Pregenerated sensors for PTCSC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000236130Ensembl transcript IDs: ENST00000430058.2, ENST00000648027.1, ENST00000648505.1, ENST00000648625.1, ENST00000649253.1, ENST00000649461.1, ENST00000649526.1, ENST00000650104.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTTGGCAGAGGCCTGAAAAGTCCGAAAACTCCGAGTTCGGGCGCTaGGGTCTCCCGAGCCGGTTCCTGAACTCTCCGGGCCTCAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: PWQRPEKSENSEFGR*GLPSRFLNSPGLSR Trigger: TCGACTGAGGCCCGGAGAGTTCAGGAACCGGCTCGGGAGACCTCAGCGCCCGAACTCGGAGTTTTCGGACTTTTCAGGCCTCTGCCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000649461.1 ENST00000649526.1 ENST00000650104.1 |
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| CDS CCA 90 bp | CCTGCAGGGGATTGCCCAGGGGCACAGATGTCCCAGGCTCCTGGGTaGGTTGGAACCATCAAGCTCCCTGAAGAAAGGCTCCCAAGACAG | + |
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Preference number: 5 (lower is better) Translates to: PAGDCPGAQMSQAPG*VGTIKLPEERLPRQ Trigger: CTGTCTTGGGAGCCTTTCTTCAGGGAGCTTGATGGTTCCAACCCACCCAGGAGCCTGGGACATCTGTGCCCCTGGGCAATCCCCTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649526.1 |
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| CDS TCA 90 bp | GTGCAGCTTTCCACCATCTGCGAGTCCAAGCCCTTGGCAGAGGCCTaGAAAGTCCGAAAACTCCGAGTTCGGGCGCTGAGGTCTCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: VQLSTICESKPLAEA*KVRKLRVRALRSPE Trigger: CTCGGGAGACCTCAGCGCCCGAACTCGGAGTTTTCGGACTTTTCAGGCCTCTGCCAAGGGCTTGGACTCGCAGATGGTGGAAAGCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649461.1 ENST00000649526.1 |
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| CDS CCA 90 bp | ACTGCAGGGGATTGCCCAGGGGCACAGATGTCCCAGGCTCCTGGGTaGGTTGGAACCATCAAGCTCCCTGAAGAAAGGCTCCCAAGACAG | + |
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Preference number: 5 (lower is better) Translates to: TAGDCPGAQMSQAPG*VGTIKLPEERLPRQ Trigger: CTGTCTTGGGAGCCTTTCTTCAGGGAGCTTGATGGTTCCAACCCACCCAGGAGCCTGGGACATCTGTGCCCCTGGGCAATCCCCTGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS GCA 90 bp | CTCCTGTCACTTGTGCCTAGTTCCTGGGGCCATGGTCCTTGGAGCTaGTGCATCAGATTCTCCCAACCACTGTCCTCCTTGCCCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LLSLVPSSWGHGPWS*CIRFSQPLSSLPSA Trigger: AGCTGAGGGCAAGGAGGACAGTGGTTGGGAGAATCTGATGCAGCAGCTCCAAGGACCATGGCCCCAGGAACTAGGCACAAGTGACAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648625.1 ENST00000649253.1 |
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| CDS TCA 90 bp | TTCACAGTGGTCTGCCTGGGCAGGATTTCTTCTCCCTTCAGACCATaGGACCCAGGACTGCTCCACGTCCCCCATCTCTCAGAAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: FTVVCLGRISSPFRP*DPGLLHVPHLSEAA Trigger: AGCAGCTTCTGAGAGATGGGGGACGTGGAGCAGTCCTGGGTCTCATGGTCTGAAGGGAGAAGAAATCCTGCCCAGGCAGACCACTGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS GCA 90 bp | GCCTGGGCAGGATTTCTTCTCCCTTCAGACCATGAGACCCAGGACTaGTCCACGTCCCCCATCTCTCAGAAGCTGCTCAGGAGTGCAATT | + |
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Preference number: 5 (lower is better) Translates to: AWAGFLLPSDHETQD*STSPISQKLLRSAI Trigger: AATTGCACTCCTGAGCAGCTTCTGAGAGATGGGGGACGTGGAGCAGTCCTGGGTCTCATGGTCTGAAGGGAGAAGAAATCCTGCCCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS CCA 90 bp | AAGTGTCTCCTGTCACTTGTGCCTAGTTCCTGGGGCCATGGTCCTTaGAGCTGCTGCATCAGATTCTCCCAACCACTGTCCTCCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: KCLLSLVPSSWGHGP*SCCIRFSQPLSSLP Trigger: GGGCAAGGAGGACAGTGGTTGGGAGAATCTGATGCAGCAGCTCCAAGGACCATGGCCCCAGGAACTAGGCACAAGTGACAGGAGACACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648625.1 ENST00000649253.1 |
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| CDS CCA 90 bp | GTCTGTTCAGGTGGAAACAAGCCTGGACATTCACAGTGGTCTGCCTaGGCAGGATTTCTTCTCCCTTCAGACCATGAGACCCAGGACTGC | + |
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Preference number: 5 (lower is better) Translates to: VCSGGNKPGHSQWSA*AGFLLPSDHETQDC Trigger: GCAGTCCTGGGTCTCATGGTCTGAAGGGAGAAGAAATCCTGCCCAGGCAGACCACTGTGAATGTCCAGGCTTGTTTCCACCTGAACAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS TCA 90 bp | ACAGATGTCCCAGGCTCCTGGGTGGGTTGGAACCATCAAGCTCCCTaGAGAAAGGCTCCCAAGACAGGGAACATAATTATTCCCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TDVPGSWVGWNHQAP*RKAPKTGNIIIPPG Trigger: TCCTGGGGGAATAATTATGTTCCCTGTCTTGGGAGCCTTTCTTCAGGGAGCTTGATGGTTCCAACCCACCCAGGAGCCTGGGACATCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 ENST00000649526.1 |
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| CDS CCA 90 bp | GGGTTTAGACATAGCAAGTGTCTCCTGTCACTTGTGCCTAGTTCCTaGGGCCATGGTCCTTGGAGCTGCTGCATCAGATTCTCCCAACCA | + |
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Preference number: 5 (lower is better) Translates to: GFRHSKCLLSLVPSS*GHGPWSCCIRFSQP Trigger: TGGTTGGGAGAATCTGATGCAGCAGCTCCAAGGACCATGGCCCCAGGAACTAGGCACAAGTGACAGGAGACACTTGCTATGTCTAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648625.1 ENST00000649253.1 |
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| CDS TCA 90 bp | AGCTGTGGTCTTTGGAGTCCAAATCTCTGGCCTTTCCTCATTCTGTaGAGACCTGCACCCCTTCTTTCAGGCAGGTATAAGACACCGTGT | + |
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Preference number: 5 (lower is better) Translates to: SCGLWSPNLWPFLIL*RPAPLLSGRYKTPC Trigger: ACACGGTGTCTTATACCTGCCTGAAAGAAGGGGTGCAGGTCTTCACAGAATGAGGAAAGGCCAGAGATTTGGACTCCAAAGACCACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS CCA 90 bp | GGGTTTAGACATAGCAAGTGTCTCCTGTCACTTGTGCCTAGTTCCTaGGGCCATGGTCCTTGGAGCTGCTATATCCAGTTCGAATACATA | + |
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Preference number: 5 (lower is better) Translates to: GFRHSKCLLSLVPSS*GHGPWSCYIQFEYI Trigger: TATGTATTCGAACTGGATATAGCAGCTCCAAGGACCATGGCCCCAGGAACTAGGCACAAGTGACAGGAGACACTTGCTATGTCTAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648027.1 |
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| CDS GCA 90 bp | TTGGGGACTGTGGATATAGCTTGCCACAGTATCTTATCAGTTAATTaGATTCTTGGATGTGCTGGGAGTCAGCTTGCACAAGTTAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LGTVDIACHSILSVN*ILGCAGSQLAQVKS Trigger: GGACTTAACTTGTGCAAGCTGACTCCCAGCACATCCAAGAATGCAATTAACTGATAAGATACTGTGGCAAGCTATATCCACAGTCCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS GCA 90 bp | ACAGTTCCAGATGCAGGGGCTTTAAGACTATTACAAGGTTATAGATaGAGGGCTTTGGGCGTTATCAAACAGATGAATTCTTGGGGACTG | + |
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Preference number: 5 (lower is better) Translates to: TVPDAGALRLLQGYR*RALGVIKQMNSWGL Trigger: CAGTCCCCAAGAATTCATCTGTTTGATAACGCCCAAAGCCCTGCATCTATAACCTTGTAATAGTCTTAAAGCCCCTGCATCTGGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS CCA 90 bp | AGTTCAGCTATCTTTGGCTTAAGGAACAAGGCCATTTTCATTGTGTaGAGAACAGTGGTGTTTGAAATAGCAGGAACAGGCAGAAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SSAIFGLRNKAIFIV*RTVVFEIAGTGRKE Trigger: CTCCTTTCTGCCTGTTCCTGCTATTTCAAACACCACTGTTCTCCACACAATGAAAATGGCCTTGTTCCTTAAGCCAAAGATAGCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS TCA 90 bp | GTTGCTCCTTTGGTAGAAATGGCTACTGGAGGAAATTTGATTCATTaGAGAACTTGGCTTGGGAATTTGCAGACTGGTAGCACTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: VAPLVEMATGGNLIH*RTWLGNLQTGSTHQ Trigger: TTGATGAGTGCTACCAGTCTGCAAATTCCCAAGCCAAGTTCTTCAATGAATCAAATTTCCTCCAGTAGCCATTTCTACCAAAGGAGCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS GCA 90 bp | ATCCAGTTCGAATACATAGCCATGTCAGTGGGAAGGAAAAACAGTTaGTCCTTTGGTAGAAATGGCTACTGGAGGAAATTTGATTCATTG | + |
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Preference number: 5 (lower is better) Translates to: IQFEYIAMSVGRKNS*SFGRNGYWRKFDSL Trigger: CAATGAATCAAATTTCCTCCAGTAGCCATTTCTACCAAAGGAGCAACTGTTTTTCCTTCCCACTGACATGGCTATGTATTCGAACTGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS TCA 72 bp | TCGTGGGCCAGGATGATGGCCTGTGCTAGCCGTCCTTaGAAAGGCGAGGCCGGGCTGAGGGTGCACTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SWARMMACASRP*KGEAGLRVHWV Trigger: AACCCAGTGCACCCTCAGCCCGGCCTCGCCTTTTCAAGGACGGCTAGCACAGGCCATCATCCTGGCCCACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000648027.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS TCA 72 bp | AGGCCTGAAAAGTCCGAAAACTCCGAGTTCGGGCGCTaGGGTCTCCCGAGCCGGTTCCTGAACTCTCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: RPEKSENSEFGR*GLPSRFLNSPG Trigger: GCCCGGAGAGTTCAGGAACCGGCTCGGGAGACCTCAGCGCCCGAACTCGGAGTTTTCGGACTTTTCAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000649461.1 ENST00000649526.1 ENST00000650104.1 |
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| CDS TCA 72 bp | GGGTGGCAGAGAGAGATCCTTCATCGTGGGCCAGGATaGTGGCCTGTGCTAGCCGTCCTTGAAAAGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: GWQREILHRGPG*WPVLAVLEKAR Trigger: CCTCGCCTTTTCAAGGACGGCTAGCACAGGCCATCATCCTGGCCCACGATGAAGGATCTCTCTCTGCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000648027.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS TCA 72 bp | GAGAGATCCTGCGAGTCCAAGCCCTTGGCAGAGGCCTaGAAAGTCCGAAAACTCCGAGTTCGGGCGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ERSCESKPLAEA*KVRKLRVRALR Trigger: CCTCAGCGCCCGAACTCGGAGTTTTCGGACTTTTCAGGCCTCTGCCAAGGGCTTGGACTCGCAGGATCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650104.1 |
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| CDS CCA 72 bp | GATTGCCCAGGGGCACAGATGTCCCAGGCTCCTGGGTaGGTTGGAACCATCAAGCTCCCTGAAGAAAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: DCPGAQMSQAPG*VGTIKLPEERL Trigger: GAGCCTTTCTTCAGGGAGCTTGATGGTTCCAACCCACCCAGGAGCCTGGGACATCTGTGCCCCTGGGCAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 ENST00000649526.1 |
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| CDS TCA 72 bp | CCTGTGCTAGCCGTCCTTGAAAAGGCGAGGCCGGGCTaGGGGTGCACTGGGTTTAGACATAGCAAGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PVLAVLEKARPG*GCTGFRHSKCL Trigger: GAGACACTTGCTATGTCTAAACCCAGTGCACCCTCAGCCCGGCCTCGCCTTTTCAAGGACGGCTAGCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000648027.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS TCA 72 bp | GTCTGCCTGGGCAGGATTTCTTCTCCCTTCAGACCATaGGACCCAGGACTGCTCCACGTCCCCCATCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VCLGRISSPFRP*DPGLLHVPHLS Trigger: TGAGAGATGGGGGACGTGGAGCAGTCCTGGGTCTCATGGTCTGAAGGGAGAAGAAATCCTGCCCAGGCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS GCA 72 bp | GGATTTCTTCTCCCTTCAGACCATGAGACCCAGGACTaGTCCACGTCCCCCATCTCTCAGAAGCTGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GFLLPSDHETQD*STSPISQKLLR Trigger: CCTGAGCAGCTTCTGAGAGATGGGGGACGTGGAGCAGTCCTGGGTCTCATGGTCTGAAGGGAGAAGAAATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS CCA 72 bp | CTGTCACTTGTGCCTAGTTCCTGGGGCCATGGTCCTTaGAGCTGCTGCATCAGATTCTCCCAACCACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSLVPSSWGHGP*SCCIRFSQPLS Trigger: GGACAGTGGTTGGGAGAATCTGATGCAGCAGCTCCAAGGACCATGGCCCCAGGAACTAGGCACAAGTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648625.1 ENST00000649253.1 |
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| CDS CAA 72 bp | AGCTGCTGCATCAGATTCTCCCAACCACTGTCCTCCTaGCCCTCAGCTTCCGTGACAACAGGCACTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SCCIRFSQPLSS*PSASVTTGTPG Trigger: ACCAGGAGTGCCTGTTGTCACGGAAGCTGAGGGCAAGGAGGACAGTGGTTGGGAGAATCTGATGCAGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648625.1 ENST00000649253.1 |
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| CDS CAA 90 bp | GGTCCTTGGAGCTGCTGCATCAGATTCTCCCAACCACTGTCCTCCTaGCCCTCAGCTTCCGTGACAACAGGCACTCCTGGTTTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GPWSCCIRFSQPLSS*PSASVTTGTPGFLP Trigger: AGGAAGAAAACCAGGAGTGCCTGTTGTCACGGAAGCTGAGGGCAAGGAGGACAGTGGTTGGGAGAATCTGATGCAGCAGCTCCAAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648625.1 ENST00000649253.1 |
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| CDS TCA 72 bp | TCTCCCAACCACTGTCCTCCTTGCCCTCAGCTTCCGTaGCAACAGGCACTCCTGGTTTTCTTCCTACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SPNHCPPCPQLP*QQALLVFFLPL Trigger: GAGAGGTAGGAAGAAAACCAGGAGTGCCTGTTGTCACGGAAGCTGAGGGCAAGGAGGACAGTGGTTGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648625.1 ENST00000649253.1 |
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| CDS CCA 72 bp | CATAGCAAGTGTCTCCTGTCACTTGTGCCTAGTTCCTaGGGCCATGGTCCTTGGAGCTGCTGCATCAGATTC | + |
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Preference number: 6 (lower is better) Translates to: HSKCLLSLVPSS*GHGPWSCCIRF Trigger: GAATCTGATGCAGCAGCTCCAAGGACCATGGCCCCAGGAACTAGGCACAAGTGACAGGAGACACTTGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648625.1 ENST00000649253.1 |
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| CDS CCA 72 bp | GGTGGAAACAAGCCTGGACATTCACAGTGGTCTGCCTaGGCAGGATTTCTTCTCCCTTCAGACCATGAGACC | + |
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Preference number: 6 (lower is better) Translates to: GGNKPGHSQWSA*AGFLLPSDHET Trigger: GGTCTCATGGTCTGAAGGGAGAAGAAATCCTGCCCAGGCAGACCACTGTGAATGTCCAGGCTTGTTTCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS CAA 72 bp | GGATGTGCTGGGAGTCAGCTTGCACAAGTTAAGTCCTaGAGGAAGGGGCTGCCAGTGAAAGAGCCAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: GCAGSQLAQVKS*RKGLPVKEPRW Trigger: CCATCTTGGCTCTTTCACTGGCAGCCCCTTCCTCAAGGACTTAACTTGTGCAAGCTGACTCCCAGCACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS GCA 72 bp | CCCAGGACTGCTCCACGTCCCCCATCTCTCAGAAGCTaGTCAGGAGTGCAATTTCTAGACCATAATGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: PRTAPRPPSLRS*SGVQFLDHNVQ Trigger: CTGAACATTATGGTCTAGAAATTGCACTCCTGAGCAGCTTCTGAGAGATGGGGGACGTGGAGCAGTCCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS CCA 72 bp | CATAGCAAGTGTCTCCTGTCACTTGTGCCTAGTTCCTaGGGCCATGGTCCTTGGAGCTGCTATATCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: HSKCLLSLVPSS*GHGPWSCYIQF Trigger: GAACTGGATATAGCAGCTCCAAGGACCATGGCCCCAGGAACTAGGCACAAGTGACAGGAGACACTTGCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648027.1 |
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| CDS CCA 72 bp | GTCTGTTCAGGTGGAAACAAGCCTGGACATTCACAGTaGTCTGCCTGGGCAGGATTTCTTCTCCCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: VCSGGNKPGHSQ*SAWAGFLLPSD Trigger: GTCTGAAGGGAGAAGAAATCCTGCCCAGGCAGACCACTGTGAATGTCCAGGCTTGTTTCCACCTGAACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS TCA 72 bp | CCAGGCTCCTGGGTGGGTTGGAACCATCAAGCTCCCTaGAGAAAGGCTCCCAAGACAGGGAACATAATTATT | + |
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Preference number: 6 (lower is better) Translates to: PGSWVGWNHQAP*RKAPKTGNIII Trigger: AATAATTATGTTCCCTGTCTTGGGAGCCTTTCTTCAGGGAGCTTGATGGTTCCAACCCACCCAGGAGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 ENST00000649526.1 |
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| CDS CAA 90 bp | GAACTTGGCTTGGGAATTTGCAGACTGGTAGCACTCATCAAGGCCTaGGAGATCTTCGGATTCTACCCCCTCATCTTGGAATCAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: ELGLGICRLVALIKA*EIFGFYPLILESGN Trigger: GTTTCCTGATTCCAAGATGAGGGGGTAGAATCCGAAGATCTCCAAGGCCTTGATGAGTGCTACCAGTCTGCAAATTCCCAAGCCAAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS CAA 72 bp | TTGGGAATTTGCAGACTGGTAGCACTCATCAAGGCCTaGGAGATCTTCGGATTCTACCCCCTCATCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LGICRLVALIKA*EIFGFYPLILE Trigger: TTCCAAGATGAGGGGGTAGAATCCGAAGATCTCCAAGGCCTTGATGAGTGCTACCAGTCTGCAAATTCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS CAA 72 bp | CTGGTAAGTGACAGCTTAGAATCCAAGCTGTGGTCTTaGGAGTCCAAATCTCTGGCCTTTCCTCATTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LVSDSLESKLWS*ESKSLAFPHSV Trigger: CACAGAATGAGGAAAGGCCAGAGATTTGGACTCCAAAGACCACAGCTTGGATTCTAAGCTGTCACTTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS CCA 72 bp | TTTTGGCTGGTAAGTGACAGCTTAGAATCCAAGCTGTaGTCTTTGGAGTCCAAATCTCTGGCCTTTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FWLVSDSLESKL*SLESKSLAFPH Trigger: ATGAGGAAAGGCCAGAGATTTGGACTCCAAAGACCACAGCTTGGATTCTAAGCTGTCACTTACCAGCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS CAA 72 bp | ATGCAGGGCTTTGGGCGTTATCAAACAGATGAATTCTaGGGGACTGTGGATATAGCTTGCCACAGTATCTTA | + |
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Preference number: 6 (lower is better) Translates to: MQGFGRYQTDEF*GTVDIACHSIL Trigger: TAAGATACTGTGGCAAGCTATATCCACAGTCCCCAAGAATTCATCTGTTTGATAACGCCCAAAGCCCTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS TCA 72 bp | TTGGTAGAAATGGCTACTGGAGGAAATTTGATTCATTaGAGAACTTGGCTTGGGAATTTGCAGACTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LVEMATGGNLIH*RTWLGNLQTGS Trigger: GCTACCAGTCTGCAAATTCCCAAGCCAAGTTCTTCAATGAATCAAATTTCCTCCAGTAGCCATTTCTACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000430058.2 ENST00000648027.1 ENST00000648505.1 ENST00000648625.1 ENST00000649253.1 ENST00000649461.1 |
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| CDS TCA 72 bp | AAAGTTCCAGTTGCTCTACATCTTTACCTTAGAGCTTaGACTGATGGTCGAGTAGATAATCTAATGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: KVPVALHLYLRA*TDGRVDNLMWA Trigger: GGCCCACATTAGATTATCTACTCGACCATCAGTTCAAGCTCTAAGGTAAAGATGTAGAGCAACTGGAACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS TCA 72 bp | AATGCTGATAGTCTCCAAAGTGGTTGCAGCAGTGTATaGAAGTTCCAGTTGCTCTACATCTTTACCTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: NADSLQSGCSSV*KFQLLYIFTLE Trigger: CTCTAAGGTAAAGATGTAGAGCAACTGGAACTTTCATACACTGCTGCAACCACTTTGGAGACTATCAGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS GCA 72 bp | GATGCAGGGGCTTTAAGACTATTACAAGGTTATAGATaGAGGGCTTTGGGCGTTATCAAACAGATGAATTCT | + |
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Preference number: 6 (lower is better) Translates to: DAGALRLLQGYR*RALGVIKQMNS Trigger: AGAATTCATCTGTTTGATAACGCCCAAAGCCCTGCATCTATAACCTTGTAATAGTCTTAAAGCCCCTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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| CDS GCA 72 bp | CAAACAGATGAATTCTTGGGGACTGTGGATATAGCTTaGCACAGTATCTTATCAGTTAATTGCATTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QTDEFLGTVDIA*HSILSVNCILG Trigger: TCCAAGAATGCAATTAACTGATAAGATACTGTGGCAAGCTATATCCACAGTCCCCAAGAATTCATCTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649461.1 |
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