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Pregenerated sensors for PTCSC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000259104

Ensembl transcript IDs: ENST00000556013.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TGCCTTGGGAGGCCAAGGTGGGAAGATTGTTCAAGCCCTGGAGTTTaGGAACAGCTTGGGCAACGTGTCGAGACTCCATCTTTTGCATTA +
Preference number: 5 (lower is better)
Translates to: CLGRPRWEDCSSPGV*EQLGQRVETPSFAL
Trigger: TAATGCAAAAGATGGAGTCTCGACACGTTGCCCAAGCTGTTCTCAAACTCCAGGGCTTGAACAATCTTCCCACCTTGGCCTCCCAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CCA 90 bp GCCAAGGTGGGAAGATTGTTCAAGCCCTGGAGTTTGAGAACAGCTTaGGCAACGTGTCGAGACTCCATCTTTTGCATTAATCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: AKVGRLFKPWSLRTA*ATCRDSIFCINLPG
Trigger: CCCAGGGAGATTAATGCAAAAGATGGAGTCTCGACACGTTGCCCAAGCTGTTCTCAAACTCCAGGGCTTGAACAATCTTCCCACCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS GCA 90 bp TCCTATTCGGCCATTTTGCCACCATGGTCTAGTGTTCCCTCTCAGTaGAGTCTTAAGCCTAATTCCTCTTCTGCTTGGCCTTTGACCTGG +
Preference number: 5 (lower is better)
Translates to: SYSAILPPWSSVPSQ*SLKPNSSSAWPLTW
Trigger: CCAGGTCAAAGGCCAAGCAGAAGAGGAATTAGGCTTAAGACTGCACTGAGAGGGAACACTAGACCATGGTGGCAAAATGGCCGAATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CCA 90 bp GTCGAGACTCCATCTTTTGCATTAATCTCCCTGGGAGCTGTAGACTaGAGCTGCTCCTATTCGGCCATTTTGCCACCATGGTCTAGTGTT +
Preference number: 5 (lower is better)
Translates to: VETPSFALISLGAVD*SCSYSAILPPWSSV
Trigger: AACACTAGACCATGGTGGCAAAATGGCCGAATAGGAGCAGCTCCAGTCTACAGCTCCCAGGGAGATTAATGCAAAAGATGGAGTCTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CCA 90 bp TGGGTCTACCTTTCCCAGCCCACTGACTCAAATGTTAATCTCCTTTaGCAACACCCTCACAGACACACCCAGGAACAATACTTTGCATCC +
Preference number: 5 (lower is better)
Translates to: WVYLSQPTDSNVNLL*QHPHRHTQEQYFAS
Trigger: GGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGGGTGTTGCCAAAGGAGATTAACATTTGAGTCAGTGGGCTGGGAAAGGTAGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CCA 72 bp GACTGGAGCTGCTCCTATTCGGCCATTTTGCCACCATaGTCTAGTGTTCCCTCTCAGTGCAGTCTTAAGCCT +
Preference number: 6 (lower is better)
Translates to: DWSCSYSAILPP*SSVPSQCSLKP
Trigger: AGGCTTAAGACTGCACTGAGAGGGAACACTAGACCATGGTGGCAAAATGGCCGAATAGGAGCAGCTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CAA 90 bp GTGCCTTGGGAGGCCAAGGTGGGAAGATTGTTCAAGCCCTGGAGTTaGAGAACAGCTTGGGCAACGTGTCGAGACTCCATCTTTTGCATT +
Preference number: 6 (lower is better)
Translates to: VPWEAKVGRLFKPWS*RTAWATCRDSIFCI
Trigger: AATGCAAAAGATGGAGTCTCGACACGTTGCCCAAGCTGTTCTCAAACTCCAGGGCTTGAACAATCTTCCCACCTTGGCCTCCCAAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CCA 72 bp CCATCTTTTGCATTAATCTCCCTGGGAGCTGTAGACTaGAGCTGCTCCTATTCGGCCATTTTGCCACCATGG +
Preference number: 6 (lower is better)
Translates to: PSFALISLGAVD*SCSYSAILPPW
Trigger: CCATGGTGGCAAAATGGCCGAATAGGAGCAGCTCCAGTCTACAGCTCCCAGGGAGATTAATGCAAAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CCA 72 bp CTTTCCCAGCCCACTGACTCAAATGTTAATCTCCTTTaGCAACACCCTCACAGACACACCCAGGAACAATAC +
Preference number: 6 (lower is better)
Translates to: LSQPTDSNVNLL*QHPHRHTQEQY
Trigger: GTATTGTTCCTGGGTGTGTCTGTGAGGGTGTTGCCAAAGGAGATTAACATTTGAGTCAGTGGGCTGGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CAA 90 bp AAGCCTAATTCCTCTTCTGCTTGGCCTTTGACCTGGTCTCTCCAGTaGACTTTTCCACAACAGTCTTCACTCACAGGCAGAGTAGAAATG +
Preference number: 6 (lower is better)
Translates to: KPNSSSAWPLTWSLQ*TFPQQSSLTGRVEM
Trigger: CATTTCTACTCTGCCTGTGAGTGAAGACTGTTGTGGAAAAGTCAACTGGAGAGACCAGGTCAAAGGCCAAGCAGAAGAGGAATTAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS CCA 72 bp GGAAGATTGTTCAAGCCCTGGAGTTTGAGAACAGCTTaGGCAACGTGTCGAGACTCCATCTTTTGCATTAAT +
Preference number: 6 (lower is better)
Translates to: GRLFKPWSLRTA*ATCRDSIFCIN
Trigger: ATTAATGCAAAAGATGGAGTCTCGACACGTTGCCCAAGCTGTTCTCAAACTCCAGGGCTTGAACAATCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556013.2
CDS GCA 72 bp GCAACACCCTCACAGACACACCCAGGAACAATACTTTaGATCCTTCAATCCAATCAAGTTGACACTCAGTAT +
Preference number: 6 (lower is better)
Translates to: ATPSQTHPGTIL*ILQSNQVDTQY
Trigger: ATACTGAGTGTCAACTTGATTGGATTGAAGGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGGGTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556013.2