Pregenerated sensors for PTGR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000106853Ensembl transcript IDs: ENST00000374308.1, ENST00000374313.5, ENST00000374324.5, ENST00000407693.7, ENST00000422125.1, ENST00000466771.6, ENST00000538962.7
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATAAATaGCAGGACAGTCTAATAATCTGTCTCCCCTTTAAGCCAAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: YLWPLKRQVLFRKYK*QDSLIICLPFKPRF Trigger: GAACCTTGGCTTAAAGGGGAGACAGATTATTAGACTGTCCTGCCATTTATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR CCA 90 bp | TCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTaGGAGTGTGGGAAGGAAGGGTTCATGTTAGTGAGAAAGGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: SPLSQGSFNMCLTFI*ECGKEGFMLVRKGL Trigger: AAGACCCTTTCTCACTAACATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR TCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTGGTAAACGTGTGCCATaGTGGTTTGCTTCACCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RLPQAPACVVPLPMSMCSGKRVP*WFASPV Trigger: GACAGGTGAAGCAAACCATCATGGCACACGTTTACC...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| 3UTR-3UTR TCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTATTAGCTATTTATCCTaGTGCTCTCCCTCCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: RLPQAPACVVPLPMSMCSISYLS*CSPSLT Trigger: GGTGAGGGAGGGAGAGCATCAGGATAAATAGCTAAT...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAGTCCTGTCCTCCATGAACTTGAAGTCAAGGTGGGGCAAGATCCACTTAAACAATCTCTGGGGGTaGGCCTGGGGGAAGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: MEVLSSMNLKSRWGKIHLNNLWG*AWGKWA Trigger: GGCCCACTTCCCCCAGGCCCACCCCCAGAGATTGTT...TAAGTGGATCTTGCCCCACCTTGACTTCAAGTTCATGGAGGACAGGACTTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAGTCCTGTCCTCCATGAACTTGAAGTCAAGGTGGGGCAAGATCCACTTAGCGATCTTGGCTCACTaGAAGCTCCGCCTCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: MEVLSSMNLKSRWGKIHLAILAH*KLRLPG Trigger: ACCTGGGAGGCGGAGCTTGCAGTGAGCCAAGATCGC...TAAGTGGATCTTGCCCCACCTTGACTTCAAGTTCATGGAGGACAGGACTTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR TCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTGCTCCCACTTATGAATaGAAACATACAGTGTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVAPTYE*KHTVFG Trigger: TCCAAACACTGTATGTTTTCATTCATAAGTGGGAGC...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGCTCTGGGGGTGGGCCTaGGGGAAGTGGGCCGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SFNMCLTFIWECGKEGFMLWGWA*GKWAGS Trigger: AGAACCGGCCCACTTCCCCCAGGCCCACCCCCAGAG...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR TCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTGCTCCCACTTATGAATaGAAACATACAGTGTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: RLPQAPACVVPLPMSMCSAPTYE*KHTVFG Trigger: TCCAAACACTGTATGTTTTCATTCATAAGTGGGAGC...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| 3UTR-3UTR TCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTTTCAGCTCCCACTTATaGATGAAAACATACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVFSSHL*MKTYSV Trigger: AACACTGTATGTTTTCATTCATAAGTGGGAGCTGAA...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| 3UTR-3UTR GCA 90 bp | AGCACCCTTCATTACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATTTGAGCTTTGCAATCTaGCCCACGACTGAGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: STLHYLWPLKRQVLFRKYLSFAI*PTTEPT Trigger: TGTGGGCTCAGTCGTGGGGCAGATTGCAAAGCTCAA...ATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAGTCCTGTCCTCCATGAACTTGAAGTCAAGGTGGGGCAAGATCCACTTATTCATGCCATTCTCCTaGCTCAGCCTCCCGACTAGC | + |
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Preference number: 2 (lower is better) Translates to: MEVLSSMNLKSRWGKIHLFMPFS*LSLPTS Trigger: GCTAGTCGGGAGGCTGAGGCAGGAGAATGGCATGAA...TAAGTGGATCTTGCCCCACCTTGACTTCAAGTTCATGGAGGACAGGACTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR TCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTTTCAGCTCCCACTTATaGATGAAAACATACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: RLPQAPACVVPLPMSMCSFSSHL*MKTYSV Trigger: AACACTGTATGTTTTCATTCATAAGTGGGAGCTGAA...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGGTAGGCAGTCAGGCCTaGCATGCCAACTGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VSPLSQGSFNMCLTFIWEVGSQA*HANCPQ Trigger: CTGGGGACAGTTGGCATGCCAGGCCTGACTGCCTAC...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGGGCCTGGGGGAAGTaGGCCGGTTCTGTTATATGT | + |
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Preference number: 2 (lower is better) Translates to: VSPLSQGSFNMCLTFIWEWAWGK*AGSVIC Trigger: ACATATAACAGAACCGGCCCACTTCCCCCAGGCCCA...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGCAACTTTGCAGCCCTTaGGCTTTGCAATCTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VSPLSQGSFNMCLTFIWEQLCSP*ALQSAP Trigger: TGGGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTG...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR TCA 90 bp | GATCATAGTGCGAAATGTCATAAGGCAGTGATTAAGCAATCTCTTTTTCTTTCTATGGTCTCGATCTCCTaGCCTCGTGATCTGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: DHSAKCHKAVIKQSLFLSMVSIS*PRDLPA Trigger: GGCAGGCAGATCACGAGGTCAGGAGATCGAGACCAT...AGAAAGAAAAAGAGATTGCTTAATCACTGCCTTATGACATTTCGCACTATGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGCAGTGGTATTGTGTCTaGCCACTCTGTCAGCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: SFNMCLTFIWECGKEGFMQWYCV*PLCQQL Trigger: AAGCTGCTGACAGAGTGGCCAGACACAATACCACTG...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGCAGAGCCAAAGACAGTaGTATTGTGTCTGGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: SFNMCLTFIWECGKEGFMQSQRQ*YCVWPL Trigger: GAGTGGCCAGACACAATACCACTGTCTTTGGCTCTG...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR GCA 90 bp | GATCATAGTGCGAAATGTCATAAGGCAGTGATTAAGCAATCTCTTTTTCTTTCTAGGCGTGAGCCACCGTaGCCAGAGCGATTAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: DHSAKCHKAVIKQSLFLSRREPP*PERLSN Trigger: ATTGCTTAATCGCTCTGGGCACGGTGGCTCACGCCT...AGAAAGAAAAAGAGATTGCTTAATCACTGCCTTATGACATTTCGCACTATGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGGCTAATGTATTCCAGTaGTGGCTTAGCACTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: VSPLSQGSFNMCLTFIWEANVFQ*WLSTLH Trigger: ATGAAGAGTGCTAAGCCATCACTGGAATACATTAGC...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGGAAAATATTAGCTATTTATCCTaGTGCTCTCCCTCCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: VLIVQLPLMNENIQCLENISYLS*CSPSLT Trigger: GGTGAGGGAGGGAGAGCATCAGGATAAATAGCTAAT...ATTTTCCAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| 3UTR-3UTR CAA 90 bp | AGCACCCTTCATTACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATTTGGCGGGCATCTCCTaGCCAGCGGTAGACGACAAA | + |
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Preference number: 3 (lower is better) Translates to: STLHYLWPLKRQVLFRKYLAGIS*PAVDDK Trigger: TTTGTCGTCTACCGCTGGCAAGGAGATGCCCGCCAA...ATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGCAGAAATGGAGTGCGTaGTCCAGCCTGGAGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: VSPLSQGSFNMCLTFIWEQKWSA*SSLEKP Trigger: TGGCTTCTCCAGGCTGGACAACGCACTCCATTTCTG...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR TCA 72 bp | ACAGAGAAAAGAGCACCCTTCATTACCTCTGGCCCCTaGAGAGGCAGGTCCTATTCAGGAAATATAAATGGC | + |
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Preference number: 3 (lower is better) Translates to: TEKRAPFITSGP*RGRSYSGNING Trigger: GCCATTTATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCTCTTTTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGACAACTTTGCAGCCCTaGAGCTTTGCAATCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: VSPLSQGSFNMCLTFIWETTLQP*SFAICP Trigger: GGGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTGT...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR CAA 90 bp | AGCACCCTTCATTACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATTACTTTCCACAACTCTaGTGTTTGGAGAGAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: STLHYLWPLKRQVLFRKYYFPQL*CLEREI Trigger: AATTTCTCTCTCCAAACACAAGAGTTGTGGAAAGTA...ATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR CAA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGACTGCTCCAACAACTTaGCAGCCCTTGAGCTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: SFNMCLTFIWECGKEGFMTAPTT*QPLSFA Trigger: TGCAAAGCTCAAGGGCTGCAAAGTTGTTGGAGCAGT...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR CCA 72 bp | CCCCTGAAGAGGCAGGTCCTATTCAGGAAATATAAATaGCAGGACAGTCTAATAATCTGTCTCCCCTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: PLKRQVLFRKYK*QDSLIICLPFK Trigger: CTTAAAGGGGAGACAGATTATTAGACTGTCCTGCCATTTATATTTCCTGAATAGGACCTGCCTCTTCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR-3UTR CAA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGCCACAACTCTTGTGTTaGGAGAGAGAAATTGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: SFNMCLTFIWECGKEGFMPQLLC*EREIVK Trigger: CTTTACAATTTCTCTCTCCAAACACAAGAGTTGTGG...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| 3UTR GCA 72 bp | CTTAGCACTCTTCATGGATTTATAGACAAGATTATTTaGTTGAAGTCAGTCAATTACAAAGTAGGGAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: LSTLHGFIDKII*LKSVNYKVGKL Trigger: GAGCTTCCCTACTTTGTAATTGACTGACTTCAAGCAAATAATCTTGTCTATAAATCCATGAAGAGTGCTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS-3UTR CCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTGGTCCCAAGAGAGGGTaGGGCCACCCCAGGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVGPKRG*GHPRAG Trigger: CCCCGCCCTGGGGTGGCCCCACCCTCTCTTGGGACC...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466771.6 |
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| CDS-3UTR GCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTGCCCGAAGGTTCCACTaGCTGGGGAAGGCGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVARRFH*LGKAAG Trigger: CCCAGCCGCCTTCCCCAGGCAGTGGAACCTTCGGGC...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTCTGGGGGTGGGCCTaGGGGAAGTGGGCCGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVLWGWA*GKWAGS Trigger: AGAACCGGCCCACTTCCCCCAGGCCCACCCCCAGAG...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTAACAATCTCTGGGGGTaGGCCTGGGGGAAGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVNNLWG*AWGKWA Trigger: GGCCCACTTCCCCCAGGCCCACCCCCAGAGATTGTT...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR TCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTGCTGCTTCTTTAGGGTaGGAGCCCGGCCCCGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSAASLG*EPGPER Trigger: CCTTTCGGGGCCGGGCTCTCACCCTAAAGAAGCAGC...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466771.6 |
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| CDS-3UTR GCA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGAGTGCGTGTGTGTGCGTaGGCGCCCGCGCGCCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: CHDGLLHLSTHHLGISPRVRVCA*APARPC Trigger: ACACGGGCGCGCGGGCGCGCACGCACACACACGCAC...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466771.6 |
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| CDS-3UTR GCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTGCGCGTATCTCTGTGTaGCTATGTGCATGTGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVARISV*LCACAR Trigger: GCGCGCACATGCACATAGGCACACAGAGATACGCGC...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466771.6 |
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| CDS-3UTR CCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTGTAGGCAGTCAGGCCTaGCATGCCAACTGTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSVGSQA*HANCPQ Trigger: CTGGGGACAGTTGGCATGCCAGGCCTGACTGCCTAC...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR GCA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGAGCCCGAAGGTTCCACTaGCTGGGGAAGGCGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CHDGLLHLSTHHLGISPRARRFH*LGKAAG Trigger: CCCAGCCGCCTTCCCCAGGCAGTGGAACCTTCGGGC...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR TCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCAACTTTGCAGCCCTTaGGCTTTGCAATCTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVQLCSP*ALQSAP Trigger: TGGGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTG...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR TCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTCAACTTTGCAGCCCTTaGGCTTTGCAATCTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSQLCSP*ALQSAP Trigger: TGGGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTG...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR TCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTGGTAAACGTGTGCCATaGTGGTTTGCTTCACCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVGKRVP*WFASPV Trigger: GACAGGTGAAGCAAACCATCATGGCACACGTTTACC...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR GCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTTTGAGCTTTGCAATCTaGCCCACGACTGAGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSLSFAI*PTTEPT Trigger: TGTGGGCTCAGTCGTGGGGCAGATTGCAAAGCTCAA...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CCA 90 bp | CCCGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCAGAGCCAAAGACAGTaGTATTGTGTCTGGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: PGFHRPQRVLFPSLCPCVQSQRQ*YCVWPL Trigger: GAGTGGCCAGACACAATACCACTGTCTTTGGCTCTG...AACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR TCA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGACCGGGGTCCGACTTATaGCAGGTCCCAAGAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CHDGLLHLSTHHLGISPRPGSDL*QVPREG Trigger: ACCCTCTCTTGGGACCTGTCATAAGTCGGACCCCGG...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466771.6 |
||
| CDS-3UTR CCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTCAGTGGTATTGTGTCTaGCCACTCTGTCAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSQWYCV*PLCQQL Trigger: AAGCTGCTGACAGAGTGGCCAGACACAATACCACTG...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR CCA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGAGTAGGCAGTCAGGCCTaGCATGCCAACTGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHDGLLHLSTHHLGISPRVGSQA*HANCPQ Trigger: CTGGGGACAGTTGGCATGCCAGGCCTGACTGCCTAC...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR GCA 90 bp | AGCACCCTTCATTACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATTTGCCCAGGCTGGAGTaGAGTGCCGCGATCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: STLHYLWPLKRQVLFRKYLPRLE*SAAILA Trigger: AGCCAAGATCGCGGCACTGCACTCCAGCCTGGGCAA...ATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTTACTTTCCACAACTTTaGCCACTTGCTGCCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSYFPQL*PLAAPS Trigger: TGATGGGGCAGCAAGTGGCCAAAGTTGTGGAAAGTA...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGTCCTGTCCTCCATGAACTTGAAGTCAAGGTGGGGCAAGATCCACTTAGCAGTGCCGCGATCTTaGCTCACTGCAAGCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MEVLSSMNLKSRWGKIHLAVPRS*LTASSA Trigger: GGCGGAGCTTGCAGTGAGCCAAGATCGCGGCACTGC...TAAGTGGATCTTGCCCCACCTTGACTTCAAGTTCATGGAGGACAGGACTTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR GCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTCTTCAATCTTTTGGCTaGCACTCTCATGTAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSLQSFG*HSHVGI Trigger: GATCCCTACATGAGAGTGGCAGCCAAAAGATTGAAG...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR GCA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGACTCTGTGTGCCTATGTaGATGTGCGCGCGCGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: CHDGLLHLSTHHLGISPRLCVPM*MCARVC Trigger: ACATACGCGCGCGCACATGCACATAGGCACACAGAG...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466771.6 |
||
| CDS-3UTR CCA 90 bp | CTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGTTAGTGAGAAAGGGTCTTCAAACAATCTCTGGGGGTaGGCCTGGGGGAAGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYLGVWEGRVHVSEKGSSNNLWG*AWGKWA Trigger: GGCCCACTTCCCCCAGGCCCACCCCCAGAGATTGTT...TGAAGACCCTTTCTCACTAACATGAACCCTTCCTTCCCACACTCCCAGATAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR TCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTGCTAATGTATTCCAGTaGTGGCTTAGCACTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSANVFQ*WLSTLH Trigger: ATGAAGAGTGCTAAGCCATCACTGGAATACATTAGC...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466771.6 |
||
| CDS-3UTR GCA 90 bp | AGCACCCTTCATTACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATAGGCGTGAGCCACCGTaGCCAGAGCGATTAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: STLHYLWPLKRQVLFRKYRREPP*PERLSN Trigger: ATTGCTTAATCGCTCTGGGCACGGTGGCTCACGCCT...ATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCCTTCATTACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATTGGGCCTGGGGGAAGTaGGCCGGTTCTGTTATATGT | + |
|
Preference number: 4 (lower is better) Translates to: STLHYLWPLKRQVLFRKYWAWGK*AGSVIC Trigger: ACATATAACAGAACCGGCCCACTTCCCCCAGGCCCA...ATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGCTCTGGGGGTGGGCCTaGGGGAAGTGGGCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPLSQGSFNMCLTFIWELWGWA*GKWAGS Trigger: AGAACCGGCCCACTTCCCCCAGGCCCACCCCCAGAG...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGCTCTGGGGGTGGGCCTaGGGGAAGTGGGCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCVLIVQLPLMNENIQCLLWGWA*GKWAGS Trigger: AGAACCGGCCCACTTCCCCCAGGCCCACCCCCAGAG...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGTCCTGTCCTCCATGAACTTGAAGTCAAGGTGGGGCAAGATCCACTTAACCCTTCATTACCTCTaGCCCCTGAAGAGGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MEVLSSMNLKSRWGKIHLTLHYL*PLKRQV Trigger: GACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGT...TAAGTGGATCTTGCCCCACCTTGACTTCAAGTTCATGGAGGACAGGACTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGATACTTTCCACAACTTTaGCCACTTGCTGCCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CHDGLLHLSTHHLGISPRYFPQL*PLAAPS Trigger: TGATGGGGCAGCAAGTGGCCAAAGTTGTGGAAAGTA...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGACCCCAGGGCGGGGCTaGTTCTTTAGGGTGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCVLIVQLPLMNENIQCLTPGRG*FFRVRA Trigger: GGCTCTCACCCTAAAGAAGCAGCCCCGCCCTGGGGT...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466771.6 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGTCCTGTCCTCCATGAACTTGAAGTCAAGGTGGGGCAAGATCCACTTACAGAGCCAAAGACAGTaGTATTGTGTCTGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: MEVLSSMNLKSRWGKIHLQSQRQ*YCVWPL Trigger: GAGTGGCCAGACACAATACCACTGTCTTTGGCTCTG...TAAGTGGATCTTGCCCCACCTTGACTTCAAGTTCATGGAGGACAGGACTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGGTAGGCAGTCAGGCCTaGCATGCCAACTGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFNMCLTFIWECGKEGFMVGSQA*HANCPQ Trigger: CTGGGGACAGTTGGCATGCCAGGCCTGACTGCCTAC...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTATATATTCCTTGTACTaGATTTTACCCTCTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RLPQAPACVVPLPMSMCSIYSLY*ILPSKT Trigger: GGTCTTAGAGGGTAAAATCCAGTACAAGGAATATAT...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000407693.7 |
||
| CDS-3UTR CCA 90 bp | CTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGTTAGTGAGAAAGGGTCTTCACAGTGGTATTGTGTCTaGCCACTCTGTCAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYLGVWEGRVHVSEKGSSQWYCV*PLCQQL Trigger: AAGCTGCTGACAGAGTGGCCAGACACAATACCACTG...TGAAGACCCTTTCTCACTAACATGAACCCTTCCTTCCCACACTCCCAGATAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR TCA 90 bp | AGCACCCTTCATTACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATGCTAATGTATTCCAGTaGTGGCTTAGCACTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STLHYLWPLKRQVLFRKYANVFQ*WLSTLH Trigger: ATGAAGAGTGCTAAGCCATCACTGGAATACATTAGC...ATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCCTTCATTACCTCTGGCCCCTGAAGAGGCAGGTCCTATTCAGGAAATATATTATAATAACTGGTTaGCCACTTGCTGCCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: STLHYLWPLKRQVLFRKYIIITG*PLAAPS Trigger: TGATGGGGCAGCAAGTGGCCAACCAGTTATTATAAT...ATATTTCCTGAATAGGACCTGCCTCTTCAGGGGCCAGAGGTAATGAAGGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR TCA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGCAACTTTGCAGCCCTTaGGCTTTGCAATCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFNMCLTFIWECGKEGFMQLCSP*ALQSAP Trigger: TGGGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTG...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR TCA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGATTCAGCTCCCACTTATaGATGAAAACATACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CHDGLLHLSTHHLGISPRFSSHL*MKTYSV Trigger: AACACTGTATGTTTTCATTCATAAGTGGGAGCTGAA...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR GCA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGTTGAGCTTTGCAATCTaGCCCACGACTGAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SFNMCLTFIWECGKEGFMLSFAI*PTTEPT Trigger: TGTGGGCTCAGTCGTGGGGCAGATTGCAAAGCTCAA...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGTGGGCCTGGGGGAAGTaGGCCGGTTCTGTTATATGT | + |
|
Preference number: 4 (lower is better) Translates to: PCVLIVQLPLMNENIQCLWAWGK*AGSVIC Trigger: ACATATAACAGAACCGGCCCACTTCCCCCAGGCCCA...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR CCA 90 bp | CTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGTTAGTGAGAAAGGGTCTTCATGTTTAACCTTTATCTaGGAGTGTGGGAAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLGVWEGRVHVSEKGSSCLTFI*ECGKEG Trigger: CCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACA...TGAAGACCCTTTCTCACTAACATGAACCCTTCCTTCCCACACTCCCAGATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR TCA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGATTAGCTATTTATCCTaGTGCTCTCCCTCCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PCVLIVQLPLMNENIQCLISYLS*CSPSLT Trigger: GGTGAGGGAGGGAGAGCATCAGGATAAATAGCTAAT...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR GCA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGCTTCAATCTTTTGGCTaGCACTCTCATGTAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VSPLSQGSFNMCLTFIWELQSFG*HSHVGI Trigger: GATCCCTACATGAGAGTGGCAGCCAAAAGATTGAAG...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGGTATTATAATAACTaGTTGGCCACTTGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSPLSQGSFNMCLTFIWEWYYNN*LATCCP Trigger: GGGGCAGCAAGTGGCCAACCAGTTATTATAATACCA...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGAACTTGAAGTCAAGGTaGGGCAAGATCCACTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SFNMCLTFIWECGKEGFMNLKSR*GKIHLH Trigger: GTGTAAGTGGATCTTGCCCCACCTTGACTTCAAGTT...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGGAAAATGGTAAACGTGTGCCATaGTGGTTTGCTTCACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLIVQLPLMNENIQCLENGKRVP*WFASPV Trigger: GACAGGTGAAGCAAACCATCATGGCACACGTTTACC...ATTTTCCAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGCTTCAATCTTTTGGCTaGCACTCTCATGTAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PCVLIVQLPLMNENIQCLLQSFG*HSHVGI Trigger: GATCCCTACATGAGAGTGGCAGCCAAAAGATTGAAG...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR CCA 90 bp | GTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGGAAAATCAGTGGTATTGTGTCTaGCCACTCTGTCAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLIVQLPLMNENIQCLENQWYCV*PLCQQL Trigger: AAGCTGCTGACAGAGTGGCCAGACACAATACCACTG...ATTTTCCAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR TCA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGTTCAGCTCCCACTTATaGATGAAAACATACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCVLIVQLPLMNENIQCLFSSHL*MKTYSV Trigger: AACACTGTATGTTTTCATTCATAAGTGGGAGCTGAA...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR CAA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTACAACTTTGCAGCCCTaGAGCTTTGCAATCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPQAPACVVPLPMSMCSTTLQP*SFAICP Trigger: GGGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTGT...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR CAA 90 bp | CGGCTTCCACAGGCCCCAGCGTGTGTTGTTCCCCTCCCTATGTCCATGTGTTCTACTGCTCCAACAACTTaGCAGCCCTTGAGCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLPQAPACVVPLPMSMCSTAPTT*QPLSFA Trigger: TGCAAAGCTCAAGGGCTGCAAAGTTGTTGGAGCAGT...AGAACACATGGACATAGGGAGGGGAACAACACACGCTGGGGCCTGTGGAAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS GCA 90 bp | GGAAATCTGAGTGCGTTTGTGTGTGTGTGTGCGCGTATCTCTGTGTaGCTATGTGCATGTGCGCGCGCGTATGTGTGCATGTGTGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GNLSAFVCVCARISV*LCACARAYVCMCAC Trigger: ACACGCACACATGCACACATACGCGCGCGCACATGCACATAGGCACACAGAGATACGCGCACACACACACACAAACGCACTCAGATTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466771.6 |
||
| CDS-3UTR CAA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGACAGAAATGGAGTGCGTaGTCCAGCCTGGAGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CHDGLLHLSTHHLGISPRQKWSA*SSLEKP Trigger: TGGCTTCTCCAGGCTGGACAACGCACTCCATTTCTG...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS-3UTR CAA 90 bp | CTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGTTAGTGAGAAAGGGTCTTCATGCAGTGCCGCGATCTaGGCTCACTGCAAGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LYLGVWEGRVHVSEKGSSCSAAI*AHCKLR Trigger: GCGGAGCTTGCAGTGAGCCAAGATCGCGGCACTGCA...TGAAGACCCTTTCTCACTAACATGAACCCTTCCTTCCCACACTCCCAGATAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374324.5 |
||
| CDS GCA 90 bp | TTTCTCAACCTGCCGATCCACCTGGGAACAAAGAGAGAACCCTGTTaGATTGTGGGCTGCTGGCCAGATCCCGCAATAAATCATGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLNLPIHLGTKREPC*IVGCWPDPAINHDL Trigger: CAGGTCATGATTTATTGCGGGATCTGGCCAGCAGCCCACAATGCAACAGGGTTCTCTCTTTGTTCCCAGGTGGATCGGCAGGTTGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374308.1 ENST00000374313.5 |
||
| CDS-3UTR CAA 90 bp | TGCCATGATGGTTTGCTTCACCTGTCAACCCATCACCTAGGTATTAGCCCCCGAACTGCTCCAACAACTTaGCAGCCCTTGAGCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CHDGLLHLSTHHLGISPRTAPTT*QPLSFA Trigger: TGCAAAGCTCAAGGGCTGCAAAGTTGTTGGAGCAGT...TCGGGGGCTAATACCTAGGTGATGGGTTGACAGGTGAAGCAAACCATCATGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
||
| CDS GCA 90 bp | CCGATCCACCTGGGAACAAAGAGAGAACCCTGTTGCATTGTGGGCTaGTGGCCAGATCCCGCAATAAATCATGACCTGGACAAATACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PIHLGTKREPCCIVG*WPDPAINHDLDKYF Trigger: AAAGTATTTGTCCAGGTCATGATTTATTGCGGGATCTGGCCAGCAGCCCACAATGCAACAGGGTTCTCTCTTTGTTCCCAGGTGGATCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374308.1 ENST00000374313.5 |
||
| CDS-3UTR CAA 90 bp | ATGGAAGTCCTGTCCTCCATGAACTTGAAGTCAAGGTGGGGCAAGATCCACTTAACTGCTCCAACAACTTaGCAGCCCTTGAGCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MEVLSSMNLKSRWGKIHLTAPTT*QPLSFA Trigger: TGCAAAGCTCAAGGGCTGCAAAGTTGTTGGAGCAGT...TAAGTGGATCTTGCCCCACCTTGACTTCAAGTTCATGGAGGACAGGACTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS GCA 90 bp | GGACCCAGCTTTCACTATCTTGTGTGTGTCTATTATTTCTCAACCTaGCGATCCACCTGGGAACAAAGAGAGAACCCTGTTGCATTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GPSFHYLVCVYYFST*RSTWEQRENPVALW Trigger: CCACAATGCAACAGGGTTCTCTCTTTGTTCCCAGGTGGATCGGCAGGTTGAGAAATAATAGACACACACAAGATAGTGAAAGCTGGGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374308.1 ENST00000374313.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGCAGAAATGGAGTGCGTaGTCCAGCCTGGAGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SFNMCLTFIWECGKEGFMQKWSA*SSLEKP Trigger: TGGCTTCTCCAGGCTGGACAACGCACTCCATTTCTG...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS-3UTR CAA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGTTGGCGGGCATCTCCTaGCCAGCGGTAGACGACAAA | + |
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Preference number: 5 (lower is better) Translates to: PCVLIVQLPLMNENIQCLLAGIS*PAVDDK Trigger: TTTGTCGTCTACCGCTGGCAAGGAGATGCCCGCCAA...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CAA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGCAGAAATGGAGTGCGTaGTCCAGCCTGGAGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: PCVLIVQLPLMNENIQCLQKWSA*SSLEKP Trigger: TGGCTTCTCCAGGCTGGACAACGCACTCCATTTCTG...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CAA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGCTGTCCTCCATGAACTaGAAGTCAAGGTGGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: SFNMCLTFIWECGKEGFMLSSMN*KSRWGK Trigger: CTTGCCCCACCTTGACTTCAAGTTCATGGAGGACAG...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS-3UTR CAA 90 bp | GATCATAGTGCGAAATGTCATAAGGCAGTGATTAAGCAATCTCTTTTTCTTTCTTTGGCGGGCATCTCCTaGCCAGCGGTAGACGACAAA | + |
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Preference number: 5 (lower is better) Translates to: DHSAKCHKAVIKQSLFLSLAGIS*PAVDDK Trigger: TTTGTCGTCTACCGCTGGCAAGGAGATGCCCGCCAA...AGAAAGAAAAAGAGATTGCTTAATCACTGCCTTATGACATTTCGCACTATGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS-3UTR CAA 90 bp | GTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGGAAAATTTGGCGGGCATCTCCTaGCCAGCGGTAGACGACAAA | + |
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Preference number: 5 (lower is better) Translates to: VLIVQLPLMNENIQCLENLAGIS*PAVDDK Trigger: TTTGTCGTCTACCGCTGGCAAGGAGATGCCCGCCAA...ATTTTCCAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CAA 90 bp | CCATGTGTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGTTACTTTCCACAACTTaGGCCACTTGCTGCCCCATC | + |
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Preference number: 5 (lower is better) Translates to: PCVLIVQLPLMNENIQCLLLSTT*ATCCPI Trigger: GATGGGGCAGCAAGTGGCCAAAGTTGTGGAAAGTAA...CAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAACACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CAA 90 bp | GATCATAGTGCGAAATGTCATAAGGCAGTGATTAAGCAATCTCTTTTTCTTTCTACAACTTTGCAGCCCTaGAGCTTTGCAATCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: DHSAKCHKAVIKQSLFLSTTLQP*SFAICP Trigger: GGGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTGT...AGAAAGAAAAAGAGATTGCTTAATCACTGCCTTATGACATTTCGCACTATGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS-3UTR CAA 90 bp | GTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGGAAAATACAACTTTGCAGCCCTaGAGCTTTGCAATCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: VLIVQLPLMNENIQCLENTTLQP*SFAICP Trigger: GGGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTGT...ATTTTCCAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CAA 90 bp | GTTCTCATTGTTCAGCTCCCACTTATGAATGAAAACATACAGTGTTTGGAAAATTTACTTTCCACAACTTaGGCCACTTGCTGCCCCATC | + |
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Preference number: 5 (lower is better) Translates to: VLIVQLPLMNENIQCLENLLSTT*ATCCPI Trigger: GATGGGGCAGCAAGTGGCCAAAGTTGTGGAAAGTAA...ATTTTCCAAACACTGTATGTTTTCATTCATAAGTGGGAGCTGAACAATGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000407693.7 ENST00000466771.6 |
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| CDS-3UTR CAA 90 bp | GTCTCCCCTTTAAGCCAAGGTTCTTTTAACATGTGTTTAACCTTTATCTGGGAGCCACAACTCTTGTGTTaGGAGAGAGAAATTGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: VSPLSQGSFNMCLTFIWEPQLLC*EREIVK Trigger: CTTTACAATTTCTCTCTCCAAACACAAGAGTTGTGG...CTCCCAGATAAAGGTTAAACACATGTTAAAAGAACCTTGGCTTAAAGGGGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS-3UTR CAA 90 bp | GATCATAGTGCGAAATGTCATAAGGCAGTGATTAAGCAATCTCTTTTTCTTTCTTATTATAATAACTGGTaGGCCACTTGCTGCCCCATC | + |
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Preference number: 5 (lower is better) Translates to: DHSAKCHKAVIKQSLFLSYYNNW*ATCCPI Trigger: GATGGGGCAGCAAGTGGCCAACCAGTTATTATAATA...AGAAAGAAAAAGAGATTGCTTAATCACTGCCTTATGACATTTCGCACTATGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTAACATGTGTTTAACCTTTATCTGGGAGTGTGGGAAGGAAGGGTTCATGTACTTTCCACAACTCTaGTGTTTGGAGAGAGAAATT | + |
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Preference number: 5 (lower is better) Translates to: SFNMCLTFIWECGKEGFMYFPQL*CLEREI Trigger: AATTTCTCTCTCCAAACACAAGAGTTGTGGAAAGTA...CATGAACCCTTCCTTCCCACACTCCCAGATAAAGGTTAAACACATGTTAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374324.5 |
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| CDS CCA 72 bp | AGGAGCCCGAAGGTTCCACTGCCTGGGGAAGGCGGCTaGGACTGCGCAGCCGGGCGCCCGGGGTCCGACTTA | + |
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Preference number: 6 (lower is better) Translates to: RSPKVPLPGEGG*DCAAGRPGSDL Trigger: TAAGTCGGACCCCGGGCGCCCGGCTGCGCAGTCCCAGCCGCCTTCCCCAGGCAGTGGAACCTTCGGGCTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000374313.5 ENST00000422125.1 ENST00000466771.6 ENST00000538962.7 |
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| CDS CAA 72 bp | CCTGCCGATCCACCTGGGAACAAAGAGAGAACCCTGTaGCATTGTGGGCTGCTGGCCAGATCCCGCAATAAA | + |
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Preference number: 6 (lower is better) Translates to: PADPPGNKERTL*HCGLLARSRNK Trigger: TTTATTGCGGGATCTGGCCAGCAGCCCACAATGCAACAGGGTTCTCTCTTTGTTCCCAGGTGGATCGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374308.1 ENST00000374313.5 |
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| CDS CAA 90 bp | CCGCCCTCACTAAACTTAATAATAAATGCGGGTATATTCAGTGCTTaGGTGGCACCACGGAACCAGAAGGCGGTGACGCCCCTGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: PPSLNLIINAGIFSA*VAPRNQKAVTPLDP Trigger: TGGGTCCAGGGGCGTCACCGCCTTCTGGTTCCGTGGTGCCACCAAAGCACTGAATATACCCGCATTTATTATTAAGTTTAGTGAGGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374308.1 ENST00000374313.5 |
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| CDS CCA 72 bp | GGAACAAAGAGAGAACCCTGTTGCATTGTGGGCTGCTaGCCAGATCCCGCAATAAATCATGACCTGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: GTKREPCCIVGC*PDPAINHDLDK Trigger: TTTGTCCAGGTCATGATTTATTGCGGGATCTGGCCAGCAGCCCACAATGCAACAGGGTTCTCTCTTTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374308.1 ENST00000374313.5 |
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| CDS GCA 72 bp | CTCACTAAACTTAATAATAAATGCGGGTATATTCAGTaGTTTGGTGGCACCACGGAACCAGAAGGCGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LTKLNNKCGYIQ*FGGTTEPEGGD Trigger: GTCACCGCCTTCTGGTTCCGTGGTGCCACCAAAGCACTGAATATACCCGCATTTATTATTAAGTTTAGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374308.1 ENST00000374313.5 |
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| CDS GCA 72 bp | TTTCACTATCTTGTGTGTGTCTATTATTTCTCAACCTaGCGATCCACCTGGGAACAAAGAGAGAACCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FHYLVCVYYFST*RSTWEQRENPV Trigger: AACAGGGTTCTCTCTTTGTTCCCAGGTGGATCGGCAGGTTGAGAAATAATAGACACACACAAGATAGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374308.1 ENST00000374313.5 |
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