Pregenerated sensors for PTEN (Homo sapiens)
Ensembl gene IDs: ENSG00000171862Ensembl transcript IDs: ENST00000371953.8, ENST00000487939.1, ENST00000618586.1, ENST00000644628.1, ENST00000645317.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCACTGCAGTAAACAGACTTGGCAAACTGAAACACTAGAACCATaGCTACAAGCCTCACTTCATTCCACACAAATAAAATCTCTAACC | + |
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Preference number: 1 (lower is better) Translates to: FHCSKQTWQTETLEP*LQASLHSTQIKSLT Trigger: GGTTAGAGATTTTATTTGTGTGGAATGAAGTGAGGCTTGTAGTCATGGTTCTAGTGTTTCAGTTTGCCAAGTCTGTTTACTGCAGTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR GCA 90 bp | ATCAAATTCACACACACACAGACACACACACACACACTTACAAACTaGACATTAGGACATGAGGGCAATTTAATGGAAAAAGAAAATAGA | + |
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Preference number: 1 (lower is better) Translates to: IKFTHTQTHTHTLTN*TLGHEGNLMEKENR Trigger: TCTATTTTCTTTTTCCATTAAATTGCCCTCATGTCCTAATGTGCAGTTTGTAAGTGTGTGTGTGTGTGTCTGTGTGTGTGTGAATTTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR CCA 90 bp | GTGGCATTAGAAAGTAATCAAATCACTGTCCGTTTTCTGATGCAATaGAACATCCTACAAATTCATGACAGATATACTAAGCTAAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: VALESNQITVRFLMQ*NILQIHDRYTKLKS Trigger: GCTTTTTAGCTTAGTATATCTGTCATGAATTTGTAGGATGTTCCATTGCATCAGAAAACGGACAGTGATTTGATTACTTTCTAATGCCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGCTCGGGGGAGCACTATaGAGAAATGATTCAACACTG | + |
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Preference number: 2 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRLGGAL*RNDSTL Trigger: CAGTGTTGAATCATTTCTTCATAGTGCTCCCCCGAG...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGAAAGGGTGGAACGGCTaGCAGCTATTGAATAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMKGWNG*QLLNKC Trigger: GCACTTATTCAATAGCTGTCAGCCGTTCCACCCTTT...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGGTGATGGCATTTACTaGACCAAGCCAGCTCATATT | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMGDGIY*TKPAHI Trigger: AATATGAGCTGGCTTGGTTCAGTAAATGCCATCACC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGCCGCTTAAAATCGTATaGAGTCTGGGCATATCAAAT | + |
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Preference number: 2 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRPLKIV*SLGISN Trigger: ATTTGATATGCCCAGACTGCATACGATTTTAAGCGG...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTCTCAATGGAAATGGTaGTGGCATTTACTGAACCAA | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMSQWKW*WHLLNQ Trigger: TTGGTTCAGTAAATGCCATCACCATTTCCATTGAGA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGAGACATGTAAGCTGCTaGACATCCAAAAAGTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMRHVSC*TSKKSK Trigger: CTTAGACTTTTTGGATGTGCAGCAGCTTACATGTCT...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTTTTGTGTGCAGCATTaGAAGTTTACTGCAACTCTA | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMFCVQH*KFTATL Trigger: TAGAGTTGCAGTAAACTTTCAATGCTGCACACAAAA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTATGGGGATGGTAACTaGAATAAAGTAAGGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMYGDGN*NKVRRV Trigger: TACTCTCCTTACTTTATTTCAGTTACCATCCCCATA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGAGTTACGTTTTAATATaGGGTGCCCGAAATTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMSYVLI*GARNCN Trigger: GTTACAATTTCGGGCACCGCATATTAAAACGTAACT...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTCATTATTTATGACCTaGCCCTCCATGTTACATATT | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMSLFMT*PSMLHI Trigger: AATATGTAACATGGAGGGCCAGGTCATAAATAATGA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGTCCTTACAACAGTTTaGACTGAATATTCTTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMVLTTV*TEYSCF Trigger: GAAACAAGAATATTCAGTCCAAACTGTTGTAAGGAC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGGAGCTACAAAGGACTaGGGATGGTACAGGGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMGATKD*GWYRAQ Trigger: TTGGGCCCTGTACCATCCCAAGTCCTTTGTAGCTCC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR GCA 72 bp | ACACACACACAGACACACACACACACACTTACAAACTaGACATTAGGACATGAGGGCAATTTAATGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: THTQTHTHTLTN*TLGHEGNLMEK Trigger: TTTTTCCATTAAATTGCCCTCATGTCCTAATGTGCAGTTTGTAAGTGTGTGTGTGTGTGTCTGTGTGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTTAAAGCTGAAACATTaGATGCTGCCGGTAAACTCC | + |
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Preference number: 3 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMLKLKH*MLPVNS Trigger: GGAGTTTACCGGCAGCATCAAATGTTTCAGCTTTAA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGTTTTTGTGTGCAGCATaGAAAGTTTACTGCAACTCT | + |
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Preference number: 3 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRFLCAA*KVYCNS Trigger: AGAGTTGCAGTAAACTTTCAATGCTGCACACAAAAA...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCCTTACTATGCTTTGTaGAAAGGATATGCTTTAGTC | + |
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Preference number: 3 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMPYYAL*KGYALV Trigger: GACTAAAGCATATCCTTTCAACAAAGCATAGTAAGG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR TCA 72 bp | CTGGTTTTCAGGTACTGTCCTTACAACAGTTTGGACTaGATATTCTTGTTTCCATTCACAAACATTTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: LVFRYCPYNSLD*IFLFPFTNISF Trigger: GAAAGAAATGTTTGTGAATGGAAACAAGAATATTCAGTCCAAACTGTTGTAAGGACAGTACCTGAAAACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR GCA 72 bp | GTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATaGTGCTCTAGTAGGTCCTATTCAATCTGTATTTGT | + |
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Preference number: 3 (lower is better) Translates to: VLPNLFAIKLYK*CSSRSYSICIC Trigger: ACAAATACAGATTGAATAGGACCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR TCA 72 bp | ATCAATTTTTATATGGCACAAGTCATGATGAGTAAATaGAGCTTTCCATATGCTGATGGCAGAGTACAGAAT | + |
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Preference number: 3 (lower is better) Translates to: INFYMAQVMMSK*SFPYADGRVQN Trigger: ATTCTGTACTCTGCCATCAGCATATGGAAAGCTTCATTTACTCATCATGACTTGTGCCATATAAAAATTGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR GCA 72 bp | CTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTaGTCTAGTAGGTCCTATTCAATCTGTATTTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: LPNLFAIKLYKC*SSRSYSICICK Trigger: TTTACAAATACAGATTGAATAGGACCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR CCA 72 bp | GTGCAAAAGCCCATTATAATGTCATTATTTATGACCTaGCCCTCCATGTTACATATTGGAACAATAAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: VQKPIIMSLFMT*PSMLHIGTIKL Trigger: TAACTTTATTGTTCCAATATGTAACATGGAGGGCCAGGTCATAAATAATGACATTATAATGGGCTTTTGCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| 3UTR CCA 72 bp | GAAAGTAATCAAATCACTGTCCGTTTTCTGATGCAATaGAACATCCTACAAATTCATGACAGATATACTAAG | + |
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Preference number: 3 (lower is better) Translates to: ESNQITVRFLMQ*NILQIHDRYTK Trigger: CTTAGTATATCTGTCATGAATTTGTAGGATGTTCCATTGCATCAGAAAACGGACAGTGATTTGATTACTTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGCTGCTCACAGGCGCTaGGAGGGGCTCCGGGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMAAHRR*EGLRAA Trigger: CGCGGCCCGGAGCCCCTCTCAGCGCCTGTGAGCAGC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGCTCAGACCCCCTCCCTaGAGCTGCAGCCGCCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRLRPPP*SCSRRG Trigger: GCCGCGGCGGCTGCAGCTCCAGGGAGGGGGTCTGAG...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGCGGCGGCTGCTGGATaGTTGCAGCGACTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMAAAAG*LQRLGL Trigger: CAGGCCCAGTCGCTGCAACCATCCAGCAGCCGCCGC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGTGCTGCGGCGGCTGCTaGATGGTTGCAGCGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRCCGGC*MVAATG Trigger: CCCAGTCGCTGCAACCATCCAGCAGCCGCCGCAGCA...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR GCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGGCTGCTGCGGCGGCTaGTGGATGGTTGCAGCGACT | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMGCCGG*WMVAAT Trigger: AGTCGCTGCAACCATCCAGCAGCCGCCGCAGCAGCC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR GCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGTGGCGGGGCTTCTTCTaGAGGATGGAAATGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRWRGFF*RMEMAL Trigger: CAGAGCCATTTCCATCCTGCAGAAGAAGCCCCGCCA...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTGGCAGACCACAAACTaGGGATTGCAAGTTCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMWQTTN*GLQVPP Trigger: TGGCGGAACTTGCAATCCTCAGTTTGTGGTCTGCCA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGGCTTCTTCTGCAGGATaGAAATGGCTCTGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRASSAG*KWLWTW Trigger: CCAAGTCCAGAGCCATTTCCATCCTGCAGAAGAAGC...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGAAAGGGTGGAACGGCTaGCAGCTATTGAATAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRKGWNG*QLLNKC Trigger: GCACTTATTCAATAGCTGTCAGCCGTTCCACCCTTT...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGGAACTCAAAGTACATaGACTTGTCTTCCCGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMGTQST*TCLPVV Trigger: CACGACGGGAAGACAAGTTCATGTACTTTGAGTTCC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCTCGGGGGAGCACTATaGAGAAATGATTCAACACTG | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMLGGAL*RNDSTL Trigger: CAGTGTTGAATCATTTCTTCATAGTGCTCCCCCGAG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGGGTGATGGCATTTACTaGACCAAGCCAGCTCATATT | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRGDGIY*TKPAHI Trigger: AATATGAGCTGGCTTGGTTCAGTAAATGCCATCACC...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTCACTGTCCGTTTTCTaGTGCAATGGAACATCCTAC | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMSLSVF*CNGTSY Trigger: GTAGGATGTTCCATTGCATCAGAAAACGGACAGTGA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGTCTCAATGGAAATGGTaGTGGCATTTACTGAACCAA | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRSQWKW*WHLLNQ Trigger: TTGGTTCAGTAAATGCCATCACCATTTCCATTGAGA...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCAATATGAATTTGTCTaGCTGGCTACCCACATTCTG | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMQYEFV*LATHIL Trigger: CAGAATGTGGGTAGCCAGTCAGACAAATTCATATTG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGAGCTACCAACCAATATaGATTTGTCTGACTGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMSYQPI*ICLTGY Trigger: GTAGCCAGTCAGACAAATTCATATTGGTTGGTAGCT...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGAAACACTAGAACCATaGCTACAAGCCTCACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMETLEP*LQASLH Trigger: ATGAAGTGAGGCTTGTAGTCATGGTTCTAGTGTTTC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGCTGCACATTAGGACATaGGGGCAATTTAATGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRLHIRT*GQFNGK Trigger: TTTTCCATTAAATTGCCCTCATGTCCTAATGTGCAG...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR GCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGAGACATGTAAGCTGCTaGACATCCAAAAAGTCTAAG | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRRHVSC*TSKKSK Trigger: CTTAGACTTTTTGGATGTGCAGCAGCTTACATGTCT...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR GCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGAAGCCTTTGGAAGCCTaGATATTAAACACTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMKPLEA*ILNTGE Trigger: CTCACCAGTGTTTAATATGCAGGCTTCCAAAGGCTT...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGGTCATGATGAGTAAATaGAGCTTTCCATATGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRVMMSK*SFPYAD Trigger: ATCAGCATATGGAAAGCTTCATTTACTCATCATGAC...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR GCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCCGCTTAAAATCGTATaGAGTCTGGGCATATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMPLKIV*SLGISN Trigger: ATTTGATATGCCCAGACTGCATACGATTTTAAGCGG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR GCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTTCAGACATGTAAGCTaGTGCACATCCAAAAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMFRHVS*CTSKKS Trigger: AGACTTTTTGGATGTGCAGCAGCTTACATGTCTGAA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCATTATCCTGTTTCCTaGTTTTCAGGTACTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMHYPVS*FSGTVL Trigger: AAGGACAGTACCTGAAAACCAGGAAACAGGATAATG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCACAGCAAAGAATGGTaGTGCTATTTATTCAACTAC | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMHSKEW*CYLFNY Trigger: GTAGTTGAATAAATAGCATCACCATTCTTTGCTGTG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGACCCTTTTAAAAGTATaGCAAACATGTTCAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRTLLKV*QTCSRG Trigger: TCCTCTTGAACATGTTTGCCATACTTTTAAAAGGGT...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGGTCCTTACAACAGTTTaGACTGAATATTCTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRVLTTV*TEYSCF Trigger: GAAACAAGAATATTCAGTCCAAACTGTTGTAAGGAC...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGTGCAGTAAACAGACTTaGCAAACTGAAACACTAGAA | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMCSKQT*QTETLE Trigger: TTCTAGTGTTTCAGTTTGCCAAGTCTGTTTACTGCA...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR GCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGAAACTCTATAAATGCTaGTCTAGTAGGTCCTATTCA | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMKLYKC*SSRSYS Trigger: TGAATAGGACCTACTAGAGCAGCATTTATAGAGTTT...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR GCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGATCAAACTCTATAAATaGTGCTCTAGTAGGTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMIKLYK*CSSRSY Trigger: ATAGGACCTACTAGAGCAGCATTTATAGAGTTTGAT...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGAAACTGACAAGGTATaGAAAACGTGTCAACATTAT | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMETDKV*KTCQHY Trigger: ATAATGTTGACACGTTTTCCATACCTTGTCAGTTTC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGAGAAGGAAGATCTTTTaGAAGATGGAAAAACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMRRKIF*KMEKQQ Trigger: TTGCTGTTTTTCCATCTTCCAAAAGATCTTCCTTCT...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CCA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCGTTTTCTGATGCAATaGAACATCCTACAAATTCAT | + |
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Preference number: 4 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMRFLMQ*NILQIH Trigger: ATGAATTTGTAGGATGTTCCATTGCATCAGAAAACG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS TCA 90 bp | GGGCTTCTTCTGCAGGATGGAAATGGCTCTGGACTTGGCGGTAGCTaGTGCCCCTCGCTCTGCCGCCGCTTGGCTCTGGACCGCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GLLLQDGNGSGLGGS*CPSLCRRLALDRSR Trigger: CCGGCTGCGGTCCAGAGCCAAGCGGCGGCAGAGCGAGGGGCATCAGCTACCGCCAAGTCCAGAGCCATTTCCATCCTGCAGAAGAAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371953.8 ENST00000644628.1 ENST00000645317.1 |
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| CDS-3UTR CAA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGGCCGCCGCCGCCGTGTaGGAGGCAGTAGAAGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMAAAAV*EAVEGE Trigger: CTCCCCTTCTACTGCCTCCAACACGGCGGCGGCGGC...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CAA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGTCAAAGTACATGAACTaGTCTTCCCGTCGTGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRSKYMN*SSRRVG Trigger: ACCCACACGACGGGAAGACAAGTTCATGTACTTTGA...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CAA 90 bp | GAAGTTCTGCCTAATCTATTTGCCATCAAACTCTATAAATGCTGCTCTAGTAGGTTAAAGCTGAAACATTaGATGCTGCCGGTAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: EVLPNLFAIKLYKCCSSRLKLKH*MLPVNS Trigger: GGAGTTTACCGGCAGCATCAAATGTTTCAGCTTTAA...CCTACTAGAGCAGCATTTATAGAGTTTGATGGCAAATAGATTAGGCAGAACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS-3UTR CAA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCCAACCAATATGAATTaGTCTGACTGGCTACCCACA | + |
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Preference number: 5 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMPTNMN*SDWLPT Trigger: TGTGGGTAGCCAGTCAGACAAATTCATATTGGTTGG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS TCA 90 bp | ATCCATTCTATGTTTATGACAAGAGCACTGAACATTAAATGCTACTaGAGTGCAAATTTCAAGCACTATCCTACATCACCCCATAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: IHSMFMTRALNIKCY*SANFKHYPTSPHRE Trigger: CTCCCTATGGGGTGATGTAGGATAGTGCTTGAAATTTGCACTTCAGTAGCATTTAATGTTCAGTGCTCTTGTCATAAACATAGAATGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618586.1 |
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| CDS-3UTR CAA 90 bp | ACTGGCTACCCACATTCTGATATACATATTAGAAGGAAGATCTTTTGGAAGATGCCAAAGCAAACTATTTaGTCCTTTCCTGTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: TGYPHSDIHIRRKIFWKMPKQTI*SFPVFT Trigger: TGTGAAGACAGGAAAGGACAAAATAGTTTGCTTTGG...CATCTTCCAAAAGATCTTCCTTCTAATATGTATATCAGAATGTGGGTAGCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371953.8 |
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| CDS CAA 72 bp | CGGGGCTTCTTCTGCAGGATGGAAATGGCTCTGGACTaGGCGGTAGCTGATGCCCCTCGCTCTGCCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: RGFFCRMEMALD*AVADAPRSAAA Trigger: AGCGGCGGCAGAGCGAGGGGCATCAGCTACCGCCAAGTCCAGAGCCATTTCCATCCTGCAGAAGAAGCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000371953.8 ENST00000644628.1 ENST00000645317.1 |
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| CDS TCA 72 bp | GTCACACAAATTTCATGTGTAGAGACCAACATACGCTaGAATCAAAGAAAATGCCAGTCATGTCACAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VTQISCVETNIR*NQRKCQSCHSS Trigger: TGAGCTGTGACATGACTGGCATTTTCTTTGATTTCAGCGTATGTTGGTCTCTACACATGAAATTTGTGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487939.1 |
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| CDS TCA 72 bp | GTTGTACCTGAAACTGCAAAGATTAATGCTTTTCGATaGCCACTAACTTTTGAAGCCCGAAGGCCTAACTTT | + |
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Preference number: 6 (lower is better) Translates to: VVPETAKINAFR*PLTFEARRPNF Trigger: AAAGTTAGGCCTTCGGGCTTCAAAAGTTAGTGGTCATCGAAAAGCATTAATCTTTGCAGTTTCAGGTACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618586.1 |
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| CDS TCA 72 bp | ACAGAAAGGAAACACAAAATATATGACCTAGCAACCTaGCCAGGGTTAAATGTTATAGTCACCCAAACTACG | + |
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Preference number: 6 (lower is better) Translates to: TERKHKIYDLAT*PGLNVIVTQTT Trigger: CGTAGTTTGGGTGACTATAACATTTAACCCTGGTCAGGTTGCTAGGTCATATATTTTGTGTTTCCTTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618586.1 |
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| CDS TCA 72 bp | GCAACTCAGGAAACTAAAACAATCACTGCAAGATTCTaGTGCAATATGCGTACGTGCAACACTAATTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: ATQETKTITARF*CNMRTCNTNFH Trigger: ATGAAAATTAGTGTTGCACGTACGCATATTGCATCAGAATCTTGCAGTGATTGTTTTAGTTTCCTGAGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618586.1 |
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| CDS TCA 72 bp | ATGTTTATGACAAGAGCACTGAACATTAAATGCTACTaGAGTGCAAATTTCAAGCACTATCCTACATCACCC | + |
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Preference number: 6 (lower is better) Translates to: MFMTRALNIKCY*SANFKHYPTSP Trigger: GGGTGATGTAGGATAGTGCTTGAAATTTGCACTTCAGTAGCATTTAATGTTCAGTGCTCTTGTCATAAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618586.1 |
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