Pregenerated sensors for PTF1A (Homo sapiens)
Ensembl gene IDs: ENSG00000168267Ensembl transcript IDs: ENST00000376504.4, ENST00000638469.1, ENST00000639873.1, ENST00000640579.1, ENST00000640697.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATaGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATTTGCTGTTGAG | + |
|
Preference number: 1 (lower is better) Translates to: QIFSRVWDFSGHKLK*WFVFYVVEGRFAVE Trigger: CTCAACAGCAAATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR CCA 90 bp | ATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTaGTTCGTTTTCTATGTTGTTGAAGGAAGATTTGCTGTTGAGTTT | + |
|
Preference number: 1 (lower is better) Translates to: IFSRVWDFSGHKLKW*FVFYVVEGRFAVEF Trigger: AAACTCAACAGCAAATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR CCA 90 bp | CATGTACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTaGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTAT | + |
|
Preference number: 1 (lower is better) Translates to: HVQYAQRHNQIFSRV*DFSGHKLKWWFVFY Trigger: ATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR-3UTR CCA 90 bp | GCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTTTCTGGGGTCCTCTaGGGTCCAGACTTTGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AESGTSQDTNSNGGSFSMFSGVL*GPDFGC Trigger: ACAGCCAAAGTCTGGACCCCAGAGGACCCCAGAAAA...CATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR-3UTR CCA 90 bp | TACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGTTTTCTGGGGTCCTCTaGGGTCCAGACTTTGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: YNMHRDIIRSSAESGTSQFSGVL*GPDFGC Trigger: ACAGCCAAAGTCTGGACCCCAGAGGACCCCAGAAAA...CTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTCTGGGGTCCAGACTTaGGCTGTTCGGATAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: DLQPSLGLLRTQTQMVVRSGVQT*AVRIIF Trigger: AAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA...ACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTGTTGAAGGAAGATTaGCTGTTGAGTTTTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DLQPSLGLLRTQTQMVVRLLKED*LLSFLG Trigger: CCCCAGAAAACTCAACAGCAAATCTTCCTTCAACAA...ACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR-3UTR CAA 90 bp | TATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACTTGTTGAAGGAAGATTaGCTGTTGAGTTTTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YAQRHNQIFSRVWDFSGHLLKED*LLSFLG Trigger: CCCCAGAAAACTCAACAGCAAATCTTCCTTCAACAA...GTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR CCA 72 bp | TATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTaGGACTTCTCAGGACACAAACTCAAATGGTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: YAQRHNQIFSRV*DFSGHKLKWWF Trigger: GAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR CCA 72 bp | CGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTaGTTCGTTTTCTATGTTGTTGAAGGAAGATTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RVWDFSGHKLKW*FVFYVVEGRFA Trigger: AGCAAATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR CCA 72 bp | AGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATaGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: SRVWDFSGHKLK*WFVFYVVEGRF Trigger: AAATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATCTGGGGTCCAGACTTaGGCTGTTCGGATAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: FSGHKLKWWFVFYVVEGRSGVQT*AVRIIF Trigger: AAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA...TCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| 3UTR-3UTR CAA 90 bp | GGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATTTGCTTCTGGGGTCCAGACTTaGGCTGTTCGGATAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: GHKLKWWFVFYVVEGRFASGVQT*AVRIIF Trigger: AAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA...AGCAAATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR GCA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTGCCGCCTGCCGCAGCTaGTGCAGCTCCGCCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AINKQDVFWPEFSQQHRVAACRS*CSSASE Trigger: CTCCGAGGCGGAGCTGCAGCAGCTGCGGCAGGCGGC...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR GCA 90 bp | TATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACCCTTCTGGGCCTGGCTaGCCGGGCTGTCCCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLAINKQDVFWPEFSQQHPSGPG*PGCPRP Trigger: TGGGCGGGGACAGCCCGGGCAGCCAGGCCCAGAAGG...GTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | TTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATTGGCGCTCGCGCTGCGCTaGGGAGGGCTGTGGCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FWPEFSQQHRVQENHRLLALALR*GGLWRT Trigger: AGTCCGCCACAGCCCTCCCCAGCGCAGCGCGAGCGC...CAATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | GATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTCATAATCAGGGTCGCTaGGGGAGGGGGACCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLQPSLGLLRTQTQMVVRHNQGR*GRGTLG Trigger: GCCGAGGGTCCCCCTCCCCCAGCGACCCTGATTATG...ACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638469.1 |
||
| CDS-3UTR GCA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCGCACGTTGGCCGCCTaGCGCAGCTGCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AINKQDVFWPEFSQQHRVRTLAA*RSCCSS Trigger: GGAGCTGCAGCAGCTGCGGCAGGCGGCCAACGTGCG...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATGCCGCTCGCGCACGTTaGCCGCCTGCCGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSGQSSPNNTEFRKIIGYAARAR*PPAAAA Trigger: AGCAGCTGCGGCAGGCGGCCAACGTGCGCGAGCGGC...ATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | AGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGGTCCGACTGTCTGCTTaGCAGTCAGCTCCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSAESGTSQDTNSNGGSVRLSA*QSAPPA Trigger: GGCTGGGGGAGCTGACTGCCAAGCAGACAGTCGGAC...CGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR GCA 90 bp | TTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATTGAGGCCCCCGGGGAAGTaGTCCAGCAACACCGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FWPEFSQQHRVQENHRLLRPPGK*SSNTAS Trigger: GGACGCGGTGTTGCTGGAGCACTTCCCCGGGGGCCT...CAATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR GCA 90 bp | TCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTGTCGGTCCGACTGTCTaGTTGGCAGTCAGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SAESGTSQDTNSNGGSFSVGPTV*LAVSSP Trigger: GGGGGAGCTGACTGCCAAGCAGACAGTCGGACCGAC...AGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR GCA 90 bp | TATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACGTCGGTCCGACTGTCTaGTTGGCAGTCAGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YAQRHNQIFSRVWDFSGHVGPTV*LAVSSP Trigger: GGGGGAGCTGACTGCCAAGCAGACAGTCGGACCGAC...GTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR GCA 90 bp | GTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGGGGGACCCTCGGCCTaGTCGTCCGCCAGCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VWDFSGHKLKWWFVFYVVGGPSA*SSASSS Trigger: TGAGCTGCTGGCGGACGAGCAGGCCGAGGGTCCCCC...AACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638469.1 |
||
| CDS-3UTR GCA 90 bp | TATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGTGGGCAGCGGGACTaGCGGGCTGCGCGTGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLAINKQDVFWPEFSQQHSGQRD*RAARVS Trigger: ACTAACACGCGCAGCCCGGCAGTCCCGCTGCCCACT...GTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATGGCAGCGTGGGGATGTaGGAGCGCAGCCCCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSGQSSPNNTEFRKIIGYGSVGM*ERSPSK Trigger: CTTCGAGGGGCTGCGCTCGCACATCCCCACGCTGCC...ATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTTCTCGTAGGGCAGCGTaGGGATGTGCGAGCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AINKQDVFWPEFSQQHRVSRRAA*GCASAA Trigger: GGCTGCGCTCGCACATCCCCACGCTGCCCTACGAGA...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCATAATCAGGGTCGCTaGGGGAGGGGGACCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AINKQDVFWPEFSQQHRVHNQGR*GRGTGC Trigger: GCACCCGGTCCCCCTCCCCCAGCGACCCTGATTATG...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATCCTCGAAGGCGTCGTTaGTGGACTGCATGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSGQSSPNNTEFRKIIGYPRRRR*WTACAA Trigger: GGCGGCGCATGCAGTCCATCAACGACGCCTTCGAGG...ATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR GCA 90 bp | ACGCTTAGAAATAAACCATATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCACCCGGGAGACAGTACTaGCGCCCCGGCGCACGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLRNKPYLAINKQDVFWPPGRQY*RPGARV Trigger: TACCCGTGCGCCGGGGCGGCAGTACTGTCTCCCGGG...TGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATATGGTTTATTTCTAAGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | AATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGGGGTCCCGTGAAGACTaGTCGGTGAAGAAGTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQIFSRVWDFSGHKLKWWGSRED*SVKKSS Trigger: GGACGACTTCTTCACCGACCAGTCTTCACGGGACCC...CCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638469.1 |
||
| CDS-3UTR CCA 90 bp | TACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGTCCGACTGTCTGCTTaGCAGTCAGCTCCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YNMHRDIIRSSAESGTSQVRLSA*QSAPPA Trigger: GGCTGGGGGAGCTGACTGCCAAGCAGACAGTCGGAC...CTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR TCA 90 bp | GCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAAGTGAAGACTGGTCGGTaGAGAAGTCGTCCTCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AQRHNQIFSRVWDFSGHKVKTGR*RSRPRR Trigger: TCGACGAGGACGACTTCTTCACCGACCAGTCTTCAC...TTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638469.1 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATAACTCCACCTCGGCCTaGTCGTCCGCCAGCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSGQSSPNNTEFRKIIGYNSTSA*SSASSS Trigger: TGAGCTGCTGGCGGACGAGCAGGCCGAGGTGGAGTT...ATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATAAGGGCAGGTCGGCCTaGACGAGCTCGCTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSGQSSPNNTEFRKIIGYKGRSA*TSSLRK Trigger: CTTCCTCAGCGAGCTCGTGCAGGCCGACCTGCCCTT...ATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTGCAGCGTGTCCACCTTaGAGAGGCGCTTCTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AINKQDVFWPEFSQQHRVAACPP*RGASRR Trigger: CCTACGAGAAGCGCCTCTCCAAGGTGGACACGCTGC...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | ACGCTTAGAAATAAACCATATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCAATGACCTTCTGGGCCTaGCTGCCCGGGCTGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TLRNKPYLAINKQDVFWPMTFWA*LPGLSP Trigger: CGGGGACAGCCCGGGCAGCCAGGCCCAGAAGGTCAT...TGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATATGGTTTATTTCTAAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATCAGATGATGACCTTCTaGGCCTGGCTGCCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSGQSSPNNTEFRKIIGYQMMTF*AWLPGL Trigger: CAGCCCGGGCAGCCAGGCCCAGAAGGTCATCATCTG...ATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTGACCGGGTGCCCCGATaGCAGATGATGACCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AINKQDVFWPEFSQQHRVDRVPR*QMMTFW Trigger: CCAGAAGGTCATCATCTGCCATCGGGGCACCCGGTC...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | CAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCTTTTCTGGGGTCCTCTaGGGTCCAGACTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QIFSRVWDFSGHKLKWWFFSGVL*GPDFGC Trigger: ACAGCCAAAGTCTGGACCCCAGAGGACCCCAGAAAA...GAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATCTCCAGGGGGTCCCGTaGAGACTGGTCGGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSGQSSPNNTEFRKIIGYLQGVP*RLVGEE Trigger: TTCTTCACCGACCAGTCTTCACGGGACCCCCTGGAG...ATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR TCA 90 bp | ATGTACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCTCCAGGGGGTCCCGTaGAGACTGGTCGGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MYNMHRDIIRSSAESGTSLQGVP*RLVGEE Trigger: TTCTTCACCGACCAGTCTTCACGGGACCCCCTGGAG...AGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638469.1 |
||
| CDS-3UTR TCA 90 bp | TATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACGTGAAGACTGGTCGGTaGAGAAGTCGTCCTCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YLAINKQDVFWPEFSQQHVKTGR*RSRPRR Trigger: TCGACGAGGACGACTTCTTCACCGACCAGTCTTCAC...GTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR GCA 90 bp | GGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATTTGCTGTCGGTCCGACTGTCTaGTTGGCAGTCAGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHKLKWWFVFYVVEGRFAVGPTV*LAVSSP Trigger: GGGGGAGCTGACTGCCAAGCAGACAGTCGGACCGAC...AGCAAATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | TATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACCAGTACTCGTGGAGCTaGTGGCTAAGGAACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YLAINKQDVFWPEFSQQHQYSWS*WLRNST Trigger: GGTGGAGTTCCTTAGCCACCAGCTCCACGAGTACTG...GTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTTTTTCATCAGTCCATaGGAGAGAGTGTCCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSAESGTSQDTNSNGGSFFFISP*ERVSCD Trigger: GTCGCAGGACACTCTCTCTCATGGACTGATGAAAAA...AAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGA 48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640579.1 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATTTTCTGGGGTCCTCTaGGGTCCAGACTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFWPEFSQQHRVQENHRLFSGVL*GPDFGC Trigger: ACAGCCAAAGTCTGGACCCCAGAGGACCCCAGAAAA...TAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | ATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTATCTTCAGCCGAGTCTaGGACTTCTCAGGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRSSAESGTSQDTNSNGGIFSRV*DFSGHK Trigger: TTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGAT...ACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | ACGCTTAGAAATAAACCATATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCAGGGTCCCGTGAAGACTaGTCGGTGAAGAAGTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLRNKPYLAINKQDVFWPGSRED*SVKKSS Trigger: GGACGACTTCTTCACCGACCAGTCTTCACGGGACCC...TGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATATGGTTTATTTCTAAGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGGTCCAGACTTTGGCTGTTCGGATAATATTTTGTTCCTTGAGTTGTTTTTTTCTGGGGTCCTCTaGGGTCCAGACTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWGPDFGCSDNILFLELFFSGVL*GPDFGC Trigger: ACAGCCAAAGTCTGGACCCCAGAGGACCCCAGAAAA...AAACAACTCAAGGAACAAAATATTATCCGAACAGCCAAAGTCTGGACCCCAGAG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | TCAAATGGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATTTGCTGTTGAGTTTTGTCCGACTGTCTGCTTaGCAGTCAGCTCCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SNGGSFSMLLKEDLLLSFVRLSA*QSAPPA Trigger: GGCTGGGGGAGCTGACTGCCAAGCAGACAGTCGGAC...AAAACTCAACAGCAAATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | ACGCTTAGAAATAAACCATATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCATACTCGTGGAGCTGGTaGCTAAGGAACTCCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TLRNKPYLAINKQDVFWPYSWSW*LRNSTS Trigger: CGAGGTGGAGTTCCTTAGCCACCAGCTCCACGAGTA...TGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATATGGTTTATTTCTAAGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | TGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGAATTTTCTGGGGTCCTCTaGGGTCCAGACTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WDFSGHKLKWWFVFYVVEFSGVL*GPDFGC Trigger: ACAGCCAAAGTCTGGACCCCAGAGGACCCCAGAAAA...TTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | TTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTATTGATCTTCAGCCGAGTCTaGGACTTCTCAGGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FWPEFSQQHRVQENHRLLIFSRV*DFSGHK Trigger: TTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGAT...CAATAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTAAAGCAGGACGTTTTCTaGCCAGAGTTCTCCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: VFWPEFSQQHRVQENHRLKQDVF*PEFSQQ Trigger: TTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTT...TAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATTTTTCTGGGGTCCTCTaGGGTCCAGACTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQDTNSNGGSFSMLLKEDFSGVL*GPDFGC Trigger: ACAGCCAAAGTCTGGACCCCAGAGGACCCCAGAAAA...ATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | ATGTACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTATCTTCAGCCGAGTCTaGGACTTCTCAGGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: MYNMHRDIIRSSAESGTSIFSRV*DFSGHK Trigger: TTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGAT...AGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR TCA 90 bp | TACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGTTTTTCATCAGTCCATaGGAGAGAGTGTCCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: YNMHRDIIRSSAESGTSQFFISP*ERVSDN Trigger: ATTGTCGGACACTCTCTCTCATGGACTGATGAAAAA...CTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | CACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACGGACACAAACTCAAATaGTGGTTCGTTTTCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HRDIIRSSAESGTSQDTNGHKLK*WFVFYV Trigger: AACATAGAAAACGAACCACCATTTGAGTTTGTGTCC...GTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | AATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGGGACACAAACTCAAATaGTGGTTCGTTTTCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NQIFSRVWDFSGHKLKWWGHKLK*WFVFYV Trigger: AACATAGAAAACGAACCACCATTTGAGTTTGTGTCC...CCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGTCCAGACTTTGGCTGTTCGGATAATATTTTGTTCCTTGAGTTGTTTTATCTTCAGCCGAGTCTaGGACTTCTCAGGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGVQTLAVRIIFCSLSCFIFSRV*DFSGHK Trigger: TTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGAT...AAAACAACTCAAGGAACAAAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTCACAAACTCAAATGGTaGTTCGTTTTCTATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSAESGTSQDTNSNGGSFHKLKW*FVFYVV Trigger: AACAACATAGAAAACGAACCACCATTTGAGTTTGTG...AAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | ATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTCACAAACTCAAATGGTaGTTCGTTTTCTATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IRSSAESGTSQDTNSNGGHKLKW*FVFYVV Trigger: AACAACATAGAAAACGAACCACCATTTGAGTTTGTG...ACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTGGACACAAACTCAAATaGTGGTTCGTTTTCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: AINKQDVFWPEFSQQHRVGHKLK*WFVFYV Trigger: AACATAGAAAACGAACCACCATTTGAGTTTGTGTCC...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCACAAACTCAAATGGTaGTTCGTTTTCTATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AINKQDVFWPEFSQQHRVHKLKW*FVFYVV Trigger: AACAACATAGAAAACGAACCACCATTTGAGTTTGTG...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CCA 90 bp | TACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGCACAAACTCAAATGGTaGTTCGTTTTCTATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YNMHRDIIRSSAESGTSQHKLKW*FVFYVV Trigger: AACAACATAGAAAACGAACCACCATTTGAGTTTGTG...CTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | GGGACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGAAGGGACACAAACTCAAATaGTGGTTCGTTTTCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTSQDTNSNGGSFSMLLKGHKLK*WFVFYV Trigger: AACATAGAAAACGAACCACCATTTGAGTTTGTGTCC...CTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGTCCAGACTTTGGCTGTTCGGATAATATTTTGTTCCTTGAGTTGTTTTGGACACAAACTCAAATaGTGGTTCGTTTTCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGVQTLAVRIIFCSLSCFGHKLK*WFVFYV Trigger: AACATAGAAAACGAACCACCATTTGAGTTTGTGTCC...AAAACAACTCAAGGAACAAAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS TCA 90 bp | CGCAGTGGGCAGCGGGACTGCCGGGCTGCGCGTGTTAGTTCTTGGTaGGTTTCTAAGGCCCGTCCGAGCCCCTCCCTCCCGGGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSGQRDCRAARVSSW*VSKARPSPSLPGPW Trigger: CCAGGGCCCCGGGAGGGAGGGGCTCGGACGGGCCTTAGAAACTCACCAAGAACTAACACGCGCAGCCCGGCAGTCCCGCTGCCCACTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS GCA 90 bp | TCGTCGAAGTACGAAGAAGGAAAGGCGTCTAGGCCCCCGGGGAAGTaGTCCAGCAACACCGCGTCCATGCTCGCCGCCGCAGTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKYEEGKASRPPGK*SSNTASMLAAAVGS Trigger: GCTGCCCACTGCGGCGGCGAGCATGGACGCGGTGTTGCTGGAGCACTTCCCCGGGGGCCTAGACGCCTTTCCTTCTTCGTACTTCGACGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS GCA 90 bp | TCCATGAGAGAGAGTGTCCTGCGACAATCCGTCGGTCCGACTGTCTaGTTGGCAGTCAGCTCCCCCAGCCCCTCCGGAGCCTTCGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SMRESVLRQSVGPTV*LAVSSPSPSGAFEC Trigger: GCACTCGAAGGCTCCGGAGGGGCTGGGGGAGCTGACTGCCAAGCAGACAGTCGGACCGACGGATTGTCGCAGGACACTCTCTCTCATGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000640579.1 |
||
| CDS TCA 90 bp | CTGCTCGTCCGCCAGCAGCTCATCGCCGTCCTCCAGGGGGTCCCGTaGAGACTGGTCGGTGAAGAAGTCGTCCTCGTCGAAGTACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLVRQQLIAVLQGVP*RLVGEEVVLVEVRR Trigger: TCTTCGTACTTCGACGAGGACGACTTCTTCACCGACCAGTCTTCACGGGACCCCCTGGAGGACGGCGATGAGCTGCTGGCGGACGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000376504.4 ENST00000638469.1 |
||
| CDS CCA 90 bp | TCCGCCAGCAGCTCATCGCCGTCCTCCAGGGGGTCCCGTGAAGACTaGTCGGTGAAGAAGTCGTCCTCGTCGAAGTACGAAGAAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SASSSSPSSRGSRED*SVKKSSSSKYEEGK Trigger: CTTTCCTTCTTCGTACTTCGACGAGGACGACTTCTTCACCGACCAGTCTTCACGGGACCCCCTGGAGGACGGCGATGAGCTGCTGGCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000376504.4 ENST00000638469.1 |
||
| CDS TCA 90 bp | GCAGCTCATCGCCGTCCTCCAGGGGGTCCCGTGAAGACTGGTCGGTaGAGAAGTCGTCCTCGTCGAAGTACGAAGAAGGAAAGGCGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AAHRRPPGGPVKTGR*RSRPRRSTKKERRL Trigger: TAGACGCCTTTCCTTCTTCGTACTTCGACGAGGACGACTTCTTCACCGACCAGTCTTCACGGGACCCCCTGGAGGACGGCGATGAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000376504.4 ENST00000638469.1 |
||
| CDS-3UTR CAA 90 bp | ATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAACTCAAATGGTGGTGGTCCGACTGTCTGCTaGGCAGTCAGCTCCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IRSSAESGTSQDTNSNGGGPTVC*AVSSPS Trigger: GCTGGGGGAGCTGACTGCCAAGCAGACAGTCGGACC...ACCACCATTTGAGTTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CAA 90 bp | GCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGACACAAAGGTCCGACTGTCTGCTaGGCAGTCAGCTCCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQRHNQIFSRVWDFSGHKGPTVC*AVSSPS Trigger: GCTGGGGGAGCTGACTGCCAAGCAGACAGTCGGACC...TTTGTGTCCTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTCAGGAAAATCATAGGCTACCCTCGAAGGCGTCGTaGATGGACTGCATGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VFWPEFSQQHRVQENHRLPSKAS*MDCMRR Trigger: GCGGCGCATGCAGTCCATCAACGACGCCTTCGAGGG...TAGCCTATGATTTTCCTGAACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CAA 90 bp | GTACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGGTCCGACTGTCTGCTaGGCAGTCAGCTCCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VQYAQRHNQIFSRVWDFSGPTVC*AVSSPS Trigger: GCTGGGGGAGCTGACTGCCAAGCAGACAGTCGGACC...TGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CAA 90 bp | GCAATAAATAAGCAGGACGTTTTCTGGCCAGAGTTCTCCCAACAACACAGAGTTTCTGGGGTCCAGACTTaGGCTGTTCGGATAATATTT | + |
|
Preference number: 5 (lower is better) Translates to: AINKQDVFWPEFSQQHRVSGVQT*AVRIIF Trigger: AAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA...AACTCTGTGTTGTTGGGAGAACTCTGGCCAGAAAACGTCCTGCTTATTTATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CAA 90 bp | TACAATATGCACAGAGACATAATCAGATCTTCAGCCGAGTCTGGGACTTCTCAGTTGTTGAAGGAAGATTaGCTGTTGAGTTTTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YNMHRDIIRSSAESGTSQLLKED*LLSFLG Trigger: CCCCAGAAAACTCAACAGCAAATCTTCCTTCAACAA...CTGAGAAGTCCCAGACTCGGCTGAAGATCTGATTATGTCTCTGTGCATATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CAA 90 bp | GACTTCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGAAGGATCTGGGGTCCAGACTTaGGCTGTTCGGATAATATTT | + |
|
Preference number: 5 (lower is better) Translates to: DFSGHKLKWWFVFYVVEGSGVQT*AVRIIF Trigger: AAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA...TCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGTCCAGACTTTGGCTGTTCGGATAATATTTTGTTCCTTGAGTTGTTTTTCTGGGGTCCAGACTTaGGCTGTTCGGATAATATTT | + |
|
Preference number: 5 (lower is better) Translates to: SGVQTLAVRIIFCSLSCFSGVQT*AVRIIF Trigger: AAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA...AAAACAACTCAAGGAACAAAATATTATCCGAACAGCCAAAGTCTGGACCCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGGTCCAGACTTTGGCTGTTCGGATAATATTTTGTTCCTTGAGTTGTTTTTGTTGAAGGAAGATTaGCTGTTGAGTTTTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LWGPDFGCSDNILFLELFLLKED*LLSFLG Trigger: CCCCAGAAAACTCAACAGCAAATCTTCCTTCAACAA...AAACAACTCAAGGAACAAAATATTATCCGAACAGCCAAAGTCTGGACCCCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CAA 90 bp | ACGCTTAGAAATAAACCATATCTGGCAATAAATAAGCAGGACGTTTTCTGGCCATTGTTGAAGGAAGATTaGCTGTTGAGTTTTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLRNKPYLAINKQDVFWPLLKED*LLSFLG Trigger: CCCCAGAAAACTCAACAGCAAATCTTCCTTCAACAA...TGGCCAGAAAACGTCCTGCTTATTTATTGCCAGATATGGTTTATTTCTAAGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGACACAAACTCAAATGGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATTTGTTGAAGGAAGATTaGCTGTTGAGTTTTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQDTNSNGGSFSMLLKEDLLKED*LLSFLG Trigger: CCCCAGAAAACTCAACAGCAAATCTTCCTTCAACAA...ATCTTCCTTCAACAACATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS-3UTR CAA 90 bp | AAATGGTGGTTCGTTTTCTATGTTGTTGAAGGAAGATTTGCTGTTGAGTTTTCTTTGTTGAAGGAAGATTaGCTGTTGAGTTTTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KWWFVFYVVEGRFAVEFSLLKED*LLSFLG Trigger: CCCCAGAAAACTCAACAGCAAATCTTCCTTCAACAA...AGAAAACTCAACAGCAAATCTTCCTTCAACAACATAGAAAACGAACCACCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000638469.1 ENST00000639873.1 ENST00000640579.1 ENST00000640697.1 |
||
| CDS GCA 72 bp | GCTCAGGCCGCGCAGCCGCGCCCCGGGAGACAGTACTaGCGCCCCGGCGCACGGGTAGGCCAGGCACGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AQAAQPRPGRQY*RPGARVGQARG Trigger: CCCTCGTGCCTGGCCTACCCGTGCGCCGGGGCGGCAGTACTGTCTCCCGGGGCGCGGCTGCGCGGCCTGAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS TCA 72 bp | CAGCGGGACTGCCGGGCTGCGCGTGTTAGTTCTTGGTaGGTTTCTAAGGCCCGTCCGAGCCCCTCCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QRDCRAARVSSW*VSKARPSPSLP Trigger: CGGGAGGGAGGGGCTCGGACGGGCCTTAGAAACTCACCAAGAACTAACACGCGCAGCCCGGCAGTCCCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS GCA 72 bp | TACGAAGAAGGAAAGGCGTCTAGGCCCCCGGGGAAGTaGTCCAGCAACACCGCGTCCATGCTCGCCGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: YEEGKASRPPGK*SSNTASMLAAA Trigger: TGCGGCGGCGAGCATGGACGCGGTGTTGCTGGAGCACTTCCCCGGGGGCCTAGACGCCTTTCCTTCTTCGTA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376504.4 |
||
| CDS TCA 72 bp | CGCCAGCAGCTCATCGCCGTCCTCCAGGGGGTCCCGTaGAGACTGGTCGGTGAAGAAGTCGTCCTCGTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RQQLIAVLQGVP*RLVGEEVVLVE Trigger: TTCGACGAGGACGACTTCTTCACCGACCAGTCTTCACGGGACCCCCTGGAGGACGGCGATGAGCTGCTGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000376504.4 ENST00000638469.1 |
||
| CDS TCA 72 bp | CGCCGTCCTCCAGGGGGTCCCGTGAAGACTGGTCGGTaGAGAAGTCGTCCTCGTCGAAGTACGAAGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RRPPGGPVKTGR*RSRPRRSTKKE Trigger: TTCCTTCTTCGTACTTCGACGAGGACGACTTCTTCACCGACCAGTCTTCACGGGACCCCCTGGAGGACGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000376504.4 ENST00000638469.1 |
||
| CDS CCA 72 bp | AGCTCATCGCCGTCCTCCAGGGGGTCCCGTGAAGACTaGTCGGTGAAGAAGTCGTCCTCGTCGAAGTACGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSSPSSRGSRED*SVKKSSSSKYE Trigger: TTCGTACTTCGACGAGGACGACTTCTTCACCGACCAGTCTTCACGGGACCCCCTGGAGGACGGCGATGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000376504.4 ENST00000638469.1 |
||