RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTGFR (Homo sapiens)

Ensembl gene IDs: ENSG00000122420

Ensembl transcript IDs: ENST00000370756.3, ENST00000370757.8, ENST00000370758.5, ENST00000497923.5

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTAAGATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATaGCCATGTTGCAAGATCTCCTCAAGTCAGTACACATGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: PKICTHLSHSLKPCT*PCCKISSSQYTWPG
Trigger: CCCTGGCCATGTGTACTGACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR GCA 90 bp AACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTAAAGCCTTaGACATGGCCATGTTGCAAGATCTCCTCAAGTCAGTACACATGG +
Preference number: 1 (lower is better)
Translates to: NPPKICTHLSHSLKP*TWPCCKISSSQYTW
Trigger: CCATGTGTACTGACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR CCA 90 bp TTGCAAGATCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATaGCAATACAGCAAGAATTCTGCCATTTATTTAGAAGCCTCAAGG +
Preference number: 1 (lower is better)
Translates to: LQDLLKSVHMARVTS*QYSKNSAIYLEASR
Trigger: CCTTGAGGCTTCTAAATAAATGGCAGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGATCTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR TCA 90 bp TCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATaGATTCTGGGTGTCATGACCATGCATGTGTTAATTGAGGCTACA +
Preference number: 1 (lower is better)
Translates to: SARPGICRGCYNKPS*ILGVMTMHVLIEAT
Trigger: TGTAGCCTCAATTAACACATGCATGGTCATGACACCCAGAATTCATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR TCA 90 bp AGGACAGCCTTTCGTAGAAGAATATATACCCAAGGATCTAAGATTTaGTTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAG +
Preference number: 1 (lower is better)
Translates to: RTAFRRRIYTQGSKI*FHVAIRRAKSVVSQ
Trigger: CTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAAAGGCTGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
3UTR GCA 90 bp ACACAAATAATGGCTCAAGGTAAAGCACCTTTTGCCAATATTCTTTaGACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATCCA +
Preference number: 1 (lower is better)
Translates to: TQIMAQGKAPFANIL*TYHWHVASVCLHYP
Trigger: TGGATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGCAAAAGGTGCTTTACCTTGAGCCATTATTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTCCTGGAGCCCCTGAATaGGAGTTTCTTCTCCATGCC +
Preference number: 2 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSPGAPE*EFLLHA
Trigger: GGCATGGAGAAGAAACTCTCATTCAGGGGCTCCAGG...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAAGGATCCTGGAGCCCCTaGATGAGAGTTTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEGSWSP*MRVSSP
Trigger: TGGAGAAGAAACTCTCATTCAGGGGCTCCAGGATCC...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACGTCAGGCAACCTGTCTaGCAGACCTGGAATATGCAG +
Preference number: 2 (lower is better)
Translates to: GQATCLPDLEYAEVVITNVRQPV*QTWNMQ
Trigger: CTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGAC...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATACCTGTCTGCCAGACCTaGAATATGCAGAGGTTGTTA +
Preference number: 2 (lower is better)
Translates to: PILDRIAGSGNLSARPGIPVCQT*NMQRLL
Trigger: TAACAACCTCTGCATATTCCAGGTCTGGCAGACAGG...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR CAA 90 bp TCTGGAGCCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTaGTTTGATCCACTTTCATGTTGCCTCTCCATCCACACCTTGTTT +
Preference number: 2 (lower is better)
Translates to: SGASGVTSEPAPMYK*FDPLSCCLSIHTLF
Trigger: AAACAAGGTGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGGCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
3UTR-3UTR TCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTTACACATGGCCAGGGTaGCATCATGGCAATACAGCA +
Preference number: 2 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSYTWPG*HHGNTA
Trigger: TGCTGTATTGCCATGATGTCACCCTGGCCATGTGTA...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR CAA 90 bp ATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTaGCAAGATCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCA +
Preference number: 2 (lower is better)
Translates to: MYTSLSLLKALHMAM*QDLLKSVHMARVTS
Trigger: TGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR CAA 90 bp GAGCCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTTGTTaGATCCACTTTCATGTTGCCTCTCCATCCACACCTTGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: EPQVSRLSQHPCISC*IHFHVASPSTPCFS
Trigger: AGAAAAACAAGGTGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497923.5
3UTR-3UTR TCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTCATGCATGTGTTAATTaGGGCTACACAATGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSHACVN*GYTMRG
Trigger: GCCCCTCATTGTGTAGCCTCAATTAACACATGCATG...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATTTCACTATGCAGGCTaGATTAAGATGTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: PILDRIAGSGNLSARPGIFHYAG*IKMFSG
Trigger: GCCAGAGAACATCTTAATGCAGCCTGCATAGTGAAA...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp GCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATGTCAGGCAACCTGTCTaGCAGACCTGGAATATGCAG +
Preference number: 2 (lower is better)
Translates to: ATCLPDLEYAEVVITNHHVRQPV*QTWNMQ
Trigger: CTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGAC...ATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATACTACATGATGAAGCCTaGATTTTCCAGTTAGGCTAC +
Preference number: 2 (lower is better)
Translates to: LQGQATCLPDLEYAEVVILHDEA*IFQLGY
Trigger: GTAGCCTAACTGGAAAATTCAGGCTTCATCATGTAG...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTAAGTGCTTGGCAAATTaGCAGTCTTCCCCTCTTAGT +
Preference number: 2 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSKCLAN*QSSPLS
Trigger: ACTAAGAGGGGAAGACTGGCAATTTGCCAAGCACTT...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp GCTGCCCCCTGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGTGCACATGGCCATGTTaGAAGATCTCCTCAAGTCAG +
Preference number: 2 (lower is better)
Translates to: AAPWEVSKATLFMLAGEVCTWPC*KISSSQ
Trigger: CTGACTTGAGGAGATCTTGCAACATGGCCATGTGCA...CACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCAGGGGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370757.8
3UTR-3UTR TCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAACTACATGATGAAGCCTaGATTTTCCAGTTAGGCTAC +
Preference number: 2 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQELHDEA*IFQLGY
Trigger: GTAGCCTAACTGGAAAATTCAGGCTTCATCATGTAG...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATATATAACAAACCATCATaGATTCTGGGTGTCATGACC +
Preference number: 2 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIYNKPS*ILGVMT
Trigger: GGTCATGACACCCAGAATTCATGATGGTTTGTTATA...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTTCACTATGCAGGCTaGATTAAGATGTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEFHYAG*IKMFSG
Trigger: GCCAGAGAACATCTTAATGCAGCCTGCATAGTGAAA...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAGCCAGACCTGGAATATaGAGAGGTTGTTATAACAAA +
Preference number: 2 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIARPGI*RGCYNK
Trigger: TTTGTTATAACAACCTCTGCATATTCCAGGTCTGGC...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CCA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCCCTGTCTGCCAGACCTaGAATATGCAGAGGTTGTTA +
Preference number: 2 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGPVCQT*NMQRLL
Trigger: TAACAACCTCTGCATATTCCAGGTCTGGCAGACAGG...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACTTAGCTACAGAGCGGTaGTCTCAAAATAACCATTTC +
Preference number: 2 (lower is better)
Translates to: GQATCLPDLEYAEVVITNLATER*SQNNHF
Trigger: GAAATGGTTATTTTGAGATCACCGCTCTGTAGCTAA...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCCATGCATGTGTTAATTaGGGCTACACAATGAGGGGC +
Preference number: 2 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLHACVN*GYTMRG
Trigger: GCCCCTCATTGTGTAGCCTCAATTAACACATGCATG...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCCTATTTGTCAAATATaGCAAGAATGGGCCCATTCT +
Preference number: 2 (lower is better)
Translates to: GQATCLPDLEYAEVVITNPICQI*QEWAHS
Trigger: AGAATGGGCCCATTCTTGTCATATTTGACAAATAGG...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAAAGTGCTTGGCAAATTaGCAGTCTTCCCCTCTTAGT +
Preference number: 2 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQKCLAN*QSSPLS
Trigger: ACTAAGAGGGGAAGACTGGCAATTTGCCAAGCACTT...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTATAATAATCCCCAAGTaGTTGGCAAATTGCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSIIIPK*LANCQS
Trigger: AGACTGGCAATTTGCCAAGCACTTGGGGATTATTAT...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGCCAGGGTGACATCATaGCAATACAGCAAGAATTCT +
Preference number: 2 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQARVTS*QYSKNS
Trigger: AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGC...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAACTACATGATGAAGCCTaGATTTTCCAGTTAGGCTAC +
Preference number: 2 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQLHDEA*IFQLGY
Trigger: GTAGCCTAACTGGAAAATTCAGGCTTCATCATGTAG...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCTTAGCTACAGAGCGGTaGTCTCAAAATAACCATTTC +
Preference number: 2 (lower is better)
Translates to: IASLPLLVLVAQALEYAILATER*SQNNHF
Trigger: GAAATGGTTATTTTGAGATCACCGCTCTGTAGCTAA...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCTATAACAAACCATCATaGATTCTGGGTGTCATGACC +
Preference number: 2 (lower is better)
Translates to: QIASLPLLVLVAQALEYAYNKPS*ILGVMT
Trigger: GGTCATGACACCCAGAATTCATGATGGTTTGTTATA...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTTATAACAAACCATCATaGATTCTGGGTGTCATGACC +
Preference number: 2 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSYNKPS*ILGVMT
Trigger: GGTCATGACACCCAGAATTCATGATGGTTTGTTATA...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp TGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGTATGCAAATCCTGGAGCCCCTGAATaGGAGTTTCTTCTCCATGCC +
Preference number: 2 (lower is better)
Translates to: WEVSKATLFMLAGEVYANPGAPE*EFLLHA
Trigger: GGCATGGAGAAGAAACTCTCATTCAGGGGCTCCAGG...ATTTGCATACACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
3UTR-3UTR GCA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCTTTCACTATGCAGGCTaGATTAAGATGTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGFHYAG*IKMFSG
Trigger: GCCAGAGAACATCTTAATGCAGCCTGCATAGTGAAA...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTGATTTGATTCCATGTTaGCATTCGGAGAGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSDLIPC*HSESKK
Trigger: CTTTTTGCTCTCCGAATGGCAACATGGAATCAAATC...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370756.3
3UTR-3UTR CCA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCCTCCACAGCATTGACTaGCAAGCTTATAGAGATTCT +
Preference number: 2 (lower is better)
Translates to: FTMQAALRCSLANRPSKGLHSID*QAYRDS
Trigger: AGAATCTCTATAAGCTTGCCAGTCAATGCTGTGGAG...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370756.3
3UTR-3UTR GCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCGATCCACTTTCATGTTaGCTCTCCATCCACACCTTG +
Preference number: 2 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLDPLSC*LSIHTL
Trigger: CAAGGTGTGGATGGAGAGGCAACATGAAAGTGGATC...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497923.5
3UTR-3UTR TCA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCCCTATTTGTCAAATATaGCAAGAATGGGCCCATTCT +
Preference number: 2 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLPICQI*QEWAHS
Trigger: AGAATGGGCCCATTCTTGTCATATTTGACAAATAGG...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTACCTGTCTGCCAGACCTaGAATATGCAGAGGTTGTTA +
Preference number: 2 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLPVCQT*NMQRLL
Trigger: TAACAACCTCTGCATATTCCAGGTCTGGCAGACAGG...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR TCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTATTTCTCTGCAACTGGTaGCTCAGAAATAGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLFLCNW*LRNSSN
Trigger: GTTGCTGCTATTTCTGAGTCACCAGTTGCAGAGAAA...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370756.3
3UTR-3UTR CCA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTTGCCATTCATAAACTTCCAGTTCTaGAGCCTCAGGTGTCACGTC +
Preference number: 2 (lower is better)
Translates to: FVEEYIPKDLRFDSMLPFINFQF*SLRCHV
Trigger: GACGTGACACCTGAGGCTCCAGAACTGGAAGTTTAT...GAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
3UTR CAA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTaGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGTTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: FVEEYIPKDLRFDSM*PFGEQKVLFHRFPE
Trigger: CTCTGGAAACCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
3UTR-3UTR GCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATGCCAGACCTGGAATATaGAGAGGTTGTTATAACAAA +
Preference number: 2 (lower is better)
Translates to: ANILCTYHWHVASVCLHYARPGI*RGCYNK
Trigger: TTTGTTATAACAACCTCTGCATATTCCAGGTCTGGC...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR GCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCGATTTGATTCCATGTTaGCATTCGGAGAGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLDLIPC*HSESKK
Trigger: CTTTTTGCTCTCCGAATGGCAACATGGAATCAAATC...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
3UTR-3UTR TCA 90 bp TGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGTATGCAAATCCATGCTCTGTAGTTTaGGAAACAGCCACATATAAT +
Preference number: 2 (lower is better)
Translates to: WEVSKATLFMLAGEVYANPCSVV*ETATYN
Trigger: ATTATATGTGGCTGTTTCTCAAACTACAGAGCATGG...ATTTGCATACACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
3UTR-3UTR TCA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTTGCCATTCCAGGTTTCCAGAGAATaGTTTCCATTTATTCCAATG +
Preference number: 2 (lower is better)
Translates to: FVEEYIPKDLRFDSMLPFQVSRE*FPFIPM
Trigger: CATTGGAATAAATGGAAATCATTCTCTGGAAACCTG...GAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
3UTR TCA 72 bp AGAAGCCTCAAGGAGAAGGATCCTGGAGCCCCTGAATaGGAGTTTCTTCTCCATGCCTCTCCCCAGTCAAAA +
Preference number: 3 (lower is better)
Translates to: RSLKEKDPGAPE*EFLLHASPQSK
Trigger: TTTTGACTGGGGAGAGGCATGGAGAAGAAACTCTCATTCAGGGGCTCCAGGATCCTTCTCCTTGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR GCA 72 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTaGAAGATCTCCTCAAGTCAGTACACATGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: LSHSLKPCTWPC*KISSSQYTWPG
Trigger: CCCTGGCCATGTGTACTGACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR CCA 72 bp CAGCAGAGCTCCCCTTCAGAGTGGACAGGAACCATGTaGGAGATACAAACTTTTGTGAAGTTTATGGCGCTG +
Preference number: 3 (lower is better)
Translates to: QQSSPSEWTGTM*EIQTFVKFMAL
Trigger: CAGCGCCATAAACTTCACAAAAGTTTGTATCTCCCACATGGTTCCTGTCCACTCTGAAGGGGAGCTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370757.8
3UTR-3UTR CAA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAATGCACTCCACAGCATaGACTGGCAAGCTTATAGAG +
Preference number: 3 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIMHSTA*TGKLIE
Trigger: CTCTATAAGCTTGCCAGTCAATGCTGTGGAGTGCAT...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370756.3
3UTR-3UTR CAA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATATGTGTCTACCTCCCATaGGCAAAAACAAGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: LQGQATCLPDLEYAEVVICVYLP*AKTSEK
Trigger: TTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACA...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAATAATCCCCAAGTGCTaGGCAAATTGCCAGTCTTCC +
Preference number: 3 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQIIPKC*ANCQSS
Trigger: GGAAGACTGGCAATTTGCCAAGCACTTGGGGATTAT...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAATCACTCCTTAAAGCCTaGCACATGGCCATGTTGCAA +
Preference number: 3 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQSLLKA*HMAMLQ
Trigger: TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGA...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR TCA 72 bp TGCAAGATCTCCTCAAGTCAGTACACATGGCCAGGGTaGCATCATGGCAATACAGCAAGAATTCTGCCATTT +
Preference number: 3 (lower is better)
Translates to: CKISSSQYTWPG*HHGNTARILPF
Trigger: AAATGGCAGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGATCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR TCA 72 bp TGTTGCCTCCAGATGGATATTCTAACAGCCTGTGTGTaGTTCACCATGCTCTGTAGTTTGAGAAACAGCCAC +
Preference number: 3 (lower is better)
Translates to: CCLQMDILTACV*FTMLCSLRNSH
Trigger: GTGGCTGTTTCTCAAACTACAGAGCATGGTGAATCACACACAGGCTGTTAGAATATCCATCTGGAGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
3UTR CCA 72 bp TGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATaGCCATGTTGCAAGATCTCCTCAAGTCAGTACACA +
Preference number: 3 (lower is better)
Translates to: CTHLSHSLKPCT*PCCKISSSQYT
Trigger: TGTGTACTGACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACTGTGTCTACCTCCCATaGGCAAAAACAAGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: GQATCLPDLEYAEVVITNCVYLP*AKTSEK
Trigger: TTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACA...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCCATGGCATTATTTTATaGTGTCTACCTCCCATTGGC +
Preference number: 3 (lower is better)
Translates to: QIASLPLLVLVAQALEYAHGIIL*CLPPIG
Trigger: GCCAATGGGAGGTAGACACAATAAAATAATGCCATG...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCCATGGCATTATTTTATaGTGTCTACCTCCCATTGGC +
Preference number: 3 (lower is better)
Translates to: IASLPLLVLVAQALEYAIHGIIL*CLPPIG
Trigger: GCCAATGGGAGGTAGACACAATAAAATAATGCCATG...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCGCATGTAGCTTCGGTTaGTTTGCATTATCCATGGTA +
Preference number: 3 (lower is better)
Translates to: QIASLPLLVLVAQALEYAACSFG*FALSMV
Trigger: TACCATGGATAATGCAAACAAACCGAAGCTACATGC...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCGCATGTAGCTTCGGTTaGTTTGCATTATCCATGGTA +
Preference number: 3 (lower is better)
Translates to: IASLPLLVLVAQALEYAIACSFG*FALSMV
Trigger: TACCATGGATAATGCAAACAAACCGAAGCTACATGC...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR TCA 72 bp ATGAATTCTGGGTGTCATGACCATGCATGTGTTAATTaGGGCTACACAATGAGGGGCAAAATAGGCCAGATC +
Preference number: 3 (lower is better)
Translates to: MNSGCHDHACVN*GYTMRGKIGQI
Trigger: GATCTGGCCTATTTTGCCCCTCATTGTGTAGCCTCAATTAACACATGCATGGTCATGACACCCAGAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR GCA 72 bp AAGATATGTACACATCTCTCTCACTCCTTAAAGCCTTaGACATGGCCATGTTGCAAGATCTCCTCAAGTCAG +
Preference number: 3 (lower is better)
Translates to: KICTHLSHSLKP*TWPCCKISSSQ
Trigger: CTGACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTTGTAGGCAGTCCTATTaGTCAAATATGACAAGAATG +
Preference number: 3 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSCRQSY*SNMTRM
Trigger: CATTCTTGTCATATTTGACAAATAGGACTGCCTACA...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTAAGGTAAAGCACCTTTaGCCAATATTCTTTGCACCT +
Preference number: 3 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSKVKHL*PIFFAP
Trigger: AGGTGCAAAGAATATTGGCAAAAGGTGCTTTACCTT...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR GCA 72 bp TTAATTGTTATAATAATCCCCAAGTGCTTGGCAAATTaGCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGC +
Preference number: 3 (lower is better)
Translates to: LIVIIIPKCLAN*QSSPLSTGSTG
Trigger: GCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTGCCAAGCACTTGGGGATTATTATAACAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCTGTGTCTACCTCCCATaGGCAAAAACAAGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGCVYLP*AKTSEK
Trigger: TTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACA...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCAGATTTGATTCCATGTaGCCATTCGGAGAGCAAAAA +
Preference number: 3 (lower is better)
Translates to: FTMQAALRCSLANRPSKGRFDSM*PFGEQK
Trigger: TTTTTGCTCTCCGAATGGCAACATGGAATCAAATCT...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370756.3
3UTR-3UTR CAA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTATCACTCCTTAAAGCCTaGCACATGGCCATGTTGCAA +
Preference number: 3 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLSLLKA*HMAMLQ
Trigger: TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGA...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTATGCACTCCACAGCATaGACTGGCAAGCTTATAGAG +
Preference number: 3 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFMHSTA*TGKLIE
Trigger: CTCTATAAGCTTGCCAGTCAATGCTGTGGAGTGCAT...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
3UTR TCA 72 bp CCTGGAATATGCAGAGGTTGTTATAACAAACCATCATaGATTCTGGGTGTCATGACCATGCATGTGTTAATT +
Preference number: 3 (lower is better)
Translates to: PGICRGCYNKPS*ILGVMTMHVLI
Trigger: AATTAACACATGCATGGTCATGACACCCAGAATTCATGATGGTTTGTTATAACAACCTCTGCATATTCCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTAAAGGTAAAGCACCTTTaGCCAATATTCTTTGCACCT +
Preference number: 3 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLKVKHL*PIFFAP
Trigger: AGGTGCAAAGAATATTGGCAAAAGGTGCTTTACCTT...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR-3UTR CAA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTCCATGTATAAGTTGTTaGATCCACTTTCATGTTGCC +
Preference number: 3 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIPCISC*IHFHVA
Trigger: GGCAACATGAAAGTGGATCAAACAACTTATACATGG...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497923.5
3UTR-3UTR CAA 90 bp TGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGTATGCAAATAACAAGTCCTCTTATTaGGGTTCTAAACTCAGAGTA +
Preference number: 3 (lower is better)
Translates to: WEVSKATLFMLAGEVYANNKSSY*GSKLRV
Trigger: TACTCTGAGTTTAGAACCCAAATAAGAGGACTTGTT...ATTTGCATACACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
3UTR TCA 72 bp TTTCGTAGAAGAATATATACCCAAGGATCTAAGATTTaGTTCCATGTTGCCATTCGGAGAGCAAAAAGTGTT +
Preference number: 3 (lower is better)
Translates to: FRRRIYTQGSKI*FHVAIRRAKSV
Trigger: AACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
3UTR TCA 72 bp TCTGACAATAGTATCTTCAAACTACATGATGAAGCCTaGATTTTCCAGTTAGGCTACAGGTATTTAACTAAC +
Preference number: 3 (lower is better)
Translates to: SDNSIFKLHDEA*IFQLGYRYLTN
Trigger: GTTAGTTAAATACCTGTAGCCTAACTGGAAAATTCAGGCTTCATCATGTAGTTTGAAGATACTATTGTCAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
3UTR TCA 72 bp AGATTGTTTCTTATTACAGACACATTGAGGCTTTTCTaGATGATATATCTAAACCTGGAGGTTTGGGAAATC +
Preference number: 3 (lower is better)
Translates to: RLFLITDTLRLF*MIYLNLEVWEI
Trigger: GATTTCCCAAACCTCCAGGTTTAGATATATCATTCAGAAAAGCCTCAATGTGTCTGTAATAAGAAACAATCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR TCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATACCAGCGCGGAGATCCTaGTCGGGCGCCGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGIPARRS*SGAGCG
Trigger: ACCACAGCCGGCGCCCGATCAGGATCTCCGCGCTGG...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR GCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACGCCCCGCGCCGCCGCTaGCTCAAGTTCCACCGATCC +
Preference number: 4 (lower is better)
Translates to: GQATCLPDLEYAEVVITNAPRRR*LKFHRS
Trigger: GGATCGGTGGAACTTGAGGCAGCGGCGGCGCGGGGC...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR CCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACATCGGGCGCCGGCTGTaGTCCAGCCGCTCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GQATCLPDLEYAEVVITNIGRRL*SSRSSP
Trigger: AGGGGACGAGCGGCTGGACCACAGCCGGCGCCCGAT...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR CCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTATCGGGCGCCGGCTGTaGTCCAGCCGCTCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSIGRRL*SSRSSP
Trigger: AGGGGACGAGCGGCTGGACCACAGCCGGCGCCCGAT...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR CCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAAGGCGCGCGCGGCTCCTaGGATCCCTCTGCACCTAGC +
Preference number: 4 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEGARGS*DPSAPS
Trigger: GCTAGGTGCAGAGGGATCCCAGGAGCCGCGCGCGCC...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR GCA 90 bp CCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACGCCCCGCGCCGCCGCTaGCTCAAGTTCCACCGATCC +
Preference number: 4 (lower is better)
Translates to: PAPMYKLFDPLSCCLSIHAPRRR*LKFHRS
Trigger: GGATCGGTGGAACTTGAGGCAGCGGCGGCGCGGGGC...GTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CCA 90 bp TCTGAGCCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCGGGCGCCGGCTGTaGTCCAGCCGCTCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SEPAPMYKLFDPLSCCLSIGRRL*SSRSSP
Trigger: AGGGGACGAGCGGCTGGACCACAGCCGGCGCCCGAT...GGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR TCA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCCCAGCGCGGAGATCCTaGTCGGGCGCCGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: FTMQAALRCSLANRPSKGPARRS*SGAGCG
Trigger: ACCACAGCCGGCGCCCGATCAGGATCTCCGCGCTGG...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR TCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCGCCAGCCGGGCTCTCTaGGGAGCAGAAGACGGAGCC +
Preference number: 4 (lower is better)
Translates to: IASLPLLVLVAQALEYAIASRAL*GAEDGA
Trigger: GGCTCCGTCTTCTGCTCCTCAGAGAGCCCGGCTGGC...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR GCA 90 bp GCTGCCCCCTGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGCCCTCTGCACCTAGCTaGGCTGGCAGCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AAPWEVSKATLFMLAGEVPSAPS*AGSLGG
Trigger: CCCTCCCAGGCTGCCAGCGCAGCTAGGTGCAGAGGG...CACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCAGGGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR GCA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCGCCCCGCGCCGCCGCTaGCTCAAGTTCCACCGATCC +
Preference number: 4 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLAPRRR*LKFHRS
Trigger: GGATCGGTGGAACTTGAGGCAGCGGCGGCGCGGGGC...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR TCA 90 bp TTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGTTTCCACCAGCGCGGAGATCCTaGTCGGGCGCCGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: FDSMLPFGEQKVLFHRFPPARRS*SGAGCG
Trigger: ACCACAGCCGGCGCCCGATCAGGATCTCCGCGCTGG...TGGAAACCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR TCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATACCTGGAGCCCCTGAATaGGAGTTTCTTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGIPGAPE*EFLLHA
Trigger: GGCATGGAGAAGAAACTCTCATTCAGGGGCTCCAGG...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATGCTGCGCTGGCAGCCTaGGAGGGATGGGGCGCGCGA +
Preference number: 4 (lower is better)
Translates to: ANILCTYHWHVASVCLHYAALAA*EGWGAR
Trigger: TCGCGCGCCCCATCCCTCCCAGGCTGCCAGCGCAGC...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR TCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATAGGCCAAAGAAATCAGTaGTTACCAGGCCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGIGQRNQ*LPGHWP
Trigger: TGGCCAGTGGCCTGGTAATCACTGATTTCTTTGGCC...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATACCTGGAGCCCCTGAATaGGAGTTTCTTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIPGAPE*EFLLHA
Trigger: GGCATGGAGAAGAAACTCTCATTCAGGGGCTCCAGG...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATAGGATCCTGGAGCCCCTaGATGAGAGTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGIGSWSP*MRVSSP
Trigger: TGGAGAAGAAACTCTCATTCAGGGGCTCCAGGATCC...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATGCCAGCCGGGCTCTCTaGGGAGCAGAAGACGGAGCC +
Preference number: 4 (lower is better)
Translates to: ANILCTYHWHVASVCLHYASRAL*GAEDGA
Trigger: GGCTCCGTCTTCTGCTCCTCAGAGAGCCCGGCTGGC...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR TCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATACACATGGCCAGGGTaGCATCATGGCAATACAGCA +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGIYTWPG*HHGNTA
Trigger: TGCTGTATTGCCATGATGTCACCCTGGCCATGTGTA...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCCTGGCAGGTTGTGTTTaGAAGAAGCGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QIASLPLLVLVAQALEYALAGCV*KKRSCR
Trigger: CCTGCAGCTGCGCTTCTTTCAAACACAACCTGCCAG...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACGGCCAAAGAAATCAGTaGTTACCAGGCCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: GQATCLPDLEYAEVVITNGQRNQ*LPGHWP
Trigger: TGGCCAGTGGCCTGGTAATCACTGATTTCTTTGGCC...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CGGCATAAACTTCCAGTTCTGGAGCCTCAGGTGTCACGTCTGAGCCAGCACCCATCTGTCATTTCTCGTTaGGTGTCTTATCGCTATGTA +
Preference number: 4 (lower is better)
Translates to: RHKLPVLEPQVSRLSQHPSVISR*VSYRYV
Trigger: TACATAGCGATAAGACACTCAACGAGAAATGACAGA...TGGGTGCTGGCTCAGACGTGACACCTGAGGCTCCAGAACTGGAAGTTTATGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR GCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATACAATGGCCATCACACTaGCTAGAAGAAGTGGGCACA +
Preference number: 4 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIQWPSH*LEEVGT
Trigger: TGTGCCCACTTCTTCTAGGCAGTGTGATGGCCATTG...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAAGTCAGGCAACCTGTCTaGCAGACCTGGAATATGCAG +
Preference number: 4 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEVRQPV*QTWNMQ
Trigger: CTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGAC...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCACATGGCCATGTTaGAAGATCTCCTCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGICTWPC*KISSSQ
Trigger: CTGACTTGAGGAGATCTTGCAACATGGCCATGTGCA...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATACACTCCTTAAAGCCTTaGACATGGCCATGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGIHSLKP*TWPCCK
Trigger: CTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTG...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR CAA 72 bp TCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTaGCAAGATCTCCTCAAGTCAGTACACATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLSLLKALHMAM*QDLLKSVHMAR
Trigger: CCTGGCCATGTGTACTGACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCCTGGCAGGTTGTGTTTaGAAGAAGCGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGLAGCV*KKRSCR
Trigger: CCTGCAGCTGCGCTTCTTTCAAACACAACCTGCCAG...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATAACTGCAAAGGACATTTaGTTGGTCAAAGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGITAKDI*LVKADP
Trigger: TGGATCCGCTTTGACCAATCAAATGTCCTTTGCAGT...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATACATGCATGTGTTAATTaGGGCTACACAATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIHACVN*GYTMRG
Trigger: GCCCCTCATTGTGTAGCCTCAATTAACACATGCATG...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATACAATACACCGCTCAATaGCCATCACACTGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIQYTAQ*PSHCLE
Trigger: TTCTAGGCAGTGTGATGGCCATTGAGCGGTGTATTG...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
3UTR CAA 72 bp TCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTaGTTTGATCCACTTTCATGTTGCCTCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SGVTSEPAPMYK*FDPLSCCLSIH
Trigger: GTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR TCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCTACACATGGCCAGGGTaGCATCATGGCAATACAGCA +
Preference number: 4 (lower is better)
Translates to: IASLPLLVLVAQALEYAIYTWPG*HHGNTA
Trigger: TGCTGTATTGCCATGATGTCACCCTGGCCATGTGTA...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTCCTGAGTTCTCTGAGTaGTTACAACAGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSPEFSE*LQQQSS
Trigger: GGAGCTCTGCTGTTGTAATCACTCAGAGAACTCAGG...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR GCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATCCCTCTCAAAACTGTaGAGGATTGCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQESLSKL*RIAVQT
Trigger: TGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGA...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTTCCCTCTCAAAACTGTaGAGGATTGCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSSLSKL*RIAVQT
Trigger: TGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGA...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCCAATGGCCATCACACTaGCTAGAAGAAGTGGGCACA +
Preference number: 4 (lower is better)
Translates to: QIASLPLLVLVAQALEYAQWPSH*LEEVGT
Trigger: TGTGCCCACTTCTTCTAGGCAGTGTGATGGCCATTG...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAAAGTGCTTGGCAAATTaGCAGTCTTCCCCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIKCLAN*QSSPLS
Trigger: ACTAAGAGGGGAAGACTGGCAATTTGCCAAGCACTT...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTCACTCCTTAAAGCCTTaGACATGGCCATGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSHSLKP*TWPCCK
Trigger: CTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTG...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAACAATACACCGCTCAATaGCCATCACACTGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEQYTAQ*PSHCLE
Trigger: TTCTAGGCAGTGTGATGGCCATTGAGCGGTGTATTG...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACGATATCACAGAAGATTaGGCAGGGTGGGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GQATCLPDLEYAEVVITNDITED*AGWESK
Trigger: TTTGCTCTCCCACCCTGCCCAATCTTCTGTGATATC...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CCA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCAGCTCCCCTTCAGAGTaGACAGGAACCATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLSSPSE*TGTMWE
Trigger: CTCCCACATGGTTCCTGTCCACTCTGAAGGGGAGCT...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CCA 90 bp CCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTTGTTTGATCCACTTTATAAACTTCCAGTTCTaGAGCCTCAGGTGTCACGTC +
Preference number: 4 (lower is better)
Translates to: PQVSRLSQHPCISCLIHFINFQF*SLRCHV
Trigger: GACGTGACACCTGAGGCTCCAGAACTGGAAGTTTAT...AAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR TCA 90 bp CTAAGATTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGCTGGCAGGTTGTGTTTaGAAGAAGCGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRFDSMLPFGEQKVLFHRLAGCV*KKRSCR
Trigger: CCTGCAGCTGCGCTTCTTTCAAACACAACCTGCCAG...CCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR TCA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCTCTGATATGCCTTCATaGGAATGGCGATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: FTMQAALRCSLANRPSKGSDMPS*EWRWQG
Trigger: GCCTTGCCATCGCCATTCTCATGAAGGCATATCAGA...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACTTTCTCTGCAACTGGTaGCTCAGAAATAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GQATCLPDLEYAEVVITNFLCNW*LRNSSN
Trigger: GTTGCTGCTATTTCTGAGTCACCAGTTGCAGAGAAA...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CTAAGATTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGCCTGGAGCCCCTGAATaGGAGTTTCTTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: LRFDSMLPFGEQKVLFHRPGAPE*EFLLHA
Trigger: GGCATGGAGAAGAAACTCTCATTCAGGGGCTCCAGG...CCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370756.3
CDS-3UTR TCA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCTACACATGGCCAGGGTaGCATCATGGCAATACAGCA +
Preference number: 4 (lower is better)
Translates to: FTMQAALRCSLANRPSKGYTWPG*HHGNTA
Trigger: TGCTGTATTGCCATGATGTCACCCTGGCCATGTGTA...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CCCATTCTAGATAGGATTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATAGCCAGACCTGGAATATaGAGAGGTTGTTATAACAAA +
Preference number: 4 (lower is better)
Translates to: PILDRIAGSGNLSARPGIARPGI*RGCYNK
Trigger: TTTGTTATAACAACCTCTGCATATTCCAGGTCTGGC...TATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAATCCTATCTAGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp CCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACAGCCGGTTTTCCGTCTaGCAGGTTGTGTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: PAPMYKLFDPLSCCLSIHSRFSV*QVVFER
Trigger: TCTTTCAAACACAACCTGCCAGACGGAAAACCGGCT...GTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTTTAAAGCCTTGCACATaGCCATGTTGCAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSLKPCT*PCCKIS
Trigger: GGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAA...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp AAACTTCCAGTTCTGGAGCCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATATTCTGTCTAAATCTCTaGTATGCCTTCATGAGAATG +
Preference number: 4 (lower is better)
Translates to: KLPVLEPQVSRLSQHPCIFCLNL*YAFMRM
Trigger: CATTCTCATGAAGGCATATCAGAGATTTAGACAGAA...TATACATGGGTGCTGGCTCAGACGTGACACCTGAGGCTCCAGAACTGGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR TCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCACTGCAAAGGACATTTaGTTGGTCAAAGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: IASLPLLVLVAQALEYAITAKDI*LVKADP
Trigger: TGGATCCGCTTTGACCAATCAAATGTCCTTTGCAGT...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATATATCTTCCCAGTCTTTaGTGTCTTCTGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIYLPSL*CLLCCR
Trigger: TCTACAACACAGAAGACATCAAAGACTGGGAAGATA...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCTTTCTCTGCAACTGGTaGCTCAGAAATAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: QIASLPLLVLVAQALEYAFLCNW*LRNSSN
Trigger: GTTGCTGCTATTTCTGAGTCACCAGTTGCAGAGAAA...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAACATGCATGTGTTAATTaGGGCTACACAATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQHACVN*GYTMRG
Trigger: GCCCCTCATTGTGTAGCCTCAATTAACACATGCATG...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTTGTTTGATCCACTTTTTGGCCATTGTAACTTaGCGGCATAAACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PQVSRLSQHPCISCLIHFLAIVT*RHKLPV
Trigger: AACTGGAAGTTTATGCCGTCAAGTTACAATGGCCAA...AAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR GCA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTAAGTGCTTGGCAAATTaGCAGTCTTCCCCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSKCLAN*QSSPLS
Trigger: ACTAAGAGGGGAAGACTGGCAATTTGCCAAGCACTT...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAATAATAATCCCCAAGTaGTTGGCAAATTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIIIIPK*LANCQS
Trigger: AGACTGGCAATTTGCCAAGCACTTGGGGATTATTAT...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCAGCTGGAGAAGTGTATaGAAATGTGTGTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IASLPLLVLVAQALEYAISWRSV*KCVLPP
Trigger: TGGAGGCAACACACATTTGCATACACTTCTCCAGCT...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAACAATACACCGCTCAATaGCCATCACACTGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQQYTAQ*PSHCLE
Trigger: TTCTAGGCAGTGTGATGGCCATTGAGCGGTGTATTG...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAACTCCACAGCATTGACTaGCAAGCTTATAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQELHSID*QAYRDS
Trigger: AGAATCTCTATAAGCTTGCCAGTCAATGCTGTGGAG...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAACCTGTCTGCCAGACCTaGAATATGCAGAGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQPVCQT*NMQRLL
Trigger: TAACAACCTCTGCATATTCCAGGTCTGGCAGACAGG...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTGCCAGGGTGACATCATaGCAATACAGCAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSARVTS*QYSKNS
Trigger: AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGC...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCGCCAGGGTGACATCATaGCAATACAGCAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: IASLPLLVLVAQALEYAIARVTS*QYSKNS
Trigger: AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGC...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCTTAAAGCCTTGCACATaGCCATGTTGCAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: IASLPLLVLVAQALEYAILKPCT*PCCKIS
Trigger: GGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAA...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATGGACAGGAACCATGTaGGAGATACAAACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEWTGTM*EIQTFV
Trigger: CACAAAAGTTTGTATCTCCCACATGGTTCCTGTCCA...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR TCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATGGCCAAAGAAATCAGTaGTTACCAGGCCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: ANILCTYHWHVASVCLHYGQRNQ*LPGHWP
Trigger: TGGCCAGTGGCCTGGTAATCACTGATTTCTTTGGCC...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATACAGGTTTCCAGAGAATaGTTTCCATTTATTCCAATG +
Preference number: 4 (lower is better)
Translates to: LQGQATCLPDLEYAEVVIQVSRE*FPFIPM
Trigger: CATTGGAATAAATGGAAATCATTCTCTGGAAACCTG...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATTTTCTCTGCAACTGGTaGCTCAGAAATAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: ATCLPDLEYAEVVITNHHFLCNW*LRNSSN
Trigger: GTTGCTGCTATTTCTGAGTCACCAGTTGCAGAGAAA...ATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTTTAGCTACAGAGCGGTaGTCTCAAAATAACCATTTC +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSLATER*SQNNHF
Trigger: GAAATGGTTATTTTGAGATCACCGCTCTGTAGCTAA...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTTATAACAAACCATCATaGATTCTGGGTGTCATGACC +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSYNKPS*ILGVMT
Trigger: GGTCATGACACCCAGAATTCATGATGGTTTGTTATA...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTCAAAAGCAGAAACGATaGCTTGGACTTCTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSQKQKR*LGLLSK
Trigger: TTTAGACAGAAGTCCAAGGCATCGTTTCTGCTTTTG...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTGATTTGATTCCATGTTaGCATTCGGAGAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSDLIPC*HSESKK
Trigger: CTTTTTGCTCTCCGAATGGCAACATGGAATCAAATC...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACGCCAGACCTGGAATATaGAGAGGTTGTTATAACAAA +
Preference number: 4 (lower is better)
Translates to: GQATCLPDLEYAEVVITNARPGI*RGCYNK
Trigger: TTTGTTATAACAACCTCTGCATATTCCAGGTCTGGC...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCGTCAGGCAACCTGTCTaGCAGACCTGGAATATGCAG +
Preference number: 4 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLVRQPV*QTWNMQ
Trigger: CTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGAC...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACATAATAATCCCCAAGTaGTTGGCAAATTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GQATCLPDLEYAEVVITNIIIPK*LANCQS
Trigger: AGACTGGCAATTTGCCAAGCACTTGGGGATTATTAT...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAAGCTCCATTGATGAGATaGCCAAAGAAATCAGTGATT +
Preference number: 4 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEAPLMR*PKKSVI
Trigger: AATCACTGATTTCTTTGGCCATCTCATCAATGGAGC...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCAAAGGACATTTGATTaGTCAAAGCGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: GQATCLPDLEYAEVVITNQRTFD*SKRIHS
Trigger: AGAATGGATCCGCTTTGACCAATCAAATGTCCTTTG...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp CCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACCTCCACAGCATTGACTaGCAAGCTTATAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: PAPMYKLFDPLSCCLSIHLHSID*QAYRDS
Trigger: AGAATCTCTATAAGCTTGCCAGTCAATGCTGTGGAG...GTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR TCA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTTGCCATTCCTGGCAGGTTGTGTTTaGAAGAAGCGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FVEEYIPKDLRFDSMLPFLAGCV*KKRSCR
Trigger: CCTGCAGCTGCGCTTCTTTCAAACACAACCTGCCAG...GAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR TCA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCACTGCAAAGGACATTTaGTTGGTCAAAGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLTAKDI*LVKADP
Trigger: TGGATCCGCTTTGACCAATCAAATGTCCTTTGCAGT...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCCTACATGATGAAGCCTaGATTTTCCAGTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: FTMQAALRCSLANRPSKGLHDEA*IFQLGY
Trigger: GTAGCCTAACTGGAAAATTCAGGCTTCATCATGTAG...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACACTACATGATGAAGCCTaGATTTTCCAGTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: QHPCISCLIHFHVASPSTLHDEA*IFQLGY
Trigger: GTAGCCTAACTGGAAAATTCAGGCTTCATCATGTAG...TGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR TCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTGGATCCTGGAGCCCCTaGATGAGAGTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCGSWSP*MRVSSP
Trigger: TGGAGAAGAAACTCTCATTCAGGGGCTCCAGGATCC...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCAAAACTGTGCAGGATTaGAGTCCAGACATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGKTVQD*SPDILS
Trigger: TGACAAGATGTCTGGACTGCAATCCTGCACAGTTTT...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR GCA 90 bp GCTGCCCCCTGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGCAAAAGCAGAAACGATaGCTTGGACTTCTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: AAPWEVSKATLFMLAGEVQKQKR*LGLLSK
Trigger: TTTAGACAGAAGTCCAAGGCATCGTTTCTGCTTTTG...CACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCAGGGGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR GCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTAGCATATACAAATACTaGTATGGCTCCATTGATGAG +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSSIYKY*YGSIDE
Trigger: CTCATCAATGGAGCCATAGCAGTATTTGTATATGCT...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACGACCAGAAAACACCATaGAGATACCAAAAATACTGC +
Preference number: 4 (lower is better)
Translates to: PAPMYKLFDPLSCCLSIHDQKTP*RYQKYC
Trigger: GCAGTATTTTTGGTATCTGCATGGTGTTTTCTGGTC...GTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR GCA 90 bp GCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATTTTCACTATGCAGGCTaGATTAAGATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ATCLPDLEYAEVVITNHHFHYAG*IKMFSG
Trigger: GCCAGAGAACATCTTAATGCAGCCTGCATAGTGAAA...ATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTCAGATTACAAGACCATaGTTGTCAGTACTTACAAAG +
Preference number: 4 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSQITRP*LSVLTK
Trigger: CTTTGTAAGTACTGACAAGCATGGTCTTGTAATCTG...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CCA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCGAGACACTAGCTGTTTaGAATTGTTCATGGACATTG +
Preference number: 4 (lower is better)
Translates to: QIASLPLLVLVAQALEYAETLAV*NCSWTL
Trigger: CAATGTCCATGAACAATTCCAAACAGCTAGTGTCTC...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp CTAAGATTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGAGCCGGTTTTCCGTCTaGCAGGTTGTGTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LRFDSMLPFGEQKVLFHRSRFSV*QVVFER
Trigger: TCTTTCAAACACAACCTGCCAGACGGAAAACCGGCT...CCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR CCA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTGCTCCATTGATGAGATaGCCAAAGAAATCAGTGATT +
Preference number: 4 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSAPLMR*PKKSVI
Trigger: AATCACTGATTTCTTTGGCCATCTCATCAATGGAGC...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp CCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACGCTCCATTGATGAGATaGCCAAAGAAATCAGTGATT +
Preference number: 4 (lower is better)
Translates to: PAPMYKLFDPLSCCLSIHAPLMR*PKKSVI
Trigger: AATCACTGATTTCTTTGGCCATCTCATCAATGGAGC...GTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CCA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTCAAAGGACATTTGATTaGTCAAAGCGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSQRTFD*SKRIHS
Trigger: AGAATGGATCCGCTTTGACCAATCAAATGTCCTTTG...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCCTTTGCACCTATCATTaGCATGTAGCTTCGGTTTGT +
Preference number: 4 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGLCTYH*HVASVC
Trigger: ACAAACCGAAGCTACATGCCAATGATAGGTGCAAAG...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTATCTGATATGCCTTCATaGGAATGGCGATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLSDMPS*EWRWQG
Trigger: GCCTTGCCATCGCCATTCTCATGAAGGCATATCAGA...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTGGCCAAAGAAATCAGTaGTTACCAGGCCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIGQRNQ*LPGHWP
Trigger: TGGCCAGTGGCCTGGTAATCACTGATTTCTTTGGCC...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR TCA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCGAAATATTGGTTTTGTaGCTCCAATACACCGCTCAA +
Preference number: 4 (lower is better)
Translates to: FTMQAALRCSLANRPSKGEILVL*LQYTAQ
Trigger: TTGAGCGGTGTATTGGAGTCACAAAACCAATATTTC...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACATATCTTCCCAGTCTTTaGTGTCTTCTGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QHPCISCLIHFHVASPSTYLPSL*CLLCCR
Trigger: TCTACAACACAGAAGACATCAAAGACTGGGAAGATA...TGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR TCA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCCAGGTTTCCAGAGAATaGTTTCCATTTATTCCAATG +
Preference number: 4 (lower is better)
Translates to: QIASLPLLVLVAQALEYAQVSRE*FPFIPM
Trigger: CATTGGAATAAATGGAAATCATTCTCTGGAAACCTG...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACCAGGTTTCCAGAGAATaGTTTCCATTTATTCCAATG +
Preference number: 4 (lower is better)
Translates to: PAPMYKLFDPLSCCLSIHQVSRE*FPFIPM
Trigger: CATTGGAATAAATGGAAATCATTCTCTGGAAACCTG...GTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR TCA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCTTAGCTACAGAGCGGTaGTCTCAAAATAACCATTTC +
Preference number: 4 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGLATER*SQNNHF
Trigger: GAAATGGTTATTTTGAGATCACCGCTCTGTAGCTAA...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAATATAACAAACCATCATaGATTCTGGGTGTCATGACC +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQYNKPS*ILGVMT
Trigger: GGTCATGACACCCAGAATTCATGATGGTTTGTTATA...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATCCTATTTGTCAAATATaGCAAGAATGGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: ATCLPDLEYAEVVITNHHPICQI*QEWAHS
Trigger: AGAATGGGCCCATTCTTGTCATATTTGACAAATAGG...ATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTGGATCCTGGAGCCCCTaGATGAGAGTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIGSWSP*MRVSSP
Trigger: TGGAGAAGAAACTCTCATTCAGGGGCTCCAGGATCC...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp GCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATCCATGCTCTGTAGTTTaGGAAACAGCCACATATAAT +
Preference number: 4 (lower is better)
Translates to: ATCLPDLEYAEVVITNHHPCSVV*ETATYN
Trigger: ATTATATGTGGCTGTTTCTCAAACTACAGAGCATGG...ATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR GCA 90 bp CAAATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCTCTAAATCTCTGATATaGCTTCATGAGAATGGCGAT +
Preference number: 4 (lower is better)
Translates to: QIASLPLLVLVAQALEYASKSLI*LHENGD
Trigger: ATCGCCATTCTCATGAAGGCATATCAGAGATTTAGA...GGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCAGCATATACAAATACTaGTATGGCTCCATTGATGAG +
Preference number: 4 (lower is better)
Translates to: IASLPLLVLVAQALEYAISIYKY*YGSIDE
Trigger: CTCATCAATGGAGCCATAGCAGTATTTGTATATGCT...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGACCAGAAAACACCATaGAGATACCAAAAATACTGC +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQDQKTP*RYQKYC
Trigger: GCAGTATTTTTGGTATCTGCATGGTGTTTTCTGGTC...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTCAATGGCCATCACACTaGCTAGAAGAAGTGGGCACA +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCQWPSH*LEEVGT
Trigger: TGTGCCCACTTCTTCTAGGCAGTGTGATGGCCATTG...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR GCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGCCAGACCTGGAATATaGAGAGGTTGTTATAACAAA +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQARPGI*RGCYNK
Trigger: TTTGTTATAACAACCTCTGCATATTCCAGGTCTGGC...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTGTCAGGCAACCTGTCTaGCAGACCTGGAATATGCAG +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIVRQPV*QTWNMQ
Trigger: CTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGAC...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATTGCACATGGCCATGTTaGAAGATCTCCTCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ANILCTYHWHVASVCLHYCTWPC*KISSSQ
Trigger: CTGACTTGAGGAGATCTTGCAACATGGCCATGTGCA...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAACAAAGGACATTTGATTaGTCAAAGCGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQQRTFD*SKRIHS
Trigger: AGAATGGATCCGCTTTGACCAATCAAATGTCCTTTG...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCCTTTGCACCTATCATTaGCATGTAGCTTCGGTTTGT +
Preference number: 4 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLLCTYH*HVASVC
Trigger: ACAAACCGAAGCTACATGCCAATGATAGGTGCAAAG...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTCTGATATGCCTTCATaGGAATGGCGATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFSDMPS*EWRWQG
Trigger: GCCTTGCCATCGCCATTCTCATGAAGGCATATCAGA...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR TCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTTCTGATATGCCTTCATaGGAATGGCGATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFISDMPS*EWRWQG
Trigger: GCCTTGCCATCGCCATTCTCATGAAGGCATATCAGA...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR TCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAACAGGTTTCCAGAGAATaGTTTCCATTTATTCCAATG +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQQVSRE*FPFIPM
Trigger: CATTGGAATAAATGGAAATCATTCTCTGGAAACCTG...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTATCCCTCTCAAAACTGTaGAGGATTGCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLSLSKL*RIAVQT
Trigger: TGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGA...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCCAAAAGCAGAAACGATaGCTTGGACTTCTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLQKQKR*LGLLSK
Trigger: TTTAGACAGAAGTCCAAGGCATCGTTTCTGCTTTTG...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGTTTCCAAGAGTTTCTTCTCCATaGCTCTCCCCAGTCAAAATA +
Preference number: 4 (lower is better)
Translates to: FDSMLPFGEQKVLFHRFPRVSSP*LSPVKI
Trigger: TATTTTGACTGGGGAGAGGCATGGAGAAGAAACTCT...TGGAAACCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370756.3
CDS-3UTR GCA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCCTCTTAAGTCAGATGTaGACATTGTTGCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: IASLPLLVLVAQALEYAILLSQM*TLLHLF
Trigger: AAACAAATGCAACAATGTGCACATCTGACTTAAGAG...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATAAAACTGTGCAGGATTaGAGTCCAGACATATGGCCA +
Preference number: 4 (lower is better)
Translates to: ANILCTYHWHVASVCLHYKTVQD*SPDIWP
Trigger: TGGCCATATGTCTGGACTGCAATCCTGCACAGTTTT...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS-3UTR CCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTAGCCGGTTTTCCGTCTaGCAGGTTGTGTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCSRFSV*QVVFER
Trigger: TCTTTCAAACACAACCTGCCAGACGGAAAACCGGCT...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTCCTGTCTGCCAGACCTaGAATATGCAGAGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCPVCQT*NMQRLL
Trigger: TAACAACCTCTGCATATTCCAGGTCTGGCAGACAGG...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGTTTCCAGAAATATTGGTTTTGTaGCTCCAATACACCGCTCAA +
Preference number: 4 (lower is better)
Translates to: FDSMLPFGEQKVLFHRFPEILVL*LQYTAQ
Trigger: TTGAGCGGTGTATTGGAGTCACAAAACCAATATTTC...TGGAAACCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR TCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCCTACATGATGAAGCCTaGATTTTCCAGTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLLHDEA*IFQLGY
Trigger: GTAGCCTAACTGGAAAATTCAGGCTTCATCATGTAG...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR GCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTTCCCTCTCAAAACTGTaGAGGATTGCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFISLSKL*RIAVQT
Trigger: TGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGA...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR GCA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCTCTAAATCTCTGATATaGCTTCATGAGAATGGCGAT +
Preference number: 4 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLSKSLI*LHENGD
Trigger: ATCGCCATTCTCATGAAGGCATATCAGAGATTTAGA...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CTAAGATTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGGATTTGATTCCATGTTaGCATTCGGAGAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LRFDSMLPFGEQKVLFHRDLIPC*HSESKK
Trigger: CTTTTTGCTCTCCGAATGGCAACATGGAATCAAATC...CCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR GCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATTTTCACTATGCAGGCTaGATTAAGATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ANILCTYHWHVASVCLHYFHYAG*IKMFSG
Trigger: GCCAGAGAACATCTTAATGCAGCCTGCATAGTGAAA...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTGCACATGGCCATGTTaGAAGATCTCCTCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFCTWPC*KISSSQ
Trigger: CTGACTTGAGGAGATCTTGCAACATGGCCATGTGCA...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTCACTCCTTAAAGCCTTaGACATGGCCATGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFHSLKP*TWPCCK
Trigger: CTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTG...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCCTCTTAAGTCAGATGTaGACATTGTTGCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGLLSQM*TLLHLF
Trigger: AAACAAATGCAACAATGTGCACATCTGACTTAAGAG...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAAATCGCCAAGCTACATaGAACACATATAATAACAGA +
Preference number: 4 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQNRQAT*NTYNNR
Trigger: TCTGTTATTATATGTGTTGCATGTAGCTTGGCGATT...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTAGCCGGTTTTCCGTCTaGCAGGTTGTGTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFSRFSV*QVVFER
Trigger: TCTTTCAAACACAACCTGCCAGACGGAAAACCGGCT...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CCA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTCAATACACCGCTCAATaGCCATCACACTGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFQYTAQ*PSHCLE
Trigger: TTCTAGGCAGTGTGATGGCCATTGAGCGGTGTATTG...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTAGCCAGGGTGACATCATaGCAATACAGCAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLARVTS*QYSKNS
Trigger: AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGC...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTTGCCATTCACTGCAAAGGACATTTaGTTGGTCAAAGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: FVEEYIPKDLRFDSMLPFTAKDI*LVKADP
Trigger: TGGATCCGCTTTGACCAATCAAATGTCCTTTGCAGT...GAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR TCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATGAAATATTGGTTTTGTaGCTCCAATACACCGCTCAA +
Preference number: 4 (lower is better)
Translates to: ANILCTYHWHVASVCLHYEILVL*LQYTAQ
Trigger: TTGAGCGGTGTATTGGAGTCACAAAACCAATATTTC...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCTATCTTCCCAGTCTTTaGTGTCTTCTGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLYLPSL*CLLCCR
Trigger: TCTACAACACAGAAGACATCAAAGACTGGGAAGATA...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR TCA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTTGCCATTCTTTCTCTGCAACTGGTaGCTCAGAAATAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: FVEEYIPKDLRFDSMLPFFLCNW*LRNSSN
Trigger: GTTGCTGCTATTTCTGAGTCACCAGTTGCAGAGAAA...GAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR TCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTACTACATGATGAAGCCTaGATTTTCCAGTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLLHDEA*IFQLGY
Trigger: GTAGCCTAACTGGAAAATTCAGGCTTCATCATGTAG...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCTATAACAAACCATCATaGATTCTGGGTGTCATGACC +
Preference number: 4 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLYNKPS*ILGVMT
Trigger: GGTCATGACACCCAGAATTCATGATGGTTTGTTATA...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTAAAAACTGTGCAGGATTaGAGTCCAGACATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLKTVQD*SPDILS
Trigger: TGACAAGATGTCTGGACTGCAATCCTGCACAGTTTT...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR GCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCCAAAAGCAGAAACGATaGCTTGGACTTCTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLQKQKR*LGLLSK
Trigger: TTTAGACAGAAGTCCAAGGCATCGTTTCTGCTTTTG...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR GCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTAAGTGCTTGGCAAATTaGCAGTCTTCCCCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIKCLAN*QSSPLS
Trigger: ACTAAGAGGGGAAGACTGGCAATTTGCCAAGCACTT...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCATAATAATCCCCAAGTaGTTGGCAAATTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLIIIPK*LANCQS
Trigger: AGACTGGCAATTTGCCAAGCACTTGGGGATTATTAT...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCGCTCCATTGATGAGATaGCCAAAGAAATCAGTGATT +
Preference number: 4 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLAPLMR*PKKSVI
Trigger: AATCACTGATTTCTTTGGCCATCTCATCAATGGAGC...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTACTCCACAGCATTGACTaGCAAGCTTATAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLLHSID*QAYRDS
Trigger: AGAATCTCTATAAGCTTGCCAGTCAATGCTGTGGAG...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTTGCCATTCTTAAAGCCTTGCACATaGCCATGTTGCAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: FVEEYIPKDLRFDSMLPFLKPCT*PCCKIS
Trigger: GGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAA...GAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370756.3
CDS-3UTR CCA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATCATTGTAACCAGAAATaGGCTCCAACAAATACAGGA +
Preference number: 4 (lower is better)
Translates to: ANILCTYHWHVASVCLHYHCNQK*APTNTG
Trigger: TCCTGTATTTGTTGGAGCCCATTTCTGGTTACAATG...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTATATCTTCCCAGTCTTTaGTGTCTTCTGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLYLPSL*CLLCCR
Trigger: TCTACAACACAGAAGACATCAAAGACTGGGAAGATA...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTAGCTACAGAGCGGTaGTCTCAAAATAACCATTTC +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCLATER*SQNNHF
Trigger: GAAATGGTTATTTTGAGATCACCGCTCTGTAGCTAA...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGTATGCAAATAGAGTTTCTTCTCCATaGCTCTCCCCAGTCAAAATA +
Preference number: 4 (lower is better)
Translates to: WEVSKATLFMLAGEVYANRVSSP*LSPVKI
Trigger: TATTTTGACTGGGGAGAGGCATGGAGAAGAAACTCT...ATTTGCATACACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR GCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTAGAGTTTCTTCTCCATaGCTCTCCCCAGTCAAAATA +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIRVSSP*LSPVKI
Trigger: TATTTTGACTGGGGAGAGGCATGGAGAAGAAACTCT...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTGAGACACTAGCTGTTTaGAATTGTTCATGGACATTG +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCETLAV*NCSWTL
Trigger: CAATGTCCATGAACAATTCCAAACAGCTAGTGTCTC...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTCTCCACAGCATTGACTaGCAAGCTTATAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFILHSID*QAYRDS
Trigger: AGAATCTCTATAAGCTTGCCAGTCAATGCTGTGGAG...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR TCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTCTGTCTAAATCTCTaGTATGCCTTCATGAGAATG +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCFCLNL*YAFMRM
Trigger: CATTCTCATGAAGGCATATCAGAGATTTAGACAGAA...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR TCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTATTCTGTCTAAATCTCTaGTATGCCTTCATGAGAATG +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLFCLNL*YAFMRM
Trigger: CATTCTCATGAAGGCATATCAGAGATTTAGACAGAA...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR TCA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTGAAATATTGGTTTTGTaGCTCCAATACACCGCTCAA +
Preference number: 4 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFEILVL*LQYTAQ
Trigger: TTGAGCGGTGTATTGGAGTCACAAAACCAATATTTC...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR TCA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTCCTATTTGTCAAATATaGCAAGAATGGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFPICQI*QEWAHS
Trigger: AGAATGGGCCCATTCTTGTCATATTTGACAAATAGG...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTATCTAAATCTCTGATATaGCTTCATGAGAATGGCGAT +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLSKSLI*LHENGD
Trigger: ATCGCCATTCTCATGAAGGCATATCAGAGATTTAGA...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR GCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTAGCATATACAAATACTaGTATGGCTCCATTGATGAG +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCSIYKY*YGSIDE
Trigger: CTCATCAATGGAGCCATAGCAGTATTTGTATATGCT...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR GCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTGACCAGAAAACACCATaGAGATACCAAAAATACTGC +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIDQKTP*RYQKYC
Trigger: GCAGTATTTTTGGTATCTGCATGGTGTTTTCTGGTC...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR GCA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTGATTTGATTCCATGTTaGCATTCGGAGAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFDLIPC*HSESKK
Trigger: CTTTTTGCTCTCCGAATGGCAACATGGAATCAAATC...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR GCA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCCTCTTAAGTCAGATGTaGACATTGTTGCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLLLSQM*TLLHLF
Trigger: AAACAAATGCAACAATGTGCACATCTGACTTAAGAG...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTTGCCATTCCAAAGGACATTTGATTaGTCAAAGCGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: FVEEYIPKDLRFDSMLPFQRTFD*SKRIHS
Trigger: AGAATGGATCCGCTTTGACCAATCAAATGTCCTTTG...GAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR CCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTCATTGTAACCAGAAATaGGCTCCAACAAATACAGGA +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIHCNQK*APTNTG
Trigger: TCCTGTATTTGTTGGAGCCCATTTCTGGTTACAATG...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CCA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTCTAAACCTGGAGGTTTaGGAAATCAGATTTCTATCT +
Preference number: 4 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCLNLEV*EIRFLS
Trigger: AGATAGAAATCTGATTTCCCAAACCTCCAGGTTTAG...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR TCA 90 bp TGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGTATGCAAATTTCTGTCTAAATCTCTaGTATGCCTTCATGAGAATG +
Preference number: 4 (lower is better)
Translates to: WEVSKATLFMLAGEVYANFCLNL*YAFMRM
Trigger: CATTCTCATGAAGGCATATCAGAGATTTAGACAGAA...ATTTGCATACACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR GCA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTTCTAAATCTCTGATATaGCTTCATGAGAATGGCGAT +
Preference number: 4 (lower is better)
Translates to: VYLPLAKTSEKCTVILFISKSLI*LHENGD
Trigger: ATCGCCATTCTCATGAAGGCATATCAGAGATTTAGA...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR GCA 90 bp TTCGTAGAAGAATATATACCCAAGGATCTAAGATTTGATTCCATGTTGCCATTCAGCATATACAAATACTaGTATGGCTCCATTGATGAG +
Preference number: 4 (lower is better)
Translates to: FVEEYIPKDLRFDSMLPFSIYKY*YGSIDE
Trigger: CTCATCAATGGAGCCATAGCAGTATTTGTATATGCT...GAATGGCAACATGGAATCAAATCTTAGATCCTTGGGTATATATTCTTCTACGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR GCA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTAAATCGCCAAGCTACATaGAACACATATAATAACAGA +
Preference number: 4 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLNRQAT*NTYNNR
Trigger: TCTGTTATTATATGTGTTGCATGTAGCTTGGCGATT...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS TCA 90 bp GCGCCGCCGCTGCCTCAAGTTCCACCGATCCCAGCGCGGAGATCCTaGTCGGGCGCCGGCTGTGGTCCAGCCGCTCGTCCCCTCCGCGCA +
Preference number: 5 (lower is better)
Translates to: APPLPQVPPIPARRS*SGAGCGPAARPLRA
Trigger: TGCGCGGAGGGGACGAGCGGCTGGACCACAGCCGGCGCCCGATCAGGATCTCCGCGCTGGGATCGGTGGAACTTGAGGCAGCGGCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS GCA 90 bp CGCCAGCCGGGCTCTCTGAGGAGCAGAAGACGGAGCCGCTCGGTGTaGCATGGCGCCCCGCGCCGCCGCTGCCTCAAGTTCCACCGATCC +
Preference number: 5 (lower is better)
Translates to: RQPGSLRSRRRSRSV*HGAPRRRCLKFHRS
Trigger: GGATCGGTGGAACTTGAGGCAGCGGCGGCGCGGGGCGCCATGGCACACCGAGCGGCTCCGTCTTCTGCTCCTCAGAGAGCCCGGCTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS CCA 90 bp GCCGGGCTCTCTGAGGAGCAGAAGACGGAGCCGCTCGGTGTGCCATaGCGCCCCGCGCCGCCGCTGCCTCAAGTTCCACCGATCCCAGCG +
Preference number: 5 (lower is better)
Translates to: AGLSEEQKTEPLGVP*RPAPPLPQVPPIPA
Trigger: CGCTGGGATCGGTGGAACTTGAGGCAGCGGCGGCGCGGGGCGCCATGGCACACCGAGCGGCTCCGTCTTCTGCTCCTCAGAGAGCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS GCA 90 bp AGAAGACGGAGCCGCTCGGTGTGCCATGGCGCCCCGCGCCGCCGCTaGCTCAAGTTCCACCGATCCCAGCGCGGAGATCCTGATCGGGCG +
Preference number: 5 (lower is better)
Translates to: RRRSRSVCHGAPRRR*LKFHRSQRGDPDRA
Trigger: CGCCCGATCAGGATCTCCGCGCTGGGATCGGTGGAACTTGAGGCAGCGGCGGCGCGGGGCGCCATGGCACACCGAGCGGCTCCGTCTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS CCA 90 bp AGTTCCACCGATCCCAGCGCGGAGATCCTGATCGGGCGCCGGCTGTaGTCCAGCCGCTCGTCCCCTCCGCGCACTCGTTCCCTTAGCGCG +
Preference number: 5 (lower is better)
Translates to: SSTDPSAEILIGRRL*SSRSSPPRTRSLSA
Trigger: CGCGCTAAGGGAACGAGTGCGCGGAGGGGACGAGCGGCTGGACCACAGCCGGCGCCCGATCAGGATCTCCGCGCTGGGATCGGTGGAACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CAA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCTGCAGTCCAGACATCTaGTCATCCCAGGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: IASLPLLVLVAQALEYAICSPDI*SSQAAS
Trigger: GCTGGCGGCCTGGGATGACAAGATGTCTGGACTGCA...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAATGCAGTCCAGACATCTaGTCATCCCAGGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQCSPDI*SSQAAS
Trigger: GCTGGCGGCCTGGGATGACAAGATGTCTGGACTGCA...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR CAA 90 bp CTGGAGCCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTTGTTTGATCCGATGGCAAGGCTGTTaGACAAGATTCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: LEPQVSRLSQHPCISCLIRWQGC*TRFPLS
Trigger: TGACAGTGGGAATCTTGTCAAACAGCCTTGCCATCG...GATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGGCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS GCA 90 bp AAAGCCAACCACTCAAGTCATCTCCCTCTCAAAACTGTGCAGGATTaGAGTCCAGACATATGGCCAGAGTGTCCTATGTCCTCCAAACGC +
Preference number: 5 (lower is better)
Translates to: KANHSSHLPLKTVQD*SPDIWPECPMSSKR
Trigger: GCGTTTGGAGGACATAGGACACTCTGGCCATATGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGAGATGACTTGAGTGGTTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS-3UTR CAA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTCTTAACCAGGCTGAGTaGGCTGGTCTGGCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSLNQAE*AGLAVD
Trigger: ATCTACAGCCAGACCAGCCAACTCAGCCTGGTTAAG...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS-3UTR CAA 90 bp TTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGTTTCCATGCAGTCCAGACATCTaGTCATCCCAGGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: FDSMLPFGEQKVLFHRFPCSPDI*SSQAAS
Trigger: GCTGGCGGCCTGGGATGACAAGATGTCTGGACTGCA...TGGAAACCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR CAA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCTCTGGCAGGTTGTGTTaGAAAGAAGCGCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: IASLPLLVLVAQALEYAISGRLC*KEAQLQ
Trigger: CTGCAGCTGCGCTTCTTTCAAACACAACCTGCCAGA...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAACGATGGCAAGGCTGTTaGACAAGATTCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQERWQGC*TRFPLS
Trigger: TGACAGTGGGAATCTTGTCAAACAGCCTTGCCATCG...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CTGGAGCCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTTGTTTGATCTACTGCAAAGGACATTaGATTGGTCAAAGCGGATCC +
Preference number: 5 (lower is better)
Translates to: LEPQVSRLSQHPCISCLIYCKGH*IGQSGS
Trigger: GGATCCGCTTTGACCAATCAAATGTCCTTTGCAGTA...GATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGGCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp CTGGAGCCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTTGTTTGATCATGATGAGATCTGCCTaGTCTGTGCTGCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: LEPQVSRLSQHPCISCLIMMRSA*SVLLTF
Trigger: AAAAGTCAGCAGCACAGACAAGGCAGATCTCATCAT...GATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp TTGCAGGGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATATCACTCCTTAAAGCCTaGCACATGGCCATGTTGCAA +
Preference number: 5 (lower is better)
Translates to: LQGQATCLPDLEYAEVVISLLKA*HMAMLQ
Trigger: TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGA...TATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACCCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TCTGAGCCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCTTTCCGTCTGGCAGGTaGTGTTTGAAAGAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: SEPAPMYKLFDPLSCCLSFPSGR*CLKEAQ
Trigger: CTGCGCTTCTTTCAAACACAACCTGCCAGACGGAAA...GGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACATGCACTCCACAGCATaGACTGGCAAGCTTATAGAG +
Preference number: 5 (lower is better)
Translates to: GQATCLPDLEYAEVVITNMHSTA*TGKLIE
Trigger: CTCTATAAGCTTGCCAGTCAATGCTGTGGAGTGCAT...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAAATAATCCCCAAGTGCTaGGCAAATTGCCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEIIPKC*ANCQSS
Trigger: GGAAGACTGGCAATTTGCCAAGCACTTGGGGATTAT...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS TCA 90 bp CTGGCCAAAAGCAGAAACGATGCCTTGGACTTCTGTCTAAATCTCTaGTATGCCTTCATGAGAATGGCGATGGCAAGGCTGTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: LAKSRNDALDFCLNL*YAFMRMAMARLFDK
Trigger: CTTGTCAAACAGCCTTGCCATCGCCATTCTCATGAAGGCATATCAGAGATTTAGACAGAAGTCCAAGGCATCGTTTCTGCTTTTGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTCAAAACTGTGCAGGATaGCAGTCCAGACATCTTGTC +
Preference number: 5 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSQNCAG*QSRHLV
Trigger: GACAAGATGTCTGGACTGCAATCCTGCACAGTTTTG...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000370757.8
CDS-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAATTTCCGTCTGGCAGGTaGTGTTTGAAAGAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQFPSGR*CLKEAQ
Trigger: CTGCGCTTCTTTCAAACACAACCTGCCAGACGGAAA...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACACTGCTATGGCTCCATaGATGAGATGGCCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: GQATCLPDLEYAEVVITNTAMAP*MRWPKK
Trigger: TTTCTTTGGCCATCTCATCAATGGAGCCATAGCAGT...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAAATGATGAGATCTGCCTaGTCTGTGCTGCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQEMMRSA*SVLLTF
Trigger: AAAAGTCAGCAGCACAGACAAGGCAGATCTCATCAT...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCATGCACTCCACAGCATaGACTGGCAAGCTTATAGAG +
Preference number: 5 (lower is better)
Translates to: IASLPLLVLVAQALEYAIMHSTA*TGKLIE
Trigger: CTCTATAAGCTTGCCAGTCAATGCTGTGGAGTGCAT...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAGATCTCCTCAAGTTCTTTGCACCTATCATaGGCATGTAGCTTCGGTTTG +
Preference number: 5 (lower is better)
Translates to: LSHSLKPCTWPCCKISSSSLHLS*ACSFGL
Trigger: CAAACCGAAGCTACATGCCAATGATAGGTGCAAAGA...ACTTGAGGAGATCTTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCCAAAACTGTGCAGGATaGCAGTCCAGACATATGGCC +
Preference number: 5 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGQNCAG*QSRHMA
Trigger: GGCCATATGTCTGGACTGCAATCCTGCACAGTTTTG...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS-3UTR CAA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCCGATGGCAAGGCTGTTaGACAAGATTCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLRWQGC*TRFPLS
Trigger: TGACAGTGGGAATCTTGTCAAACAGCCTTGCCATCG...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTTACTGCAAAGGACATTaGATTGGTCAAAGCGGATCC +
Preference number: 5 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSYCKGH*IGQSGS
Trigger: GGATCCGCTTTGACCAATCAAATGTCCTTTGCAGTA...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAATGCACTCCACAGCATaGACTGGCAAGCTTATAGAG +
Preference number: 5 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQMHSTA*TGKLIE
Trigger: CTCTATAAGCTTGCCAGTCAATGCTGTGGAGTGCAT...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACAATGCACTCCACAGCATaGACTGGCAAGCTTATAGAG +
Preference number: 5 (lower is better)
Translates to: QHPCISCLIHFHVASPSTMHSTA*TGKLIE
Trigger: CTCTATAAGCTTGCCAGTCAATGCTGTGGAGTGCAT...TGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCTTGCACATGGCCATGTaGCAAGATCTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: FTMQAALRCSLANRPSKGLHMAM*QDLLKS
Trigger: TGACTTGAGGAGATCTTGCAACATGGCCATGTGCAA...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCTCACTCCTTAAAGCCTaGCACATGGCCATGTTGCAA +
Preference number: 5 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGSLLKA*HMAMLQ
Trigger: TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGA...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS GCA 90 bp CCATCACACTGCCTAGAAGAAGTGGGCACAGACCAGAAAACACCATaGAGATACCAAAAATACTGCAAAGGACATTTGATTGGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: PSHCLEEVGTDQKTP*RYQKYCKGHLIGQS
Trigger: GCTTTGACCAATCAAATGTCCTTTGCAGTATTTTTGGTATCTGCATGGTGTTTTCTGGTCTGTGCCCACTTCTTCTAGGCAGTGTGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCTCTGGCAGGTTGTGTTaGAAAGAAGCGCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLSGRLC*KEAQLQ
Trigger: CTGCAGCTGCGCTTCTTTCAAACACAACCTGCCAGA...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAACTGCTATGGCTCCATaGATGAGATGGCCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQTAMAP*MRWPKK
Trigger: TTTCTTTGGCCATCTCATCAATGGAGCCATAGCAGT...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GGTCAGGCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACATTCCTGTGATTGCATaGCACAACAATGAAACACCA +
Preference number: 5 (lower is better)
Translates to: GQATCLPDLEYAEVVITNIPVIA*HNNETP
Trigger: TGGTGTTTCATTGTTGTGCAATGCAATCACAGGAAT...GTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGCCTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAATGATGAGATCTGCCTaGTCTGTGCTGCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQMMRSA*SVLLTF
Trigger: AAAAGTCAGCAGCACAGACAAGGCAGATCTCATCAT...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TCTCCTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAAAGATTTGATTCCATGTaGCCATTCGGAGAGCAAAAA +
Preference number: 5 (lower is better)
Translates to: SPQVSTHGQGDIMAIQQERFDSM*PFGEQK
Trigger: TTTTTGCTCTCCGAATGGCAACATGGAATCAAATCT...TTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTTGTTTGATCCACTTTTGTGTCTACCTCCCATaGGCAAAAACAAGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: PQVSRLSQHPCISCLIHFCVYLP*AKTSEK
Trigger: TTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACA...AAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTCATGGCATTATTTTATaGTGTCTACCTCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSHGIIL*CLPPIG
Trigger: GCCAATGGGAGGTAGACACAATAAAATAATGCCATG...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTGCATGTAGCTTCGGTTaGTTTGCATTATCCATGGTA +
Preference number: 5 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSACSFG*FALSMV
Trigger: TACCATGGATAATGCAAACAAACCGAAGCTACATGC...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CCTCAGGTGTCACGTCTGAGCCAGCACCCATGTATAAGTTGTTTGATCCACTTTTTCTGTCATTTCTCGTaGAGTGTCTTATCGCTATGT +
Preference number: 5 (lower is better)
Translates to: PQVSRLSQHPCISCLIHFFCHFS*SVLSLC
Trigger: ACATAGCGATAAGACACTCAACGAGAAATGACAGAA...AAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGACGTGACACCTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS GCA 90 bp TCTGAGCCAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTaGCTCTCCATCCACACCTTGTTTTTCTGTCATTTCTCGTTGAGT +
Preference number: 5 (lower is better)
Translates to: SEPAPMYKLFDPLSC*LSIHTLFFCHFSLS
Trigger: ACTCAACGAGAAATGACAGAAAAACAAGGTGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTGGCTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTCTGGCAGGTTGTGTTaGAAAGAAGCGCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCSGRLC*KEAQLQ
Trigger: CTGCAGCTGCGCTTCTTTCAAACACAACCTGCCAGA...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATCGATGGCAAGGCTGTTaGACAAGATTCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: ANILCTYHWHVASVCLHYRWQGC*TRFPLS
Trigger: TGACAGTGGGAATCTTGTCAAACAGCCTTGCCATCG...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTTGTGTCTACCTCCCATaGGCAAAAACAAGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSCVYLP*AKTSEK
Trigger: TTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACA...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATCATGGCATTATTTTATaGTGTCTACCTCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: ATCLPDLEYAEVVITNHHHGIIL*CLPPIG
Trigger: GCCAATGGGAGGTAGACACAATAAAATAATGCCATG...ATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACACATGGCATTATTTTATaGTGTCTACCTCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: QHPCISCLIHFHVASPSTHGIIL*CLPPIG
Trigger: GCCAATGGGAGGTAGACACAATAAAATAATGCCATG...TGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp GCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATGCATGTAGCTTCGGTTaGTTTGCATTATCCATGGTA +
Preference number: 5 (lower is better)
Translates to: ATCLPDLEYAEVVITNHHACSFG*FALSMV
Trigger: TACCATGGATAATGCAAACAAACCGAAGCTACATGC...ATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS GCA 90 bp AAAGAAATCAGTGATTACCAGGCCACTGGCCAAAAGCAGAAACGATaGCTTGGACTTCTGTCTAAATCTCTGATATGCCTTCATGAGAAT +
Preference number: 5 (lower is better)
Translates to: KEISDYQATGQKQKR*LGLLSKSLICLHEN
Trigger: ATTCTCATGAAGGCATATCAGAGATTTAGACAGAAGTCCAAGGCATCGTTTCTGCTTTTGGCCAGTGGCCTGGTAATCACTGATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS GCA 90 bp GAAGTGGGCACAGACCAGAAAACACCATGCAGATACCAAAAATACTaGAAAGGACATTTGATTGGTCAAAGCGGATCCATTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: EVGTDQKTPCRYQKY*KGHLIGQSGSILYQ
Trigger: CTGATAAAGAATGGATCCGCTTTGACCAATCAAATGTCCTTTGCAGTATTTTTGGTATCTGCATGGTGTTTTCTGGTCTGTGCCCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS CCA 90 bp TTATCAGAAGCATATACAAATACTGCTATGGCTCCATTGATGAGATaGCCAAAGAAATCAGTGATTACCAGGCCACTGGCCAAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: LSEAYTNTAMAPLMR*PKKSVITRPLAKSR
Trigger: TCTGCTTTTGGCCAGTGGCCTGGTAATCACTGATTTCTTTGGCCATCTCATCAATGGAGCCATAGCAGTATTTGTATATGCTTCTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTCTGGCAGGTTGTGTTaGAAAGAAGCGCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFSGRLC*KEAQLQ
Trigger: CTGCAGCTGCGCTTCTTTCAAACACAACCTGCCAGA...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTATTTCCGTCTGGCAGGTaGTGTTTGAAAGAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLFPSGR*CLKEAQ
Trigger: CTGCGCTTCTTTCAAACACAACCTGCCAGACGGAAA...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CTAAGATTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGACTGCTATGGCTCCATaGATGAGATGGCCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: LRFDSMLPFGEQKVLFHRTAMAP*MRWPKK
Trigger: TTTCTTTGGCCATCTCATCAATGGAGCCATAGCAGT...CCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370756.3
ENST00000497923.5
CDS-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAATTCCTGTGATTGCATaGCACAACAATGAAACACCA +
Preference number: 5 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQIPVIA*HNNETP
Trigger: TGGTGTTTCATTGTTGTGCAATGCAATCACAGGAAT...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TTTGTCAAATATGACAAGAATGGGCCCATTCTAGATAGGATTGCAGGGTCAGGCAGATTTGATTCCATGTaGCCATTCGGAGAGCAAAAA +
Preference number: 5 (lower is better)
Translates to: FVKYDKNGPILDRIAGSGRFDSM*PFGEQK
Trigger: TTTTTGCTCTCCGAATGGCAACATGGAATCAAATCT...GCCTGACCCTGCAATCCTATCTAGAATGGGCCCATTCTTGTCATATTTGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CTCAAGTCAGTACACATGGCCAGGGTGACATCATGGCAATACAGCAAGAATTCTTGTAGGCAGTCCTATTaGTCAAATATGACAAGAATG +
Preference number: 5 (lower is better)
Translates to: LKSVHMARVTSWQYSKNSCRQSY*SNMTRM
Trigger: CATTCTTGTCATATTTGACAAATAGGACTGCCTACA...AGAATTCTTGCTGTATTGCCATGATGTCACCCTGGCCATGTGTACTGACTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATATAATCCCCAAGTGCTaGGCAAATTGCCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ANILCTYHWHVASVCLHYIIPKC*ANCQSS
Trigger: GGAAGACTGGCAATTTGCCAAGCACTTGGGGATTAT...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp ATTGCCAGTCTTCCCCTCTTAGTACTGGTAGCACAGGCTTTAGAATATGCCATCAACAAGTCCTCTTATTaGGGTTCTAAACTCAGAGTA +
Preference number: 5 (lower is better)
Translates to: IASLPLLVLVAQALEYAINKSSY*GSKLRV
Trigger: TACTCTGAGTTTAGAACCCAAATAAGAGGACTTGTT...GATGGCATATTCTAAAGCCTGTGCTACCAGTACTAAGAGGGGAAGACTGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCGTATGCAAATGTGTGTaGCCTCCAGATGGATATTCT +
Preference number: 5 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLVCKCV*PPDGYS
Trigger: AGAATATCCATCTGGAGGCAACACACATTTGCATAC...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CAA 90 bp GCTGCCCCCTGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGATTACAAGACCATGCTaGTCAGTACTTACAAAGAGT +
Preference number: 5 (lower is better)
Translates to: AAPWEVSKATLFMLAGEVITRPC*SVLTKS
Trigger: ACTCTTTGTAAGTACTGACAAGCATGGTCTTGTAAT...CACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCAGGGGGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CAA 90 bp CAGCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACACCATGTATAAGTTGTTaGATCCACTTTCATGTTGCC +
Preference number: 5 (lower is better)
Translates to: QHPCISCLIHFHVASPSTPCISC*IHFHVA
Trigger: GGCAACATGAAAGTGGATCAAACAACTTATACATGG...TGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp GTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTTATTTTTCCGTCTGGCAGGTaGTGTTTGAAAGAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: VYLPLAKTSEKCTVILFIFPSGR*CLKEAQ
Trigger: CTGCGCTTCTTTCAAACACAACCTGCCAGACGGAAA...AATAAACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCATTCCTGTGATTGCATaGCACAACAATGAAACACCA +
Preference number: 5 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLIPVIA*HNNETP
Trigger: TGGTGTTTCATTGTTGTGCAATGCAATCACAGGAAT...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATATGATGAGATCTGCCTaGTCTGTGCTGCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: ANILCTYHWHVASVCLHYMMRSA*SVLLTF
Trigger: AAAAGTCAGCAGCACAGACAAGGCAGATCTCATCAT...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GCAACCTGTCTGCCAGACCTGGAATATGCAGAGGTTGTTATAACAAACCATCATTGTAGGCAGTCCTATTaGTCAAATATGACAAGAATG +
Preference number: 5 (lower is better)
Translates to: ATCLPDLEYAEVVITNHHCRQSY*SNMTRM
Trigger: CATTCTTGTCATATTTGACAAATAGGACTGCCTACA...ATGATGGTTTGTTATAACAACCTCTGCATATTCCAGGTCTGGCAGACAGGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TTCACTATGCAGGCTGCATTAAGATGTTCTCTGGCAAATAGGCCAAGTAAAGGCTGTAGGCAGTCCTATTaGTCAAATATGACAAGAATG +
Preference number: 5 (lower is better)
Translates to: FTMQAALRCSLANRPSKGCRQSY*SNMTRM
Trigger: CATTCTTGTCATATTTGACAAATAGGACTGCCTACA...GCCTTTACTTGGCCTATTTGCCAGAGAACATCTTAATGCAGCCTGCATAGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCAAGGTAAAGCACCTTTaGCCAATATTCTTTGCACCT +
Preference number: 5 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLKVKHL*PIFFAP
Trigger: AGGTGCAAAGAATATTGGCAAAAGGTGCTTTACCTT...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTAATAATCCCCAAGTGCTaGGCAAATTGCCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLIIPKC*ANCQSS
Trigger: GGAAGACTGGCAATTTGCCAAGCACTTGGGGATTAT...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GATATGTACACATCTCTCTCACTCCTTAAAGCCTTGCACATGGCCATGTTGCAAAAAAGGTCTGATGTTTaGGACTTACCCATAGCTAAT +
Preference number: 5 (lower is better)
Translates to: DMYTSLSLLKALHMAMLQKRSDV*DLPIAN
Trigger: ATTAGCTATGGGTAAGTCCAAAACATCAGACCTTTT...TTGCAACATGGCCATGTGCAAGGCTTTAAGGAGTGAGAGAGATGTGTACATATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCCTCTCCATCCACACCTaGTTTTTCTGTCATTTCTCG +
Preference number: 5 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLLSIHT*FFCHFS
Trigger: CGAGAAATGACAGAAAAACAAGGTGTGGATGGAGAG...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp TGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGTATGCAAATCAAAACTGTGCAGGATaGCAGTCCAGACATCTTGTC +
Preference number: 5 (lower is better)
Translates to: WEVSKATLFMLAGEVYANQNCAG*QSRHLV
Trigger: GACAAGATGTCTGGACTGCAATCCTGCACAGTTTTG...ATTTGCATACACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CAA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTTACTGCAAAGGACATTaGATTGGTCAAAGCGGATCC +
Preference number: 5 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCYCKGH*IGQSGS
Trigger: GGATCCGCTTTGACCAATCAAATGTCCTTTGCAGTA...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp CTAAGATTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGAAGGTAAAGCACCTTTaGCCAATATTCTTTGCACCT +
Preference number: 5 (lower is better)
Translates to: LRFDSMLPFGEQKVLFHRKVKHL*PIFFAP
Trigger: AGGTGCAAAGAATATTGGCAAAAGGTGCTTTACCTT...CCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAATCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370756.3
CDS-3UTR CAA 90 bp TGGGAAGTTAGTAAAGCCACATTATTTATGTTAGCTGGAGAAGTGTATGCAAATTTGCACATGGCCATGTaGCAAGATCTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: WEVSKATLFMLAGEVYANLHMAM*QDLLKS
Trigger: TGACTTGAGGAGATCTTGCAACATGGCCATGTGCAA...ATTTGCATACACTTCTCCAGCTAACATAAATAATGTGGCTTTACTAACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTTGCACATGGCCATGTaGCAAGATCTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFLHMAM*QDLLKS
Trigger: TGACTTGAGGAGATCTTGCAACATGGCCATGTGCAA...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp ACTGCTGTAATTCTAGTTGCCCATCAATGTGCTGAGAAAGAGCCTTTGTTTCTCAACAAGTCCTCTTATTaGGGTTCTAAACTCAGAGTA +
Preference number: 5 (lower is better)
Translates to: TAVILVAHQCAEKEPLFLNKSSY*GSKLRV
Trigger: TACTCTGAGTTTAGAACCCAAATAAGAGGACTTGTT...GAGAAACAAAGGCTCTTTCTCAGCACATTGATGGGCAACTAGAATTACAGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS GCA 90 bp TTGGTCAAAGCGGATCCATTCTTTATCAGAAGCATATACAAATACTaGTATGGCTCCATTGATGAGATGGCCAAAGAAATCAGTGATTAC +
Preference number: 5 (lower is better)
Translates to: LVKADPFFIRSIYKY*YGSIDEMAKEISDY
Trigger: GTAATCACTGATTTCTTTGGCCATCTCATCAATGGAGCCATAGCAGTATTTGTATATGCTTCTGATAAAGAATGGATCCGCTTTGACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTACTGCTATGGCTCCATaGATGAGATGGCCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFTAMAP*MRWPKK
Trigger: TTTCTTTGGCCATCTCATCAATGGAGCCATAGCAGT...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCATTCCTGTGATTGCATaGCACAACAATGAAACACCA +
Preference number: 5 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLIPVIA*HNNETP
Trigger: TGGTGTTTCATTGTTGTGCAATGCAATCACAGGAAT...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp TTTGATTCCATGTTGCCATTCGGAGAGCAAAAAGTGTTGTTTCACAGGTTTCCACCATTTATTCCAATGTaGGCCATTGTAACCTATGTA +
Preference number: 5 (lower is better)
Translates to: FDSMLPFGEQKVLFHRFPPFIPM*AIVTYV
Trigger: TACATAGGTTACAATGGCCAACATTGGAATAAATGG...TGGAAACCTGTGAAACAACACTTTTTGCTCTCCGAATGGCAACATGGAATCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370756.3
CDS-3UTR CAA 90 bp CTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTATTGTGTCTACCTCAGATTTGATTCCATGTaGCCATTCGGAGAGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LKIAFSVTPMALFYCVYLRFDSM*PFGEQK
Trigger: TTTTTGCTCTCCGAATGGCAACATGGAATCAAATCT...GAGGTAGACACAATAAAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTGCATGTAGCTTCGGTTaGTTTGCATTATCCATGGTA +
Preference number: 5 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCACSFG*FALSMV
Trigger: TACCATGGATAATGCAAACAAACCGAAGCTACATGC...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTCTTTGCACCTATCATaGGCATGTAGCTTCGGTTTG +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFSLHLS*ACSFGL
Trigger: CAAACCGAAGCTACATGCCAATGATAGGTGCAAAGA...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTCATGGCATTATTTTATaGTGTCTACCTCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFHGIIL*CLPPIG
Trigger: GCCAATGGGAGGTAGACACAATAAAATAATGCCATG...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp ATTGTGTCTACCTCCCATTGGCAAAAACAAGTGAAAAATGTACAGTTATCCTGTAAGGTAAAGCACCTTTaGCCAATATTCTTTGCACCT +
Preference number: 5 (lower is better)
Translates to: IVSTSHWQKQVKNVQLSCKVKHL*PIFFAP
Trigger: AGGTGCAAAGAATATTGGCAAAAGGTGCTTTACCTT...ACAGGATAACTGTACATTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp GCCAATATTCTTTGCACCTATCATTGGCATGTAGCTTCGGTTTGTTTGCATTATAAAAGGTCTGATGTTTaGGACTTACCCATAGCTAAT +
Preference number: 5 (lower is better)
Translates to: ANILCTYHWHVASVCLHYKRSDV*DLPIAN
Trigger: ATTAGCTATGGGTAAGTCCAAAACATCAGACCTTTT...ATAATGCAAACAAACCGAAGCTACATGCCAATGATAGGTGCAAAGAATATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS TCA 90 bp ACCAGAAAACACCATGCAGATACCAAAAATACTGCAAAGGACATTTaGTTGGTCAAAGCGGATCCATTCTTTATCAGAAGCATATACAAA +
Preference number: 5 (lower is better)
Translates to: TRKHHADTKNTAKDI*LVKADPFFIRSIYK
Trigger: TTTGTATATGCTTCTGATAAAGAATGGATCCGCTTTGACCAATCAAATGTCCTTTGCAGTATTTTTGGTATCTGCATGGTGTTTTCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTGTGTCTACCTCCCATaGGCAAAAACAAGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFCVYLP*AKTSEK
Trigger: TTTTTCACTTGTTTTTGCCAATGGGAGGTAGACACA...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS-3UTR CAA 90 bp TCAGATAACATAGATAACCCTCCTAAGATATGTACACATCTCTCTCACTCCTTAAAAAGGTCTGATGTTTaGGACTTACCCATAGCTAAT +
Preference number: 5 (lower is better)
Translates to: SDNIDNPPKICTHLSHSLKRSDV*DLPIAN
Trigger: ATTAGCTATGGGTAAGTCCAAAACATCAGACCTTTT...TAAGGAGTGAGAGAGATGTGTACATATCTTAGGAGGGTTATCTATGTTATCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTTCTAAACCTGGAGGTTaGGGAAATCAGATTTCTATC +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFSKPGG*GNQISI
Trigger: GATAGAAATCTGATTTCCCAAACCTCCAGGTTTAGA...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTGCACCCATGTATAAGTaGTTTGATCCACTTTCATGT +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFAPMYK*FDPLSC
Trigger: ACATGAAAGTGGATCAAACAACTTATACATGGGTGC...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS-3UTR CAA 90 bp AATAAGACAGATAAGCTCAAAATTGCTTTCAGTGTGACTCCCATGGCATTATTTAACAAGTCCTCTTATTaGGGTTCTAAACTCAGAGTA +
Preference number: 5 (lower is better)
Translates to: NKTDKLKIAFSVTPMALFNKSSY*GSKLRV
Trigger: TACTCTGAGTTTAGAACCCAAATAAGAGGACTTGTT...AAATAATGCCATGGGAGTCACACTGAAAGCAATTTTGAGCTTATCTGTCTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
CDS CCA 72 bp CCCTTAGCGCGGAAACTGCGGGGCGCGCGCGGCTCCTaGGATCCCTCTGCACCTAGCTGCGCTGGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: PLARKLRGARGS*DPSAPSCAGSL
Trigger: CAGGCTGCCAGCGCAGCTAGGTGCAGAGGGATCCCAGGAGCCGCGCGCGCCCCGCAGTTTCCGCGCTAAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370757.8
CDS CCA 72 bp TCTGAGGAGCAGAAGACGGAGCCGCTCGGTGTGCCATaGCGCCCCGCGCCGCCGCTGCCTCAAGTTCCACCG +
Preference number: 6 (lower is better)
Translates to: SEEQKTEPLGVP*RPAPPLPQVPP
Trigger: CGGTGGAACTTGAGGCAGCGGCGGCGCGGGGCGCCATGGCACACCGAGCGGCTCCGTCTTCTGCTCCTCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS TCA 72 bp CTGCCTCAAGTTCCACCGATCCCAGCGCGGAGATCCTaGTCGGGCGCCGGCTGTGGTCCAGCCGCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: LPQVPPIPARRS*SGAGCGPAARP
Trigger: GGGACGAGCGGCTGGACCACAGCCGGCGCCCGATCAGGATCTCCGCGCTGGGATCGGTGGAACTTGAGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS GCA 72 bp CACTCAAGTCATCTCCCTCTCAAAACTGTGCAGGATTaGAGTCCAGACATCTTGTCATCCCAGGCCGCCAGC +
Preference number: 6 (lower is better)
Translates to: HSSHLPLKTVQD*SPDILSSQAAS
Trigger: GCTGGCGGCCTGGGATGACAAGATGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGAGATGACTTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS CAA 72 bp CCACTCAAGTCATCTCCCTCTCAAAACTGTGCAGGATaGCAGTCCAGACATCTTGTCATCCCAGGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: PLKSSPSQNCAG*QSRHLVIPGRQ
Trigger: CTGGCGGCCTGGGATGACAAGATGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGAGATGACTTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS CAA 90 bp AACGCCTGCACTAGTTCTTCAACAGGTGTTCTTAACCAGGCTGAGTaGGCTGGTCTGGCTGTAGATCCCTCCAGGCATACAGCTACATTT +
Preference number: 6 (lower is better)
Translates to: NACTSSSTGVLNQAE*AGLAVDPSRHTATF
Trigger: AAATGTAGCTGTATGCCTGGAGGGATCTACAGCCAGACCAGCCAACTCAGCCTGGTTAAGAACACCTGTTGAAGAACTAGTGCAGGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS GCA 72 bp AAGCCAACCACTCAAGTCATCTCCCTCTCAAAACTGTaGAGGATTGCAGTCCAGACATCTTGTCATCCCAGG +
Preference number: 6 (lower is better)
Translates to: KPTTQVISLSKL*RIAVQTSCHPR
Trigger: CCTGGGATGACAAGATGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGAGATGACTTGAGTGGTTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000497923.5
CDS GCA 72 bp CACTCAAGTCATCTCCCTCTCAAAACTGTGCAGGATTaGAGTCCAGACATATGGCCAGAGTGTCCTATGTCC +
Preference number: 6 (lower is better)
Translates to: HSSHLPLKTVQD*SPDIWPECPMS
Trigger: GGACATAGGACACTCTGGCCATATGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGAGATGACTTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS GCA 72 bp AAGCCAACCACTCAAGTCATCTCCCTCTCAAAACTGTaGAGGATTGCAGTCCAGACATATGGCCAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: KPTTQVISLSKL*RIAVQTYGQSV
Trigger: GACACTCTGGCCATATGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGAGATGACTTGAGTGGTTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS CAA 72 bp CCACTCAAGTCATCTCCCTCTCAAAACTGTGCAGGATaGCAGTCCAGACATATGGCCAGAGTGTCCTATGTC +
Preference number: 6 (lower is better)
Translates to: PLKSSPSQNCAG*QSRHMARVSYV
Trigger: GACATAGGACACTCTGGCCATATGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGAGATGACTTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS CAA 90 bp AAAAGCCAACCACTCAAGTCATCTCCCTCTCAAAACTGTGCAGGATaGCAGTCCAGACATATGGCCAGAGTGTCCTATGTCCTCCAAACG +
Preference number: 6 (lower is better)
Translates to: KSQPLKSSPSQNCAG*QSRHMARVSYVLQT
Trigger: CGTTTGGAGGACATAGGACACTCTGGCCATATGTCTGGACTGCAATCCTGCACAGTTTTGAGAGGGAGATGACTTGAGTGGTTGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370758.5
CDS TCA 72 bp AGCAGAAACGATGCCTTGGACTTCTGTCTAAATCTCTaGTATGCCTTCATGAGAATGGCGATGGCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: SRNDALDFCLNL*YAFMRMAMARL
Trigger: CAGCCTTGCCATCGCCATTCTCATGAAGGCATATCAGAGATTTAGACAGAAGTCCAAGGCATCGTTTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS CAA 90 bp CAGGTTGTGTTTGAAAGAAGCGCAGCTGCAGGAGACACTAGCTGTTaGGAATTGTTCATGGACATTGTTGTGGAGATAAAAGCCAACCAC +
Preference number: 6 (lower is better)
Translates to: QVVFERSAAAGDTSC*ELFMDIVVEIKANH
Trigger: GTGGTTGGCTTTTATCTCCACAACAATGTCCATGAACAATTCCAAACAGCTAGTGTCTCCTGCAGCTGCGCTTCTTTCAAACACAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS GCA 72 bp AGTGATTACCAGGCCACTGGCCAAAAGCAGAAACGATaGCTTGGACTTCTGTCTAAATCTCTGATATGCCTT +
Preference number: 6 (lower is better)
Translates to: SDYQATGQKQKR*LGLLSKSLICL
Trigger: AAGGCATATCAGAGATTTAGACAGAAGTCCAAGGCATCGTTTCTGCTTTTGGCCAGTGGCCTGGTAATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS CAA 72 bp AGAAGCGCAGCTGCAGGAGACACTAGCTGTTTGGAATaGTTCATGGACATTGTTGTGGAGATAAAAGCCAAC +
Preference number: 6 (lower is better)
Translates to: RSAAAGDTSCLE*FMDIVVEIKAN
Trigger: GTTGGCTTTTATCTCCACAACAATGTCCATGAACAATTCCAAACAGCTAGTGTCTCCTGCAGCTGCGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS CAA 90 bp GTGTTTGAAAGAAGCGCAGCTGCAGGAGACACTAGCTGTTTGGAATaGTTCATGGACATTGTTGTGGAGATAAAAGCCAACCACTCAAGT +
Preference number: 6 (lower is better)
Translates to: VFERSAAAGDTSCLE*FMDIVVEIKANHSS
Trigger: ACTTGAGTGGTTGGCTTTTATCTCCACAACAATGTCCATGAACAATTCCAAACAGCTAGTGTCTCCTGCAGCTGCGCTTCTTTCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS CAA 90 bp ATCCATTCTTTATCAGAAGCATATACAAATACTGCTATGGCTCCATaGATGAGATGGCCAAAGAAATCAGTGATTACCAGGCCACTGGCC +
Preference number: 6 (lower is better)
Translates to: IHSLSEAYTNTAMAP*MRWPKKSVITRPLA
Trigger: GGCCAGTGGCCTGGTAATCACTGATTTCTTTGGCCATCTCATCAATGGAGCCATAGCAGTATTTGTATATGCTTCTGATAAAGAATGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS GCA 72 bp GCACCCATGTATAAGTTGTTTGATCCACTTTCATGTTaGCTCTCCATCCACACCTTGTTTTTCTGTCATTTC +
Preference number: 6 (lower is better)
Translates to: APMYKLFDPLSC*LSIHTLFFCHF
Trigger: GAAATGACAGAAAAACAAGGTGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATACATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS CAA 72 bp TTTGAAAGAAGCGCAGCTGCAGGAGACACTAGCTGTTaGGAATTGTTCATGGACATTGTTGTGGAGATAAAA +
Preference number: 6 (lower is better)
Translates to: FERSAAAGDTSC*ELFMDIVVEIK
Trigger: TTTTATCTCCACAACAATGTCCATGAACAATTCCAAACAGCTAGTGTCTCCTGCAGCTGCGCTTCTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS CAA 90 bp TATAAGTTGTTTGATCCACTTTCATGTTGCCTCTCCATCCACACCTaGTTTTTCTGTCATTTCTCGTTGAGTGTCTTATCGCTATGTAAG +
Preference number: 6 (lower is better)
Translates to: YKLFDPLSCCLSIHT*FFCHFSLSVLSLCK
Trigger: CTTACATAGCGATAAGACACTCAACGAGAAATGACAGAAAAACAAGGTGTGGATGGAGAGGCAACATGAAAGTGGATCAAACAACTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497923.5
CDS CAA 72 bp TTATCAGAAGCATATACAAATACTGCTATGGCTCCATaGATGAGATGGCCAAAGAAATCAGTGATTACCAGG +
Preference number: 6 (lower is better)
Translates to: LSEAYTNTAMAP*MRWPKKSVITR
Trigger: CCTGGTAATCACTGATTTCTTTGGCCATCTCATCAATGGAGCCATAGCAGTATTTGTATATGCTTCTGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5
CDS CAA 90 bp GACCAGAAAACACCATGCAGATACCAAAAATACTGCAAAGGACATTaGATTGGTCAAAGCGGATCCATTCTTTATCAGAAGCATATACAA +
Preference number: 6 (lower is better)
Translates to: DQKTPCRYQKYCKGH*IGQSGSILYQKHIQ
Trigger: TTGTATATGCTTCTGATAAAGAATGGATCCGCTTTGACCAATCAAATGTCCTTTGCAGTATTTTTGGTATCTGCATGGTGTTTTCTGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370756.3
ENST00000370757.8
ENST00000370758.5
ENST00000497923.5