGGTGC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCAGCAGCTTCCGGTACTaGTGCCGTGTGTCACACCGG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISSFRY*CRVSHR
Trigger: CCGGTGTGACACACGGCAGCAGTACCGGAAGCTGCT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGCTGCTCCCGCTGCGTaGCTTTCGCTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICAAPAA*LSLEVQ
Trigger: CTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGGCCGTAGCTATAGCTaGTGCTCCCGCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSGRSYS*CSRCVP
Trigger: AGGCACGCAGCGGGAGCAGCAGCTATAGCTACGGCC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCTCAGTTTCCTCATCTaGAGCCCATGGGCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWLSFLI*SPWAFQ
Trigger: TTGGAAGGCCCATGGGCTGCAGATGAGGAAACTGAG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTTCCATTATGCTGGCTaGCCTCTGCAGGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLFHYAG*PLQDLL
Trigger: AAGGAGGTCCTGCAGAGGCCAGCCAGCATAATGGAA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTTCCATTATGCTGGCTaGCCTCTGCAGGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWFHYAG*PLQDLL
Trigger: AAGGAGGTCCTGCAGAGGCCAGCCAGCATAATGGAA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGGTACCTGCTGCCAGTaGGTGCCTCCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICGTCCQ*VPPCPP
Trigger: AGGAGGACAAGGAGGCACCCACTGGCAGCAGGTACC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGGCCAGCACAGGATGTaGTCCCATTCCGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICGQHRM*SHSGRQ
Trigger: CTGTCTGCCGGAATGGGACCACATCCTGTGCTGGCC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCTCCCGCAGCTTGGTaGCGAGCACCCGGACGATAT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISPAAW*RAPGRY
Trigger: ATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTTGTGTGGGACACCATaGGGCCGTAGCTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPLCGTP*GRSYSC
Trigger: GCAGCTATAGCTACGGCCCCATGGTGTCCCACACAA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCAGCAGCCATGGCAGGTaGTGTGGTCTCGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISSHGR*CGLEGL
Trigger: GAGACCCTCGAGACCACACCACCTGCCATGGCTGCT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCTCATCTGCAGCCCATaGGCCTTCCAAGTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILICSP*AFQVGP
Trigger: AGGCCCGACTTGGAAGGCCCATGGGCTGCAGATGAG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTTTTCGCACTGGGCCTaGGCACGGTGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSFSHWA*ARCSRK
Trigger: CTTCCTGCTGCACCGTGCTCAGGCCCAGTGCGAAAA...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCTGCAGGACCTCCTTaGGCCGTTTTTCGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISAGPP*AVFRTG
Trigger: CCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTCTGCAGGACCTCCTTaGGCCGTTTTTCGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICSAGPP*AVFRTG
Trigger: CCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTCACGGCGCGCAGCATaGAGGACAGGAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSSRRAA*RTGTGA
Trigger: TGCACCTGTTCCTGTCCTTCATGCTGCGCGCCGTGA...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCCCAGCCGAAGACTGTaGAGCCCCACAGGTACTTCT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIPSRRL*SPTGTS
Trigger: AGAAGTACCTGTGGGGCTTCACAGTCTTCGGCTGGG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGCACCAGCGTGGATTTaGGCAGCTTCCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICAPAWI*AASGTA
Trigger: AGCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGCACCAGCGTGGATTTaGGCAGCTTCCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIAPAWI*AASGTA
Trigger: AGCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTGTATGGTGTGGCCATaGAGACAATGTAGTGGACGC +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLCMVWP*RQCSGR
Trigger: GCGTCCACTACATTGTCTTCATGGCCACACCATACA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTGCCAGAGCGTCCCTaGGACCTCGGTGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILPERP*DLGVWC
Trigger: ACACCATACACCGAGGTCTCAGGGACGCTCTGGCAA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGGCTCCAAGATTTCTTaGTCTCAGCTTGTACCTCGC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWGSKIS*SQLVPR
Trigger: GCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTGCGTGCCTTTCGCTTaGAGTCCAGTGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICCVPFA*SPVPVS
Trigger: GGACACTGGCACTGGACTTCAAGCGAAAGGCACGCA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGCGTGCCTTTCGCTTaGAGTCCAGTGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSICVPFA*SPVPVS
Trigger: GGACACTGGCACTGGACTTCAAGCGAAAGGCACGCA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCTGAGCAGGAGCCGTTaGGGAACCCATCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSLSRSR*GTHRPW
Trigger: CCAAGGACGATGGGTTCCTCAACGGCTCCTGCTCAG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCAGCGCCTGGTCACATaGCTGTCTCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIQRLVT*LSPTLP
Trigger: AGGAAGAGTGGGAGACAGTCATGTGACCAGGCGCTG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCAGCGCCTGGTCACATaGCTGTCTCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICQRLVT*LSPTLP
Trigger: AGGAAGAGTGGGAGACAGTCATGTGACCAGGCGCTG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTATGCTGGCTGGCCTCTaGAGGACCTCCTTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSMLAGL*RTSLSR
Trigger: ACGGCTCAAGGAGGTCCTGCAGAGGCCAGCCAGCAT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTAGCAGCTTCCGGTACTaGTGCCGTGTGTCACACCGG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSSSFRY*CRVSHR
Trigger: CCGGTGTGACACACGGCAGCAGTACCGGAAGCTGCT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGCTGCTCCCGCTGCGTaGCTTTCGCTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSAAPAA*LSLEVQ
Trigger: CTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCGTAGCTATAGCTGCTaGTCCCGCTGCGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIRSYSC*SRCVPF
Trigger: GAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGATGCCTTATCTTTCCTaGGCTTCCCTGATGTGGACG +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWMPYLS*ASLMWT
Trigger: CGTCCACATCAGGGAAGCCCAGGAAAGATAAGGCAT...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCACACTCGCTGTAGTTaGCCCACGTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIHTRCS*PTSCCA
Trigger: GGCACAACAGGACGTGGGCCAACTACAGCGAGTGTG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCAGCCTCATCAAGCGTaGCGCCAGAGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIQPHQA*RQSRAQ
Trigger: CTGTGCTCTACTCTGGCGCCACGCTTGATGAGGCTG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCCAGGATGGGCACCTaGATGATCCACTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWARMGT*MIHFLF
Trigger: GAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCACGGGGGCCGACATTaGTCACACTTGTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICHGGRH*SHLCGT
Trigger: TGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTAGCAGCCATGGCAGGTaGTGTGGTCTCGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSSSHGR*CGLEGL
Trigger: GAGACCCTCGAGACCACACCACCTGCCATGGCTGCT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCCTTGGGAGCAGCCATaGCAGGTGGTGTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSPWEQP*QVVWSR
Trigger: TCGAGACCACACCACCTGCCATGGCTGCTCCCAAGG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGGAACCCATCGTCCTTaGGAGCAGCCATGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSGTHRP*EQPWQV
Trigger: CACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGGCCCCAGCCCTGAGTaGGAAATCATTCAACCACCC +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICGPSPE*EIIQPP
Trigger: GGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCACTCTTCGGCTGTCTaGACCTCAGTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLHSSAV*TSVSSS
Trigger: AGATGAGGAAACTGAGGTCCAGACAGCCGAAGAGTG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418619.5
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTTCCTGGGCTTCCCTaGTGTGGACGCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIFPGLP*CGRRCP
Trigger: TGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCCCAGCCGAAGACTGTaGAGCCCCACAGGTACTTCT +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSPSRRL*SPTGTS
Trigger: AGAAGTACCTGTGGGGCTTCACAGTCTTCGGCTGGG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGGATGGGCACCTGGATaGTCCACTTTTTGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICGWAPG*STFCSR
Trigger: CCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCTCCAAGATTTCTTaGTCTCAGCTTGTACCTCGC +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPGSKIS*SQLVPR
Trigger: GCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCC...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTGCGTGCCTTTCGCTTaGAGTCCAGTGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSCVPFA*SPVPVS
Trigger: GGACACTGGCACTGGACTTCAAGCGAAAGGCACGCA...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTAGTCATGACGTCATCTaGATCCACCAGCGCGTACGC +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICSHDVI*IHQRVR
Trigger: GCGTACGCGCTGGTGGATGCAGATGACGTCATGACT...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCAGTCATGACGTCATCTaGATCCACCAGCGCGTACGC +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISHDVI*IHQRVR
Trigger: GCGTACGCGCTGGTGGATGCAGATGACGTCATGACT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGTAGAGCTTCCCAGATaGCTTATCTTTCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWVELPR*LIFPGL
Trigger: AAGCCCAGGAAAGATAAGGCATCTGGGAAGCTCTAC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTAGAGCTTCCCAGATaGCTTATCTTTCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLVELPR*LIFPGL
Trigger: AAGCCCAGGAAAGATAAGGCATCTGGGAAGCTCTAC...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CAGCGGCTCCAAGATTTCTTGATCTCAGCTTGTACCTCGCCATTGCAGAAACAGCCTGCTGCCAGTGGGTaGCTCCTTGTCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: QRLQDFLISACTSPLQKQPAASG*LLVLLR
Trigger: TCTGAGGAGGACAAGGAGGCACCCACTGGCAGCAGG...CTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCGTAGCTATAGCTGCTaGTCCCGCTGCGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSRSYSC*SRCVPF
Trigger: GAAAGGCACGCAGCGGGAGCAGCAGCTATAGCTACG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTGGGCTTCCCTGATGTaGACGCAGATGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICWASLM*TQMSIP
Trigger: AGGGATGGACATCTGCGTCCACATCAGGGAAGCCCA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGGGCTTCCCTGATGTaGACGCAGATGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIWASLM*TQMSIP
Trigger: AGGGATGGACATCTGCGTCCACATCAGGGAAGCCCA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTATGCCTTATCTTTCCTaGGCTTCCCTGATGTGGACG +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPMPYLS*ASLMWT
Trigger: CGTCCACATCAGGGAAGCCCAGGAAAGATAAGGCAT...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCACACTCGCTGTAGTTaGCCCACGTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSHTRCS*PTSCCA
Trigger: GGCACAACAGGACGTGGGCCAACTACAGCGAGTGTG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCAGCCTCATCAAGCGTaGCGCCAGAGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSQPHQA*RQSRAQ
Trigger: CTGTGCTCTACTCTGGCGCCACGCTTGATGAGGCTG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTGTGTGGGACACCATaGGGCCGTAGCTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILCGTP*GRSYSC
Trigger: GCAGCTATAGCTACGGCCCCATGGTGTCCCACACAA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTTGTGTGGGACACCATaGGGCCGTAGCTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICLCGTP*GRSYSC
Trigger: GCAGCTATAGCTACGGCCCCATGGTGTCCCACACAA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCACGGGGGCCGACATTaGTCACACTTGTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSHGGRH*SHLCGT
Trigger: TGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGGCCCCAGCCCTGAGTaGGAAATCATTCAACCACCC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSGPSPE*EIIQPP
Trigger: GGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCCTGAGCAGCTTCTGTaGCTCAGGCCTAAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICPEQLL*LRPKQG
Trigger: TCCTTGCTTAGGCCTGAGCCACAGAAGCTGCTCAGG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTAGAGCAGACTCAAGTTaGCCACGGGGAGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSRADSS*PRGGHG
Trigger: TCCATGGCCTCCCCGTGGCCAACTTGAGTCTGCTCT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTTTCCTGGGCTTCCCTaGTGTGGACGCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSFPGLP*CGRRCP
Trigger: TGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAA...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGGATGGGCACCTGGATaGTCCACTTTTTGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSGWAPG*STFCSR
Trigger: CCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTATCCCTGGAAGGAGTTaGAGAGCATCTCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPIPGRS*RASHSA
Trigger: TGCACTATGAGATGCTCTTCAACTCCTTCCAGGGAT...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCCACGGTGTAAATCATaGCCAGGCGGTCAAACACCT +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICPRCKS*PGGQTP
Trigger: AGGTGTTTGACCGCCTGGGCATGATTTACACCGTGG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCATGGCCTTTGTGATTaGAGTCATAAATGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLHGLCD*SHKCSP
Trigger: CGGACTACATTTATGACTTCAATCACAAAGGCCATG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTGTATGGTGTGGCCATaGAGACAATGTAGTGGACGC +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICCMVWP*RQCSGR
Trigger: GCGTCCACTACATTGTCTTCATGGCCACACCATACA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCCACGGTGTAAATCATaGCCAGGCGGTCAAACACCT +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSPRCKS*PGGQTP
Trigger: AGGTGTTTGACCGCCTGGGCATGATTTACACCGTGG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCCTCATCTTTGTCCTTaGTGCTTCCTCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICPHLCP*CFLCQD
Trigger: ATCCTGGCAGAGGAAGCAGCAAGGACAAAGATGAGG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418619.5
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCATGCCTTATCTTTCCTaGGCTTCCCTGATGTGGACG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIMPYLS*ASLMWT
Trigger: CGTCCACATCAGGGAAGCCCAGGAAAGATAAGGCAT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGCCAGGATGGGCACCTaGATGATCCACTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIARMGT*MIHFLF
Trigger: GAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGATCTCAGCTTGTACCTCGCCATTGCAGAAACAGTATATGATTGCGACAAAACACACCGGCCGGCGTTaGTCTCCCGCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LISACTSPLQKQYMIATKHTGRR*SPAAWW
Trigger: CCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTG...TTTTGTCGCAATCATATACTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp CAGCGGCTCCAAGATTTCTTGATCTCAGCTTGTACCTCGCCATTGCAGAAACAGTTGTGTGGGACACCATaGGGCCGTAGCTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRLQDFLISACTSPLQKQLCGTP*GRSYSC
Trigger: GCAGCTATAGCTACGGCCCCATGGTGTCCCACACAA...CTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTGTACCTGCATCATCTaGAAAGACTTCTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWCTCII*KDFSAF
Trigger: GAAAGCAGAGAAGTCTTTCCAGATGATGCAGGTACA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422115.2
CDS-3UTR TCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCATCCCTGGAAGGAGTTaGAGAGCATCTCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIIPGRS*RASHSA
Trigger: TGCACTATGAGATGCTCTTCAACTCCTTCCAGGGAT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGGCTCCAAGATTTCTTaGTCTCAGCTTGTACCTCGC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSGSKIS*SQLVPR
Trigger: GCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp GCCTTTCGCTTGAAGTCCAGTGCCAGTGTCCAGCGGCTCCAAGATTTCTTGATCGTAGAGCTTCCCAGATaGCTTATCTTTCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AFRLKSSASVQRLQDFLIVELPR*LIFPGL
Trigger: AAGCCCAGGAAAGATAAGGCATCTGGGAAGCTCTAC...GATCAAGAAATCTTGGAGCCGCTGGACACTGGCACTGGACTTCAAGCGAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCATCTTTGTCCTTGCTaGTTCCTCTGCCAGGATCAT +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIHLCPC*FLCQDH
Trigger: ATGATCCTGGCAGAGGAAGCAGCAAGGACAAAGATG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418619.5
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGCCAGGATGGGCACCTaGATGATCCACTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSARMGT*MIHFLF
Trigger: GAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGC...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CCA 90 bp TTGATCTCAGCTTGTACCTCGCCATTGCAGAAACAGTATATGATTGCGACAAAATGGTCTCCCGCAGCTTaGTGGCGAGCACCCGGACGA +
Preference number: 4 (lower is better)
Translates to: LISACTSPLQKQYMIATKWSPAA*WRAPGR
Trigger: TCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCA...TTTTGTCGCAATCATATACTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCACTCTTCGGCTGTCTaGACCTCAGTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSHSSAV*TSVSSS
Trigger: AGATGAGGAAACTGAGGTCCAGACAGCCGAAGAGTG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418619.5
ENST00000449590.6
3UTR CAA 72 bp AAGTCCAGTGCCAGTGTCCAGCGGCTCCAAGATTTCTaGATCTCAGCTTGTACCTCGCCATTGCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: KSSASVQRLQDF*ISACTSPLQKQ
Trigger: CTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTGGACACTGGCACTGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTATCCCTGGAAGGAGTTaGAGAGCATCTCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSIPGRS*RASHSA
Trigger: TGCACTATGAGATGCTCTTCAACTCCTTCCAGGGAT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCTGGAAAGACTTCTCTaGTTTCAGAATGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILERLL*FQNVLR
Trigger: CCTGAGGACATTCTGAAAGCAGAGAAGTCTTTCCAG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422115.2
CDS-3UTR TCA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCATGGCCTTTGTGATTaGAGTCATAAATGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICHGLCD*SHKCSP
Trigger: CGGACTACATTTATGACTTCAATCACAAAGGCCATG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR TCA 90 bp CAGCGGCTCCAAGATTTCTTGATCTCAGCTTGTACCTCGCCATTGCAGAAACAGATCCCTGGAAGGAGTTaGAGAGCATCTCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: QRLQDFLISACTSPLQKQIPGRS*RASHSA
Trigger: TGCACTATGAGATGCTCTTCAACTCCTTCCAGGGAT...CTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR TCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCATGGCCTTTGTGATTaGAGTCATAAATGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSHGLCD*SHKCSP
Trigger: CGGACTACATTTATGACTTCAATCACAAAGGCCATG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR GCA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTATCTCAGCTTGTACCTaGATCATCTGGAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSISACT*IIWKDF
Trigger: GAAGTCTTTCCAGATGATGCAGGTACAAGCTGAGAT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422115.2
CDS TCA 90 bp CAGGCGGCGGGGGCGCCTGGGCGATGGCGCGCAGCTCCTCCTCGGTaGGGCGCTCAGCCTCATCAAGCGTGGCGCCAGAGTAGAGCACAG +
Preference number: 5 (lower is better)
Translates to: QAAGAPGRWRAAPPR*GAQPHQAWRQSRAQ
Trigger: CTGTGCTCTACTCTGGCGCCACGCTTGATGAGGCTGAGCGCCTCACCGAGGAGGAGCTGCGCGCCATCGCCCAGGCGCCCCCGCCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TACTGCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGTTGGTCTCCCGCAGCTaGGTGGCGAGCACCCGGACG +
Preference number: 5 (lower is better)
Translates to: YCCRVSHRPALVSRSLVALVSRS*VASTRT
Trigger: CGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAA...CGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGCAGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp CCGAGTCCCACACGGGGGCCGACATTGGTCACACTTGTGTGGGACACCATGGGGTTGGCCCACGTCCTGTaGTGCCCAGGCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSPTRGPTLVTLVWDTMGLAHVL*CPGTSS
Trigger: GGAGCTGGTGCCTGGGCACAACAGGACGTGGGCCAA...CCCCATGGTGTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGTGGGACTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp GCTGCCGTGTGTCACACCGGCCGGCGTTGGTCTCCCGCAGCTTGGTGGCGAGCAAGCACCAGCGTGGATTaGAGCAGCTTCCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: AAVCHTGRRWSPAAWWRASTSVD*SSFRYC
Trigger: GCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGCT...TGCTCGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACACGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTTGGTCTCCCGCAGCTaGGTGGCGAGCACCCGGACG +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWLVSRS*VASTRT
Trigger: CGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTCACACCGGCCGGCGTaGGTCTCCCGCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLSHRPA*VSRSLV
Trigger: CACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCACACCGGCCGGCGTaGGTCTCCCGCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSHRPA*VSRSLV
Trigger: CACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCCGCCGCCGGCCCAGTaGTGTGTCCTGGACACTACC +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLPPPAQ*CVLDTT
Trigger: GGTAGTGTCCAGGACACACAACTGGGCCGGCGGCGG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418619.5
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTTGGCCCACGTCCTGTaGTGCCCAGGCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWLAHVL*CPGTSS
Trigger: GGAGCTGGTGCCTGGGCACAACAGGACGTGGGCCAA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTTGGTCTCCCGCAGCTaGGTGGCGAGCACCCGGACG +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPLVSRS*VASTRT
Trigger: CGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTCACACCGGCCGGCGTaGGTCTCCCGCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPSHRPA*VSRSLV
Trigger: CACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCCGCCGCCGGCCCAGTaGTGTGTCCTGGACACTACC +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPPPPAQ*CVLDTT
Trigger: GGTAGTGTCCAGGACACACAACTGGGCCGGCGGCGG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418619.5
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCCCAGCACCCGGTGTaGGCCAGGGTAGCTCTGACA +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSQHPV*ARVALT
Trigger: TGTCAGAGCTACCCTGGCCAACACCGGGTGCTGGGA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTCCCAGCACCCGGTGTaGGCCAGGGTAGCTCTGACA +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLSQHPV*ARVALT
Trigger: TGTCAGAGCTACCCTGGCCAACACCGGGTGCTGGGA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp AGGGGCATGAGCACCAGCGTGGATTTGAGCAGCTTCCGGTACTGCTGCCGTGTGTCCCTGTTTTTCCTCTaGGCCCCAGCCCTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RGMSTSVDLSSFRYCCRVSLFFL*APALSG
Trigger: CCCACTCAGGGCTGGGGCCAAGAGGAAAAACAGGGA...CACACGGCAGCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGCTCATGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTCCCAGCACCCGGTGTaGGCCAGGGTAGCTCTGACA +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPSQHPV*ARVALT
Trigger: TGTCAGAGCTACCCTGGCCAACACCGGGTGCTGGGA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTGGTCTCCCGCAGCTaGGTGGCGAGCACCCGGACG +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILVSRS*VASTRT
Trigger: CGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTTGGTCTCCCGCAGCTaGGTGGCGAGCACCCGGACG +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICLVSRS*VASTRT
Trigger: CGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTCACACCGGCCGGCGTaGGTCTCCCGCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICSHRPA*VSRSLV
Trigger: CACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCACACCGGCCGGCGTaGGTCTCCCGCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISHRPA*VSRSLV
Trigger: CACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCACATGACTGTCTCCCACTGCGTGCCTTTCGCTaGAAGTCCAGTGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: STMSAGPAPSAWSHDCLPLRAFR*KSSASV
Trigger: GACACTGGCACTGGACTTCAAGCGAAAGGCACGCAG...TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGACACGGGGGCCGACATaGGTCACACTTGTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLTRGPT*VTLVWD
Trigger: GTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGT...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGAGGAACCCATCGTCCTaGGGAGCAGCCATGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLRNPSS*GAAMAG
Trigger: ACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCCT...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCCCTGTTTTTCCTCTaGGCCCCAGCCCTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWSLFFL*APALSG
Trigger: CCCACTCAGGGCTGGGGCCAAGAGGAAAAACAGGGA...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000449590.6
CDS CCA 90 bp GGCCTAAAGCTGCAGAGCAGACTCAAGTTGGCCACGGGGAGGCCATaGATAGTCCCTGAGCAGCTTCTGTGGCTCAGGCCTAAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: GLKLQSRLKLATGRP*IVPEQLLWLRPKQG
Trigger: TCCTTGCTTAGGCCTGAGCCACAGAAGCTGCTCAGGGACTATCCATGGCCTCCCCGTGGCCAACTTGAGTCTGCTCTGCAGCTTTAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCTCTGCAGGACCTCCTaGAGCCGTTTTTCGCACTGG +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLLCRTS*SRFSHW
Trigger: CCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGAG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCTCTGCAGGACCTCCTaGAGCCGTTTTTCGCACTGG +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWLCRTS*SRFSHW
Trigger: CCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGAG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGAGCACCAGCGTGGATTaGAGCAGCTTCCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLSTSVD*SSFRYC
Trigger: GCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGCT...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCTGCGTGCCTTTCGCTaGAAGTCCAGTGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLLRAFR*KSSASV
Trigger: GACACTGGCACTGGACTTCAAGCGAAAGGCACGCAG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCTGCGTGCCTTTCGCTaGAAGTCCAGTGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWLRAFR*KSSASV
Trigger: GACACTGGCACTGGACTTCAAGCGAAAGGCACGCAG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCGACATTGGTCACACTaGTGTGGGACACCATGGGGC +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWRHWSH*CGTPWG
Trigger: GCCCCATGGTGTCCCACACAAGTGTGACCAATGTCG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGCGACATTGGTCACACTaGTGTGGGACACCATGGGGC +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLRHWSH*CGTPWG
Trigger: GCCCCATGGTGTCCCACACAAGTGTGACCAATGTCG...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTACACGGGGGCCGACATaGGTCACACTTGTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPTRGPT*VTLVWD
Trigger: GTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGT...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTAGGAACCCATCGTCCTaGGGAGCAGCCATGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPRNPSS*GAAMAG
Trigger: ACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCCT...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTCCCTGTTTTTCCTCTaGGCCCCAGCCCTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPSLFFL*APALSG
Trigger: CCCACTCAGGGCTGGGGCCAAGAGGAAAAACAGGGA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000449590.6
CDS TCA 90 bp GCTGGCCTCTGCAGGACCTCCTTGAGCCGTTTTTCGCACTGGGCCTaGGCACGGTGCAGCAGGAAGATCTGTTCCTCTTTAGTCATGACG +
Preference number: 5 (lower is better)
Translates to: AGLCRTSLSRFSHWA*ARCSRKICSSLVMT
Trigger: CGTCATGACTAAAGAGGAACAGATCTTCCTGCTGCACCGTGCTCAGGCCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGAGGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS TCA 90 bp CCTTGTCTGATTCCATTATGCTGGCTGGCCTCTGCAGGACCTCCTTaGGCCGTTTTTCGCACTGGGCCTGAGCACGGTGCAGCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PCLIPLCWLASAGPP*AVFRTGPEHGAAGR
Trigger: TCTTCCTGCTGCACCGTGCTCAGGCCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGAGGCCAGCCAGCATAATGGAATCAGACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS GCA 90 bp TGGACACTACCACTCTTCGGCTGTCTGGACCTCAGTTTCCTCATCTaGAGCCCATGGGCCTTCCAAGTCGGGCCTAAAGCTGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: WTLPLFGCLDLSFLI*SPWAFQVGPKAAEQ
Trigger: CTGCTCTGCAGCTTTAGGCCCGACTTGGAAGGCCCATGGGCTGCAGATGAGGAAACTGAGGTCCAGACAGCCGAAGAGTGGTAGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS-3UTR CAA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTTGGCCCACGTCCTGTaGTGCCCAGGCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSLAHVL*CPGTSS
Trigger: GGAGCTGGTGCCTGGGCACAACAGGACGTGGGCCAA...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTCCCAGCACCCGGTGTaGGCCAGGGTAGCTCTGACA +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICSQHPV*ARVALT
Trigger: TGTCAGAGCTACCCTGGCCAACACCGGGTGCTGGGA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCACATGACTGTCTCCCATGGATGATCCACTTTTaGTTCCCGGAGCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: STMSAGPAPSAWSHDCLPWMIHF*FPELKS
Trigger: GGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCA...TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTACACGGGGGCCGACATaGGTCACACTTGTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICTRGPT*VTLVWD
Trigger: GTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGT...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCACACGGGGGCCGACATaGGTCACACTTGTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSITRGPT*VTLVWD
Trigger: GTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTAGGAACCCATCGTCCTaGGGAGCAGCCATGGCAGGT +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICRNPSS*GAAMAG
Trigger: ACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCCT...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCAGGAACCCATCGTCCTaGGGAGCAGCCATGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIRNPSS*GAAMAG
Trigger: ACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCCT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCCTGAGCAGGAGCCGTaGAGGAACCCATCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIPEQEP*RNPSSL
Trigger: CAAGGACGATGGGTTCCTCAACGGCTCCTGCTCAGG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCCTGAGCAGGAGCCGTaGAGGAACCCATCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICPEQEP*RNPSSL
Trigger: CAAGGACGATGGGTTCCTCAACGGCTCCTGCTCAGG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTCCCTGTTTTTCCTCTaGGCCCCAGCCCTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICSLFFL*APALSG
Trigger: CCCACTCAGGGCTGGGGCCAAGAGGAAAAACAGGGA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCTCTGCAGGACCTCCTaGAGCCGTTTTTCGCACTGG +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILCRTS*SRFSHW
Trigger: CCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGAG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCTCTGCAGGACCTCCTaGAGCCGTTTTTCGCACTGG +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICLCRTS*SRFSHW
Trigger: CCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGAG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTGGATGATCCACTTTTaGTTCCCGGAGCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLWMIHF*FPELKS
Trigger: GGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGATGAAGAGGATGAAGTaGAGCACAATGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLMKRMK*STMEAR
Trigger: CCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCAT...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCAGCACCAGCGTGGATTaGAGCAGCTTCCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISTSVD*SSFRYC
Trigger: GCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGCT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTAGCACCAGCGTGGATTaGAGCAGCTTCCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICSTSVD*SSFRYC
Trigger: GCAGTACCGGAAGCTGCTCAAATCCACGCTGGTGCT...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGCGGCTCCAAGATTTCTaGATCTCAGCTTGTACCTCG +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWRLQDF*ISACTS
Trigger: CGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCG...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCTGCGTGCCTTTCGCTaGAAGTCCAGTGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICLRAFR*KSSASV
Trigger: GACACTGGCACTGGACTTCAAGCGAAAGGCACGCAG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCTGCGTGCCTTTCGCTaGAAGTCCAGTGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSILRAFR*KSSASV
Trigger: GACACTGGCACTGGACTTCAAGCGAAAGGCACGCAG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCGACATTGGTCACACTaGTGTGGGACACCATGGGGC +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIRHWSH*CGTPWG
Trigger: GCCCCATGGTGTCCCACACAAGTGTGACCAATGTCG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTACACGGGGGCCGACATaGGTCACACTTGTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSTRGPT*VTLVWD
Trigger: GTCCCACACAAGTGTGACCAATGTCGGCCCCCGTGT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTAGGAACCCATCGTCCTaGGGAGCAGCCATGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSRNPSS*GAAMAG
Trigger: ACCTGCCATGGCTGCTCCCAAGGACGATGGGTTCCT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCCTGAGCAGGAGCCGTaGAGGAACCCATCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSPEQEP*RNPSSL
Trigger: CAAGGACGATGGGTTCCTCAACGGCTCCTGCTCAGG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS CCA 90 bp ATGAAGAGGATGAAGTTGAGCACAATGGAGGCCAGGATGGGCACCTaGATGATCCACTTTTTGTTCCCGGAGCTCAAGTCCCAGCACCCG +
Preference number: 5 (lower is better)
Translates to: MKRMKLSTMEARMGT*MIHFLFPELKSQHP
Trigger: CGGGTGCTGGGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000430002.6
ENST00000449590.6
CDS CCA 90 bp ATGAAGAGGATGAAGTTGAGCACAATGGAGGCCAGGATGGGCACCTaGATGATCCACTTTTTGTTCCCGGAGCTCAAGTCCCAGCACCCC +
Preference number: 5 (lower is better)
Translates to: MKRMKLSTMEARMGT*MIHFLFPELKSQHP
Trigger: GGGGTGCTGGGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTGGATGATCCACTTTTaGTTCCCGGAGCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPWMIHF*FPELKS
Trigger: GGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTATGAAGAGGATGAAGTaGAGCACAATGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPMKRMK*STMEAR
Trigger: CCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCAT...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGTCACATGACTGTCTCCCATTTCTTGATCTCAGCTaGTACCTCGCCATTGCAGAA +
Preference number: 5 (lower is better)
Translates to: STMSAGPAPSAWSHDCLPFLDLS*YLAIAE
Trigger: TTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAA...TGGGAGACAGTCATGTGACCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCGGCTCCAAGATTTCTaGATCTCAGCTTGTACCTCG +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPRLQDF*ISACTS
Trigger: CGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCGACATTGGTCACACTaGTGTGGGACACCATGGGGC +
Preference number: 5 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSRHWSH*CGTPWG
Trigger: GCCCCATGGTGTCCCACACAAGTGTGACCAATGTCG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000422115.2
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTCGGCTCCAAGATTTCTaGATCTCAGCTTGTACCTGC +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPRLQDF*ISACTC
Trigger: GCAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCG...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422115.2
CDS CCA 90 bp CCTCCTCAGACTCAGGGTAGAGCTTCCCAGATGCCTTATCTTTCCTaGGCTTCCCTGATGTGGACGCAGATGTCCATCCCTTGTCTGATT +
Preference number: 5 (lower is better)
Translates to: PPQTQGRASQMPYLS*ASLMWTQMSIPCLI
Trigger: AATCAGACAAGGGATGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAAGATAAGGCATCTGGGAAGCTCTACCCTGAGTCTGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS-3UTR CAA 90 bp CTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGTTTCTTGATCTCAGCTaGTACCTCGCCATTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LLVHLSIHYVSRSSPQRLFLDLS*YLAIAE
Trigger: TTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAA...CAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CAGCGGCTCCAAGATTTCTTGATCTCAGCTTGTACCTCGCCATTGCAGAAACAGCGACATTGGTCACACTaGTGTGGGACACCATGGGGC +
Preference number: 5 (lower is better)
Translates to: QRLQDFLISACTSPLQKQRHWSH*CGTPWG
Trigger: GCCCCATGGTGTCCCACACAAGTGTGACCAATGTCG...CTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCCTCATCTTTGTCCTaGCTGCTTCCTCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSISSSLS*LLPLPG
Trigger: TCCTGGCAGAGGAAGCAGCAAGGACAAAGATGAGGA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418619.5
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGGGGTGTTCTCGCCATaGCAGAAACAGTATATGATT +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWGVFSP*QKQYMI
Trigger: AATCATATACTGTTTCTGCAATGGCGAGAACACCCC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000422115.2
CDS CCA 90 bp GGTAGAGCTTCCCAGATGCCTTATCTTTCCTGGGCTTCCCTGATGTaGACGCAGATGTCCATCCCTTGTCTGATTCCATTATGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GRASQMPYLSWASLM*TQMSIPCLIPLCWL
Trigger: CAGCCAGCATAATGGAATCAGACAAGGGATGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAAGATAAGGCATCTGGGAAGCTCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTTGGATGATCCACTTTTaGTTCCCGGAGCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICWMIHF*FPELKS
Trigger: GGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCA...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCATGAAGAGGATGAAGTaGAGCACAATGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIMKRMK*STMEAR
Trigger: CCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCAT...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTGGGCTTGTACCTCGCCATaGCAGAAACAGTATATGATT +
Preference number: 5 (lower is better)
Translates to: FWSICPSTMSAGPAPSAWACTSP*QKQYMI
Trigger: AATCATATACTGTTTCTGCAATGGCGAGGTACAAGC...CCAGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TCTTTTGGTCCATCTGTCCATCCACTATGTCAGCAGGTCCAGCCCCCAGCGCCTTTTCTTGATCTCAGCTaGTACCTCGCCATTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SFGPSVHPLCQQVQPPAPFLDLS*YLAIAE
Trigger: TTCTGCAATGGCGAGGTACAAGCTGAGATCAAGAAA...AGGCGCTGGGGGCTGGACCTGCTGACATAGTGGATGGACAGATGGACCAAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCGGCTCCAAGATTTCTaGATCTCAGCTTGTACCTCG +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIRLQDF*ISACTS
Trigger: CGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCGGCTCCAAGATTTCTaGATCTCAGCTTGTACCTCG +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICRLQDF*ISACTS
Trigger: CGAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCGCAGATGTCCATCCCTaGTCTGATTCCATTATGCTG +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIADVHP*SDSIML
Trigger: CAGCATAATGGAATCAGACAAGGGATGGACATCTGC...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTATGAAGAGGATGAAGTaGAGCACAATGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSMKRMK*STMEAR
Trigger: CCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCAT...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCCGTTCACGAGTCTCATaGGTGAGAAATTTGACACAC +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIRSRVS*VRNLTH
Trigger: GTGTGTCAAATTTCTCACCAATGAGACTCGTGAACG...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTCGTTCACGAGTCTCATaGGTGAGAAATTTGACACAC +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICRSRVS*VRNLTH
Trigger: GTGTGTCAAATTTCTCACCAATGAGACTCGTGAACG...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp TTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTCGTTCACGAGTCTCATaGGTGAGAAATTTGACACAC +
Preference number: 5 (lower is better)
Translates to: LAPALSGKSFNHPSFGPSRSRVS*VRNLTH
Trigger: GTGTGTCAAATTTCTCACCAATGAGACTCGTGAACG...AGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp GGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTGTGCTTGTACCTCGCCATaGCAGAAACAGTATATGATT +
Preference number: 5 (lower is better)
Translates to: GPSPEWEIIQPPIFWSICACTSP*QKQYMI
Trigger: AATCATATACTGTTTCTGCAATGGCGAGGTACAAGC...ACAGATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS-3UTR CAA 90 bp CTTGGCCCCAGCCCTGAGTGGGAAATCATTCAACCACCCATCTTTTGGTCCATCTTTCTTGATCTCAGCTaGTACCTGCATCATCTGGAA +
Preference number: 5 (lower is better)
Translates to: LGPSPEWEIIQPPIFWSIFLDLS*YLHHLE
Trigger: TTCCAGATGATGCAGGTACAAGCTGAGATCAAGAAA...GATGGACCAAAAGATGGGTGGTTGAATGATTTCCCACTCAGGGCTGGGGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422115.2
CDS-3UTR CAA 90 bp TTGATCTCAGCTTGTACCTCGCCATTGCAGAAACAGTATATGATTGCGACAAAAGCTTGTACCTCGCCATaGCAGAAACAGTATATGATT +
Preference number: 5 (lower is better)
Translates to: LISACTSPLQKQYMIATKACTSP*QKQYMI
Trigger: AATCATATACTGTTTCTGCAATGGCGAGGTACAAGC...TTTTGTCGCAATCATATACTGTTTCTGCAATGGCGAGGTACAAGCTGAGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS GCA 72 bp CCAGAAGGCTACGTCTCCTCAGCTCCGCGGCAGAGCTaGATCCTTCAGACGCGCCAAGGCGGGGCCGGGGCC +
Preference number: 6 (lower is better)
Translates to: PEGYVSSAPRQS*ILQTRQGGAGA
Trigger: GGCCCCGGCCCCGCCTTGGCGCGTCTGAAGGATGCAGCTCTGCCGCGGAGCTGAGGAGACGTAGCCTTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490109.1
CDS CCA 72 bp CGGGGCAGCCGCCGCCGCCGGCCCAGTTGTGTGTCCTaGACACTACCACTCTTCGGCTGTCTGGACCTCAGT +
Preference number: 6 (lower is better)
Translates to: RGSRRRRPSCVS*TLPLFGCLDLS
Trigger: ACTGAGGTCCAGACAGCCGAAGAGTGGTAGTGTCCAGGACACACAACTGGGCCGGCGGCGGCGGCTGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418619.5
ENST00000449590.6
CDS GCA 72 bp CCCACGTCCTGTTGTGCCCAGGCACCAGCTCCCAGCTaGCATTGCGGTCACAGCGTCGGTAGGCATGGCCTT +
Preference number: 6 (lower is better)
Translates to: PTSCCAQAPAPS*HCGHSVGRHGL
Trigger: AAGGCCATGCCTACCGACGCTGTGACCGCAATGGCAGCTGGGAGCTGGTGCCTGGGCACAACAGGACGTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS CCA 72 bp CTGCAGAGCAGACTCAAGTTGGCCACGGGGAGGCCATaGATAGTCCCTGAGCAGCTTCTGTGGCTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LQSRLKLATGRP*IVPEQLLWLRP
Trigger: AGGCCTGAGCCACAGAAGCTGCTCAGGGACTATCCATGGCCTCCCCGTGGCCAACTTGAGTCTGCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS CAA 90 bp CATGGGCCTTCCAAGTCGGGCCTAAAGCTGCAGAGCAGACTCAAGTaGGCCACGGGGAGGCCATGGATAGTCCCTGAGCAGCTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: HGPSKSGLKLQSRLK*ATGRPWIVPEQLLW
Trigger: CCACAGAAGCTGCTCAGGGACTATCCATGGCCTCCCCGTGGCCAACTTGAGTCTGCTCTGCAGCTTTAGGCCCGACTTGGAAGGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS GCA 72 bp ACGCCAGGGACACGGAGTAGCCCACGGTGTAAATCATaGCCAGGCGGTCAAACACCTCCCGTTCACGAGTCT +
Preference number: 6 (lower is better)
Translates to: TPGTRSSPRCKS*PGGQTPPVHES
Trigger: AGACTCGTGAACGGGAGGTGTTTGACCGCCTGGGCATGATTTACACCGTGGGCTACTCCGTGTCCCTGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS CAA 72 bp ATGGAGGCCAGGATGGGCACCTGGATGATCCACTTTTaGTTCCCGGAGCTCAAGTCCCAGCACCCCAGCCGA +
Preference number: 6 (lower is better)
Translates to: MEARMGTWMIHF*FPELKSQHPSR
Trigger: TCGGCTGGGGTGCTGGGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGCCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428220.1
CDS CAA 72 bp TCCAAGTCGGGCCTAAAGCTGCAGAGCAGACTCAAGTaGGCCACGGGGAGGCCATGGATAGTCCCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: SKSGLKLQSRLK*ATGRPWIVPEQ
Trigger: CTGCTCAGGGACTATCCATGGCCTCCCCGTGGCCAACTTGAGTCTGCTCTGCAGCTTTAGGCCCGACTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449590.6
CDS CAA 90 bp TTGAGCACAATGGAGGCCAGGATGGGCACCTGGATGATCCACTTTTaGTTCCCGGAGCTCAAGTCCCAGCACCCGGTGTTGGCCAGGGTA +
Preference number: 6 (lower is better)
Translates to: LSTMEARMGTWMIHF*FPELKSQHPVLARV
Trigger: TACCCTGGCCAACACCGGGTGCTGGGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGCCTCCATTGTGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000430002.6
ENST00000449590.6
CDS TCA 72 bp ATTCCATTATGCTGGCTGGCCTCTGCAGGACCTCCTTaGGCCGTTTTTCGCACTGGGCCTGAGCACGGTGCA +
Preference number: 6 (lower is better)
Translates to: IPLCWLASAGPP*AVFRTGPEHGA
Trigger: TGCACCGTGCTCAGGCCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGAGGCCAGCCAGCATAATGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS CAA 72 bp ATGGAGGCCAGGATGGGCACCTGGATGATCCACTTTTaGTTCCCGGAGCTCAAGTCCCAGCACCCGGTGTTG +
Preference number: 6 (lower is better)
Translates to: MEARMGTWMIHF*FPELKSQHPVL
Trigger: CAACACCGGGTGCTGGGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGCCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000430002.6
ENST00000449590.6
CDS GCA 72 bp CATCCCTTGTCTGATTCCATTATGCTGGCTGGCCTCTaGAGGACCTCCTTGAGCCGTTTTTCGCACTGGGCC +
Preference number: 6 (lower is better)
Translates to: HPLSDSIMLAGL*RTSLSRFSHWA
Trigger: GGCCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCAGAGGCCAGCCAGCATAATGGAATCAGACAAGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS CAA 72 bp CTGGGCTTCCCTGATGTGGACGCAGATGTCCATCCCTaGTCTGATTCCATTATGCTGGCTGGCCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LGFPDVDADVHP*SDSIMLAGLCR
Trigger: CCTGCAGAGGCCAGCCAGCATAATGGAATCAGACAAGGGATGGACATCTGCGTCCACATCAGGGAAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS TCA 72 bp TGCAGGACCTCCTTGAGCCGTTTTTCGCACTGGGCCTaGGCACGGTGCAGCAGGAAGATCTGTTCCTCTTTA +
Preference number: 6 (lower is better)
Translates to: CRTSLSRFSHWA*ARCSRKICSSL
Trigger: TAAAGAGGAACAGATCTTCCTGCTGCACCGTGCTCAGGCCCAGTGCGAAAAACGGCTCAAGGAGGTCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS CCA 72 bp ACTCAGGGTAGAGCTTCCCAGATGCCTTATCTTTCCTaGGCTTCCCTGATGTGGACGCAGATGTCCATCCCT +
Preference number: 6 (lower is better)
Translates to: TQGRASQMPYLS*ASLMWTQMSIP
Trigger: AGGGATGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAAGATAAGGCATCTGGGAAGCTCTACCCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS CAA 90 bp TTATCTTTCCTGGGCTTCCCTGATGTGGACGCAGATGTCCATCCCTaGTCTGATTCCATTATGCTGGCTGGCCTCTGCAGGACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LSFLGFPDVDADVHP*SDSIMLAGLCRTSL
Trigger: CAAGGAGGTCCTGCAGAGGCCAGCCAGCATAATGGAATCAGACAAGGGATGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAAGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS CCA 72 bp ATGAAGTTGAGCACAATGGAGGCCAGGATGGGCACCTaGATGATCCACTTTTTGTTCCCGGAGCTCAAGTCC +
Preference number: 6 (lower is better)
Translates to: MKLSTMEARMGT*MIHFLFPELKS
Trigger: GGACTTGAGCTCCGGGAACAAAAAGTGGATCATCCAGGTGCCCATCCTGGCCTCCATTGTGCTCAACTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
CDS CCA 72 bp TCCCAGATGCCTTATCTTTCCTGGGCTTCCCTGATGTaGACGCAGATGTCCATCCCTTGTCTGATTCCATTA +
Preference number: 6 (lower is better)
Translates to: SQMPYLSWASLM*TQMSIPCLIPL
Trigger: TAATGGAATCAGACAAGGGATGGACATCTGCGTCCACATCAGGGAAGCCCAGGAAAGATAAGGCATCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313049.9
ENST00000418619.5
ENST00000427125.6
ENST00000428220.1
ENST00000430002.6
ENST00000449590.6
ENST00000490109.1
CDS CAA 72 bp AAGTCCAGTGCCAGTGTCCAGCGGCTCCAAGATTTCTaGATCTCAGCTTGTACCTGCATCATCTGGAAAGAC +
Preference number: 6 (lower is better)
Translates to: KSSASVQRLQDF*ISACTCIIWKD
Trigger: GTCTTTCCAGATGATGCAGGTACAAGCTGAGATCAAGAAATCTTGGAGCCGCTGGACACTGGCACTGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422115.2