RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTGIS (Homo sapiens)

Ensembl gene IDs: ENSG00000124212

Ensembl transcript IDs: ENST00000244043.5, ENST00000478971.1

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCACGGAAACCGGCTCTGTCCTCCCACTGGAGGCTGCCAGCTCTaGTTTCCTGCAGAGTTAAGAAGGAGGCGGCAGTGGGGGTCACCC +
Preference number: 1 (lower is better)
Translates to: CHGNRLCPPTGGCQL*FPAELRRRRQWGSP
Trigger: GGGTGACCCCCACTGCCGCCTCCTTCTTAACTCTGCAGGAAATCAGAGCTGGCAGCCTCCAGTGGGAGGACAGAGCCGGTTTCCGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 90 bp AGGAGGCGGCAGTGGGGGTCACCCAGGCGTGAAGATGGGTTTCCCTaGGGATATCCTGCCTCCTGCCAATCACAGCGTCTCTCTGGGAAT +
Preference number: 1 (lower is better)
Translates to: RRRQWGSPRREDGFP*GYPASCQSQRLSGN
Trigger: ATTCCCAGAGAGACGCTGTGATTGGCAGGAGGCAGGATATCCCCAGGGAAACCCATCTTCACGCCTGGGTGACCCCCACTGCCGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 90 bp TCCTGCAGAGTTAAGAAGGAGGCGGCAGTGGGGGTCACCCAGGCGTaGAGATGGGTTTCCCTGGGGATATCCTGCCTCCTGCCAATCACA +
Preference number: 1 (lower is better)
Translates to: SCRVKKEAAVGVTQA*RWVSLGISCLLPIT
Trigger: TGTGATTGGCAGGAGGCAGGATATCCCCAGGGAAACCCATCTTCACGCCTGGGTGACCCCCACTGCCGCCTCCTTCTTAACTCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 90 bp GGGGGAGTCATAAGGGTTTTCGCCCAGCACACCAGGGTTGCAGCCTaGGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: GGVIRVFAQHTRVAA*ARPSIAISAGLLPS
Trigger: GGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAGGCTGCAACCCTGGTGTGCTGGGCGAAAACCCTTATGACTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 90 bp GATCAGTCTAAGGAGTCCTGGCTGGCTCCTTCCAGCCATCTTGTCTaGGCTGTGTCTTCCTTAGCTCCCTACCTGAGTGCTGACACTGAG +
Preference number: 1 (lower is better)
Translates to: DQSKESWLAPSSHLV*AVSSLAPYLSADTE
Trigger: CTCAGTGTCAGCACTCAGGTAGGGAGCTAAGGAAGACACAGCCCAGACAAGATGGCTGGAAGGAGCCAGCCAGGACTCCTTAGACTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 90 bp AGGCGGCTGCCACTCAGCTCTGGCCAAGAGTTACCCTTGGGAATGTaGGCCCAGTGTGGCCAGATATACCAAGTTTTCAAGAGAAGCTGG +
Preference number: 1 (lower is better)
Translates to: RRLPLSSGQELPLGM*AQCGQIYQVFKRSW
Trigger: CCAGCTTCTCTTGAAAACTTGGTATATCTGGCCACACTGGGCTCACATTCCCAAGGGTAACTCTTGGCCAGAGCTGAGTGGCAGCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 90 bp CATAAGGGAGGCGGCTGCCACTCAGCTCTGGCCAAGAGTTACCCTTaGGAATGTGAGCCCAGTGTGGCCAGATATACCAAGTTTTCAAGA +
Preference number: 1 (lower is better)
Translates to: HKGGGCHSALAKSYP*ECEPSVARYTKFSR
Trigger: TCTTGAAAACTTGGTATATCTGGCCACACTGGGCTCACATTCCCAAGGGTAACTCTTGGCCAGAGCTGAGTGGCAGCCGCCTCCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 90 bp ATGTGGCCCCAGGCAAGTCACCTCACCTCTCAGTTTTCTCATCTATaGAGTGGGCACAACCCTCCTTCTCTTCATAGAGATGCTGTGAGG +
Preference number: 1 (lower is better)
Translates to: MWPQASHLTSQFSHL*SGHNPPSLHRDAVR
Trigger: CCTCACAGCATCTCTATGAAGAGAAGGAGGGTTGTGCCCACTTCATAGATGAGAAAACTGAGAGGTGAGGTGACTTGCCTGGGGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 90 bp CCAGTCCCCTTGAGCCCAAAGAACAGGAGTTGCTCATCCAGCATTTaGTCCTGGGACAGTAAATCTGCCTGCAGAGTTCTACAGCTTATG +
Preference number: 1 (lower is better)
Translates to: PVPLSPKNRSCSSSI*SWDSKSACRVLQLM
Trigger: CATAAGCTGTAGAACTCTGCAGGCAGATTTACTGTCCCAGGAGCAAATGCTGGATGAGCAACTCCTGTTCTTTGGGCTCAAGGGGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 90 bp TTTGCTCCTGGGACAGTAAATCTGCCTGCAGAGTTCTACAGCTTATaGGCTATGTGGCCCCAGGCAAGTCACCTCACCTCTCAGTTTTCT +
Preference number: 1 (lower is better)
Translates to: FAPGTVNLPAEFYSL*AMWPQASHLTSQFS
Trigger: AGAAAACTGAGAGGTGAGGTGACTTGCCTGGGGCCACATAGCTCATAAGCTGTAGAACTCTGCAGGCAGATTTACTGTCCCAGGAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 90 bp TCGTCTCCTGAGCTGCACTTCAGTATCTCAGGTAACAGCTGGAGCTaGCTGGTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATG +
Preference number: 1 (lower is better)
Translates to: SSPELHFSISGNSWS*LVGAHLFLECNSLM
Trigger: CATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCACCAGGCAGCTCCAGCTGTTACCTGAGATACTGAAGTGCAGCTCAGGAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 90 bp CCCTTGAGCCCAAAGAACAGGAGTTGCTCATCCAGCATTTGCTCCTaGGACAGTAAATCTGCCTGCAGAGTTCTACAGCTTATGAGCTAT +
Preference number: 1 (lower is better)
Translates to: PLSPKNRSCSSSICS*DSKSACRVLQLMSY
Trigger: ATAGCTCATAAGCTGTAGAACTCTGCAGGCAGATTTACTGTCCCAGGAGCAAATGCTGGATGAGCAACTCCTGTTCTTTGGGCTCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 90 bp AGAGGGACCTCATTATGTGTCTTACAAGATGTACCCAAGTTTAGGTaGCTCTGGCTCTGTCAGCTCCTGAAGTCGAGAAGAATTGTCCCA +
Preference number: 1 (lower is better)
Translates to: RGTSLCVLQDVPKFR*LWLCQLLKSRRIVP
Trigger: TGGGACAATTCTTCTCGACTTCAGGAGCTGACAGAGCCAGAGGCACCTAAACTTGGGTACATCTTGTAAGACACATAATGAGGTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 90 bp TTTGTTCAAAGGGTGGTGCACTCAGGCTGGGTTGGACCAATTAGCTaGTCCCCACCACCTCTTACAATGTCACTTCTAAGAGTTAGAACA +
Preference number: 1 (lower is better)
Translates to: FVQRVVHSGWVGPIS*SPPPLTMSLLRVRT
Trigger: TGTTCTAACTCTTAGAAGTGACATTGTAAGAGGTGGTGGGGACCAGCTAATTGGTCCAACCCAGCCTGAGTGCACCACCCTTTGAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 90 bp ATAACGATTAAAACAAGGGCAGGTTTAAATAATCGTCTCCTGAGCTaGACTTCAGTATCTCAGGTAACAGCTGGAGCTGCCTGGTGGGAG +
Preference number: 1 (lower is better)
Translates to: ITIKTRAGLNNRLLS*TSVSQVTAGAAWWE
Trigger: CTCCCACCAGGCAGCTCCAGCTGTTACCTGAGATACTGAAGTGCAGCTCAGGAGACGATTATTTAAACCTGCCCTTGTTTTAATCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 90 bp ACTCAGCTCTGGCCAAGAGTTACCCTTGGGAATGTGAGCCCAGTGTaGCCAGATATACCAAGTTTTCAAGAGAAGCTGGACATTTTGAAT +
Preference number: 1 (lower is better)
Translates to: TQLWPRVTLGNVSPV*PDIPSFQEKLDILN
Trigger: ATTCAAAATGTCCAGCTTCTCTTGAAAACTTGGTATATCTGGCCACACTGGGCTCACATTCCCAAGGGTAACTCTTGGCCAGAGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 90 bp ACCTCATTATGTGTCTTACAAGATGTACCCAAGTTTAGGTGCCTCTaGCTCTGTCAGCTCCTGAAGTCGAGAAGAATTGTCCCATCACCA +
Preference number: 1 (lower is better)
Translates to: TSLCVLQDVPKFRCL*LCQLLKSRRIVPSP
Trigger: TGGTGATGGGACAATTCTTCTCGACTTCAGGAGCTGACAGAGCCAGAGGCACCTAAACTTGGGTACATCTTGTAAGACACATAATGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGGCCAGCATCCGCTTTaGCTGGATAAGGCCCGGGCC +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQGQHPL*LDKARA
Trigger: GGCCCGGGCCTTATCCAGTCAAAGCGGATGCTGGCC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CAA 90 bp AGGGTTGCAGCCTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTaGCTTCCTTCCCTTCCCAGCCACGATGAGGCAGCTGAGGGTTGC +
Preference number: 2 (lower is better)
Translates to: RVAACARPSIAISAG*LPSLPSHDEAAEGC
Trigger: GCAACCCTCAGCTGCCTCATCGTGGCTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAGGCTGCAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGCTGGACCCAGCCTTCTaGGAGAAAAGCAGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQLDPAF*EKSREV
Trigger: CACTTCCCTGCTTTTCTCCCAGAAGGCTGGGTCCAG...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CAA 90 bp CCTGTCACTCTAGAACAGAGAACTCCACTCCTCAGAGCCCAGTGTTaGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PVTLEQRTPLLRAQC*EGAPVLHRECISLG
Trigger: CCCAAGGCTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGGAGTGGAGTTCTCTGTTCTAGAGTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTACTCCCGACCTCAAGTaGTCCGCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGTPDLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGGTCGGGAGT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCCAGTGTTTGGAGGGTaGCCCTGTTCTGCACCGGGA +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQPVFGG*PCSAPG
Trigger: TCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGCAGAGGCGAGCACGTaGATCCATCTGCTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQAEAST*IHLLPV
Trigger: CACAGGGAGCAGATGGATCCACGTGCTCGCCTCTGC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGACACCTCCGGGAGTTaGGGGCAGAGCAGTGAAGAC +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQDTSGS*GQSSED
Trigger: GTCTTCACTGCTCTGCCCCCAACTCCCGGAGGTGTC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCAGGCTGGAGTGCCGTaGCGCAGTCTCAGTTCACTG +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQQAGVP*RSLSSL
Trigger: CAGTGAACTGAGACTGCGCCACGGCACTCCAGCCTG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCACTAAGGAGTCCTGGCTaGCTCCTTCCAGCCATCTTG +
Preference number: 2 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEALRSPG*LLPAIL
Trigger: CAAGATGGCTGGAAGGAGCCAGCCAGGACTCCTTAG...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGCTCTGTCCTCCCACTaGAGGCTGCCAGCTCTGATT +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQALSSH*RLPALI
Trigger: AATCAGAGCTGGCAGCCTCCAGTGGGAGGACAGAGC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGCAGTCTCAGTTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQAVSVH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAACTGAGACTGC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAATCGCCCAGGCTGGAGTaGCGTGGCGCAGTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKSPRLE*RGAVSV
Trigger: AACTGAGACTGCGCCACGGCACTCCAGCCTGGGCGA...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCCAGCACACCAGGGTTaGAGCCTGCGCAAGACCTTC +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGPAHQG*SLRKTF
Trigger: GAAGGTCTTGCGCAGGCTGCAACCCTGGTGTGCTGG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGGAGGCTGCCAGCTCTaGTTTCCTGCAGAGTTAAGA +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQGGCQL*FPAELR
Trigger: TCTTAACTCTGCAGGAAATCAGAGCTGGCAGCCTCC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAACGAGAGCACATGTCCTaGATAAGGGAGGCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKREHMS*IREAAA
Trigger: GGCAGCCGCCTCCCTTATGCAGGACATGTGCTCTCG...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTATCACAGCGTCTCTCTaGGAATCCTGGGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGITASL*ESWGCL
Trigger: CAGGCACCCCCAGGATTCCCAGAGAGACGCTGTGAT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTTTGGGGGCAGAGCAGTaGAGACTCCTAGTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGLGAEQ*RLLVLP
Trigger: AGGCAGAACTAGGAGTCTTCACTGCTCTGCCCCCAA...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCTGCAGACTGGATCGTaGTCACAGTTGGGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGLQTGS*SQLGLL
Trigger: CAGAAGCCCCAACTGTGATCACGATCCAGTCTGCAG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCCCAAACCCCAGTGCTaGTCTGAGAAGAGACTAGCC +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGPKPQC*SEKRLA
Trigger: GGCTAGTCTCTTCTCAGAGCAGCACTGGGGTTTGGG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAAGCATCCGCTTTGACTaGATAAGGCCCGGGCCATGC +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKSIRFD*IRPGPC
Trigger: GCATGGCCCGGGCCTTATCCAGTCAAAGCGGATGCT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAGGGCAATCTGGCAAATaGGGCCCCAGGGAAGCAGAT +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKGQSGK*GPREAD
Trigger: ATCTGCTTCCCTGGGGCCCCATTTGCCAGATTGCCC...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAATCAGAGCCCAGTGTTTaGAGGGTGCCCCTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKSEPSV*RVPLFC
Trigger: GCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGA...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGTCCAGCATTTGCTCCTaGGACAGTAAATCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQSSICS*DSKSAC
Trigger: GCAGGCAGATTTACTGTCCCAGGAGCAAATGCTGGA...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGAAGTTTAGGTGCCTCTaGCTCTGTCAGCTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQKFRCL*LCQLLK
Trigger: CTTCAGGAGCTGACAGAGCCAGAGGCACCTAAACTT...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CAA 90 bp TGTCAGCTCCTGAAGTCGAGAAGAATTGTCCCATCACCAGTCCCCTaGAGCCCAAAGAACAGGAGTTGCTCATCCAGCATTTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: CQLLKSRRIVPSPVP*SPKNRSCSSSICSW
Trigger: CCAGGAGCAAATGCTGGATGAGCAACTCCTGTTCTTTGGGCTCAAGGGGACTGGTGATGGGACAATTCTTCTCGACTTCAGGAGCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCAGTTTTCTCATCTATaGAGTGGGCACAACCCTCCT +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQQFSHL*SGHNPP
Trigger: AGGAGGGTTGTGCCCACTTCATAGATGAGAAAACTG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCATCACCAGTCCCCTTaGGCCCAAAGAACAGGAGTT +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGHHQSP*AQRTGV
Trigger: AACTCCTGTTCTTTGGGCTCAAGGGGACTGGTGATG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGTGGGGGAAGCTCTCCTaGATTTTCTCAAGTAGTGTG +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQWGKLS*IFSSSV
Trigger: CACACTACTTGAGAAAATGCAGGAGAGCTTCCCCCA...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGCTTCTGCACTAGAATaGATGAAATCGGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAASALE*MKSAPS
Trigger: AGAAGGTGCCGATTTCATGCATTCTAGTGCAGAAGC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGTACCCAAGTTTAGGTaGCTCTGGCTCTGTCAGCTC +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGVPKFR*LWLCQL
Trigger: GAGCTGACAGAGCCAGAGGCACCTAAACTTGGGTAC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAAGTAACGAGGTGAATTaGGAGCAGACAAAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEASNEVN*EQTKPD
Trigger: ATCAGGCTTTGTCTGCTCCCAATTCACCTCGTTACT...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGATCGTGATCACAGTTaGGGCTTCTGCACTAGAATG +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQDRDHS*GFCTRM
Trigger: CATTCTAGTGCAGAAGCCCCAACTGTGATCACGATC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGCCAAGAGTTACCCTTaGGAATGTGAGCCCAGTGTG +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGAKSYP*ECEPSV
Trigger: CACACTGGGCTCACATTCCCAAGGGTAACTCTTGGC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAGAAGGAGGCGGCAGTaGGGGTCACCCAGGCGTGAA +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRRRRRQ*GSPRRE
Trigger: TTCACGCCTGGGTGACCCCCACTGCCGCCTCCTTCT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAATTACCCTTGGGAATGTaGGCCCAGTGTGGCCAGATA +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKLPLGM*AQCGQI
Trigger: TATCTGGCCACACTGGGCTCACATTCCCAAGGGTAA...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAGGGTGCCCCTGTTCTaGACCGGGAATGCATCAGCC +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRRVPLF*TGNASA
Trigger: GGCTGATGCATTCCCGGTGCAGAACAGGGGCACCCT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCCAGCTCTGATTTCCTaGAGAGTTAAGAAGGAGGCG +
Preference number: 2 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGPALIS*RVKKEA
Trigger: CGCCTCCTTCTTAACTCTGCAGGAAATCAGAGCTGG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAGCAACCTCCACCTCCTaGGTTCAAGCAATTCTGGTG +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKATSTS*VQAILV
Trigger: CACCAGAATTGCTTGAACCCAGGAGGTGGAGGTTGC...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAGTGAGAGTAACGAGGTaGATTGGGAGCAGACAAAGC +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKVRVTR*IGSRQS
Trigger: GCTTTGTCTGCTCCCAATTCACCTCGTTACTCTCAC...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAATGGGGGACTGACTGCTaGATGACATCAATGGACACA +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKWGTDC*MTSMDT
Trigger: TGTGTCCATTGATGTCATTCAGCAGTCAGTCCCCCA...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGGTAATGCTAGCACCTaGACCCGGGCCAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRGNAST*TRANCA
Trigger: TGCACAGTTGGCCCGGGTGCAGGTGCTAGCATTACC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGGTCTCACACTCAGATaGCTTCAGGTCCAGGAGGCG +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRGLTLR*LQVQEA
Trigger: CGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGGAGCAGACAAAGCCTaGTTTTGGAAAGAAAACTTT +
Preference number: 2 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQGADKA*FWKENF
Trigger: AAAGTTTTCTTTCCAAAATCAGGCTTTGTCTGCTCC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAGGACTGACTGCTGAATaGCATCAATGGACACAAAGG +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKGLTAE*HQWTQR
Trigger: CCTTTGTGTCCATTGATGTCATTCAGCAGTCAGTCC...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGACCAGGGTTGCAGCCTaGGCAAGACCTTCCATAGCT +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRTRVAA*ARPSIA
Trigger: AGCTATGGAAGGTCTTGCGCAGGCTGCAACCCTGGT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGACACAAAGGACATCCTaGGTGGCCTTTCTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRTQRTS*VAFLWP
Trigger: TGGCCACAGAAAGGCCACTCAGGATGTCCTTTGTGT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGTTGTTCAAAGGGTGGTaGACTCAGGCTGGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRLFKGW*TQAGLD
Trigger: GTCCAACCCAGCCTGAGTGCACCACCCTTTGAACAA...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGGATATCCTGCCTCCTaGCAATCACAGCGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRGYPAS*QSQRLS
Trigger: AGAGAGACGCTGTGATTGGCAGGAGGCAGGATATCC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAATTCATAGAGATGCTGTaGGGAGTAGACATACTGTCT +
Preference number: 2 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKFIEML*GVDILS
Trigger: AGACAGTATGTCTACTCCTCACAGCATCTCTATGAA...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGGATTATTGGGGGACTaGCTGCTGAATGACATCAAT +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRGLLGD*LLNDIN
Trigger: ATTGATGTCATTCAGCAGTCAGTCCCCCAATAATCC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCACAGTTGGGGCTTCTaGACTAGAATGCATGAAATC +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRHSWGF*TRMHEI
Trigger: GATTTCATGCATTCTAGTGCAGAAGCCCCAACTGTG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGTGCTCATCCAGCATTTaGTCCTGGGACAGTAAATCT +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRCSSSI*SWDSKS
Trigger: AGATTTACTGTCCCAGGAGCAAATGCTGGATGAGCA...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAATGTGAGCCCAGTGTaGCCAGATATACCAAGTTTT +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRNVSPV*PDIPSF
Trigger: AAAACTTGGTATATCTGGCCACACTGGGCTCACATT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAGAAGCTGGACATTTTaGATGAACTCTCCCAAAGAT +
Preference number: 2 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRRSWTF*MNSPKD
Trigger: ATCTTTGGGAGAGTTCATTCAAAATGTCCAGCTTCT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp CCTTCCCTTCCCAGCCACGATGAGGCAGCTGAGGGTTaGCACGGAAACCGGCTCTGTCCTCCCACTGGAGGC +
Preference number: 3 (lower is better)
Translates to: PSLPSHDEAAEG*HGNRLCPPTGG
Trigger: GCCTCCAGTGGGAGGACAGAGCCGGTTTCCGTGGCAACCCTCAGCTGCCTCATCGTGGCTGGGAAGGGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 72 bp GTTAAGAAGGAGGCGGCAGTGGGGGTCACCCAGGCGTaGAGATGGGTTTCCCTGGGGATATCCTGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: VKKEAAVGVTQA*RWVSLGISCLL
Trigger: CAGGAGGCAGGATATCCCCAGGGAAACCCATCTTCACGCCTGGGTGACCCCCACTGCCGCCTCCTTCTTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp TCCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTaGACCGGGAATGCATCAGCCTTGGGGGAAGCTCTC +
Preference number: 3 (lower is better)
Translates to: SSEPSVWRVPLF*TGNASALGEAL
Trigger: GAGAGCTTCCCCCAAGGCTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 72 bp CAGTGGGGGTCACCCAGGCGTGAAGATGGGTTTCCCTaGGGATATCCTGCCTCCTGCCAATCACAGCGTCTC +
Preference number: 3 (lower is better)
Translates to: QWGSPRREDGFP*GYPASCQSQRL
Trigger: GAGACGCTGTGATTGGCAGGAGGCAGGATATCCCCAGGGAAACCCATCTTCACGCCTGGGTGACCCCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CAA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCTCAGAGCCCAGTGTTaGGAGGGTGCCCCTGTTCTG +
Preference number: 3 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQLRAQC*EGAPVL
Trigger: CAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 72 bp GGCGGCTGCCACTCAGCTCTGGCCAAGAGTTACCCTTaGGAATGTGAGCCCAGTGTGGCCAGATATACCAAG +
Preference number: 3 (lower is better)
Translates to: GGCHSALAKSYP*ECEPSVARYTK
Trigger: CTTGGTATATCTGGCCACACTGGGCTCACATTCCCAAGGGTAACTCTTGGCCAGAGCTGAGTGGCAGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 72 bp CATCCTGAGTGGCCTTTCTGTGGCCAGCATCCGCTTTaGCTGGATAAGGCCCGGGCCATGCTAGCTCATAAG +
Preference number: 3 (lower is better)
Translates to: HPEWPFCGQHPL*LDKARAMLAHK
Trigger: CTTATGAGCTAGCATGGCCCGGGCCTTATCCAGTCAAAGCGGATGCTGGCCACAGAAAGGCCACTCAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CAA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCCATCACCAGTCCCCTaGAGCCCAAAGAACAGGAGT +
Preference number: 3 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQPSPVP*SPKNRS
Trigger: ACTCCTGTTCTTTGGGCTCAAGGGGACTGGTGATGG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp ATAAGGGTTTTCGCCCAGCACACCAGGGTTGCAGCCTaGGCAAGACCTTCCATAGCTATTTCTGCCGGCTTG +
Preference number: 3 (lower is better)
Translates to: IRVFAQHTRVAA*ARPSIAISAGL
Trigger: CAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAGGCTGCAACCCTGGTGTGCTGGGCGAAAACCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp GGGAGTCATAAGGGTTTTCGCCCAGCACACCAGGGTTaGAGCCTGCGCAAGACCTTCCATAGCTATTTCTGC +
Preference number: 3 (lower is better)
Translates to: GSHKGFRPAHQG*SLRKTFHSYFC
Trigger: GCAGAAATAGCTATGGAAGGTCTTGCGCAGGCTGCAACCCTGGTGTGCTGGGCGAAAACCCTTATGACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 72 bp GGGACAGTAAATCTGCCTGCAGAGTTCTACAGCTTATaGGCTATGTGGCCCCAGGCAAGTCACCTCACCTCT +
Preference number: 3 (lower is better)
Translates to: GTVNLPAEFYSL*AMWPQASHLTS
Trigger: AGAGGTGAGGTGACTTGCCTGGGGCCACATAGCTCATAAGCTGTAGAACTCTGCAGGCAGATTTACTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 72 bp AGGGTGGTGCACTCAGGCTGGGTTGGACCAATTAGCTaGTCCCCACCACCTCTTACAATGTCACTTCTAAGA +
Preference number: 3 (lower is better)
Translates to: RVVHSGWVGPIS*SPPPLTMSLLR
Trigger: TCTTAGAAGTGACATTGTAAGAGGTGGTGGGGACCAGCTAATTGGTCCAACCCAGCCTGAGTGCACCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 72 bp CCACTCAGCTCTGGCCAAGAGTTACCCTTGGGAATGTaGGCCCAGTGTGGCCAGATATACCAAGTTTTCAAG +
Preference number: 3 (lower is better)
Translates to: PLSSGQELPLGM*AQCGQIYQVFK
Trigger: CTTGAAAACTTGGTATATCTGGCCACACTGGGCTCACATTCCCAAGGGTAACTCTTGGCCAGAGCTGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp TACTCCTGCTTCTGTCCCTGGAGAAGGTCAGGGAGATaGCAGTGTGGCCTTAAGGCAATTCTAACACTTGCT +
Preference number: 3 (lower is better)
Translates to: YSCFCPWRRSGR*QCGLKAILTLA
Trigger: AGCAAGTGTTAGAATTGCCTTAAGGCCACACTGGCATCTCCCTGACCTTCTCCAGGGACAGAAGCAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp TCATCCAGCATTTGCTCCTGGGACAGTAAATCTGCCTaGAGAGTTCTACAGCTTATGAGCTATGTGGCCCCA +
Preference number: 3 (lower is better)
Translates to: SSSICSWDSKSA*RVLQLMSYVAP
Trigger: TGGGGCCACATAGCTCATAAGCTGTAGAACTCTGCAGGCAGATTTACTGTCCCAGGAGCAAATGCTGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp GAGCTGCACTTCAGTATCTCAGGTAACAGCTGGAGCTaGCTGGTGGGAGCACATCTTTTCCTTGAGTGTAAT +
Preference number: 3 (lower is better)
Translates to: ELHFSISGNSWS*LVGAHLFLECN
Trigger: ATTACACTCAAGGAAAAGATGTGCTCCCACCAGGCAGCTCCAGCTGTTACCTGAGATACTGAAGTGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 72 bp ACAAAACACGTCTGCAGACTGGATCGTGATCACAGTTaGGGCTTCTGCACTAGAATGCATGAAATCGGCACC +
Preference number: 3 (lower is better)
Translates to: TKHVCRLDRDHS*GFCTRMHEIGT
Trigger: GGTGCCGATTTCATGCATTCTAGTGCAGAAGCCCCAACTGTGATCACGATCCAGTCTGCAGACGTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 72 bp TGGCCAAGAGTTACCCTTGGGAATGTGAGCCCAGTGTaGCCAGATATACCAAGTTTTCAAGAGAAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: WPRVTLGNVSPV*PDIPSFQEKLD
Trigger: GTCCAGCTTCTCTTGAAAACTTGGTATATCTGGCCACACTGGGCTCACATTCCCAAGGGTAACTCTTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp TTGAGCCCAAAGAACAGGAGTTGCTCATCCAGCATTTaGTCCTGGGACAGTAAATCTGCCTGCAGAGTTCTA +
Preference number: 3 (lower is better)
Translates to: LSPKNRSCSSSI*SWDSKSACRVL
Trigger: TAGAACTCTGCAGGCAGATTTACTGTCCCAGGAGCAAATGCTGGATGAGCAACTCCTGTTCTTTGGGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 72 bp TGCACTTCAGTATCTCAGGTAACAGCTGGAGCTGCCTaGTGGGAGCACATCTTTTCCTTGAGTGTAATTCAC +
Preference number: 3 (lower is better)
Translates to: CTSVSQVTAGAA*WEHIFSLSVIH
Trigger: GTGAATTACACTCAAGGAAAAGATGTGCTCCCACCAGGCAGCTCCAGCTGTTACCTGAGATACTGAAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR-3UTR CAA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGAGAAGCTGGACATTTaGAATGAACTCTCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGEKLDI*NELSQR
Trigger: TCTTTGGGAGAGTTCATTCAAAATGTCCAGCTTCTC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR GCA 72 bp AAAACAAGGGCAGGTTTAAATAATCGTCTCCTGAGCTaGACTTCAGTATCTCAGGTAACAGCTGGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: KTRAGLNNRLLS*TSVSQVTAGAA
Trigger: GGCAGCTCCAGCTGTTACCTGAGATACTGAAGTGCAGCTCAGGAGACGATTATTTAAACCTGCCCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 72 bp TGTGTCTTACAAGATGTACCCAAGTTTAGGTGCCTCTaGCTCTGTCAGCTCCTGAAGTCGAGAAGAATTGTC +
Preference number: 3 (lower is better)
Translates to: CVLQDVPKFRCL*LCQLLKSRRIV
Trigger: GACAATTCTTCTCGACTTCAGGAGCTGACAGAGCCAGAGGCACCTAAACTTGGGTACATCTTGTAAGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CCA 72 bp GGCAAATTTTCATCACTGATACATTTGTTCAAAGGGTaGTGCACTCAGGCTGGGTTGGACCAATTAGCTGGT +
Preference number: 3 (lower is better)
Translates to: GKFSSLIHLFKG*CTQAGLDQLAG
Trigger: ACCAGCTAATTGGTCCAACCCAGCCTGAGTGCACCACCCTTTGAACAAATGTATCAGTGATGAAAATTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR TCA 72 bp AGCATTTGTGGATATCACGAGGTGAGAGTAACGAGGTaGATTGGGAGCAGACAAAGCCTGATTTTGGAAAGA +
Preference number: 3 (lower is better)
Translates to: SICGYHEVRVTR*IGSRQSLILER
Trigger: TCTTTCCAAAATCAGGCTTTGTCTGCTCCCAATTCACCTCGTTACTCTCACCTCGTGATATCCACAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGGTCCTTGTCCCCCACTaGCAGGGAGCCACGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQVLVPH*QGATGQ
Trigger: CTGGCCCGTGGCTCCCTGTCAGTGGGGGACAAGGAC...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGCTCGCCCGTCTGCCATaGGCATGGCCAGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQLARLP*AWPGPP
Trigger: TGGTGGACCTGGCCATGCCCATGGCAGACGGGCGAG...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCACCCGCCTGGCCAGCCTaGCTGGGGATAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAPAWPA*LGIAAS
Trigger: GGAAGCTGCTATCCCCAGCCAGGCTGGCCAGGCGGG...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGTCCGGTGGGCCCGCCTaGCCAGCCTGGCTGGGGATA +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQSGGPA*PAWLGI
Trigger: TATCCCCAGCCAGGCTGGCCAGGCGGGCCCACCGGA...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGGCCAGCATCCGCTTTaGCTGGATAAGGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAGQHPL*LDKARA
Trigger: GGCCCGGGCCTTATCCAGTCAAAGCGGATGCTGGCC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGGAAGTCGAGCCTGGTaGGAGGCTCCCACACCACCG +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAGSRAW*EAPTPP
Trigger: CGGTGGTGTGGGAGCCTCGCACCAGGCTCGACTTCC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGGCACGTGGATCCATCTaGTCCCTGTGTCATGGGCGG +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQARGSI*SLCHGR
Trigger: CCGCCCATGACACAGGGAGCAGATGGATCCACGTGC...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGCGTCTGCCATGGGCATaGCCAGGTCCACCACAACCT +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQRLPWA*PGPPQP
Trigger: AGGTTGTGGTGGACCTGGCCATGCCCATGGCAGACG...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGTCCAGGAGGCGCTGTaGATGCAGAAGCAGACCCGG +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAVQEAL*MQKQTR
Trigger: CCGGGTCTGCTTCTGCATTCACAGCGCCTCCTGGAC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGGGGTCACCCAGGCGTaGAGATGGGTTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQGVTQA*RWVSLG
Trigger: CCCCAGGGAAACCCATCTTCACGCCTGGGTGACCCC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAACCAGGGCCCGTGCCTaGATCTCCTCTGACACACCC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEATRARA*ISSDTP
Trigger: GGGTGTGTCAGAGGAGATGCAGGCACGGGCCCTGGT...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGGGAGAGTGGTCGTCTaGGAGACAGGCTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAGRVVV*ETGCSA
Trigger: AGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTCCCTGGGGATATCCTaGCTCCTGCCAATCACAGCG +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQSLGIS*LLPITA
Trigger: CGCTGTGATTGGCAGGAGGCAGGATATCCCCAGGGA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTCAGAGCCCAGTGTTTaGAGGGTGCCCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQSEPSV*RVPLFC
Trigger: GCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGAACTCTCCAGCCATTTaGTCCGGTGGGCCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQNSPAI*SGGPAW
Trigger: CCAGGCGGGCCCACCGGAGCAAATGGCTGGAGAGTT...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGTCGCCCAGGCTGGAGTaGCGTGGCGCAGTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQSPRLE*RGAVSV
Trigger: AACTGAGACTGCGCCACGGCACTCCAGCCTGGGCGA...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGAGTGGACGCGGTCCTaGGCCTGGCTTTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQEWTRS*AWLSWV
Trigger: CACCCATGAAAGCCAGGCCCAGGACCGCGTCCACTC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGACACCTCCGGGAGTTaGGGGCAGAGCAGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEADTSGS*GQSSED
Trigger: GTCTTCACTGCTCTGCCCCCAACTCCCGGAGGTGTC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTCCTGCTTCTGTCCCTaGAGAAGGTCAGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQSCFCP*RRSGRC
Trigger: GCATCTCCCTGACCTTCTCCAGGGACAGAAGCAGGA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGGTCCAGGAGAACGGTaGCATACCTGCCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQGPGER*HTCPQP
Trigger: TGGTTGGGGGCAGGTATGTCACCGTTCTCCTGGACC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTTACCCTTGGGAATGTaGGCCCAGTGTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQLPLGM*AQCGQI
Trigger: TATCTGGCCACACTGGGCTCACATTCCCAAGGGTAA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGGTAATGCTAGCACCTaGACCCGGGCCAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAGNAST*TRANCA
Trigger: TGCACAGTTGGCCCGGGTGCAGGTGCTAGCATTACC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGAGGCAGCTGAGGGTTaGCACGGAAACCGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQEAAEG*HGNRLC
Trigger: ACAGAGCCGGTTTCCGTGGCAACCCTCAGCTGCCTC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGACGGGAGGCAGAGCTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQTGGRA*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAAGCTCTGCCTCCCGT...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGCTGAGATCGTGCCATTaGACTCCAGCCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQLRSCH*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCAATGGCACGATCTCAG...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAAGCCATTTGCTCCGGTaGGCCCGCCTGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKSHLLR*ARLASL
Trigger: CAGGCTGGCCAGGCGGGCCCACCGGAGCAAATGGCT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGTCAGGTAGCCGGCTCTaGGCAGGAAGCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQSGSRL*AGSCRR
Trigger: TCTCCTACAGCTTCCTGCTCAGAGCCGGCTACCTGA...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGGTGAGAGTAACGAGGTaGATTGGGAGCAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQVRVTR*IGSRQS
Trigger: GCTTTGTCTGCTCCCAATTCACCTCGTTACTCTCAC...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAACTCCCGACCTCAAGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKTPDLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGGTCGGGAGT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGACCCCAGTGCTGCTCTaGGAAGAGACTAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQTPVLL*EETSLW
Trigger: CCAGAGGCTAGTCTCTTCTCAGAGCAGCACTGGGGT...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCCTGGCTTTCATGGGTaGGTGGCAGCGCCTCAATTC +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQPGFHG*VAAPQF
Trigger: GAATTGAGGCGCTGCCACGCACCCATGAAAGCCAGG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAACAGGCTGCTCCGCTTaGCAAAGGATACTCTCGAGC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEATGCSA*QRILSS
Trigger: GCTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGT...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGTCTGCGAGACAGGCTaGTCCGCTTGCCAAAGGATA +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAVCETG*SACQRI
Trigger: TATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGAC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGAGGGATCTCCACATCTaGGTTGATCAGCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQRDLHI*VDQLQV
Trigger: GACTTGGAGCTGATCAACGCAGATGTGGAGATCCCT...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGTTCTGCACCGGGAATaGATCAGCCTTGGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQVLHRE*ISLGGS
Trigger: GCTTCCCCCAAGGCTGATGCATTCCCGGTGCAGAAC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGCAGTCTCAGTTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAAVSVH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAACTGAGACTGC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGGTAACAGCTGGAGCTaGCTGGTGGGAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAGNSWS*LVGAHL
Trigger: AAGATGTGCTCCCACCAGGCAGCTCCAGCTGTTACC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCATTGGGCGTGGTGGTGTaGGCCTGTAATCTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEALGVVV*ACNLSY
Trigger: GTAGCTGAGATTACAGGCGCACACCACCACGCCCAA...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCACTGGACCCAGCCTTCTaGGAGAAAAGCAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEALDPAF*EKSREV
Trigger: CACTTCCCTGCTTTTCTCCCAGAAGGCTGGGTCCAG...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGCTGAGGCAGGAGAATaGTGTGAACACGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQAEAGE*CEHGRQ
Trigger: CTGCCTCCCGTGTTCACACCATTCTCCTGCCTCAGC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTTTGGCCACACCAGCATaGAGCCCCCTTCCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGLATPA*SPLPQR
Trigger: TCGCTGGGGAAGGGGGCTCCATGCTGGTGTGGCCAA...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CAA 72 bp CTAGAACAGAGAACTCCACTCCTCAGAGCCCAGTGTTaGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: LEQRTPLLRAQC*EGAPVLHRECI
Trigger: GATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGGAGTGGAGTTCTCTGTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCATCTCCTTCATCCTCGTaGGGAAGCTGGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEASPSSS*GSWQHL
Trigger: AAGATGCTGCCAGCTTCCTCACGAGGATGAAGGAGA...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCTGCAGACTGGATCGTaGTCACAGTTGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQLQTGS*SQLGLL
Trigger: CAGAAGCCCCAACTGTGATCACGATCCAGTCTGCAG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGCAGTTTTCTCATCTATaGAGTGGGCACAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQQFSHL*SGHNPP
Trigger: AGGAGGGTTGTGCCCACTTCATAGATGAGAAAACTG...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTTTGGGCAAGACCTGTaGAATCTCAGAGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQFGQDL*NLRACF
Trigger: GAAACAGGCTCTGAGATTTCACAGGTCTTGCCCAAA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCACCAGGTCGCCGCGTaGGGCGGCGGCTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRHQVAA*GGGSVA
Trigger: TGCTACTGAGCCGCCGCCGCACGCGGCGACCTGGTG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGATCGCCCAACAGCACTaGATGGAGGTTGGTATACAT +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQIAQQH*MEVGIH
Trigger: ATGTATACCAACCTCCATGCAGTGCTGTTGGGCGAT...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTAGGGTGCCCCTGTTCTaGACCGGGAATGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGRVPLF*TGNASA
Trigger: GGCTGATGCATTCCCGGTGCAGAACAGGGGCACCCT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCCAGTGTTTGGAGGGTaGCCCTGTTCTGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGPVFGG*PCSAPG
Trigger: TCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCATTGTTCAAAGGGTGGTaGACTCAGGCTGGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEALFKGW*TQAGLD
Trigger: GTCCAACCCAGCCTGAGTGCACCACCCTTTGAACAA...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCGCGTCGTAGGAGTGTaGGTCCAGGAGAACGGTGAC +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGRVVGV*VQENGD
Trigger: GTCACCGTTCTCCTGGACCCACACTCCTACGACGCG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTGGCCTTTTCATCACTaGGGCTGTAATGTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQWPFHH*GCNVEA
Trigger: AGCTTCCACATTACAGCCCCAGTGATGAAAAGGCCA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAATGGGCCTGGCTTTCATaGGTGCGTGGCAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKWAWLS*VRGSAS
Trigger: TGAGGCGCTGCCACGCACCCATGAAAGCCAGGCCCA...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCATTGACACTGCACATGTaGTCCTTGTCCCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEALTLHM*SLSPTD
Trigger: GTCAGTGGGGGACAAGGACCACATGTGCAGTGTCAA...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCAGGCTGGAGTGCCGTaGCGCAGTCTCAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGQAGVP*RSLSSL
Trigger: CAGTGAACTGAGACTGCGCCACGGCACTCCAGCCTG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAAGAAGGAGGCGGCAGTaGGGGTCACCCAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKRRRRQ*GSPRRE
Trigger: TTCACGCCTGGGTGACCCCCACTGCCGCCTCCTTCT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGAGAGCTCTCAGCCTTaGCCACACCAGCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGESSQP*PHQHGA
Trigger: GGCTCCATGCTGGTGTGGCCAAGGCTGAGAGCTCTC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAACACCACGTCGCAGGTTaGATTCTCGCCCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKHHVAG*ILARLP
Trigger: TGGCAGACGGGCGAGAATTCAACCTGCGACGTGGTG...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGAAAGTCTTTCTTCTCTaGTCCGTCAGGGTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQKVFLL*SVRVQE
Trigger: TTCCTGAACCCTGACGGATCAGAGAAGAAAGACTTT...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCATCTCCACATCTGCGTTaGTCAGCTCCAAGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEASPHLR*SAPSPS
Trigger: ACTTGGACTTGGAGCTGATCAACGCAGATGTGGAGA...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCATCACCAGTCCCCTTaGGCCCAAAGAACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQHHQSP*AQRTGV
Trigger: AACTCCTGTTCTTTGGGCTCAAGGGGACTGGTGATG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTTCTTTGAAGGCAGGTaGGAATCTAGTCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQFFEGR*ESSLSD
Trigger: GTCACTGAGACTAGATTCTCACCTGCCTTCAAAGAA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAGAATTCTCGCCCGTCTaGCATGGGCATGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKEFSPV*HGHGQV
Trigger: GACCTGGCCATGCCCATGGCAGACGGGCGAGAATTC...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGGTCTCACACTCAGATaGCTTCAGGTCCAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGGLTLR*LQVQEA
Trigger: CGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAACCAGCACACCAGGGTTaGAGCCTGCGCAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKPAHQG*SLRKTF
Trigger: GAAGGTCTTGCGCAGGCTGCAACCCTGGTGTGCTGG...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGAATCGTCTCCTGAGCTaGACTTCAGTATCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQNRLLS*TSVSQV
Trigger: TACCTGAGATACTGAAGTGCAGCTCAGGAGACGATT...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAACATGGAAGTCGAGCCTaGTGCGAGGCTCCCACACCA +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKHGSRA*CEAPTP
Trigger: TGGTGTGGGAGCCTCGCACCAGGCTCGACTTCCATG...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGAGTAACGAGGTGAATTaGGAGCAGACAAAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQSNEVN*EQTKPD
Trigger: ATCAGGCTTTGTCTGCTCCCAATTCACCTCGTTACT...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGATCAGTTGGGCGTGGTaGTGTGCGCCTGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQISWAW*CAPVIS
Trigger: TGAGATTACAGGCGCACACCACCACGCCCAACTGAT...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGGGCTTCAGGATTCTTaGGAAGGAAGAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGGLQDS*EGRAGA
Trigger: GGCTCCTGCTCTTCCTTCTCAAGAATCCTGAAGCCC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTTCATAGAGATGCTGTaGGGAGTAGACATACTGTCT +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQFIEML*GVDILS
Trigger: AGACAGTATGTCTACTCCTCACAGCATCTCTATGAA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCATGGCTTCTGTGAGTaGCTGGAGCTCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGHGFCE*LELSVE
Trigger: CTCCACAGAGAGCTCCAGGCACTCACAGAAGCCATG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCATGGGGGAAGCTCTCCTaGATTTTCTCAAGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAWGKLS*IFSSSV
Trigger: CACACTACTTGAGAAAATGCAGGAGAGCTTCCCCCA...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCACCAAAGAACAGGAGTTaGTCATCCAGCATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAPKNRS*SSSICS
Trigger: GGAGCAAATGCTGGATGAGCAACTCCTGTTCTTTGG...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCTATTTCTGCCGGCTTaGTTCCTTCCCTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGLFLPA*FLPFPA
Trigger: GGCTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGCCTGGAGCTCTCTGTaGAGAAGAGTCAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQAWSSL*RRVSFI
Trigger: GATGAAACTGACTCTTCTCCACAGAGAGCTCCAGGC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGCTTTCATGGGTGCGTaGCAGCGCCTCAATTCCGTA +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGAFMGA*QRLNSV
Trigger: TACGGAATTGAGGCGCTGCCACGCACCCATGAAAGC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGACGCGGTCCTGGGCCTaGCTTTCATGGGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRTRSWA*LSWVRG
Trigger: GCCACGCACCCATGAAAGCCAGGCCCAGGACCGCGT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAAGCAGCCGGTCGAGCTaGCGAAAGGTGTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKSSRSS*RKVWKT
Trigger: TGTCTTCCACACCTTTCGCCAGCTCGACCGGCTGCT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAGCCACGGGCCAGTTTaGGGAGCAGCCGGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRSHGPV*GAAGRA
Trigger: AGCTCGACCGGCTGCTCCCCAAACTGGCCCGTGGCT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAACCATATTCCCCTGTGTaGCCCACAGCTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKPYSPV*PTAAAP
Trigger: TGGTGCTGCAGCTGTGGGCCACACAGGGGAATATGG...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAACCTTCTGTGGGAGAGTaGTCGTCTGCGAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKPSVGE*SSARQA
Trigger: AGCCTGTCTCGCAGACGACCACTCTCCCACAGAAGG...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAGCTCTGTCCTCCCACTaGAGGCTGCCAGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKALSSH*RLPALI
Trigger: AATCAGAGCTGGCAGCCTCCAGTGGGAGGACAGAGC...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTACAGCTGGAGCTGCCTaGTGGGAGCACATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGTAGAA*WEHIFS
Trigger: GGAAAAGATGTGCTCCCACCAGGCAGCTCCAGCTGT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGTGGAAGACATCAGCTaGGTGGACGCGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRVEDIS*VDAVLG
Trigger: GCCCAGGACCGCGTCCACTCAGCTGATGTCTTCCAC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAGGATTATTGGGGGACTaGCTGCTGAATGACATCAAT +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAGLLGD*LLNDIN
Trigger: ATTGATGTCATTCAGCAGTCAGTCCCCCAATAATCC...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGAATCATCAAAATCAATaGCTTTGGGCAAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQNHQNQ*LWARPV
Trigger: CACAGGTCTTGCCCAAAGTCATTGATTTTGATGATT...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGTGTGTCATGGGCGGATaGGGTAGCGGACGGGCACGT +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRCVMGG*GSGRAR
Trigger: ACGTGCCCGTCCGCTACCGCATCCGCCCATGACACA...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCACACAGTTGGGGCTTCTaGACTAGAATGCATGAAATC +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEAHSWGF*TRMHEI
Trigger: GATTTCATGCATTCTAGTGCAGAAGCCCCAACTGTG...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTAGAAGGTCAGGGAGATaGCAGTGTGGCCTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGRRSGR*QCGLKA
Trigger: TGCCTTAAGGCCACACTGGCATCTCCCTGACCTTCT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAATTTCTGGGTCTCTCTaGGGGCTCAGGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKISGSL*GLRKGK
Trigger: CTTCCCCTTCCTGAGCCCCCAGAGAGACCCAGAAAT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCTGCTCCCTGTGTCATaGGCGGATGCGGTAGCGGAC +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRLLPVS*ADAVAD
Trigger: GTCCGCTACCGCATCCGCCCATGACACAGGGAGCAG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAACTAAGGAGTCCTGGCTaGCTCCTTCCAGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKLRSPG*LLPAIL
Trigger: CAAGATGGCTGGAAGGAGCCAGCCAGGACTCCTTAG...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGCAACCTCCACCTCCTaGGTTCAAGCAATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGATSTS*VQAILV
Trigger: CACCAGAATTGCTTGAACCCAGGAGGTGGAGGTTGC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGGACATTCAGAGGTCTaGGGTTCTTTTATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQGHSEV*GSFISL
Trigger: GAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAATCTCAGGTAACAGCTaGAGCTGCCTGGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKISGNS*SCLVGA
Trigger: TGCTCCCACCAGGCAGCTCCAGCTGTTACCTGAGAT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGAATACAAAAATCAGTTaGGCGTGGTGGTGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQNTKIS*AWWCAP
Trigger: AGGCGCACACCACCACGCCCAACTGATTTTTGTATT...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAACACAAAGGACATCCTaGGTGGCCTTTCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKTQRTS*VAFLWP
Trigger: TGGCCACAGAAAGGCCACTCAGGATGTCCTTTGTGT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTAGCTCCAAGTCCAAGTaGACCAGCACAAGGAACACA +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGSSKSK*TSTRNT
Trigger: TGTGTTCCTTGTGCTGGTGCACTTGGACTTGGAGCT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAGTACCCAAGTTTAGGTaGCTCTGGCTCTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKVPKFR*LWLCQL
Trigger: GAGCTGACAGAGCCAGAGGCACCTAAACTTGGGTAC...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCCGAGATCACGCCACTaGACTCTAGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRPRSRH*TLAWAA
Trigger: TGCTGCCCAGGCTAGAGTGCAGTGGCGTGATCTCGG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCAACTGGGGCTGTAATGTaGAAGCTGCACATCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEATGAVM*KLHIKN
Trigger: ATTTTTGATGTGCAGCTTCCACATTACAGCCCCAGT...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTCCCAACAGCACTGCATaGAGGTTGGTATACATGGCT +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGPNSTA*RLVYMA
Trigger: AGCCATGTATACCAACCTCCATGCAGTGCTGTTGGG...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAAGCTGGCGAAAGGTGTaGAAGACATCAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKSWRKV*KTSAEW
Trigger: CCACTCAGCTGATGTCTTCCACACCTTTCGCCAGCT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGCAGAGGCGAGCACGTaGATCCATCTGCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRAEAST*IHLLPV
Trigger: CACAGGGAGCAGATGGATCCACGTGCTCGCCTCTGC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTAAAATCAGTTGGGCGTaGTGGTGTGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGKISWA*WCAPVI
Trigger: GATTACAGGCGCACACCACCACGCCCAACTGATTTT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAATATACATGGCTTCTGTaGGTGCCTGGAGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKYTWLL*VPGALC
Trigger: ACAGAGAGCTCCAGGCACTCACAGAAGCCATGTATA...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAGGAGACCCATCTCGTaGCAGCCACTGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRRRPIS*QPLPAS
Trigger: AGAAGCAGGCAGTGGCTGGCACGAGATGGGTCTCCT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGACGTCGTGTTCCGGCTaGATCAGACCGAAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRTSCSG*IRPKPY
Trigger: GTACGGCTTCGGTCTGATGCAGCCGGAACACGACGT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGAGGCATAACAATCACTaGTACTCAGGAAACACTGTG +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQRHNNH*YSGNTV
Trigger: CACAGTGTTTCCTGAGTAGCAGTGATTGTTATGCCT...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAGAGTCAGTTTCATCCTaGCCTTTTCATCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKESVSS*PFHHWG
Trigger: GCCCCAGTGATGAAAAGGCCAGGATGAAACTGACTC...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAGCATCCGCTTTGACTaGATAAGGCCCGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRSIRFD*IRPGPC
Trigger: GCATGGCCCGGGCCTTATCCAGTCAAAGCGGATGCT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGGGCAATCTGGCAAATaGGGCCCCAGGGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRGQSGK*GPREAD
Trigger: ATCTGCTTCCCTGGGGCCCCATTTGCCAGATTGCCC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGAATGTGAGCCCAGTGTaGCCAGATATACCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQNVSPV*PDIPSF
Trigger: AAAACTTGGTATATCTGGCCACACTGGGCTCACATT...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAATCCAGCATTTGCTCCTaGGACAGTAAATCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKSSICS*DSKSAC
Trigger: GCAGGCAGATTTACTGTCCCAGGAGCAAATGCTGGA...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAAAGTTTAGGTGCCTCTaGCTCTGTCAGCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKKFRCL*LCQLLK
Trigger: CTTCAGGAGCTGACAGAGCCAGAGGCACCTAAACTT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CAA 72 bp AGCCGGGGCAAAGGCAAATTTTCATCACTGATACATTaGTTCAAAGGGTGGTGCACTCAGGCTGGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: SRGKGKFSSLIH*FKGWCTQAGLD
Trigger: GTCCAACCCAGCCTGAGTGCACCACCCTTTGAACAAATGTATCAGTGATGAAAATTTGCCTTTGCCCCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
3UTR CAA 72 bp CTGAAGTCGAGAAGAATTGTCCCATCACCAGTCCCCTaGAGCCCAAAGAACAGGAGTTGCTCATCCAGCATT +
Preference number: 4 (lower is better)
Translates to: LKSRRIVPSPVP*SPKNRSCSSSI
Trigger: AATGCTGGATGAGCAACTCCTGTTCTTTGGGCTCAAGGGGACTGGTGATGGGACAATTCTTCTCGACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCGAAGCCGTACCTGCTaGGGTCAAACTCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRRSRTC*GQTQGS
Trigger: AGATCCCTGAGTTTGACCTCAGCAGGTACGGCTTCG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAGGTGGAGGTTGTGGTaGGCTGAGATCGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRRWRLW*AEIVPL
Trigger: CAATGGCACGATCTCAGCTCACCACAACCTCCACCT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCCCAAACCCCAGTGCTaGTCTGAGAAGAGACTAGCC +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRPKPQC*SEKRLA
Trigger: GGCTAGTCTCTTCTCAGAGCAGCACTGGGGTTTGGG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGCCCCCAAACCCCAGTaGTGCTCTGAGAAGAGACTA +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRAPKPQ*CSEKRL
Trigger: TAGTCTCTTCTCAGAGCAGCACTGGGGTTTGGGGGC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGAAGATGGGTTTCCCTaGGGATATCCTGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPREDGFP*GYPASC
Trigger: GCAGGAGGCAGGATATCCCCAGGGAAACCCATCTTC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTACCTTTAAAGGGAATTaGCCCTTCTTTGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGTFKGN*PFFEGR
Trigger: CCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGTCCACAGGCGACTTTTaGCACTGCACATGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRSTGDF*HCTCGP
Trigger: AGGACCACATGTGCAGTGTCAAAAGTCGCCTGTGGA...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGCTTCTGTGAGTGCCTaGAGCTCTCTGTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRASVSA*SSLWRR
Trigger: TCTTCTCCACAGAGAGCTCCAGGCACTCACAGAAGC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGCCAAGAGTTACCCTTaGGAATGTGAGCCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRAKSYP*ECEPSV
Trigger: CACACTGGGCTCACATTCCCAAGGGTAACTCTTGGC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGAAGAGACTAGCCTCTaGGACATTCAGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPREETSL*DIQRSG
Trigger: CCCAGACCTCTGAATGTCCCAGAGGCTAGTCTCTTC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGTGGGGGACTGACTGCTaGATGACATCAATGGACACA +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRWGTDC*MTSMDT
Trigger: TGTGTCCATTGATGTCATTCAGCAGTCAGTCCCCCA...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGGCAATTCTAACACTTaGTTATCTCGTTTTGTAACA +
Preference number: 4 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQGNSNT*LSRFVT
Trigger: TGTTACAAAACGAGATAAGCAAGTGTTAGAATTGCC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGTAATCTCAGCTACTTaGGAAGCTGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRVISAT*EAEAEA
Trigger: TGCTTCTGCCTCAGCTTCCCAAGTAGCTGAGATTAC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR GCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGTATCAAGCACAGGTGTaGTGTCTAGAACCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRYQAQV*CLEPSV
Trigger: CACAGAAGGTTCTAGACAGCACACCTGTGCTTGATA...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGGAGCAGACAAAGCCTaGTTTTGGAAAGAAAACTTT +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRGADKA*FWKENF
Trigger: AAAGTTTTCTTTCCAAAATCAGGCTTTGTCTGCTCC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR TCA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGTTCTTAAGCAAGGGATaGAGAAATACAATGGCATCC +
Preference number: 4 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRFLSKG*RNTMAS
Trigger: GGATGCCATTGTATTTCTTCATCCCTTGCTTAAGAA...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS CCA 90 bp GGCTGGGCAGAGGCGAGCACGTGGATCCATCTGCTCCCTGTGTCATaGGCGGATGCGGTAGCGGACGGGCACGTCGTGTTCCGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: GWAEASTWIHLLPVS*ADAVADGHVVFRLH
Trigger: ATGCAGCCGGAACACGACGTGCCCGTCCGCTACCGCATCCGCCCATGACACAGGGAGCAGATGGATCCACGTGCTCGCCTCTGCCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS TCA 90 bp GGGGAGCAGCCGGTCGAGCTGGCGAAAGGTGTGGAAGACATCAGCTaGGTGGACGCGGTCCTGGGCCTGGCTTTCATGGGTGCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: GEQPVELAKGVEDIS*VDAVLGLAFMGAWQ
Trigger: CTGCCACGCACCCATGAAAGCCAGGCCCAGGACCGCGTCCACTCAGCTGATGTCTTCCACACCTTTCGCCAGCTCGACCGGCTGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 90 bp ACACACCCATCTCCTCCAGGTGCAGCAGGTAACTCTCCAGCCATTTaGTCCGGTGGGCCCGCCTGGCCAGCCTGGCTGGGGATAGCAGCT +
Preference number: 5 (lower is better)
Translates to: THPSPPGAAGNSPAI*SGGPAWPAWLGIAA
Trigger: AGCTGCTATCCCCAGCCAGGCTGGCCAGGCGGGCCCACCGGAGCAAATGGCTGGAGAGTTACCTGCTGCACCTGGAGGAGATGGGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 90 bp AGAGGCGAGCACGTGGATCCATCTGCTCCCTGTGTCATGGGCGGATaGGGTAGCGGACGGGCACGTCGTGTTCCGGCTGCATCAGACCGA +
Preference number: 5 (lower is better)
Translates to: RGEHVDPSAPCVMGG*GSGRARRVPAASDR
Trigger: TCGGTCTGATGCAGCCGGAACACGACGTGCCCGTCCGCTACCGCATCCGCCCATGACACAGGGAGCAGATGGATCCACGTGCTCGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS CCA 90 bp CCACGGGCCAGTTTGGGGAGCAGCCGGTCGAGCTGGCGAAAGGTGTaGAAGACATCAGCTGAGTGGACGCGGTCCTGGGCCTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: PRASLGSSRSSWRKV*KTSAEWTRSWAWLS
Trigger: TGAAAGCCAGGCCCAGGACCGCGTCCACTCAGCTGATGTCTTCCACACCTTTCGCCAGCTCGACCGGCTGCTCCCCAAACTGGCCCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 90 bp ACTGACAGGGAGCCACGGGCCAGTTTGGGGAGCAGCCGGTCGAGCTaGCGAAAGGTGTGGAAGACATCAGCTGAGTGGACGCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: TDREPRASLGSSRSS*RKVWKTSAEWTRSW
Trigger: CCAGGACCGCGTCCACTCAGCTGATGTCTTCCACACCTTTCGCCAGCTCGACCGGCTGCTCCCCAAACTGGCCCGTGGCTCCCTGTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 90 bp GAGGAGGAGGCGGTCACCACGTCGCAGGTTGAATTCTCGCCCGTCTaGCATGGGCATGGCCAGGTCCACCACAACCTCGCGGGTGATGAA +
Preference number: 5 (lower is better)
Translates to: EEEAVTTSQVEFSPV*HGHGQVHHNLAGDE
Trigger: TTCATCACCCGCGAGGTTGTGGTGGACCTGGCCATGCCCATGGCAGACGGGCGAGAATTCAACCTGCGACGTGGTGACCGCCTCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 90 bp ACCTTCTGTGGGAGAGTGGTCGTCTGCGAGACAGGCTGCTCCGCTTaGCAAAGGATACTCTCGAGCTCTCCGCGGACAGCAGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TFCGRVVVCETGCSA*QRILSSSPRTAARA
Trigger: AGCCCTGGCTGCTGTCCGCGGAGAGCTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCCACAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 90 bp GTCGAGCCTGGTGCGAGGCTCCCACACCACCGCGTCGTAGGAGTGTaGGTCCAGGAGAACGGTGACATACCTGCCCCCAACCAGTATAGT +
Preference number: 5 (lower is better)
Translates to: VEPGARLPHHRVVGV*VQENGDIPAPNQYS
Trigger: ACTATACTGGTTGGGGGCAGGTATGTCACCGTTCTCCTGGACCCACACTCCTACGACGCGGTGGTGTGGGAGCCTCGCACCAGGCTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS CCA 90 bp ACATGTGGTCCTTGTCCCCCACTGACAGGGAGCCACGGGCCAGTTTaGGGAGCAGCCGGTCGAGCTGGCGAAAGGTGTGGAAGACATCAG +
Preference number: 5 (lower is better)
Translates to: TCGPCPPLTGSHGPV*GAAGRAGERCGRHQ
Trigger: CTGATGTCTTCCACACCTTTCGCCAGCTCGACCGGCTGCTCCCCAAACTGGCCCGTGGCTCCCTGTCAGTGGGGGACAAGGACCACATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS-3UTR CAA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGAGCCACGGGCCAGTTaGGGGAGCAGCCGGTCGAGC +
Preference number: 5 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQEPRAS*GSSRSS
Trigger: GCTCGACCGGCTGCTCCCCAAACTGGCCCGTGGCTC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGTCACCACGTCGCAGGTaGAATTCTCGCCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQSPRRR*NSRPSA
Trigger: GGCAGACGGGCGAGAATTCAACCTGCGACGTGGTGA...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp CCTCAGAGCCCAGTGTTTGGAGGGTGCCCCTGTTCTGCACCGGGAATGCATCAGAGAGAGCTCTCAGCCTaGGCCACACCAGCATGGAGC +
Preference number: 5 (lower is better)
Translates to: PQSPVFGGCPCSAPGMHQRELSA*ATPAWS
Trigger: GCTCCATGCTGGTGTGGCCAAGGCTGAGAGCTCTCT...CTGATGCATTCCCGGTGCAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS GCA 90 bp CTGTCTAGAACCTTCTGTGGGAGAGTGGTCGTCTGCGAGACAGGCTaGTCCGCTTGCCAAAGGATACTCTCGAGCTCTCCGCGGACAGCA +
Preference number: 5 (lower is better)
Translates to: LSRTFCGRVVVCETG*SACQRILSSSPRTA
Trigger: TGCTGTCCGCGGAGAGCTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCCACAGAAGGTTCTAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS-3UTR CAA 90 bp GGGTCTCACACTCAGATGCCTTCAGGTCCAGGAGGCGCTGTGAATGCAGAAGCACTGCACATGTGGTCCTaGTCCCCCACTGACAGGGAG +
Preference number: 5 (lower is better)
Translates to: GSHTQMPSGPGGAVNAEALHMWS*SPTDRE
Trigger: CTCCCTGTCAGTGGGGGACAAGGACCACATGTGCAG...TGCTTCTGCATTCACAGCGCCTCCTGGACCTGAAGGCATCTGAGTGTGAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS GCA 90 bp CTCGTGCCAGCCACTGCCTGCTTCTGTAGCATCGCCCAACAGCACTaGATGGAGGTTGGTATACATGGCTTCTGTGAGTGCCTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: LVPATACFCSIAQQH*MEVGIHGFCECLEL
Trigger: GAGCTCCAGGCACTCACAGAAGCCATGTATACCAACCTCCATGCAGTGCTGTTGGGCGATGCTACAGAAGCAGGCAGTGGCTGGCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 90 bp GCTGTAGGAGAAGTCGAGGAGACCCATCTCGTGCCAGCCACTGCCTaGTTCTGTAGCATCGCCCAACAGCACTGCATGGAGGTTGGTATA +
Preference number: 5 (lower is better)
Translates to: AVGEVEETHLVPATA*FCSIAQQHCMEVGI
Trigger: TATACCAACCTCCATGCAGTGCTGTTGGGCGATGCTACAGAAGCAGGCAGTGGCTGGCACGAGATGGGTCTCCTCGACTTCTCCTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 90 bp AGCACAGGTGTGCTGTCTAGAACCTTCTGTGGGAGAGTGGTCGTCTaGGAGACAGGCTGCTCCGCTTGCCAAAGGATACTCTCGAGCTCT +
Preference number: 5 (lower is better)
Translates to: STGVLSRTFCGRVVV*ETGCSACQRILSSS
Trigger: AGAGCTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCCACAGAAGGTTCTAGACAGCACACCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS-3UTR CAA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGGACAGGCTGCTCCGCTaGCCAAAGGATACTCTCGAG +
Preference number: 5 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQDRLLR*PKDTLE
Trigger: CTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGTC...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS CCA 90 bp CGCTATCAAGCACAGGTGTGCTGTCTAGAACCTTCTGTGGGAGAGTaGTCGTCTGCGAGACAGGCTGCTCCGCTTGCCAAAGGATACTCT +
Preference number: 5 (lower is better)
Translates to: RYQAQVCCLEPSVGE*SSARQAAPLAKGYS
Trigger: AGAGTATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCCACAGAAGGTTCTAGACAGCACACCTGTGCTTGATAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 90 bp ACCGAAGCCGTACCTGCTGAGGTCAAACTCAGGGATCTCCACATCTaGGTTGATCAGCTCCAAGTCCAAGTGCACCAGCACAAGGAACAC +
Preference number: 5 (lower is better)
Translates to: TEAVPAEVKLRDLHI*VDQLQVQVHQHKEH
Trigger: GTGTTCCTTGTGCTGGTGCACTTGGACTTGGAGCTGATCAACGCAGATGTGGAGATCCCTGAGTTTGACCTCAGCAGGTACGGCTTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS-3UTR CAA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGCTATTTCTGCCGGCTaGCTTCCTTCCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGAISAG*LPSLPS
Trigger: GCTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS TCA 90 bp CACTGGGGCTGTAATGTGGAAGCTGCACATCAAAAATCCTCTCCATaGGGAAGATGGCATAGGCATGGAAGTCGAGCCTGGTGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: HWGCNVEAAHQKSSP*GRWHRHGSRAWCEA
Trigger: AGCCTCGCACCAGGCTCGACTTCCATGCCTATGCCATCTTCCTCATGGAGAGGATTTTTGATGTGCAGCTTCCACATTACAGCCCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS TCA 90 bp CATCGCCCAACAGCACTGCATGGAGGTTGGTATACATGGCTTCTGTaGGTGCCTGGAGCTCTCTGTGGAGAAGAGTCAGTTTCATCCTGG +
Preference number: 5 (lower is better)
Translates to: HRPTALHGGWYTWLL*VPGALCGEESVSSW
Trigger: CCAGGATGAAACTGACTCTTCTCCACAGAGAGCTCCAGGCACTCACAGAAGCCATGTATACCAACCTCCATGCAGTGCTGTTGGGCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTTTCCACAGGCGACTTTaGACACTGCACATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGFHRRL*TLHMWS
Trigger: GGACCACATGTGCAGTGTCAAAAGTCGCCTGTGGAA...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAACCATCACCAGTCCCCTaGAGCCCAAAGAACAGGAGT +
Preference number: 5 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKPSPVP*SPKNRS
Trigger: ACTCCTGTTCTTTGGGCTCAAGGGGACTGGTGATGG...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCCCAGCACACCAGGGTaGCAGCCTGCGCAAGACCTT +
Preference number: 5 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRPSTPG*QPAQDL
Trigger: AAGGTCTTGCGCAGGCTGCAACCCTGGTGTGCTGGG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCAGGCAGGTAGGGCATaGCCAGCTCCCTGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRQAGRA*PAPCEW
Trigger: CCACTCACAGGGAGCTGGCAATGCCCTACCTGCCTG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS TCA 90 bp CATCGCCCAACAGCACTGCATGGAGGTTGGTATACATGGCTTCTGTaGGTGCCTGGAGCTCTCTGTGGAGAAGAGTCAGTAAAGATGTCA +
Preference number: 5 (lower is better)
Translates to: HRPTALHGGWYTWLL*VPGALCGEESVKMS
Trigger: TGACATCTTTACTGACTCTTCTCCACAGAGAGCTCCAGGCACTCACAGAAGCCATGTATACCAACCTCCATGCAGTGCTGTTGGGCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478971.1
CDS-3UTR CAA 90 bp CTAGCCTCTGGGACATTCAGAGGTCTGGGGTTCTTTTATCTCCCTCCAGCTAAAAGGGCTTCAGGATTCTaGAGAAGGAAGAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LASGTFRGLGFFYLPPAKRASGF*RRKSRS
Trigger: GCTCCTGCTCTTCCTTCTCAAGAATCCTGAAGCCCT...TTTAGCTGGAGGGAGATAAAAGAACCCCAGACCTCTGAATGTCCCAGAGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGCACAAGGAACACAAATaGTTTGATGCTGTTGACCGC +
Preference number: 5 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQHKEHK*FDAVDR
Trigger: GCGGTCAACAGCATCAAACAATTTGTGTTCCTTGTG...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTATCTCCACATCTGCGTaGATCAGCTCCAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGISTSA*ISSKSK
Trigger: CTTGGACTTGGAGCTGATCAACGCAGATGTGGAGAT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGCTCAGAGCCCAGTGTTaGGAGGGTGCCCCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRLRAQC*EGAPVL
Trigger: CAGAACAGGGGCACCCTCCAAACACTGGGCTCTGAG...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTAAATACAAAAATCAGTaGGGCGTGGTGGTGTGCGCC +
Preference number: 5 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGKYKNQ*GVVVCA
Trigger: GGCGCACACCACCACGCCCAACTGATTTTTGTATTT...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp CTGCGCAAGACCTTCCATAGCTATTTCTGCCGGCTTGCTTCCTTCCCTTCCCAGTCATCACTGATACATTaGTTCAAAGGGTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: LRKTFHSYFCRLASFPSQSSLIH*FKGWCT
Trigger: AGTGCACCACCCTTTGAACAAATGTATCAGTGATGA...CTGGGAAGGGAAGGAAGCAAGCCGGCAGAAATAGCTATGGAAGGTCTTGCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS GCA 90 bp AACTCAGGGATCTCCACATCTGCGTTGATCAGCTCCAAGTCCAAGTaGACCAGCACAAGGAACACAAATTGTTTGATGCTGTTGACCGCA +
Preference number: 5 (lower is better)
Translates to: NSGISTSALISSKSK*TSTRNTNCLMLLTA
Trigger: TGCGGTCAACAGCATCAAACAATTTGTGTTCCTTGTGCTGGTGCACTTGGACTTGGAGCTGATCAACGCAGATGTGGAGATCCCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS-3UTR CAA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGAGCACTGCATGGAGGTaGGTATACATGGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRSTAWR*VYMASV
Trigger: CACAGAAGCCATGTATACCAACCTCCATGCAGTGCT...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GGTTCCAAGGAGGTGCGACCTTTAAAGGGAATTGGCCCTTCTTTGAAGGCAGGTGGTCACTTTCTATTTTaGGCAGTGAGTGATACATGT +
Preference number: 5 (lower is better)
Translates to: GSKEVRPLKGIGPSLKAGGHFLF*AVSDTC
Trigger: ACATGTATCACTCACTGCCAAAAATAGAAAGTGACC...ACCTGCCTTCAAAGAAGGGCCAATTCCCTTTAAAGGTCGCACCTCCTTGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGGAATTGGCCCTTCTTaGAAGGCAGGTGAGAATCTA +
Preference number: 5 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRGIGPS*KAGENL
Trigger: TAGATTCTCACCTGCCTTCAAAGAAGGGCCAATTCC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGGGTTCAGGAATCGGTaGTATTTAAATACCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VGAHLFLECNSLMTVVPRGFRNR*YLNTSG
Trigger: CCCAGAGGTATTTAAATACAACCGATTCCTGAACCC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS-3UTR CAA 90 bp GTGGGAGCACATCTTTTCCTTGAGTGTAATTCACTAATGACTGTGGTTCCAAGGGAGAAGCTGGACATTTaGAATGAACTCTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: VGAHLFLECNSLMTVVPREKLDI*NELSQR
Trigger: TCTTTGGGAGAGTTCATTCAAAATGTCCAGCTTCTC...CCTTGGAACCACAGTCATTAGTGAATTACACTCAAGGAAAAGATGTGCTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS TCA 90 bp GTAATTCTTCAGCCGTTTCCCATCCTTGTAAAAGTCTTTCTTCTCTaGTCCGTCAGGGTTCAGGAATCGGTTGTATTTAAATACCTCTGG +
Preference number: 5 (lower is better)
Translates to: VILQPFPILVKVFLL*SVRVQESVVFKYLW
Trigger: CCAGAGGTATTTAAATACAACCGATTCCTGAACCCTGACGGATCAGAGAAGAAAGACTTTTACAAGGATGGGAAACGGCTGAAGAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp CCTTGTCCCCCACTGACAGGGAGCCACGGGCCAGTTTaGGGAGCAGCCGGTCGAGCTGGCGAAAGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: PCPPLTGSHGPV*GAAGRAGERCG
Trigger: TCCACACCTTTCGCCAGCTCGACCGGCTGCTCCCCAAACTGGCCCGTGGCTCCCTGTCAGTGGGGGACAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp GGTAACTCTCCAGCCATTTGCTCCGGTGGGCCCGCCTaGCCAGCCTGGCTGGGGATAGCAGCTTCCACAGGC +
Preference number: 6 (lower is better)
Translates to: GNSPAICSGGPA*PAWLGIAASTG
Trigger: GCCTGTGGAAGCTGCTATCCCCAGCCAGGCTGGCCAGGCGGGCCCACCGGAGCAAATGGCTGGAGAGTTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CAA 72 bp TCCTTGTCCCCCACTGACAGGGAGCCACGGGCCAGTTaGGGGAGCAGCCGGTCGAGCTGGCGAAAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SLSPTDREPRAS*GSSRSSWRKVW
Trigger: CCACACCTTTCGCCAGCTCGACCGGCTGCTCCCCAAACTGGCCCGTGGCTCCCTGTCAGTGGGGGACAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 72 bp GCGGTCACCACGTCGCAGGTTGAATTCTCGCCCGTCTaGCATGGGCATGGCCAGGTCCACCACAACCTCGCG +
Preference number: 6 (lower is better)
Translates to: AVTTSQVEFSPV*HGHGQVHHNLA
Trigger: CGCGAGGTTGTGGTGGACCTGGCCATGCCCATGGCAGACGGGCGAGAATTCAACCTGCGACGTGGTGACCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 72 bp CACGTGGATCCATCTGCTCCCTGTGTCATGGGCGGATaGGGTAGCGGACGGGCACGTCGTGTTCCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: HVDPSAPCVMGG*GSGRARRVPAA
Trigger: TGCAGCCGGAACACGACGTGCCCGTCCGCTACCGCATCCGCCCATGACACAGGGAGCAGATGGATCCACGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS CCA 72 bp GGTGCGAGGCTCCCACACCACCGCGTCGTAGGAGTGTaGGTCCAGGAGAACGGTGACATACCTGCCCCCAAC +
Preference number: 6 (lower is better)
Translates to: GARLPHHRVVGV*VQENGDIPAPN
Trigger: GTTGGGGGCAGGTATGTCACCGTTCTCCTGGACCCACACTCCTACGACGCGGTGGTGTGGGAGCCTCGCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS CCA 72 bp GAGGCGAGCACGTGGATCCATCTGCTCCCTGTGTCATaGGCGGATGCGGTAGCGGACGGGCACGTCGTGTTC +
Preference number: 6 (lower is better)
Translates to: EASTWIHLLPVS*ADAVADGHVVF
Trigger: GAACACGACGTGCCCGTCCGCTACCGCATCCGCCCATGACACAGGGAGCAGATGGATCCACGTGCTCGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS CCA 72 bp AGTTTGGGGAGCAGCCGGTCGAGCTGGCGAAAGGTGTaGAAGACATCAGCTGAGTGGACGCGGTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SLGSSRSSWRKV*KTSAEWTRSWA
Trigger: GGCCCAGGACCGCGTCCACTCAGCTGATGTCTTCCACACCTTTCGCCAGCTCGACCGGCTGCTCCCCAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp GAGCCACGGGCCAGTTTGGGGAGCAGCCGGTCGAGCTaGCGAAAGGTGTGGAAGACATCAGCTGAGTGGACG +
Preference number: 6 (lower is better)
Translates to: EPRASLGSSRSS*RKVWKTSAEWT
Trigger: CGTCCACTCAGCTGATGTCTTCCACACCTTTCGCCAGCTCGACCGGCTGCTCCCCAAACTGGCCCGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CAA 90 bp CACATGTGGTCCTTGTCCCCCACTGACAGGGAGCCACGGGCCAGTTaGGGGAGCAGCCGGTCGAGCTGGCGAAAGGTGTGGAAGACATCA +
Preference number: 6 (lower is better)
Translates to: HMWSLSPTDREPRAS*GSSRSSWRKVWKTS
Trigger: TGATGTCTTCCACACCTTTCGCCAGCTCGACCGGCTGCTCCCCAAACTGGCCCGTGGCTCCCTGTCAGTGGGGGACAAGGACCACATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CAA 90 bp CGCCTGGCCAGCCTGGCTGGGGATAGCAGCTTCCACAGGCGACTTTaGACACTGCACATGTGGTCCTTGTCCCCCACTGACAGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: RLASLAGDSSFHRRL*TLHMWSLSPTDREP
Trigger: TGGCTCCCTGTCAGTGGGGGACAAGGACCACATGTGCAGTGTCAAAAGTCGCCTGTGGAAGCTGCTATCCCCAGCCAGGCTGGCCAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CAA 90 bp AACCTTCTGTGGGAGAGTGGTCGTCTGCGAGACAGGCTGCTCCGCTaGCCAAAGGATACTCTCGAGCTCTCCGCGGACAGCAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: NLLWESGRLRDRLLR*PKDTLELSADSSQG
Trigger: GCCCTGGCTGCTGTCCGCGGAGAGCTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCCACAGAAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS TCA 72 bp CCGGTCGAGCTGGCGAAAGGTGTGGAAGACATCAGCTaGGTGGACGCGGTCCTGGGCCTGGCTTTCATGGGT +
Preference number: 6 (lower is better)
Translates to: PVELAKGVEDIS*VDAVLGLAFMG
Trigger: ACCCATGAAAGCCAGGCCCAGGACCGCGTCCACTCAGCTGATGTCTTCCACACCTTTCGCCAGCTCGACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 72 bp GGGAGAGTGGTCGTCTGCGAGACAGGCTGCTCCGCTTaGCAAAGGATACTCTCGAGCTCTCCGCGGACAGCA +
Preference number: 6 (lower is better)
Translates to: GRVVVCETGCSA*QRILSSSPRTA
Trigger: TGCTGTCCGCGGAGAGCTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp GTGGACGCGGTCCTGGGCCTGGCTTTCATGGGTGCGTaGCAGCGCCTCAATTCCGTAAAGAGTCAGGTAGCC +
Preference number: 6 (lower is better)
Translates to: VDAVLGLAFMGA*QRLNSVKSQVA
Trigger: GGCTACCTGACTCTTTACGGAATTGAGGCGCTGCCACGCACCCATGAAAGCCAGGCCCAGGACCGCGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp TGGAAGACATCAGCTGAGTGGACGCGGTCCTGGGCCTaGCTTTCATGGGTGCGTGGCAGCGCCTCAATTCCG +
Preference number: 6 (lower is better)
Translates to: WKTSAEWTRSWA*LSWVRGSASIP
Trigger: CGGAATTGAGGCGCTGCCACGCACCCATGAAAGCCAGGCCCAGGACCGCGTCCACTCAGCTGATGTCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp AAGGTGTGGAAGACATCAGCTGAGTGGACGCGGTCCTaGGCCTGGCTTTCATGGGTGCGTGGCAGCGCCTCA +
Preference number: 6 (lower is better)
Translates to: KVWKTSAEWTRS*AWLSWVRGSAS
Trigger: TGAGGCGCTGCCACGCACCCATGAAAGCCAGGCCCAGGACCGCGTCCACTCAGCTGATGTCTTCCACACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CAA 72 bp TGGGAGAGTGGTCGTCTGCGAGACAGGCTGCTCCGCTaGCCAAAGGATACTCTCGAGCTCTCCGCGGACAGC +
Preference number: 6 (lower is better)
Translates to: WESGRLRDRLLR*PKDTLELSADS
Trigger: GCTGTCCGCGGAGAGCTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp AGCAGCTTCCACAGGCGACTTTTGACACTGCACATGTaGTCCTTGTCCCCCACTGACAGGGAGCCACGGGCC +
Preference number: 6 (lower is better)
Translates to: SSFHRRLLTLHM*SLSPTDREPRA
Trigger: GGCCCGTGGCTCCCTGTCAGTGGGGGACAAGGACCACATGTGCAGTGTCAAAAGTCGCCTGTGGAAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 72 bp GAAGTCGAGGAGACCCATCTCGTGCCAGCCACTGCCTaGTTCTGTAGCATCGCCCAACAGCACTGCATGGAG +
Preference number: 6 (lower is better)
Translates to: EVEETHLVPATA*FCSIAQQHCME
Trigger: CTCCATGCAGTGCTGTTGGGCGATGCTACAGAAGCAGGCAGTGGCTGGCACGAGATGGGTCTCCTCGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 72 bp ACCTTCTGTGGGAGAGTGGTCGTCTGCGAGACAGGCTaGTCCGCTTGCCAAAGGATACTCTCGAGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: TFCGRVVVCETG*SACQRILSSSP
Trigger: CGGAGAGCTCGAGAGTATCCTTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCCACAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp GCACAGGTGTGCTGTCTAGAACCTTCTGTGGGAGAGTaGTCGTCTGCGAGACAGGCTGCTCCGCTTGCCAAA +
Preference number: 6 (lower is better)
Translates to: AQVCCLEPSVGE*SSARQAAPLAK
Trigger: TTTGGCAAGCGGAGCAGCCTGTCTCGCAGACGACCACTCTCCCACAGAAGGTTCTAGACAGCACACCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CAA 72 bp AGCCTGGCTGGGGATAGCAGCTTCCACAGGCGACTTTaGACACTGCACATGTGGTCCTTGTCCCCCACTGAC +
Preference number: 6 (lower is better)
Translates to: SLAGDSSFHRRL*TLHMWSLSPTD
Trigger: GTCAGTGGGGGACAAGGACCACATGTGCAGTGTCAAAAGTCGCCTGTGGAAGCTGCTATCCCCAGCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 72 bp GCCACTGCCTGCTTCTGTAGCATCGCCCAACAGCACTaGATGGAGGTTGGTATACATGGCTTCTGTGAGTGC +
Preference number: 6 (lower is better)
Translates to: ATACFCSIAQQH*MEVGIHGFCEC
Trigger: GCACTCACAGAAGCCATGTATACCAACCTCCATGCAGTGCTGTTGGGCGATGCTACAGAAGCAGGCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 72 bp GTACCTGCTGAGGTCAAACTCAGGGATCTCCACATCTaGGTTGATCAGCTCCAAGTCCAAGTGCACCAGCAC +
Preference number: 6 (lower is better)
Translates to: VPAEVKLRDLHI*VDQLQVQVHQH
Trigger: GTGCTGGTGCACTTGGACTTGGAGCTGATCAACGCAGATGTGGAGATCCCTGAGTTTGACCTCAGCAGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CAA 72 bp CTGCTGAGGTCAAACTCAGGGATCTCCACATCTGCGTaGATCAGCTCCAAGTCCAAGTGCACCAGCACAAGG +
Preference number: 6 (lower is better)
Translates to: LLRSNSGISTSA*ISSKSKCTSTR
Trigger: CCTTGTGCTGGTGCACTTGGACTTGGAGCTGATCAACGCAGATGTGGAGATCCCTGAGTTTGACCTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CAA 90 bp AAGCCGTACCTGCTGAGGTCAAACTCAGGGATCTCCACATCTGCGTaGATCAGCTCCAAGTCCAAGTGCACCAGCACAAGGAACACAAAT +
Preference number: 6 (lower is better)
Translates to: KPYLLRSNSGISTSA*ISSKSKCTSTRNTN
Trigger: ATTTGTGTTCCTTGTGCTGGTGCACTTGGACTTGGAGCTGATCAACGCAGATGTGGAGATCCCTGAGTTTGACCTCAGCAGGTACGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS GCA 72 bp CACTGCATGGAGGTTGGTATACATGGCTTCTGTGAGTaGCTGGAGCTCTCTGTGGAGAAGAGTCAGTTTCAT +
Preference number: 6 (lower is better)
Translates to: HCMEVGIHGFCE*LELSVEKSQFH
Trigger: ATGAAACTGACTCTTCTCCACAGAGAGCTCCAGGCACTCACAGAAGCCATGTATACCAACCTCCATGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS GCA 72 bp ATCTCCACATCTGCGTTGATCAGCTCCAAGTCCAAGTaGACCAGCACAAGGAACACAAATTGTTTGATGCTG +
Preference number: 6 (lower is better)
Translates to: ISTSALISSKSK*TSTRNTNCLML
Trigger: CAGCATCAAACAATTTGTGTTCCTTGTGCTGGTGCACTTGGACTTGGAGCTGATCAACGCAGATGTGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1
CDS CCA 72 bp GGAGAAGAGTCAGTTTCATCCTGGCCTTTTCATCACTaGGGCTGTAATGTGGAAGCTGCACATCAAAAATCC +
Preference number: 6 (lower is better)
Translates to: GEESVSSWPFHH*GCNVEAAHQKS
Trigger: GGATTTTTGATGTGCAGCTTCCACATTACAGCCCCAGTGATGAAAAGGCCAGGATGAAACTGACTCTTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244043.5
CDS TCA 72 bp CAGCCGTTTCCCATCCTTGTAAAAGTCTTTCTTCTCTaGTCCGTCAGGGTTCAGGAATCGGTTGTATTTAAA +
Preference number: 6 (lower is better)
Translates to: QPFPILVKVFLL*SVRVQESVVFK
Trigger: TTTAAATACAACCGATTCCTGAACCCTGACGGATCAGAGAAGAAAGACTTTTACAAGGATGGGAAACGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244043.5
ENST00000478971.1