RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTGIR (Homo sapiens)

Ensembl gene IDs: ENSG00000160013

Ensembl transcript IDs: ENST00000291294.7, ENST00000594275.1, ENST00000595460.1, ENST00000596260.1, ENST00000597185.1, ENST00000598865.5

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCCAGAGCCAGCAGCGACTGCCCTGCCGCAGGAGAAACAGCAGCTaGTCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGC +
Preference number: 1 (lower is better)
Translates to: SQSQQRLPCRRRNSS*SAPEFGGQGSSIRS
Trigger: GCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCCTGCGGCAGGGCAGTCGCTGCTGGCTCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR GCA 90 bp TCCTACGTCATCACCCACAATGCAGCAGCCTCCCCTTCCTCCCGTTaGCCCTTTGGGATGCCAGGGCTCCCAAGCCTGGTGGGGGACCAG +
Preference number: 1 (lower is better)
Translates to: SYVITHNAAASPSSR*PFGMPGLPSLVGDQ
Trigger: CTGGTCCCCCACCAGGCTTGGGAGCCCTGGCATCCCAAAGGGGCAACGGGAGGAAGGGGAGGCTGCTGCATTGTGGGTGATGACGTAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR CCA 90 bp ACTGCCCTGCCGCAGGAGAAACAGCAGCTGATCGGCCCCAGAGTTTaGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTG +
Preference number: 1 (lower is better)
Translates to: TALPQEKQQLIGPRV*GPRFQHPQPSAMSL
Trigger: CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCCTGCGGCAGGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR TCA 90 bp TTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTaGTTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAG +
Preference number: 1 (lower is better)
Translates to: FGGQGSSIRSHQPCP*FSGSCRPKTGQRSQ
Trigger: CTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
3UTR TCA 90 bp CTAAGTGGACGCAGATTGGAGCCAGCACCCAGACCAGAGCAGACCTaGCTGTACAGAAGCCTCTGGGAACTTCTCCGCCTTCTAAATATT +
Preference number: 1 (lower is better)
Translates to: LSGRRLEPAPRPEQT*LYRSLWELLRLLNI
Trigger: AATATTTAGAAGGCGGAGAAGTTCCCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGTGCTGGCTCCAATCTGCGTCCACTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR CAA 90 bp GACTGCCCTGCCGCAGGAGAAACAGCAGCTGATCGGCCCCAGAGTTaGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCT +
Preference number: 2 (lower is better)
Translates to: DCPAAGETAADRPQS*GAKVPASAAISHVP
Trigger: AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCCTGCGGCAGGGCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR GCA 90 bp GGACCCTGGGGACAGGCACAGGACTTAGGTTTGTGTTCTGGGGCAGTCCCTGGGAGAGCCAGCAGCGACTaGCCTGCCGCAGGAGAAACA +
Preference number: 2 (lower is better)
Translates to: GPWGQAQDLGLCSGAVPGRASSD*PAAGET
Trigger: TGTTTCTCCTGCGGCAGGGCAGTCGCTGCTGGCTCT...CCCAGGGACTGCCCCAGAACACAAACCTAAGTCCTGTGCCTGTCCCCAGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CCA 90 bp CTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCCCATCCCCTGGGGACTTaGGGTGGGCAGTTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: LFVPSTCPTSSPTMQQPPHPLGT*GGQLGL
Trigger: GAGGCCCAACTGCCCACCCCAAGTCCCCAGGGGATG...GGGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CCA 90 bp GCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTGGCTGGCTCTTGGAGTaGCTTGGTAGAGGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: ALFVPSTCPTSSPTMQQPGWLLE*LGRGGG
Trigger: CCCTCCCCCTCTACCAAGCCACTCCAAGAGCCAGCC...AGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CCA 90 bp AAGGAGGCTTTTATTTATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTGTTCTGGGGCAGTCCCTaGGATCCGCAGCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: KEAFIYSGPWGQAQDLGLFWGSP*DPQPPP
Trigger: GGGTGGGGGCTGCGGATCCCAGGGACTGCCCCAGAA...CAAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR TCA 90 bp CCAGAGCAGGTCGGCCAGGCCACTGGTTATTTTGAGAGAACCATTCTTTCTGCAAGGAGAAACAGCAGCTaGTCGGCCCCAGAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: PEQVGQATGYFERTILSARRNSS*SAPEFG
Trigger: CCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCCT...TGCAGAAAGAATGGTTCTCTCAAAATAACCAGTGGCCTGGCCGACCTGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR GCA 90 bp AAGGAGGCTTTTATTTATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTGCAGCAGCGACTGCCCTaGCGCAGGAGAAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: KEAFIYSGPWGQAQDLGLQQRLP*RRRNSS
Trigger: GCTGCTGTTTCTCCTGCGGCAGGGCAGTCGCTGCTG...CAAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CCA 90 bp GCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTGGAGCAGAAAGGGGCTaGCTCTTGGAGTGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: ALFVPSTCPTSSPTMQQPGAERG*LLEWLG
Trigger: ACCAAGCCACTCCAAGAGCCAGCCCCTTTCTGCTCC...AGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CCA 90 bp CCATTCTTTCTGCACTCCAGGATAAACGTTTCCTCTGTCCCTCACTCTCTTCCCATCGGCCCCAGAGTTTaGGGGCCAAGGTTCCAGCAT +
Preference number: 2 (lower is better)
Translates to: PFFLHSRINVSSVPHSLPIGPRV*GPRFQH
Trigger: ATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGAT...GGGAAGAGAGTGAGGGACAGAGGAAACGTTTATCCTGGAGTGCAGAAAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR TCA 90 bp GGCCAGGCCACTGGTTATTTTGAGAGAACCATTCTTTCTGCACTCCAGGATAAACATCAGCCATGTCCCTaGTTTTCTGGCTCCTGTCGC +
Preference number: 2 (lower is better)
Translates to: GQATGYFERTILSALQDKHQPCP*FSGSCR
Trigger: GCGACAGGAGCCAGAAAATCAGGGACATGGCTGATG...TTTATCCTGGAGTGCAGAAAGAATGGTTCTCTCAAAATAACCAGTGGCCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CCA 90 bp GGCCAGGCCACTGGTTATTTTGAGAGAACCATTCTTTCTGCACTCCAGGATAAAATGTCCCTGATTTTCTaGCTCCTGTCGCCCGAAGAC +
Preference number: 2 (lower is better)
Translates to: GQATGYFERTILSALQDKMSLIF*LLSPED
Trigger: GTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT...TTTATCCTGGAGTGCAGAAAGAATGGTTCTCTCAAAATAACCAGTGGCCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR TCA 72 bp CAGCAGCGACTGCCCTGCCGCAGGAGAAACAGCAGCTaGTCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGC +
Preference number: 3 (lower is better)
Translates to: QQRLPCRRRNSS*SAPEFGGQGSS
Trigger: GCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCCTGCGGCAGGGCAGTCGCTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR CCA 72 bp CCGCAGGAGAAACAGCAGCTGATCGGCCCCAGAGTTTaGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCC +
Preference number: 3 (lower is better)
Translates to: PQEKQQLIGPRV*GPRFQHPQPSA
Trigger: GGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR CCA 72 bp CCTGGGGACTTGGGGTGGGCAGTTGGGCCTCCTAAGTaGACGCAGATTGGAGCCAGCACCCAGACCAGAGCA +
Preference number: 3 (lower is better)
Translates to: PGDLGWAVGPPK*TQIGASTQTRA
Trigger: TGCTCTGGTCTGGGTGCTGGCTCCAATCTGCGTCCACTTAGGAGGCCCAACTGCCCACCCCAAGTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR CCA 72 bp ACCCTGGGGACAGGCACAGGACTTAGGTTTGTGTTCTaGGGCAGTCCCTGGGATCCGCAGCCCCCACCCTTC +
Preference number: 3 (lower is better)
Translates to: TLGTGTGLRFVF*GSPWDPQPPPF
Trigger: GAAGGGTGGGGGCTGCGGATCCCAGGGACTGCCCCAGAACACAAACCTAAGTCCTGTGCCTGTCCCCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CAA 90 bp TTAGGTTTGTGTTCTGGGGCAGTCCCTGGGATCCGCAGCCCCCACCCTTCATCTCCTCCCGTTGCCCCTTaGGGATGCCAGGGCTCCCAA +
Preference number: 3 (lower is better)
Translates to: LGLCSGAVPGIRSPHPSSPPVAP*GCQGSQ
Trigger: TTGGGAGCCCTGGCATCCCAAAGGGGCAACGGGAGG...AGATGAAGGGTGGGGGCTGCGGATCCCAGGGACTGCCCCAGAACACAAACCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR TCA 72 bp CAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTaGTTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAG +
Preference number: 3 (lower is better)
Translates to: QGSSIRSHQPCP*FSGSCRPKTGQ
Trigger: CTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
3UTR TCA 72 bp CGCAGATTGGAGCCAGCACCCAGACCAGAGCAGACCTaGCTGTACAGAAGCCTCTGGGAACTTCTCCGCCTT +
Preference number: 3 (lower is better)
Translates to: RRLEPAPRPEQT*LYRSLWELLRL
Trigger: AAGGCGGAGAAGTTCCCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGTGCTGGCTCCAATCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CAA 90 bp AGGCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCGATCGGCCCCAGAGTTaGGGGGCCAAGGTTCCAGCA +
Preference number: 3 (lower is better)
Translates to: RPFLYQAHVLRHHPQCSSDRPQS*GAKVPA
Trigger: TGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATC...GCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CAA 90 bp GTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCCCTTCCTCTAAGTGGACGCAGATaGGAGCCAGCACCCAGACCA +
Preference number: 3 (lower is better)
Translates to: VPSTCPTSSPTMQQPPLPLSGRR*EPAPRP
Trigger: TGGTCTGGGTGCTGGCTCCAATCTGCGTCCACTTAG...AGGAAGGGGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR GCA 72 bp TTGTACCAAGCACATGTCCTACGTCATCACCCACAATaGAGCAGCCTCCCCTTCCTCCCGTTGCCCCTTTGG +
Preference number: 3 (lower is better)
Translates to: LYQAHVLRHHPQ*SSLPFLPLPLW
Trigger: CCAAAGGGGCAACGGGAGGAAGGGGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR-3UTR CAA 90 bp GATTGGAGCCAGCACCCAGACCAGAGCAGACCTGACTGTACAGAAGCCTCTGGGAGGCCACTGGTTATTTaGAGAGAACCATTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: DWSQHPDQSRPDCTEASGRPLVI*REPFFL
Trigger: CAGAAAGAATGGTTCTCTCAAAATAACCAGTGGCCT...CCCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGTGCTGGCTCCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR CCA 72 bp AGGCTCTGCAAGGAGGCTTTTATTTATTCAGGACCCTaGGGACAGGCACAGGACTTAGGTTTGTGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: RLCKEAFIYSGP*GQAQDLGLCSG
Trigger: CCCAGAACACAAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTTGCAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp ATGCCAGGGCTCCCAAGCCTGGTGGGGGACCAGCGGCAAGGGAAGGCAGGGAGCGCCGTGCGCTCAGGATaGCCAGGGCCAGCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: MPGLPSLVGDQRQGKAGSAVRSG*PGPARC
Trigger: GCAACGGGCTGGCCCTGGGCATCCTGAGCGCACGGC...GCTCCCTGCCTTCCCTTGCCGCTGGTCCCCCACCAGGCTTGGGAGCCCTGGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CTTTGGGATGCCAGGGCTCCCAAGCCTGGTGGGGGACCAGCGGCAAGGGAAGGCCCGGGCTCAGGAAGCTaGTGCCCAGCAGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LWDARAPKPGGGPAAREGPGSGS*CPAGRW
Trigger: CCACCGACCTGCTGGGCACCAGCTTCCTGAGCCCGG...GCCTTCCCTTGCCGCTGGTCCCCCACCAGGCTTGGGAGCCCTGGCATCCCAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CTTTGGGATGCCAGGGCTCCCAAGCCTGGTGGGGGACCAGCGGCAAGGGAAGGCCGCAGAAGGCGTAGATaGCTGGCAGCGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LWDARAPKPGGGPAAREGRRRRR*LAAPGG
Trigger: CCCGCCTGGCGCTGCCAGCCATCTACGCCTTCTGCG...GCCTTCCCTTGCCGCTGGTCCCCCACCAGGCTTGGGAGCCCTGGCATCCCAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CTTTGGGATGCCAGGGCTCCCAAGCCTGGTGGGGGACCAGCGGCAAGGGAAGGCTTCTGGGGCAGTCCCTaGGATCCGCAGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LWDARAPKPGGGPAAREGFWGSP*DPQPPP
Trigger: GGGTGGGGGCTGCGGATCCCAGGGACTGCCCCAGAA...GCCTTCCCTTGCCGCTGGTCCCCCACCAGGCTTGGGAGCCCTGGCATCCCAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp GCAGCTGATCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCCCAGGGCCAGCCCGTTaGCCACCACACCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: AADRPQSLGAKVPASAAIPGPAR*PPHRPR
Trigger: TCGTGGCCGGTGTGGTGGGCAACGGGCTGGCCCTGG...GATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp GCAGCTGATCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCCTGCCGGGGCAGTACTaGTGGTGTTGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AADRPQSLGAKVPASAAILPGQY*WCWPRP
Trigger: GGGCCTGGGCCAACACCAGCAGTACTGCCCCGGCAG...GATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp CTCACTCTCTTCCCAGAGCCAGCAGCGACTGCCCTGCCGCAGGAGAAACAGCAGGGCAAGGGCTCCACCTaGCCCTCGCCCCAAGCCGAC +
Preference number: 4 (lower is better)
Translates to: LTLFPEPAATALPQEKQQGKGST*PSPQAD
Trigger: GTCGGCTTGGGGCGAGGGGCAGGTGGAGCCCTTGCC...CTGCTGTTTCTCCTGCGGCAGGGCAGTCGCTGCTGGCTCTGGGAAGAGAGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGGGCAAGGGCTCCACCTaGCCCTCGCCCCAAGCCGAC +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLGKGST*PSPQAD
Trigger: GTCGGCTTGGGGCGAGGGGCAGGTGGAGCCCTTGCC...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGGTCTGCGAGTCTCCGTaGGCAGGCCCGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLVCESP*AGPRHR
Trigger: CCTGTGCCTCGGGCCTGCCCACGGAGACTCGCAGAC...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGTCTGCGAGTCTCCGTaGGCAGGCCCGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PQSLGAKVPASAAISHVPVCESP*AGPRHR
Trigger: CCTGTGCCTCGGGCCTGCCCACGGAGACTCGCAGAC...AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTCCACGGCGCTGCCGCTaGACTGCTGTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PQSLGAKVPASAAISHVPPRRCR*TAVWEA
Trigger: TGCCTCCCACACAGCAGTCCAGCGGCAGCGCCGTGG...AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGGTGAAGCAGCGGATCTaGGGGCAGGGTGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLVKQRI*GQGEGV
Trigger: GACGCCCTCACCCTGCCCTCAGATCCGCTGCTTCAC...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597185.1
CDS-3UTR GCA 90 bp GAGCCAGCAGCGACTGCCCTGCCGCAGGAGAAACAGCAGCTGATCGGCCCCAGAGGCTCTCCTGTCCCGTaGGTCTGTGCCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: EPAATALPQEKQQLIGPRGSPVP*VCAFTC
Trigger: GCAAGTGAAGGCACAGACGCACGGGACAGGAGAGCC...TCTGGGGCCGATCAGCTGCTGTTTCTCCTGCGGCAGGGCAGTCGCTGCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp GATTGGAGCCAGCACCCAGACCAGAGCAGACCTGACTGTACAGAAGCCTCTGGGCCTCGTCCTCTCCGGTaGGCGGCCGTGGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: DWSQHPDQSRPDCTEASGPRPLR*AAVDPE
Trigger: CTCTGGGTCCACGGCCGCGCACCGGAGAGGACGAGG...CCCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGTGCTGGCTCCAATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGGCAAGGGCTCCACCTaGCCCTCGCCCCAAGCCGAC +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRGKGST*PSPQAD
Trigger: GTCGGCTTGGGGCGAGGGGCAGGTGGAGCCCTTGCC...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GCAGCTGATCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCCCGCCATCCCAGGTCTaGGCTCTCCAGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AADRPQSLGAKVPASAAIPPSQV*ALQSCP
Trigger: TGGGCAAGACTGGAGAGCCCAGACCTGGGATGGCGG...GATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR CAA 72 bp GCCGCAGGAGAAACAGCAGCTGATCGGCCCCAGAGTTaGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AAGETAADRPQS*GAKVPASAAIS
Trigger: GCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCCTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp GCAGCTGATCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCCCATGGCAAAGAGGATaGGCATGGACGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: AADRPQSLGAKVPASAAIPWQRG*AWTPGR
Trigger: TCGGCCTGGCGTCCATGCTCATCCTCTTTGCCATGG...GATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGCCTCGTCCTCTCCGGTaGGCGGCCGTGGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRPRPLR*AAVDPE
Trigger: CTCTGGGTCCACGGCCGCGCACCGGAGAGGACGAGG...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR GCA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGCCTCGTCCTCTCCGGTaGGCGGCCGTGGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGPRPLR*AAVDPE
Trigger: CTCTGGGTCCACGGCCGCGCACCGGAGAGGACGAGG...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTCCCCCATCTCACTGCTaGTGTCAGGGGCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: PQSLGAKVPASAAISHVPPPSHC*CQGRQP
Trigger: AGGCTGTCGCCCCTGACAGCAGCAGTGAGATGGGGG...AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGCGCTGCCGCTGGACTaGTGTGTGGGAGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRALPLD*CVGGKG
Trigger: GCCCTTGCCTCCCACACAGCAGTCCAGCGGCAGCGC...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CTCACTCTCTTCCCAGAGCCAGCAGCGACTGCCCTGCCGCAGGAGAAACAGCAGCAGCAGCGACTGCCCTaGCGCAGGAGAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LTLFPEPAATALPQEKQQQQRLP*RRRNSS
Trigger: GCTGCTGTTTCTCCTGCGGCAGGGCAGTCGCTGCTG...CTGCTGTTTCTCCTGCGGCAGGGCAGTCGCTGCTGGCTCTGGGAAGAGAGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCCCGGGGCAGTACTGCTaGTGTTGGCCCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PDFLAPVARRQGRDHRVSPGQYC*CWPRPS
Trigger: GCTGGGCCTGGGCCAACACCAGCAGTACTGCCCCGG...GCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGGCCAGCAGGATCAGGTaGTCCACCTCGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLASRIR*STSSSP
Trigger: CGGAGAGGACGAGGTGGACCACCTGATCCTGCTGGC...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGCCAGCAGGATCAGGTaGTCCACCTCGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PQSLGAKVPASAAISHVPASRIR*STSSSP
Trigger: CGGAGAGGACGAGGTGGACCACCTGATCCTGCTGGC...AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCCCACGGCGCTGCCGCTaGACTGCTGTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PDFLAPVARRQGRDHRVSPRRCR*TAVWEA
Trigger: TGCCTCCCACACAGCAGTCCAGCGGCAGCGCCGTGG...GCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGCGCTGGCTTCTGCTTTaGACGACGTTCCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLRWLLL*TTFPRR
Trigger: GCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCG...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGGGACCCAGAGAGCCCTaGTGGCGCTTCTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLGPREP*WRFSPV
Trigger: GACTGGAGAGAAGCGCCACCAGGGCTCTCTGGGTCC...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594275.1
CDS-3UTR TCA 90 bp CCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGGTCCAGGATGGGGTTaGAGGCGTAGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PQSLGAKVPASAAISHVPGPGWG*RRRSGR
Trigger: CCTTCCGCTTCTACGCCTTCAACCCCATCCTGGACC...AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTGGGTCCCTCCTCCCTaGGGCGAGCTGGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGWVPPP*GELGKG
Trigger: CCCCTTTCCCAGCTCGCCTCAGGGAGGAGGGACCCA...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGGGTCCCTCCTCCCTaGGGCGAGCTGGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAWVPPP*GELGKG
Trigger: CCCCTTTCCCAGCTCGCCTCAGGGAGGAGGGACCCA...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp GGAGAAACAGCAGCTGATCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCCCCCCATCTCACTGCTaGTGTCAGGGGCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: GETAADRPQSLGAKVPASPPSHC*CQGRQP
Trigger: AGGCTGTCGCCCCTGACAGCAGCAGTGAGATGGGGG...GGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp ACCCAGACCAGAGCAGACCTGACTGTACAGAAGCCTCTGGGAACTTCTCCGCCTGCGCTGCCGCTGGACTaGTGTGTGGGAGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: TQTRADLTVQKPLGTSPPALPLD*CVGGKG
Trigger: GCCCTTGCCTCCCACACAGCAGTCCAGCGGCAGCGC...AGGCGGAGAAGTTCCCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGCGCTGCCGCTGGACTaGTGTGTGGGAGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRALPLD*CVGGKG
Trigger: GCCCTTGCCTCCCACACAGCAGTCCAGCGGCAGCGC...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAAACATCAGGGTGCTGGTaGCCGGCCCCACCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKTSGCW*PAPPSP
Trigger: GGGGCTCGGTGGGGCCGGCCACCAGCACCCTGATGT...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGTGCCCAGCAGGTCGGTaGCCGCCAGTCCGGTCACCA +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRCPAGR*PPVRSP
Trigger: TGGTGACCGGACTGGCGGCCACCGACCTGCTGGGCA...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp ACCCAGACCAGAGCAGACCTGACTGTACAGAAGCCTCTGGGAACTTCTCCGCCTGAAGGCGTAGATGGCTaGCAGCGCCAGGCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TQTRADLTVQKPLGTSPPEGVDG*QRQAGA
Trigger: TGCGCCCGCCTGGCGCTGCCAGCCATCTACGCCTTC...AGGCGGAGAAGTTCCCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGGGACCCAGAGAGCCCTaGTGGCGCTTCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGGPREP*WRFCWR
Trigger: CCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCC...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291294.7
ENST00000598865.5
CDS-3UTR CCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAATCCGGTGCGCGGCCGTaGACCCAGAGAGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKSGARP*TQRALV
Trigger: CACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGA...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR CCA 90 bp TTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAATCCGGTGCGCGGCCGTaGACCCAGAGAGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FSGSCRPKTGQRSQGQLESGARP*TQRALV
Trigger: CACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGA...TTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTGTCTGCGAGTCTCCGTaGGCAGGCCCGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAVCESP*AGPRHR
Trigger: CCTGTGCCTCGGGCCTGCCCACGGAGACTCGCAGAC...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGCCACGGCGCTGCCGCTaGACTGCTGTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRPRRCR*TAVWEA
Trigger: TGCCTCCCACACAGCAGTCCAGCGGCAGCGCCGTGG...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GCAGCTGATCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCATCGGCCCCAGAGTTTaGGGGCCAAGGTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AADRPQSLGAKVPASAAIIGPRV*GPRFQH
Trigger: ATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGAT...GATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp ACGCAGATTGGAGCCAGCACCCAGACCAGAGCAGACCTGACTGTACAGAAGCCTGGGAGGGCCATCCCCTaGGGACTTGGGGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TQIGASTQTRADLTVQKPGRAIP*GLGVGS
Trigger: ACTGCCCACCCCAAGTCCCCAGGGGATGGCCCTCCC...AGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGTGCTGGCTCCAATCTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGAGCAGACCCAGAGCTTaGGTCGCTGGAAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLSRPRA*VAGRQP
Trigger: AGGCTGTCTTCCAGCGACTCAAGCTCTGGGTCTGCT...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp ATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATTGGGTCCCTCCTCCCTaGGGCGAGCTGGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ISHVPDFLAPVARRQGRDWVPPP*GELGKG
Trigger: CCCCTTTCCCAGCTCGCCTCAGGGAGGAGGGACCCA...ATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CTTTGGGATGCCAGGGCTCCCAAGCCTGGTGGGGGACCAGCGGCAAGGGAAGGCGTCTGTGCCTTCACTTaGTTTGCTCCTCGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LWDARAPKPGGGPAAREGVCAFT*FAPRVS
Trigger: AGAGACACGAGGAGCAAAGCAAGTGAAGGCACAGAC...GCCTTCCCTTGCCGCTGGTCCCCCACCAGGCTTGGGAGCCCTGGCATCCCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp TTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAACCACGAACATCAGGGTaGTGGTGGCCGGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: FSGSCRPKTGQRSQGQLEPRTSG*WWPAPP
Trigger: CGGTGGGGCCGGCCACCAGCACCCTGATGTTCGTGG...TTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTCCCTGGTGGCGCTTCTaGTGGCGGTACATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAPWWRF*WRYMRQ
Trigger: CTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGG...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291294.7
ENST00000598865.5
CDS-3UTR GCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGACCCCCATCTCACTGCTaGTGTCAGGGGCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRPPSHC*CQGRQP
Trigger: AGGCTGTCGCCCCTGACAGCAGCAGTGAGATGGGGG...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGGTCCCCCATCTCACTaGTGCTGTCAGGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRGPPSH*CCQGRQ
Trigger: CTGTCGCCCCTGACAGCAGCAGTGAGATGGGGGACC...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAAGCGCTGCCGCTGGACTaGTGTGTGGGAGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKALPLD*CVGGKG
Trigger: GCCCTTGCCTCCCACACAGCAGTCCAGCGGCAGCGC...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp GATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGACGTTCCCACGGCGCTaGCGCTGGACTGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: DFLAPVARRQGRDHRVSLTFPRR*RWTAVW
Trigger: CCACACAGCAGTCCAGCGGCAGCGCCGTGGGAACGT...CAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTCAGTACTGCTGGTGTTaGCCCAGGCCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAQYCWC*PRPSRG
Trigger: GCCCCTGCTGGGCCTGGGCCAACACCAGCAGTACTG...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAAGTCTGCGAGTCTCCGTaGGCAGGCCCGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKVCESP*AGPRHR
Trigger: CCTGTGCCTCGGGCCTGCCCACGGAGACTCGCAGAC...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCCTCCCTGAGGCGAGCTaGGAAAGGGGTGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PDFLAPVARRQGRDHRVSLPEAS*ERGVCE
Trigger: CTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAG...GCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAACCACGGCGCTGCCGCTaGACTGCTGTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKPRRCR*TAVWEA
Trigger: TGCCTCCCACACAGCAGTCCAGCGGCAGCGCCGTGG...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGACGCTGGCTTCTGCTTTaGACGACGTTCCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRRWLLL*TTFPRR
Trigger: GCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCG...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGGGAGCAGGCGACGCTaGCTTCTGCTTTGGACGACG +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRGSRRR*LLLWTT
Trigger: CGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCC...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GATTGGAGCCAGCACCCAGACCAGAGCAGACCTGACTGTACAGAAGCCTCTGGGCTCCCGTTGCCCCTTTaGGATGCCAGGGCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: DWSQHPDQSRPDCTEASGLPLPL*DARAPK
Trigger: CTTGGGAGCCCTGGCATCCCAAAGGGGCAACGGGAG...CCCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGTGCTGGCTCCAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
3UTR CAA 72 bp TATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTaGTGTTCTGGGGCAGTCCCTGGGATCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: YSGPWGQAQDLG*CSGAVPGIRSP
Trigger: GGGGCTGCGGATCCCAGGGACTGCCCCAGAACACAAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp AGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGCCCCGCACGTAGGTaGGGTTCCTGCACGAATCCG +
Preference number: 4 (lower is better)
Translates to: SHVPDFLAPVARRQGRDHSPARR*GSCTNP
Trigger: CGGATTCGTGCAGGAACCTCACCTACGTGCGGGGCT...GTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGTGTCCCGTGCGTCTGTaGCTTCACTTGCTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLCPVRL*LHLLCS
Trigger: GGAGCAAAGCAAGTGAAGGCACAGACGCACGGGACA...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp AGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACCCCCCATCTCACTGCTaGTGTCAGGGGCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: SHVPDFLAPVARRQGRDHPPSHC*CQGRQP
Trigger: AGGCTGTCGCCCCTGACAGCAGCAGTGAGATGGGGG...GTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGGTCCCCCATCTCACTaGTGCTGTCAGGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRGPPSH*CCQGRQ
Trigger: CTGTCGCCCCTGACAGCAGCAGTGAGATGGGGGACC...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp GATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGTGGGAAAGGGGTGTCTaGGAGTCTCCGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DFLAPVARRQGRDHRVSLWERGV*ESPWAG
Trigger: GCCTGCCCACGGAGACTCGCAGACACCCCTTTCCCA...CAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAAACGTTCCCACGGCGCTaGCGCTGGACTGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKTFPRR*RWTAVW
Trigger: CCACACAGCAGTCCAGCGGCAGCGCCGTGGGAACGT...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCGGCGACGCTGGCTTCTaGTTTGGACGACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PDFLAPVARRQGRDHRVSGDAGF*FGRRSH
Trigger: GTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCC...GCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTGCACCTCTCCAGTCTTaGCCAGGCTCTCCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAAPLQS*PGSPVP
Trigger: CGGGACAGGAGAGCCTGGGCAAGACTGGAGAGGTGC...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597185.1
CDS-3UTR CCA 90 bp TTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAACCCAGAGAGCCCTGGTaGCGCTTCTGCTGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: FSGSCRPKTGQRSQGQLEPREPW*RFCWRY
Trigger: GTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGG...TTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291294.7
ENST00000598865.5
CDS-3UTR CCA 90 bp TTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCCCTCCGGTGCGCGGCCGTaGACCCAGAGAGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FLYQAHVLRHHPQCSSLPSGARP*TQRALV
Trigger: CACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGA...GGGGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGTCAGGGGCGACAGCCTaGGTGAAGCAGCGGATCGTG +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRSGATA*VKQRIV
Trigger: CACGATCCGCTGCTTCACCCAGGCTGTCGCCCCTGA...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTCAGGGGCGACAGCCTaGGTGAAGCAGCGGATCGTG +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSASGATA*VKQRIV
Trigger: CACGATCCGCTGCTTCACCCAGGCTGTCGCCCCTGA...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR CCA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGCTCCCTGAGGCGAGCTaGGAAAGGGGTGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGLPEAS*ERGVCE
Trigger: CTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAG...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTCTCCCTGAGGCGAGCTaGGAAAGGGGTGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSALPEAS*ERGVCE
Trigger: CTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAG...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTCGCTGGCTTCTGCTTTaGACGACGTTCCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSARWLLL*TTFPRR
Trigger: GCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCG...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGGGAGCAGGCGACGCTaGCTTCTGCTTTGGACGACG +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRGSRRR*LLLWTT
Trigger: CGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCC...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGGGGAGCAGGCGACGCTaGCTTCTGCTTTGGACGACG +
Preference number: 4 (lower is better)
Translates to: DFLAPVARRQGRDHRVSLGSRRR*LLLWTT
Trigger: CGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCC...CAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GGAGAAACAGCAGCTGATCGGCCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGTTGGGCCTCCTAAGTaGACGCAGATTGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GETAADRPQSLGAKVPASVGPPK*TQIGAS
Trigger: GCTGGCTCCAATCTGCGTCCACTTAGGAGGCCCAAC...GGATGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGGCTGGCTCTTGGAGTaGCTTGGTAGAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRGWLLE*LGRGGG
Trigger: CCCTCCCCCTCTACCAAGCCACTCCAAGAGCCAGCC...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CTTTGGGATGCCAGGGCTCCCAAGCCTGGTGGGGGACCAGCGGCAAGGGAAGGCATTTATTCAGGACCCTaGGGACAGGCACAGGACTTA +
Preference number: 4 (lower is better)
Translates to: LWDARAPKPGGGPAAREGIYSGP*GQAQDL
Trigger: TAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAAT...GCCTTCCCTTGCCGCTGGTCCCCCACCAGGCTTGGGAGCCCTGGCATCCCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTGGTCCAGGATGGGGTTaGAGGCGTAGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAGPGWG*RRRSGR
Trigger: CCTTCCGCTTCTACGCCTTCAACCCCATCCTGGACC...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp CCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTATCACAGGGTCAGCTTaGAATGTCAGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PQSLGAKVPASAAISHVPITGSA*NVSRGS
Trigger: GCTCCCTCTGCTGACATTTCAAGCTGACCCTGTGAT...AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGTGCCTTCACTTGCTTTaGTCCTCGTGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLCLHLL*SSCLSL
Trigger: CAGCGAGAGACACGAGGAGCAAAGCAAGTGAAGGCA...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTGGCTCTCCTGTCCCGTaGGTCTGTGCCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAGSPVP*VCAFTC
Trigger: GCAAGTGAAGGCACAGACGCACGGGACAGGAGAGCC...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp TTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCCCGGCTCAGGAAGCTGGTaGCCAGCAGGTCGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: FLYQAHVLRHHPQCSSLPGSGSW*PAGRWP
Trigger: CGGCCACCGACCTGCTGGGCACCAGCTTCCTGAGCC...GGGGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp TTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAGGTCCCCCATCTCACTaGTGCTGTCAGGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: FSGSCRPKTGQRSQGQLEGPPSH*CCQGRQ
Trigger: CTGTCGCCCCTGACAGCAGCAGTGAGATGGGGGACC...TTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp ATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATTGGGAAAGGGGTGTCTaGGAGTCTCCGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ISHVPDFLAPVARRQGRDWERGV*ESPWAG
Trigger: GCCTGCCCACGGAGACTCGCAGACACCCCTTTCCCA...ATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp AGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACGGCGACGCTGGCTTCTaGTTTGGACGACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SHVPDFLAPVARRQGRDHGDAGF*FGRRSH
Trigger: GTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCC...GTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGGGCGACGCTGGCTTCTaGTTTGGACGACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGGDAGF*FGRRSH
Trigger: GTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCC...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGAGAGCCAGCAGCGACTaGCCTGCCGCAGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGRASSD*PAAGET
Trigger: TGTTTCTCCTGCGGCAGGGCAGTCGCTGCTGGCTCT...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAATGGTGGCGCTTCTGCTaGCGGTACATGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKWWRFC*RYMRQR
Trigger: CCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCA...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291294.7
ENST00000598865.5
CDS-3UTR CCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAAGCCAGCAGGATCAGGTaGTCCACCTCGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKASRIR*STSSSP
Trigger: CGGAGAGGACGAGGTGGACCACCTGATCCTGCTGGC...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR CCA 90 bp ATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATTCAGGGGCGACAGCCTaGGTGAAGCAGCGGATCGTG +
Preference number: 4 (lower is better)
Translates to: ISHVPDFLAPVARRQGRDSGATA*VKQRIV
Trigger: CACGATCCGCTGCTTCACCCAGGCTGTCGCCCCTGA...ATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000598865.5
CDS-3UTR CCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAACTCCCTGAGGCGAGCTaGGAAAGGGGTGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKLPEAS*ERGVCE
Trigger: CTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAG...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp ATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCGCTGGCTTCTGCTTTaGACGACGTTCCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: ISHVPDFLAPVARRQGRDRWLLL*TTFPRR
Trigger: GCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCG...ATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp ATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATGGGAGCAGGCGACGCTaGCTTCTGCTTTGGACGACG +
Preference number: 4 (lower is better)
Translates to: ISHVPDFLAPVARRQGRDGSRRR*LLLWTT
Trigger: CGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCC...ATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAAAAGGGGCTGGCTCTTaGAGTGGCTTGGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRKGAGS*SGLVEG
Trigger: CCCCTCTACCAAGCCACTCCAAGAGCCAGCCCCTTT...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp AGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACCCCAGAGAGCCCTGGTaGCGCTTCTCTCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SHVPDFLAPVARRQGRDHPREPW*RFSPVL
Trigger: CAAGACTGGAGAGAAGCGCCACCAGGGCTCTCTGGG...GTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594275.1
CDS-3UTR TCA 90 bp GTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCCCTTCCTGGTCCAGGATGGGGTTaGAGGCGTAGAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPSTCPTSSPTMQQPPLPGPGWG*RRRSGR
Trigger: CCTTCCGCTTCTACGCCTTCAACCCCATCCTGGACC...AGGAAGGGGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGAGCAGACCCAGAGCTTaGGTCGCTGGAAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRSRPRA*VAGRQP
Trigger: AGGCTGTCTTCCAGCGACTCAAGCTCTGGGTCTGCT...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGAGCAGACCCAGAGCTTaGGTCGCTGGAAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGSRPRA*VAGRQP
Trigger: AGGCTGTCTTCCAGCGACTCAAGCTCTGGGTCTGCT...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp ACCCTGGGGACAGGCACAGGACTTAGGTTTGTGTTCTGGGGCAGTCCCTGGGATCATCAGCCATGTCCCTaGTTTTCTGGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: TLGTGTGLRFVFWGSPWDHQPCP*FSGSCR
Trigger: GCGACAGGAGCCAGAAAATCAGGGACATGGCTGATG...ATCCCAGGGACTGCCCCAGAACACAAACCTAAGTCCTGTGCCTGTCCCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGATGTCCCGTGCGTCTGTaGCTTCACTTGCTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRCPVRL*LHLLCS
Trigger: GGAGCAAAGCAAGTGAAGGCACAGACGCACGGGACA...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp ATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATGGCTCTCCTGTCCCGTaGGTCTGTGCCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: ISHVPDFLAPVARRQGRDGSPVP*VCAFTC
Trigger: GCAAGTGAAGGCACAGACGCACGGGACAGGAGAGCC...ATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAAGGCTCTCCTGTCCCGTaGGTCTGTGCCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKGSPVP*VCAFTC
Trigger: GCAAGTGAAGGCACAGACGCACGGGACAGGAGAGCC...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAACCAGCAGGGAGCTGTTaGGCGCATAGGCCACGAACA +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKPAGSC*AHRPRT
Trigger: TGTTCGTGGCCTATGCGCGCAACAGCTCCCTGCTGG...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp CAGCGGCAAGGGAAGGCAGGGAGCTTTTCCAATAACTGTGGTTTTTGTGGAGCACCCTGGTGGCGCTTCTaGTGGCGGTACATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QRQGKAGSFSNNCGFCGAPWWRF*WRYMRQ
Trigger: CTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGG...TGCTCCACAAAAACCACAGTTATTGGAAAAGCTCCCTGCCTTCCCTTGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp TCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTGTGTTCTGGGGCAGTCCCTCCCCCACCCTTCATCTaGCAGCTTCTCCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: SGPWGQAQDLGLCSGAVPPPPFI*QLLHLS
Trigger: AGACAGATGGAGAAGCTGGCAGATGAAGGGTGGGGG...AGGGACTGCCCCAGAACACAAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAATCTGCTGGCGGTACATaGGGCAGAGGCTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKSAGGT*GRGSPV
Trigger: GACTGGAGAGCCTCTGCCGCATGTACCGCCAGCAGA...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598865.5
CDS-3UTR CCA 90 bp TCCAATAACTGTGGTTTTTGTGGAGCAGAAAGGGGCTGGCTCTTGGAGTGGCTTGGACCCAGAGAGCCCTaGTGGCGCTTCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SNNCGFCGAERGWLLEWLGPREP*WRFCWR
Trigger: CCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCC...AAGCCACTCCAAGAGCCAGCCCCTTTCTGCTCCACAAAAACCACAGTTATTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAAAGCAGACCCAGAGCTTaGGTCGCTGGAAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKSRPRA*VAGRQP
Trigger: AGGCTGTCTTCCAGCGACTCAAGCTCTGGGTCTGCT...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp AAGGAGGCTTTTATTTATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTGTGGGTCCCTCCTCCCTaGGGCGAGCTGGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KEAFIYSGPWGQAQDLGLWVPPP*GELGKG
Trigger: CCCCTTTCCCAGCTCGCCTCAGGGAGGAGGGACCCA...CAAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTCATCAGCCATGTCCCTaGTTTTCTGGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAHQPCP*FSGSCR
Trigger: GCGACAGGAGCCAGAAAATCAGGGACATGGCTGATG...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp AGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACCATCAGCCATGTCCCTaGTTTTCTGGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: SHVPDFLAPVARRQGRDHHQPCP*FSGSCR
Trigger: GCGACAGGAGCCAGAAAATCAGGGACATGGCTGATG...GTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGTCCCGTGCGTCTGTaGCTTCACTTGCTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSACPVRL*LHLLCS
Trigger: GGAGCAAAGCAAGTGAAGGCACAGACGCACGGGACA...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp TCCAATAACTGTGGTTTTTGTGGAGCAGAAAGGGGCTGGCTCTTGGAGTGGCTTACGTTCCCACGGCGCTaGCGCTGGACTGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SNNCGFCGAERGWLLEWLTFPRR*RWTAVW
Trigger: CCACACAGCAGTCCAGCGGCAGCGCCGTGGGAACGT...AAGCCACTCCAAGAGCCAGCCCCTTTCTGCTCCACAAAAACCACAGTTATTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGACAGAGCTTGAGTCGCTaGAAGACAGCCTTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRQSLSR*KTALRK
Trigger: TTTCCGCAAGGCTGTCTTCCAGCGACTCAAGCTCTG...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAATGTCCCTGATTTTCTaGCTCCTGTCGCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRMSLIF*LLSPED
Trigger: GTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CAAGGAGGCTTTTATTTATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTCAGGGCTCCCAAGCCTaGTGGGGGACCAGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: QGGFYLFRTLGTGTGLRFQGSQA*WGTSGK
Trigger: CTTGCCGCTGGTCCCCCACCAGGCTTGGGAGCCCTG...AAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGATCACAGGGTCAGCTTaGAATGTCAGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRITGSA*NVSRGS
Trigger: GCTCCCTCTGCTGACATTTCAAGCTGACCCTGTGAT...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp TTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAACATCAGCCATGTCCCTaGTTTTCTGGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: FSGSCRPKTGQRSQGQLEHQPCP*FSGSCR
Trigger: GCGACAGGAGCCAGAAAATCAGGGACATGGCTGATG...TTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp TTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAAGACCAGAGCAGACCTaGCTGTACAGAAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSGSCRPKTGQRSQGQLERPEQT*LYRSLW
Trigger: CCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCT...TTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTCTTGCTTACCAGGGATaGGGTAGGGGTGACATGTCA +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSALAYQG*GRGDMS
Trigger: TGACATGTCACCCCTACCTCATCCCTGGTAAGCAAG...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597185.1
CDS-3UTR GCA 90 bp GATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGTGCCTTCACTTGCTTTaGTCCTCGTGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DFLAPVARRQGRDHRVSLCLHLL*SSCLSL
Trigger: CAGCGAGAGACACGAGGAGCAAAGCAAGTGAAGGCA...CAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTGCCTTCACTTGCTTTaGTCCTCGTGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGCLHLL*SSCLSL
Trigger: CAGCGAGAGACACGAGGAGCAAAGCAAGTGAAGGCA...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp CCATTCTTTCTGCACTCCAGGATAAACGTTTCCTCTGTCCCTCACTCTCTTCCCGGTCCCCCATCTCACTaGTGCTGTCAGGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PFFLHSRINVSSVPHSLPGPPSH*CCQGRQ
Trigger: CTGTCGCCCCTGACAGCAGCAGTGAGATGGGGGACC...GGGAAGAGAGTGAGGGACAGAGGAAACGTTTATCCTGGAGTGCAGAAAGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp TCCAATAACTGTGGTTTTTGTGGAGCAGAAAGGGGCTGGCTCTTGGAGTGGCTTGTTGCCCCTTTGGGATaGCAGGGCTCCCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SNNCGFCGAERGWLLEWLVAPLG*QGSQAW
Trigger: CCAGGCTTGGGAGCCCTGGCATCCCAAAGGGGCAAC...AAGCCACTCCAAGAGCCAGCCCCTTTCTGCTCCACAAAAACCACAGTTATTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTCAGAGCTTGAGTCGCTaGAAGACAGCCTTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: LIFWLLSPEDRAEITGSAQSLSR*KTALRK
Trigger: TTTCCGCAAGGCTGTCTTCCAGCGACTCAAGCTCTG...AGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGATGTCCCTGATTTTCTaGCTCCTGTCGCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRMSLIF*LLSPED
Trigger: GTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp GGCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCGGAGCAGAAAGGGGCTaGCTCTTGGAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GPFCTKHMSYVITHNAAAGAERG*LLEWLG
Trigger: ACCAAGCCACTCCAAGAGCCAGCCCCTTTCTGCTCC...GGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGCCAGTCAAGCTAGGTaGAATGTCTCAGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: AISHVPDFLAPVARRQGRASQAR*NVSGPF
Trigger: AAAAGGGCCTGAGACATTCCACCTAGCTTGACTGGC...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR TCA 90 bp ATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATATCACAGGGTCAGCTTaGAATGTCAGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ISHVPDFLAPVARRQGRDITGSA*NVSRGS
Trigger: GCTCCCTCTGCTGACATTTCAAGCTGACCCTGTGAT...ATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR TCA 90 bp GCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTAGGAGAAACAGCAGCTaGTCGGCCCCAGAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ALFVPSTCPTSSPTMQQPRRNSS*SAPEFG
Trigger: CCCAAACTCTGGGGCCGATCAGCTGCTGTTTCTCCT...AGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp TCGGCCAGGCCACTGGTTATTTTGAGAGAACCATTCTTTCTGCACTCCAGGATATGGTGGCGCTTCTGCTaGCGGTACATGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SARPLVILREPFFLHSRIWWRFC*RYMRQR
Trigger: CCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCA...TATCCTGGAGTGCAGAAAGAATGGTTCTCTCAAAATAACCAGTGGCCTGGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp TTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAACAGAGCTTGAGTCGCTaGAAGACAGCCTTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: FSGSCRPKTGQRSQGQLEQSLSR*KTALRK
Trigger: TTTCCGCAAGGCTGTCTTCCAGCGACTCAAGCTCTG...TTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CCA 90 bp ATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATATGTCCCTGATTTTCTaGCTCCTGTCGCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: ISHVPDFLAPVARRQGRDMSLIF*LLSPED
Trigger: GTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT...ATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR GCA 90 bp TCGGCCAGGCCACTGGTTATTTTGAGAGAACCATTCTTTCTGCACTCCAGGATAGGCGACGCTGGCTTCTaGTTTGGACGACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SARPLVILREPFFLHSRIGDAGF*FGRRSH
Trigger: GTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCC...TATCCTGGAGTGCAGAAAGAATGGTTCTCTCAAAATAACCAGTGGCCTGGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp TCCAATAACTGTGGTTTTTGTGGAGCAGAAAGGGGCTGGCTCTTGGAGTGGCTTCGTCATCACCCACAATaGAGCAGCCTCCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SNNCGFCGAERGWLLEWLRHHPQ*SSLPFL
Trigger: GAGGAAGGGGAGGCTGCTGCATTGTGGGTGATGACG...AAGCCACTCCAAGAGCCAGCCCCTTTCTGCTCCACAAAAACCACAGTTATTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp GATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAATGTATCTGCTCCTaGTCTGTGTTGCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: DFLAPVARRQGRDHRVSLKCICS*SVLLHP
Trigger: GGGATGCAGCAACACAGAGCAGGAGCAGATACATTT...CAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597185.1
CDS-3UTR CCA 90 bp AGGCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTTAGGTTTGTGTTCTaGGGCAGTCCCTGGGATCCG +
Preference number: 4 (lower is better)
Translates to: RPFLYQAHVLRHHPQCSSLRFVF*GSPWDP
Trigger: CGGATCCCAGGGACTGCCCCAGAACACAAACCTAAG...GCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp AGGCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCTGCCTTCACTTGCTTTaGTCCTCGTGTCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RPFLYQAHVLRHHPQCSSCLHLL*SSCLSL
Trigger: CAGCGAGAGACACGAGGAGCAAAGCAAGTGAAGGCA...GCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCATGTCCCTGATTTTCTaGCTCCTGTCGCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: PFCTKHMSYVITHNAAASMSLIF*LLSPED
Trigger: GTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT...GGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR GCA 90 bp AGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGTAACAAATGTATCTaGTCCTGCTCTGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SHVPDFLAPVARRQGRDHSNKCI*SCSVLL
Trigger: CAGCAACACAGAGCAGGAGCAGATACATTTGTTACT...GTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597185.1
CDS-3UTR TCA 90 bp CAAGGAGGCTTTTATTTATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTATCACAGGGTCAGCTTaGAATGTCAGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QGGFYLFRTLGTGTGLRFITGSA*NVSRGS
Trigger: GCTCCCTCTGCTGACATTTCAAGCTGACCCTGTGAT...AAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CCA 90 bp CAAGGAGGCTTTTATTTATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTCAGAGCTTGAGTCGCTaGAAGACAGCCTTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: QGGFYLFRTLGTGTGLRFQSLSR*KTALRK
Trigger: TTTCCGCAAGGCTGTCTTCCAGCGACTCAAGCTCTG...AAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS GCA 90 bp TCCGGTCACCAGCACCGCGAAGGCCGAGGGGCGCGCCGGTCGCCGTaGGCTCAGGATGCCCAGGGCCAGCCCGTTGCCCACCACACCGGC +
Preference number: 5 (lower is better)
Translates to: SGHQHREGRGARRSP*AQDAQGQPVAHHTG
Trigger: GCCGGTGTGGTGGGCAACGGGCTGGCCCTGGGCATCCTGAGCGCACGGCGACCGGCGCGCCCCTCGGCCTTCGCGGTGCTGGTGACCGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS GCA 90 bp GCACCGCGAAGGCCGAGGGGCGCGCCGGTCGCCGTGCGCTCAGGATaGCCAGGGCCAGCCCGTTGCCCACCACACCGGCCACGAACATCA +
Preference number: 5 (lower is better)
Translates to: APRRPRGAPVAVRSG*PGPARCPPHRPRTS
Trigger: TGATGTTCGTGGCCGGTGTGGTGGGCAACGGGCTGGCCCTGGGCATCCTGAGCGCACGGCGACCGGCGCGCCCCTCGGCCTTCGCGGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS GCA 90 bp CGCACAGGGCGGGGCCGCCTCGGGCCAGGCCCAGCAGGGAGCTGTTaGGCGCATAGGCCACGAACACGGCCGGGCTCAGGAAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RTGRGRLGPGPAGSC*AHRPRTRPGSGSWC
Trigger: GCACCAGCTTCCTGAGCCCGGCCGTGTTCGTGGCCTATGCGCGCAACAGCTCCCTGCTGGGCCTGGCCCGAGGCGGCCCCGCCCTGTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 90 bp CAGCAGGGGCAGCGCGCAGAAGAGGACGCAGAAGGCGTAGATGGCTaGCAGCGCCAGGCGGGCGCAGCGGGGCCCGTCCAGCTGCGCGTA +
Preference number: 5 (lower is better)
Translates to: QQGQRAEEDAEGVDG*QRQAGAAGPVQLRV
Trigger: TACGCGCAGCTGGACGGGCCCCGCTGCGCCCGCCTGGCGCTGCCAGCCATCTACGCCTTCTGCGTCCTCTTCTGCGCGCTGCCCCTGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 90 bp CCGGTGCGCGGCCGTGGACCCAGAGAGCCCTGGTGGCGCTTCTGCTaGCGGTACATGCGGCAGAGGCTGAGGGTGACCGAGCCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: PVRGRGPREPWWRFC*RYMRQRLRVTEPLQ
Trigger: CTGCAACGGCTCGGTCACCCTCAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS GCA 90 bp TCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTGGTGGCGCTTCTaGTGGCGGTACATGCGGCAGAGGCTGAGGGTGACCGAGCCGTTG +
Preference number: 5 (lower is better)
Translates to: SPVRGRGPREPWWRF*WRYMRQRLRVTEPL
Trigger: CAACGGCTCGGTCACCCTCAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS GCA 90 bp GCCCTTGGGTCCCTCCTCCCTGAGGCGAGCTGGGAAAGGGGTGTCTaGGAGTCTCCGTGGGCAGGCCCGAGGCACAGGCAGCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: ALGSLLPEASWERGV*ESPWAGPRHRQQTQ
Trigger: CTGGGTCTGCTGCCTGTGCCTCGGGCCTGCCCACGGAGACTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAGGAGGGACCCAAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CCA 90 bp ACCTCGTCCTCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTGGTaGCGCTTCTGCTGGCGGTACATGCGGCAGAGGCTGAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: TSSSPVRGRGPREPW*RFCWRYMRQRLRVT
Trigger: GGTCACCCTCAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGAGGACGAGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 90 bp TCCACCTCGTCCTCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTaGTGGCGCTTCTGCTGGCGGTACATGCGGCAGAGGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: STSSSPVRGRGPREP*WRFCWRYMRQRLRV
Trigger: CACCCTCAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGAGGACGAGGTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 90 bp ACAGGAGCAGAGGGGGCCCTTGGGTCCCTCCTCCCTGAGGCGAGCTaGGAAAGGGGTGTCTGCGAGTCTCCGTGGGCAGGCCCGAGGCAC +
Preference number: 5 (lower is better)
Translates to: TGAEGALGSLLPEAS*ERGVCESPWAGPRH
Trigger: GTGCCTCGGGCCTGCCCACGGAGACTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAGGAGGGACCCAAGGGCCCCCTCTGCTCCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CCA 90 bp CCGGTGCGCGGCCGTGGACCCAGAGAGCCCTGGTGGCGCTTCTGCTaGCGGTACATGCGGCAGAGGCTCTCCAGTCTTGCCCAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PVRGRGPREPWWRFC*RYMRQRLSSLAQAL
Trigger: GAGAGCCTGGGCAAGACTGGAGAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598865.5
CDS TCA 90 bp ACATCAGGGTGCTGGTGGCCGGCCCCACCGAGCCCCGCACGTAGGTaGGGTTCCTGCACGAATCCGCCATCCCAGGTCTGGGCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: TSGCWWPAPPSPARR*GSCTNPPSQVWAGG
Trigger: CCCTCCAGCCCAGACCTGGGATGGCGGATTCGTGCAGGAACCTCACCTACGTGCGGGGCTCGGTGGGGCCGGCCACCAGCACCCTGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595460.1
CDS GCA 90 bp ACGGCGCTGCCGCTGGACTGCTGTGTGGGAGGCAAGGGCTCCACCTaGCCCTCGCCCCAAGCCGACAAAGGCACGCAGCTCCCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: TALPLDCCVGGKGST*PSPQADKGTQLPSF
Trigger: AAAGGAGGGGAGCTGCGTGCCTTTGTCGGCTTGGGGCGAGGGGCAGGTGGAGCCCTTGCCTCCCACACAGCAGTCCAGCGGCAGCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS GCA 90 bp CTGGCTTCTGCTTTGGACGACGTTCCCACGGCGCTGCCGCTGGACTaGTGTGTGGGAGGCAAGGGCTCCACCTGCCCCTCGCCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LASALDDVPTALPLD*CVGGKGSTCPSPQA
Trigger: GGCTTGGGGCGAGGGGCAGGTGGAGCCCTTGCCTCCCACACAGCAGTCCAGCGGCAGCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS GCA 90 bp TCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTGGTGGCGCTTCTaGTGGCGGTACATGCGGCAGAGGCTCTCCAGTCTTGCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SPVRGRGPREPWWRF*WRYMRQRLSSLAQA
Trigger: AGCCTGGGCAAGACTGGAGAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598865.5
CDS CCA 90 bp TCCACCTCGTCCTCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTaGTGGCGCTTCTGCTGGCGGTACATGCGGCAGAGGCTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: STSSSPVRGRGPREP*WRFCWRYMRQRLSS
Trigger: ACTGGAGAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGAGGACGAGGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598865.5
CDS-3UTR CAA 90 bp GGACCCTGGGGACAGGCACAGGACTTAGGTTTGTGTTCTGGGGCAGTCCCTGGGCCCAGGGCCAGCCCGTaGCCCACCACACCGGCCACG +
Preference number: 5 (lower is better)
Translates to: GPWGQAQDLGLCSGAVPGPRASP*PTTPAT
Trigger: CGTGGCCGGTGTGGTGGGCAACGGGCTGGCCCTGGG...CCCAGGGACTGCCCCAGAACACAAACCTAAGTCCTGTGCCTGTCCCCAGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS TCA 90 bp ACATCAGGGTGCTGGTGGCCGGCCCCACCGAGCCCCGCACGTAGGTaGGGTTCCTGCACGAATCCGCCATCCCAGGTCTGGGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: TSGCWWPAPPSPARR*GSCTNPPSQVWALQ
Trigger: CTGGAGAGCCCAGACCTGGGATGGCGGATTCGTGCAGGAACCTCACCTACGTGCGGGGCTCGGTGGGGCCGGCCACCAGCACCCTGATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291294.7
ENST00000596260.1
CDS TCA 90 bp CTCCTTTCCCACAGGAGCAGAGGGGGCCCTTGGGTCCCTCCTCCCTaGGGCGAGCTGGGAAAGGGGTGTCTGCGAGTCTCCGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLSHRSRGGPWVPPP*GELGKGCLRVSVGR
Trigger: CCTGCCCACGGAGACTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAGGAGGGACCCAAGGGCCCCCTCTGCTCCTGTGGGAAAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CCA 90 bp CTCCTCCCTGAGGCGAGCTGGGAAAGGGGTGTCTGCGAGTCTCCGTaGGCAGGCCCGAGGCACAGGCAGCAGACCCAGAGCTTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: LLPEASWERGVCESP*AGPRHRQQTQSLSR
Trigger: GCGACTCAAGCTCTGGGTCTGCTGCCTGTGCCTCGGGCCTGCCCACGGAGACTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CCA 90 bp CTGCTTTGGACGACGTTCCCACGGCGCTGCCGCTGGACTGCTGTGTaGGAGGCAAGGGCTCCACCTGCCCCTCGCCCCAAGCCGACAAAG +
Preference number: 5 (lower is better)
Translates to: LLWTTFPRRCRWTAV*EARAPPAPRPKPTK
Trigger: CTTTGTCGGCTTGGGGCGAGGGGCAGGTGGAGCCCTTGCCTCCCACACAGCAGTCCAGCGGCAGCGCCGTGGGAACGTCGTCCAAAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CCA 90 bp ACCTCGTCCTCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTGGTaGCGCTTCTGCTGGCGGTACATGCGGCAGAGGCTCTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: TSSSPVRGRGPREPW*RFCWRYMRQRLSSL
Trigger: AAGACTGGAGAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGAGGACGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598865.5
CDS TCA 90 bp TCACTGCTGCTGTCAGGGGCGACAGCCTGGGTGAAGCAGCGGATCTaGGGGCAGGGTGAGGGCGTCAAGGAGCACCCAGGAGTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SLLLSGATAWVKQRI*GQGEGVKEHPGVLS
Trigger: GCTGAGGACTCCTGGGTGCTCCTTGACGCCCTCACCCTGCCCTCAGATCCGCTGCTTCACCCAGGCTGTCGCCCCTGACAGCAGCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597185.1
CDS CCA 90 bp ACCCAGCCCACTCAGATGTCCCTGCTGGCCAGTCCTTTTGGCAGCTaGGGCCTCCCAGCCAACCCCCAGTTCTCCTGTGTGTGCGGGTAT +
Preference number: 5 (lower is better)
Translates to: TQPTQMSLLASPFGS*GLPANPQFSCVCGY
Trigger: ATACCCGCACACACAGGAGAACTGGGGGTTGGCTGGGAGGCCCCAGCTGCCAAAAGGACTGGCCAGCAGGGACATCTGAGTGGGCTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595460.1
CDS-3UTR CAA 90 bp CTTTGGGATGCCAGGGCTCCCAAGCCTGGTGGGGGACCAGCGGCAAGGGAAGGCCGCTGGAAGACAGCCTaGCGGAAAAGGATGAAGACC +
Preference number: 5 (lower is better)
Translates to: LWDARAPKPGGGPAAREGRWKTA*RKRMKT
Trigger: GGTCTTCATCCTTTTCCGCAAGGCTGTCTTCCAGCG...GCCTTCCCTTGCCGCTGGTCCCCCACCAGGCTTGGGAGCCCTGGCATCCCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp CCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTACGCTGGCTTCTGCTTaGGACGACGTTCCCACGGCG +
Preference number: 5 (lower is better)
Translates to: PQSLGAKVPASAAISHVPTLASA*DDVPTA
Trigger: CGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGT...AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS GCA 90 bp GGTCAGCTTGAAATGTCAGCAGAGGGAGCAGGCGACGCTGGCTTCTaGTTTGGACGACGTTCCCACGGCGCTGCCGCTGGACTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: GQLEMSAEGAGDAGF*FGRRSHGAAAGLLC
Trigger: ACACAGCAGTCCAGCGGCAGCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCCTCTGCTGACATTTCAAGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp GCCATCAGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAAGGGTGACCGAGCCGTaGCAGAGGAAGATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: AISHVPDFLAPVARRQGRRVTEP*QRKMAA
Trigger: GGCTGCCATCTTCCTCTGCAACGGCTCGGTCACCCT...TCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCTGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp GATTGGAGCCAGCACCCAGACCAGAGCAGACCTGACTGTACAGAAGCCTCTGGGACGCTGGCTTCTGCTTaGGACGACGTTCCCACGGCG +
Preference number: 5 (lower is better)
Translates to: DWSQHPDQSRPDCTEASGTLASA*DDVPTA
Trigger: CGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGT...CCCAGAGGCTTCTGTACAGTCAGGTCTGCTCTGGTCTGGGTGCTGGCTCCAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS TCA 90 bp TGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTaGAATGTCAGCAGAGGGAGCAGGCGACGCTGGCTTCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: WLLSPEDRAEITGSA*NVSRGSRRRWLLLW
Trigger: CCAAAGCAGAAGCCAGCGTCGCCTGCTCCCTCTGCTGACATTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp CCCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTCGTCTGTGCCTTCACTaGCTTTGCTCCTCGTGTCTC +
Preference number: 5 (lower is better)
Translates to: PQSLGAKVPASAAISHVPRLCLH*LCSSCL
Trigger: GAGACACGAGGAGCAAAGCAAGTGAAGGCACAGACG...AGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp AGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACACGCTGGCTTCTGCTTaGGACGACGTTCCCACGGCG +
Preference number: 5 (lower is better)
Translates to: SHVPDFLAPVARRQGRDHTLASA*DDVPTA
Trigger: CGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGT...GTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGACGCTGGCTTCTGCTTaGGACGACGTTCCCACGGCG +
Preference number: 5 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRTLASA*DDVPTA
Trigger: CGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGT...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp TTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAACCTCCCGTTGCCCCTTaGGGATGCCAGGGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: FLAPVARRQGRDHRVSLKPPVAP*GCQGSQ
Trigger: TTGGGAGCCCTGGCATCCCAAAGGGGCAACGGGAGG...TTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp CCCAGAGTTTGGGGGCCAAGGTTCCAGCATCCGCAGCCATCAGCCATGTCCCTGGATCACAGGGTCAGCTaGAAATGTCAGCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PRVWGPRFQHPQPSAMSLDHRVS*KCQQRE
Trigger: CTCCCTCTGCTGACATTTCAAGCTGACCCTGTGATC...CAGGGACATGGCTGATGGCTGCGGATGCTGGAACCTTGGCCCCCAAACTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp ATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGCGTCTGTGCCTTCACTaGCTTTGCTCCTCGTGTCTC +
Preference number: 5 (lower is better)
Translates to: MSLIFWLLSPEDRAEITGRLCLH*LCSSCL
Trigger: GAGACACGAGGAGCAAAGCAAGTGAAGGCACAGACG...CCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp CTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCCGATCGGCCCCAGAGTTaGGGGGCCAAGGTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LFVPSTCPTSSPTMQQPPDRPQS*GAKVPA
Trigger: TGCTGGAACCTTGGCCCCCAAACTCTGGGGCCGATC...GGGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp CTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCCACTTGGGGTGGGCAGTaGGGCCTCCTAAGTGGACGC +
Preference number: 5 (lower is better)
Translates to: LFVPSTCPTSSPTMQQPPTWGGQ*GLLSGR
Trigger: GCGTCCACTTAGGAGGCCCAACTGCCCACCCCAAGT...GGGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp AGGCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCGGCTCTTGGAGTGGCTaGGTAGAGGGGGAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: RPFLYQAHVLRHHPQCSSGSWSG*VEGEGH
Trigger: ATGGCCCTCCCCCTCTACCAAGCCACTCCAAGAGCC...GCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp AGCCATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACCCCCCAGTTCTCATCTaGCAGCCAGTCAAGCTAGGT +
Preference number: 5 (lower is better)
Translates to: SHVPDFLAPVARRQGRDHPPVLI*QPVKLG
Trigger: ACCTAGCTTGACTGGCTGCAAGATGAGAACTGGGGG...GTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATGGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp GATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGGCACAGGACTTAGGTTaGTGTTCTGGGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: DFLAPVARRQGRDHRVSLAQDLG*CSGAVP
Trigger: AGGGACTGCCCCAGAACACAAACCTAAGTCCTGTGC...CAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp CATGTCCCTGATTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGATCACAGGGTCAGCTaGAAATGTCAGCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: HVPDFLAPVARRQGRDHRDHRVS*KCQQRE
Trigger: CTCCCTCTGCTGACATTTCAAGCTGACCCTGTGATC...CCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAATCAGGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp CAGCGGCAAGGGAAGGCAGGGAGCTTTTCCAATAACTGTGGTTTTTGTGGAGCAGAAAGGGGCTGGCTCTaGGAGTGGCTTGGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: QRQGKAGSFSNNCGFCGAERGWL*EWLGRG
Trigger: CCCTCTACCAAGCCACTCCAAGAGCCAGCCCCTTTC...TGCTCCACAAAAACCACAGTTATTGGAAAAGCTCCCTGCCTTCCCTTGCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp TTTTCTGGCTCCTGTCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTGAAGATCACAGGGTCAGCTaGAAATGTCAGCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: FSGSCRPKTGQRSQGQLEDHRVS*KCQQRE
Trigger: CTCCCTCTGCTGACATTTCAAGCTGACCCTGTGATC...TTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGACAGGAGCCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS-3UTR CAA 90 bp CCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTCCCTAAGTGGACGCAGATaGGAGCCAGCACCCAGACCA +
Preference number: 5 (lower is better)
Translates to: PFCTKHMSYVITHNAAASLSGRR*EPAPRP
Trigger: TGGTCTGGGTGCTGGCTCCAATCTGCGTCCACTTAG...GGAGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp GCCCTTTTTGTACCAAGCACATGTCCTACGTCATCACCCACAATGCAGCAGCCTGATCACAGGGTCAGCTaGAAATGTCAGCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: ALFVPSTCPTSSPTMQQPDHRVS*KCQQRE
Trigger: CTCCCTCTGCTGACATTTCAAGCTGACCCTGTGATC...AGGCTGCTGCATTGTGGGTGATGACGTAGGACATGTGCTTGGTACAAAAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp CAAGGAGGCTTTTATTTATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTTGTCTCAGGCCCTTTTaGTACCAAGCACATGTCCTA +
Preference number: 5 (lower is better)
Translates to: QGGFYLFRTLGTGTGLRFCLRPF*YQAHVL
Trigger: TAGGACATGTGCTTGGTACAAAAAGGGCCTGAGACA...AAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS-3UTR CAA 90 bp CAAGGAGGCTTTTATTTATTCAGGACCCTGGGGACAGGCACAGGACTTAGGTTTAGGCCACTGGTTATTTaGAGAGAACCATTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: QGGFYLFRTLGTGTGLRFRPLVI*REPFFL
Trigger: CAGAAAGAATGGTTCTCTCAAAATAACCAGTGGCCT...AAACCTAAGTCCTGTGCCTGTCCCCAGGGTCCTGAATAAATAAAAGCCTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS GCA 72 bp AGGCCGAGGGGCGCGCCGGTCGCCGTGCGCTCAGGATaGCCAGGGCCAGCCCGTTGCCCACCACACCGGCCA +
Preference number: 6 (lower is better)
Translates to: RPRGAPVAVRSG*PGPARCPPHRP
Trigger: TGGCCGGTGTGGTGGGCAACGGGCTGGCCCTGGGCATCCTGAGCGCACGGCGACCGGCGCGCCCCTCGGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CAA 90 bp GGGCGCGCCGGTCGCCGTGCGCTCAGGATGCCCAGGGCCAGCCCGTaGCCCACCACACCGGCCACGAACATCAGGGTGCTGGTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: GRAGRRALRMPRASP*PTTPATNIRVLVAG
Trigger: GCCGGCCACCAGCACCCTGATGTTCGTGGCCGGTGTGGTGGGCAACGGGCTGGCCCTGGGCATCCTGAGCGCACGGCGACCGGCGCGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS GCA 72 bp CGGGGCCGCCTCGGGCCAGGCCCAGCAGGGAGCTGTTaGGCGCATAGGCCACGAACACGGCCGGGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: RGRLGPGPAGSC*AHRPRTRPGSG
Trigger: TCCTGAGCCCGGCCGTGTTCGTGGCCTATGCGCGCAACAGCTCCCTGCTGGGCCTGGCCCGAGGCGGCCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 72 bp CAGCGCGCAGAAGAGGACGCAGAAGGCGTAGATGGCTaGCAGCGCCAGGCGGGCGCAGCGGGGCCCGTCCAG +
Preference number: 6 (lower is better)
Translates to: QRAEEDAEGVDG*QRQAGAAGPVQ
Trigger: CTGGACGGGCCCCGCTGCGCCCGCCTGGCGCTGCCAGCCATCTACGCCTTCTGCGTCCTCTTCTGCGCGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS GCA 72 bp CGCGGCCGTGGACCCAGAGAGCCCTGGTGGCGCTTCTaGTGGCGGTACATGCGGCAGAGGCTGAGGGTGACC +
Preference number: 6 (lower is better)
Translates to: RGRGPREPWWRF*WRYMRQRLRVT
Trigger: GGTCACCCTCAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 72 bp GCGCATAGGCCACGAACACGGCCGGGCTCAGGAAGCTaGTGCCCAGCAGGTCGGTGGCCGCCAGTCCGGTCA +
Preference number: 6 (lower is better)
Translates to: AHRPRTRPGSGS*CPAGRWPPVRS
Trigger: TGACCGGACTGGCGGCCACCGACCTGCTGGGCACCAGCTTCCTGAGCCCGGCCGTGTTCGTGGCCTATGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 72 bp TCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTGGTaGCGCTTCTGCTGGCGGTACATGCGGCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SPVRGRGPREPW*RFCWRYMRQRL
Trigger: CAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 72 bp TCCTCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTaGTGGCGCTTCTGCTGGCGGTACATGCGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SSPVRGRGPREP*WRFCWRYMRQR
Trigger: CCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
ENST00000598865.5
CDS CCA 72 bp TCTCCGGTGCGCGGCCGTGGACCCAGAGAGCCCTGGTaGCGCTTCTGCTGGCGGTACATGCGGCAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: SPVRGRGPREPW*RFCWRYMRQRL
Trigger: GAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCGCACCGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598865.5
CDS TCA 72 bp TGCTGGTGGCCGGCCCCACCGAGCCCCGCACGTAGGTaGGGTTCCTGCACGAATCCGCCATCCCAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: CWWPAPPSPARR*GSCTNPPSQVW
Trigger: CCAGACCTGGGATGGCGGATTCGTGCAGGAACCTCACCTACGTGCGGGGCTCGGTGGGGCCGGCCACCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS GCA 72 bp TCCCTCCTCCCTGAGGCGAGCTGGGAAAGGGGTGTCTaGGAGTCTCCGTGGGCAGGCCCGAGGCACAGGCAG +
Preference number: 6 (lower is better)
Translates to: SLLPEASWERGV*ESPWAGPRHRQ
Trigger: CTGCCTGTGCCTCGGGCCTGCCCACGGAGACTCGCAGACACCCCTTTCCCAGCTCGCCTCAGGGAGGAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CCA 72 bp GGCCGTGGACCCAGAGAGCCCTGGTGGCGCTTCTGCTaGCGGTACATGCGGCAGAGGCTGAGGGTGACCGAG +
Preference number: 6 (lower is better)
Translates to: GRGPREPWWRFC*RYMRQRLRVTE
Trigger: CTCGGTCACCCTCAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291294.7
ENST00000595460.1
ENST00000596260.1
CDS CCA 72 bp GAGGCGAGCTGGGAAAGGGGTGTCTGCGAGTCTCCGTaGGCAGGCCCGAGGCACAGGCAGCAGACCCAGAGC +
Preference number: 6 (lower is better)
Translates to: EASWERGVCESP*AGPRHRQQTQS
Trigger: GCTCTGGGTCTGCTGCCTGTGCCTCGGGCCTGCCCACGGAGACTCGCAGACACCCCTTTCCCAGCTCGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS GCA 72 bp CGCGGCCGTGGACCCAGAGAGCCCTGGTGGCGCTTCTaGTGGCGGTACATGCGGCAGAGGCTCTCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: RGRGPREPWWRF*WRYMRQRLSSL
Trigger: AAGACTGGAGAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598865.5
CDS CCA 72 bp GGCCGTGGACCCAGAGAGCCCTGGTGGCGCTTCTGCTaGCGGTACATGCGGCAGAGGCTCTCCAGTCTTGCC +
Preference number: 6 (lower is better)
Translates to: GRGPREPWWRFC*RYMRQRLSSLA
Trigger: GGCAAGACTGGAGAGCCTCTGCCGCATGTACCGCCAGCAGAAGCGCCACCAGGGCTCTCTGGGTCCACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598865.5
CDS TCA 72 bp CTGTCAGGGGCGACAGCCTGGGTGAAGCAGCGGATCTaGGGGCAGGGTGAGGGCGTCAAGGAGCACCCAGGA +
Preference number: 6 (lower is better)
Translates to: LSGATAWVKQRI*GQGEGVKEHPG
Trigger: TCCTGGGTGCTCCTTGACGCCCTCACCCTGCCCTCAGATCCGCTGCTTCACCCAGGCTGTCGCCCCTGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597185.1
CDS GCA 72 bp CGCTGGCTTCTGCTTTGGACGACGTTCCCACGGCGCTaGCGCTGGACTGCTGTGTGGGAGGCAAGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: RWLLLWTTFPRR*RWTAVWEARAP
Trigger: TGGAGCCCTTGCCTCCCACACAGCAGTCCAGCGGCAGCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CCA 72 bp GCCATGACCACTGTCATGAGGGCCAGCAGGATCAGGTaGTCCACCTCGTCCTCTCCGGTGCGCGGCCGTGGA +
Preference number: 6 (lower is better)
Translates to: AMTTVMRASRIR*STSSSPVRGRG
Trigger: TCCACGGCCGCGCACCGGAGAGGACGAGGTGGACCACCTGATCCTGCTGGCCCTCATGACAGTGGTCATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000595460.1
ENST00000596260.1
ENST00000598865.5
CDS CCA 72 bp GTCAGCAGAGGGAGCAGGCGACGCTGGCTTCTGCTTTaGACGACGTTCCCACGGCGCTGCCGCTGGACTGCT +
Preference number: 6 (lower is better)
Translates to: VSRGSRRRWLLL*TTFPRRCRWTA
Trigger: AGCAGTCCAGCGGCAGCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCCTCTGCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CAA 72 bp TGTCAGCAGAGGGAGCAGGCGACGCTGGCTTCTGCTTaGGACGACGTTCCCACGGCGCTGCCGCTGGACTGC +
Preference number: 6 (lower is better)
Translates to: CQQREQATLASA*DDVPTALPLDC
Trigger: GCAGTCCAGCGGCAGCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCCTCTGCTGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS GCA 72 bp GAAATGTCAGCAGAGGGAGCAGGCGACGCTGGCTTCTaGTTTGGACGACGTTCCCACGGCGCTGCCGCTGGA +
Preference number: 6 (lower is better)
Translates to: EMSAEGAGDAGF*FGRRSHGAAAG
Trigger: TCCAGCGGCAGCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCCTCTGCTGACATTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS CAA 90 bp AGCTTGAAATGTCAGCAGAGGGAGCAGGCGACGCTGGCTTCTGCTTaGGACGACGTTCCCACGGCGCTGCCGCTGGACTGCTGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: SLKCQQREQATLASA*DDVPTALPLDCCVG
Trigger: TCCCACACAGCAGTCCAGCGGCAGCGCCGTGGGAACGTCGTCCAAAGCAGAAGCCAGCGTCGCCTGCTCCCTCTGCTGACATTTCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS GCA 72 bp CCAGGCTCTCCTGTCCCGTGCGTCTGTGCCTTCACTTaGTTTGCTCCTCGTGTCTCTCGCTGCCTGTGTCGG +
Preference number: 6 (lower is better)
Translates to: PGSPVPCVCAFT*FAPRVSRCLCR
Trigger: CCGACACAGGCAGCGAGAGACACGAGGAGCAAAGCAAGTGAAGGCACAGACGCACGGGACAGGAGAGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS CCA 72 bp ACTCAGATGTCCCTGCTGGCCAGTCCTTTTGGCAGCTaGGGCCTCCCAGCCAACCCCCAGTTCTCCTGTGTG +
Preference number: 6 (lower is better)
Translates to: TQMSLLASPFGS*GLPANPQFSCV
Trigger: CACACAGGAGAACTGGGGGTTGGCTGGGAGGCCCCAGCTGCCAAAAGGACTGGCCAGCAGGGACATCTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595460.1
CDS CAA 72 bp CCCAGGCTCTCCTGTCCCGTGCGTCTGTGCCTTCACTaGCTTTGCTCCTCGTGTCTCTCGCTGCCTGTGTCG +
Preference number: 6 (lower is better)
Translates to: PRLSCPVRLCLH*LCSSCLSLPVS
Trigger: CGACACAGGCAGCGAGAGACACGAGGAGCAAAGCAAGTGAAGGCACAGACGCACGGGACAGGAGAGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS GCA 72 bp CCAGTCTTGCCCAGGCTCTCCTGTCCCGTGCGTCTGTaGCTTCACTTGCTTTGCTCCTCGTGTCTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: PVLPRLSCPVRL*LHLLCSSCLSL
Trigger: CAGCGAGAGACACGAGGAGCAAAGCAAGTGAAGGCACAGACGCACGGGACAGGAGAGCCTGGGCAAGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS TCA 72 bp TCGCCCGAAGACAGGGCAGAGATCACAGGGTCAGCTTaGAATGTCAGCAGAGGGAGCAGGCGACGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: SPEDRAEITGSA*NVSRGSRRRWL
Trigger: AAGCCAGCGTCGCCTGCTCCCTCTGCTGACATTTCAAGCTGACCCTGTGATCTCTGCCCTGTCTTCGGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
CDS GCA 72 bp CTCTCCTGTCCCGTGCGTCTGTGCCTTCACTTGCTTTaGTCCTCGTGTCTCTCGCTGCCTGTGTCGGTCTGT +
Preference number: 6 (lower is better)
Translates to: LSCPVRLCLHLL*SSCLSLPVSVC
Trigger: ACAGACCGACACAGGCAGCGAGAGACACGAGGAGCAAAGCAAGTGAAGGCACAGACGCACGGGACAGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291294.7
CDS CCA 72 bp CCGAGGCACAGGCAGCAGACCCAGAGCTTGAGTCGCTaGAAGACAGCCTTGCGGAAAAGGATGAAGACCCAG +
Preference number: 6 (lower is better)
Translates to: PRHRQQTQSLSR*KTALRKRMKTQ
Trigger: CTGGGTCTTCATCCTTTTCCGCAAGGCTGTCTTCCAGCGACTCAAGCTCTGGGTCTGCTGCCTGTGCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291294.7
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5