RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTCD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000049883

Ensembl transcript IDs: ENST00000308077.9, ENST00000380639.10, ENST00000486995.5, ENST00000493283.5, ENST00000503315.5, ENST00000503868.5, ENST00000536805.5, ENST00000543322.5

Found 503 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATTTGCAGGCACTGGGGGTATCCACGACCCCCAGTGGTCACCACTaGACCCACGTGCAACTAGAGGGCGAGGGTGCGCTCCAGGCCAGT +
Preference number: 1 (lower is better)
Translates to: DLQALGVSTTPSGHH*THVQLEGEGALQAS
Trigger: ACTGGCCTGGAGCGCACCCTCGCCCTCTAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGCCTGCAAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR CCA 90 bp GCAGTCCTTCGATTTGCAGGCACTGGGGGTATCCACGACCCCCAGTaGTCACCACTGCACCCACGTGCAACTAGAGGGCGAGGGTGCGCT +
Preference number: 1 (lower is better)
Translates to: AVLRFAGTGGIHDPQ*SPLHPRATRGRGCA
Trigger: AGCGCACCCTCGCCCTCTAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGCCTGCAAATCGAAGGACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR TCA 90 bp GCATTTCCAGGCAGGCCCGCAGTTCACAGACCAGTTCACAGACCGTaGTGCCTTGCAGGCCATCTCAGAGGCCCCTGGTTCTCTTTCTTC +
Preference number: 1 (lower is better)
Translates to: AFPGRPAVHRPVHRP*CLAGHLRGPWFSFF
Trigger: GAAGAAAGAGAACCAGGGGCCTCTGAGATGGCCTGCAAGGCATCACGGTCTGTGAACTGGTCTGTGAACTGCGGGCCTGCCTGGAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp CCACGGATACATTACTGCAAGATACAGGGGCCCTGGTCCAGTACATaGATGCACTGGCCAACCCAGGACCCCCGCACAGGCAAGTCATTC +
Preference number: 1 (lower is better)
Translates to: PRIHYCKIQGPWSST*MHWPTQDPRTGKSF
Trigger: GAATGACTTGCCTGTGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTATCTTGCAGTAATGTATCCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp TGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTaGCATGACCCTCTAAAAGGCCTGCTGGGCCCAACACTGCATCAG +
Preference number: 1 (lower is better)
Translates to: CVGQMVETTDLSSGC*HDPLKGLLGPTLHQ
Trigger: CTGATGCAGTGTTGGGCCCAGCAGGCCTTTTAGAGGGTCATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp CTATCCCAGAGCAGCCAGCTCTGCAGTGTTTCAGCTGCAGGGCAGTaGTTAGCAGGTAAGCATGTGGTTCCCTTTCCCTCTGGGCCTTCT +
Preference number: 1 (lower is better)
Translates to: LSQSSQLCSVSAAGQ*LAGKHVVPFPSGPS
Trigger: AGAAGGCCCAGAGGGAAAGGGAACCACATGCTTACCTGCTAATCACTGCCCTGCAGCTGAAACACTGCAGAGCTGGCTGCTCTGGGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp GGGCAAGGCAGGCCAAGCGGGGAGGTGAGCAGTTCAGCAGCGCTTTaGTCCTCTTTCATTAGCAACTTGAAAGTCACCTGGAACCGTTGT +
Preference number: 1 (lower is better)
Translates to: GQGRPSGEVSSSAAL*SSFISNLKVTWNRC
Trigger: ACAACGGTTCCAGGTGACTTTCAAGTTGCTAATGAAAGAGGATCAAAGCGCTGCTGAACTGCTCACCTCCCCGCTTGGCCTGCCTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 90 bp GGATACATTACTGCAAGATACAGGGGCCCTGGTCCAGTACATGAATaGACTGGCCAACCCAGGACCCCCGCACAGGCAAGTCATTCTACT +
Preference number: 1 (lower is better)
Translates to: GYITARYRGPGPVHE*TGQPRTPAQASHST
Trigger: AGTAGAATGACTTGCCTGTGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTATCTTGCAGTAATGTATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp GGAGGTGGCAATGAAGAGTCTGCAGCAATCTTGGCAGACAGCTCCTaGGGTCTGAGCAACCCTCTGGGCTTTCTGAAACAAAAGGAGCAA +
Preference number: 1 (lower is better)
Translates to: GGGNEESAAILADSS*GLSNPLGFLKQKEQ
Trigger: TTGCTCCTTTTGTTTCAGAAAGCCCAGAGGGTTGCTCAGACCTCAGGAGCTGTCTGCCAAGATTGCTGCAGACTCTTCATTGCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp CAATGTGCGACTCTCATATGCGGATCCTGTCCTCAGGTGGGATTGTaGTCTCAGACCTGGATTCAGCAAACACCTGAAGCTGTGACTCTC +
Preference number: 1 (lower is better)
Translates to: QCATLICGSCPQVGL*SQTWIQQTPEAVTL
Trigger: GAGAGTCACAGCTTCAGGTGTTTGCTGAATCCAGGTCTGAGATCACAATCCCACCTGAGGACAGGATCCGCATATGAGAGTCGCACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR CCA 90 bp GAGGTTTCTGGGAACAGGTGGAATGGACCAGTTTTTCCAGTCGGCTaGGCAGCAGGGATTGGGAAGCTTGTTGCTATTTACTGCTCACAA +
Preference number: 1 (lower is better)
Translates to: EVSGNRWNGPVFPVG*AAGIGKLVAIYCSQ
Trigger: TTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGCCGACTGGAAAAACTGGTCCATTCCACCTGTTCCCAGAAACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp CATTATGCATATAGCTACCTCTGTACTGAGGTTTCTGGGAACAGGTaGAATGGACCAGTTTTTCCAGTCGGCTGGGCAGCAGGGATTGGG +
Preference number: 1 (lower is better)
Translates to: HYAYSYLCTEVSGNR*NGPVFPVGWAAGIG
Trigger: CCCAATCCCTGCTGCCCAGCCGACTGGAAAAACTGGTCCATTCCACCTGTTCCCAGAAACCTCAGTACAGAGGTAGCTATATGCATAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp TCCTGCAGAAGTGAGCTTCATGCTACTGATTATTTACTTGCAAAGTaGGCGTTGTGCCTGGGTGATACCCTGCCTCCCTATGCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: SCRSELHATDYLLAK*ALCLGDTLPPYAVQ
Trigger: CTGCACTGCATAGGGAGGCAGGGTATCACCCAGGCACAACGCCCACTTTGCAAGTAAATAATCAGTAGCATGAAGCTCACTTCTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp CCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATaGCACCTGAGTCTAGTGAAGAAAACAGACAGTGACAGGCATATG +
Preference number: 1 (lower is better)
Translates to: PTMLGTQQTEQKGQT*HLSLVKKTDSDRHM
Trigger: CATATGCCTGTCACTGTCTGTTTTCTTCACTAGACTCAGGTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp AGCTTCATGCTACTGATTATTTACTTGCAAAGTGGGCGTTGTGCCTaGGTGATACCCTGCCTCCCTATGCAGTGCAGTAGAACACAGCCT +
Preference number: 1 (lower is better)
Translates to: SFMLLIIYLQSGRCA*VIPCLPMQCSRTQP
Trigger: AGGCTGTGTTCTACTGCACTGCATAGGGAGGCAGGGTATCACCCAGGCACAACGCCCACTTTGCAAGTAAATAATCAGTAGCATGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp GAAAGACAGGGTGATGCTGTGCTCTTCTGGGTGAGCATCTTGGCCTaGTTCAGTCAGGAAAAAGGAATCAGGGAAGACAAGGGATTTACA +
Preference number: 1 (lower is better)
Translates to: ERQGDAVLFWVSILA*FSQEKGIREDKGFT
Trigger: TGTAAATCCCTTGTCTTCCCTGATTCCTTTTTCCTGACTGAATCAGGCCAAGATGCTCACCCAGAAGAGCACAGCATCACCCTGTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp AGACAGGGGGACCTATTCCGCCTATCTGTCTCAGAACCTTTAAAATaGGGTCAGGAAATTTGCTACTTGGGCTTAGCAATGTGCTGGTTG +
Preference number: 1 (lower is better)
Translates to: RQGDLFRLSVSEPLK*GQEICYLGLAMCWL
Trigger: CAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCATTTTAAAGGTTCTGAGACAGATAGGCGGAATAGGTCCCCCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp CAGGTGGAATGGACCAGTTTTTCCAGTCGGCTGGGCAGCAGGGATTaGGAAGCTTGTTGCTATTTACTGCTCACAAAATTTGGTTATTTC +
Preference number: 1 (lower is better)
Translates to: QVEWTSFSSRLGSRD*EACCYLLLTKFGYF
Trigger: GAAATAACCAAATTTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGCCGACTGGAAAAACTGGTCCATTCCACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 90 bp TTCCGCCTATCTGTCTCAGAACCTTTAAAATGGGGTCAGGAAATTTaGTACTTGGGCTTAGCAATGTGCTGGTTGTCTTTGTCCCACACT +
Preference number: 1 (lower is better)
Translates to: FRLSVSEPLKWGQEI*YLGLAMCWLSLSHT
Trigger: AGTGTGGGACAAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCATTTTAAAGGTTCTGAGACAGATAGGCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp CCCACTGAATTTGATATTTTGACTCTAAGGGTGTATCACAGGCTGTaGAATGAAAGGGGTATAGGAGCCCAGAGCCACTCAATTGGTTCA +
Preference number: 1 (lower is better)
Translates to: PTEFDILTLRVYHRL*NERGIGAQSHSIGS
Trigger: TGAACCAATTGAGTGGCTCTGGGCTCCTATACCCCTTTCATTCCACAGCCTGTGATACACCCTTAGAGTCAAAATATCAAATTCAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp CTTATCCCAACTGCAATCATGTGGTCATTTGCCCAGTTATCTTTTTaGTGTCTGTTGCTCTTGCAGAATGCAAGCTCCATGGGAACAGAG +
Preference number: 1 (lower is better)
Translates to: LIPTAIMWSFAQLSF*CLLLLQNASSMGTE
Trigger: CTCTGTTCCCATGGAGCTTGCATTCTGCAAGAGCAACAGACATCAAAAAGATAACTGGGCAAATGACCACATGATTGCAGTTGGGATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp TTCTTGGGCCCTGACTCATATGTATGGAATCAGATATTCTGGGGGTaGGGCCCATCAATCTGTATTTTAACAAGCTCTCCAAGTGATTCT +
Preference number: 1 (lower is better)
Translates to: FLGPDSYVWNQIFWG*GPSICILTSSPSDS
Trigger: AGAATCACTTGGAGAGCTTGTTAAAATACAGATTGATGGGCCCCACCCCCAGAATATCTGATTCCATACATATGAGTCAGGGCCCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp GGCAGTGATAAATACACCGGGAATCCAACATTTCCCTCACTTAAATaGAGAACGCTCCAAGATTTAGTCATTCCTGATGATGGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: GSDKYTGNPTFPSLK*RTLQDLVIPDDGRK
Trigger: CTTCCTGCCATCATCAGGAATGACTAAATCTTGGAGCGTTCTCCATTTAAGTGAGGGAAATGTTGGATTCCCGGTGTATTTATCACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp CTAGGTACTTTGGGTGGTTTTCAAGAATGTATCTATCGATGCCCATaGAGAAGTCATCTTGAACAAGGGCATCTGTCCTTTCTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: LGTLGGFQECIYRCP*RSHLEQGHLSFLPP
Trigger: AGGAGGAAGAAAGGACAGATGCCCTTGTTCAAGATGACTTCTTCATGGGCATCGATAGATACATTCTTGAAAACCACCCAAAGTACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp GAACACAGCCTAACTGTGTTCCTCCCTCCACTTCTAACACCTGAATaGGATAAAAGCCTGCTTAACACAGCATGTAAAGAAAGACTGAGT +
Preference number: 1 (lower is better)
Translates to: EHSLTVFLPPLLTPE*DKSLLNTACKERLS
Trigger: ACTCAGTCTTTCTTTACATGCTGTGTTAAGCAGGCTTTTATCTCATTCAGGTGTTAGAAGTGGAGGGAGGAACACAGTTAGGCTGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp TGTACAATGCACAGTTGCACTAGGGTCTCCTCTAGGTACTTTGGGTaGTTTTCAAGAATGTATCTATCGATGCCCATGAAGAAGTCATCT +
Preference number: 1 (lower is better)
Translates to: CTMHSCTRVSSRYFG*FSRMYLSMPMKKSS
Trigger: AGATGACTTCTTCATGGGCATCGATAGATACATTCTTGAAAACCACCCAAAGTACCTAGAGGAGACCCTAGTGCAACTGTGCATTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp GTACCTTTATCCCTGAGCTGGTGTGGCCAAACCATACCAACTCTGTaGGCCACATTGTTTAGAGTCATTAACAGTTTGTTTCTTTTACCT +
Preference number: 1 (lower is better)
Translates to: VPLSLSWCGQTIPTL*ATLFRVINSLFLLP
Trigger: AGGTAAAAGAAACAAACTGTTAATGACTCTAAACAATGTGGCCCACAGAGTTGGTATGGTTTGGCCACACCAGCTCAGGGATAAAGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 90 bp TTTTTATATAATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATaGAGCCATCTTGCTACCAGCTATAACCGGAACATACTCCTCACC +
Preference number: 1 (lower is better)
Translates to: FLYNDKLFRPKPHDA*SHLATSYNRNILLT
Trigger: GGTGAGGAGTATGTTCCGGTTATAGCTGGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATTATATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp TGTTGCTATTTACTGCTCACAAAATTTGGTTATTTCGCTAATGAATaGTTGTTAGCTAACAACCAAGGCCACACTCACCCACAGCACTGG +
Preference number: 1 (lower is better)
Translates to: CCYLLLTKFGYFANE*LLANNQGHTHPQHW
Trigger: CCAGTGCTGTGGGTGAGTGTGGCCTTGGTTGTTAGCTAACAACCATTCATTAGCGAAATAACCAAATTTTGTGAGCAGTAAATAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 90 bp CAACTATTCTTAAAGTGTGTTGCCCAGACTAGCAAAGGCATCATCTaGGAATGCATTTGTAATGCAAATTCTTGGGCCCTGACTCATATG +
Preference number: 1 (lower is better)
Translates to: QLFLKCVAQTSKGII*ECICNANSWALTHM
Trigger: CATATGAGTCAGGGCCCAAGAATTTGCATTACAAATGCATTCTCAGATGATGCCTTTGCTAGTCTGGGCAACACACTTTAAGAATAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 90 bp CAGCAGATTCTGTTACTATTAGTTACCAGGAATGAGACTTGCACTTaGGGATTCAAAATCAAATTGAGTTGTAGGGCAGTCACTTTGCAG +
Preference number: 1 (lower is better)
Translates to: QQILLLLVTRNETCT*GFKIKLSCRAVTLQ
Trigger: CTGCAAAGTGACTGCCCTACAACTCAATTTGATTTTGAATCCGCAAGTGCAAGTCTCATTCCTGGTAACTAATAGTAACAGAATCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 90 bp ACAGTTTGTTTCTTTTACCTCATCAGTTGTTGTACAATGCACAGTTaGACTAGGGTCTCCTCTAGGTACTTTGGGTGGTTTTCAAGAATG +
Preference number: 1 (lower is better)
Translates to: TVCFFYLISCCTMHS*TRVSSRYFGWFSRM
Trigger: CATTCTTGAAAACCACCCAAAGTACCTAGAGGAGACCCTAGTGCAACTGTGCATTGTACAACAACTGATGAGGTAAAAGAAACAAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 90 bp ATACATCAGCAGATTCTGTTACTATTAGTTACCAGGAATGAGACTTaGACTTGCGGATTCAAAATCAAATTGAGTTGTAGGGCAGTCACT +
Preference number: 1 (lower is better)
Translates to: IHQQILLLLVTRNET*TCGFKIKLSCRAVT
Trigger: AGTGACTGCCCTACAACTCAATTTGATTTTGAATCCGCAAGTGCAAGTCTCATTCCTGGTAACTAATAGTAACAGAATCTGCTGATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 90 bp AAAGAGATAATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTaGATTCTAATCTCAGCTCTACCACAAATCAATTATACCAATGTG +
Preference number: 1 (lower is better)
Translates to: KEIMWYSGKDTRLGI*ILISALPQINYTNV
Trigger: CACATTGGTATAATTGATTTGTGGTAGAGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACATTATCTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR GCA 90 bp ATAATAGTACTTTATGGGGTTTCCCAGGGATCAAATGAGATAAAGTaGTTTGCACAGGACCTGGCAAATGGTAAGTCTTATTATTATTAT +
Preference number: 1 (lower is better)
Translates to: IIVLYGVSQGSNEIK*FAQDLANGKSYYYY
Trigger: ATAATAATAATAAGACTTACCATTTGCCAGGTCCTGTGCAAAGCACTTTATCTCATTTGATCCCTGGGAAACCCCATAAAGTACTATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAGGCGGAGGCTGCAGTaGGCCGAGATCGCGCCACCG +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSERRRLQ*AEIAPP
Trigger: CGGTGGCGCGATCTCGGCTCACTGCAGCCTCCGCCT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR-3UTR CCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCACTCAGCAGTGGGTGCTaGCATGACCCTCTAAAAGGC +
Preference number: 2 (lower is better)
Translates to: YRGPGPVHECTGQPRTPALSSGC*HDPLKG
Trigger: GCCTTTTAGAGGGTCATGCCAGCACCCACTGCTGAG...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCATGTGCGACTCTCATATaGGGATCCTGTCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: YRGPGPVHECTGQPRTPACATLI*GSCPQV
Trigger: CACCTGAGGACAGGATCCGCATATGAGAGTCGCACA...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGGACTGGCTGAGTGGCTaGAAGGTGCGACGGCTGACC +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEDWLSG*KVRRLT
Trigger: GGTCAGCCGTCGCACCTTCCAGCCACTCAGCCAGTC...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCAGGGACTGGCTGAGTaGCTGGAAGGTGCGACGGCT +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEQGLAE*LEGATA
Trigger: AGCCGTCGCACCTTCCAGCCACTCAGCCAGTCCCTG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR-3UTR TCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAAACAAAAGGAGCAAGTaGGGTGGGGTCACTGTGTAT +
Preference number: 2 (lower is better)
Translates to: YRGPGPVHECTGQPRTPANKRSK*GGVTVY
Trigger: ATACACAGTGACCCCACCTCACTTGCTCCTTTTGTT...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCAGCACACTGTCTGCTaGAGTGCGATACCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEQHTVC*SAIPGF
Trigger: GAAGCCAGGTATCGCACTTCAGCAGACAGTGTGCTG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
ENST00000503315.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
3UTR-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCCTGATGGTGCTTACTaGGTTCCACTCTGGTGTCGG +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEPDGAY*VPLWCR
Trigger: CCGACACCAGAGTGGAACCCAGTAAGCACCATCAGG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
ENST00000503315.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
3UTR-3UTR CCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCACCTGACTCATATGTATaGAATCAGATATTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: YRGPGPVHECTGQPRTPAPDSYV*NQIFWG
Trigger: CCCCCAGAATATCTGATTCCATACATATGAGTCAGG...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGTGTGCGACTCTCATATaGGGATCCTGTCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSECATLI*GSCPQV
Trigger: CACCTGAGGACAGGATCCGCATATGAGAGTCGCACA...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR-3UTR TCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACAGCACTGGAGCCATTTaGACTGTGAGAGTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHSTGAI*TVRVGE
Trigger: TTCTCCAACTCTCACAGTTCAAATGGCTCCAGTGCT...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATGGATACACAGTGGGCTaGGCAAAACTTGGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHGYTVG*AKLGVR
Trigger: CCTGACTCCAAGTTTTGCTCAGCCCACTGTGTATCC...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAAGGATCCTCAGCCATaGAAAAGGGAAGCGCCTTTC +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEKDPQP*KREAPF
Trigger: GAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
ENST00000503315.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
3UTR-3UTR CCA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCTGGGCCTCTCTTGCATaGATCGTTTCCTTAACCTCC +
Preference number: 2 (lower is better)
Translates to: AQGHTVMGALSILFLKSCWASLA*IVSLTS
Trigger: GGAGGTTAAGGAAACGATCCATGCAAGAGAGGCCCA...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308077.9
3UTR-3UTR CCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAAACACCTTGGGGATTTaGAGTTCAACATATGAGTTT +
Preference number: 2 (lower is better)
Translates to: YRGPGPVHECTGQPRTPANTLGI*SSTYEF
Trigger: AAACTCATATGTTGAACTCCAAATCCCCAAGGTGTT...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCTTTTTCCCTCACTTTaGCCAGCACTTCCTCCGAGA +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSELFPSL*PALPPR
Trigger: TCTCGGAGGAAGTGCTGGCCAAAGTGAGGGAAAAAG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR CAA 90 bp ATGGTGGGTCCTGCAGAAGTGAGCTTCATGCTACTGATTATTTACTaGCAAAGTGGGCGTTGTGCCTGGGTGATACCCTGCCTCCCTATG +
Preference number: 2 (lower is better)
Translates to: MVGPAEVSFMLLIIY*QSGRCAWVIPCLPM
Trigger: CATAGGGAGGCAGGGTATCACCCAGGCACAACGCCCACTTTGCAAGTAAATAATCAGTAGCATGAAGCTCACTTCTGCAGGACCCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGGGCATGAGAATTGCTTaGACCCAGGAGGCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: CCLGVRATLGIERQGDAVGMRIA*TQEAEV
Trigger: AACTTCTGCCTCCTGGGTTCAAGCAATTCTCATGCC...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATCTGGATGGACAAATGTaGGCCAGATTAGGAAGGACC +
Preference number: 2 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHLDGQM*ARLGRT
Trigger: GGTCCTTCCTAATCTGGCCCACATTTGTCCATCCAG...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGACGAAAAGCTGTCCATaGGGGACCAATATGACCACC +
Preference number: 2 (lower is better)
Translates to: CCLGVRATLGIERQGDAVTKSCP*GTNMTT
Trigger: GGTGGTCATATTGGTCCCCCATGGACAGCTTTTCGT...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCCTCAGATCCATAGGTaGACTGAAACCAGGGTTACT +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEPQIHR*TETRVT
Trigger: AGTAACCCTGGTTTCAGTCCACCTATGGATCTGAGG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR CAA 90 bp TCAGCTCTGCTACTGACAGCAAAGCAGGAAGTTGGCCAGGGATTATaGAGAATACATGCACACAGCCAGCACTTGGGCAGGCAATACAGA +
Preference number: 2 (lower is better)
Translates to: SALLLTAKQEVGQGL*RIHAHSQHLGRQYR
Trigger: TCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTATTCTCAATAATCCCTGGCCAACTTCCTGCTTTGCTGTCAGTAGCAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTAGGGAAGCGCCTTTCTaGGGGAGCCAAGCTTGCATC +
Preference number: 2 (lower is better)
Translates to: MWYSGKDTRLGIWILISAREAPF*GSQACI
Trigger: GATGCAAGCTTGGCTCCCTCAGAAAGGCGCTTCCCT...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR-3UTR TCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCCTCAGGTGGGATTGTaGTCTCAGACCTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: NDKLFRPKPHDACSHLATPQVGL*SQTWIQ
Trigger: CTGAATCCAGGTCTGAGATCACAATCCCACCTGAGG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGATTCAGACCCTGCACTaGGTGTATGGTATTAGAGAC +
Preference number: 2 (lower is better)
Translates to: CCLGVRATLGIERQGDAVIQTLH*VYGIRD
Trigger: GTCTCTAATACCATACACTCAGTGCAGGGTCTGAAT...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGTGTTCAGGTTTAAGATaGGAGCCTGTTCAGCTGTCA +
Preference number: 2 (lower is better)
Translates to: CCLGVRATLGIERQGDAVCSGLR*EPVQLS
Trigger: TGACAGCTGAACAGGCTCTCATCTTAAACCTGAACA...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGTTTGCCATCTCATTCTaGTTCAGAGCTAATGCCACA +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEFAISF*FRANAT
Trigger: TGTGGCATTAGCTCTGAATCAGAATGAGATGGCAAA...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR-3UTR GCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACCAGCCACTATCTGCTTaGTTTATATTCCCTATCTCA +
Preference number: 2 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHQPLSA*FIFPIS
Trigger: TGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTG...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCTGAAGTGCGATACCTaGCTTCTTAGGAAAGGTAAT +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSELKCDT*LLRKGN
Trigger: ATTACCTTTCCTAAGAAGCCAGGTATCGCACTTCAG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
ENST00000503315.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
3UTR-3UTR CCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACAAAAATAAGCCAGTGTaGTGGCACACAACTGTATTC +
Preference number: 2 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHKNKPV*WHTTVF
Trigger: GAATACAGTTGTGTGCCACCACACTGGCTTATTTTT...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACAAAGTCACTGAGTTTTaGAGTGTTTTCCACACAGCA +
Preference number: 2 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHKVTEF*SVFHTA
Trigger: TGCTGTGTGGAAAACACTCCAAAACTCAGTGACTTT...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCAGGGACTGGCTGAGTaGCTGGAAGGTGCGACGGCT +
Preference number: 2 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKQGLAE*LEGATA
Trigger: AGCCGTCGCACCTTCCAGCCACTCAGCCAGTCCCTG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR-3UTR CCA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAATCGATTTGCAGGCACTaGGGGTATCCACGACCCCCA +
Preference number: 2 (lower is better)
Translates to: LLAELRLHKTSASKLCRKSICRH*GYPRPP
Trigger: TGGGGGTCGTGGATACCCCCAGTGCCTGCAAATCGA...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR CAA 90 bp CCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGTTGAGATaGGGCCTCTCTTGCATGGATCGTTTCCTTAACCTCCTGAATTCA +
Preference number: 2 (lower is better)
Translates to: PEAVTLLLGHSLQLR*GLSCMDRFLNLLNS
Trigger: TGAATTCAGGAGGTTAAGGAAACGATCCATGCAAGAGAGGCCCAATCTCAACTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308077.9
3UTR CAA 90 bp ATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTaGCTACCAGCTATAACCGGAACATACTCCTCACCCTACCTGACA +
Preference number: 2 (lower is better)
Translates to: MTSFLGQSLMMHAAI*LPAITGTYSSPYLT
Trigger: TGTCAGGTAGGGTGAGGAGTATGTTCCGGTTATAGCTGGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGAGGGAAGCGCCTTTCTaGGGGAGCCAAGCTTGCATC +
Preference number: 2 (lower is better)
Translates to: YEGREFVSLNGAVQCFTEREAPF*GSQACI
Trigger: GATGCAAGCTTGGCTCCCTCAGAAAGGCGCTTCCCT...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR-3UTR TCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACAGTCATAGACATATATaGTGGCAGAGCAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHSHRHI*WQSNEK
Trigger: TTTCTCATTGCTCTGCCATCATATATGTCTATGACT...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATGAAGAAAACAGACAGTaGCAGGCATATGATAAGCAC +
Preference number: 2 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHEENRQ*QAYDKH
Trigger: GTGCTTATCATATGCCTGTCACTGTCTGTTTTCTTC...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGAAGGATCCTCAGCCATaGAAAAGGGAAGCGCCTTTC +
Preference number: 2 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLKDPQP*KREAPF
Trigger: GAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTT...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCGTAGGGCAGTCACTTTaGAGGGGTTATGCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: NDKLFRPKPHDACSHLATVGQSL*RGYAFL
Trigger: AAGGAAGGCATAACCCCTGCAAAGTGACTGCCCTAC...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGCCAACTGCAATCATGTaGTCATTTGCCCAGTTATCT +
Preference number: 2 (lower is better)
Translates to: CCLGVRATLGIERQGDAVPTAIM*SFAQLS
Trigger: AGATAACTGGGCAAATGACCACATGATTGCAGTTGG...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGATCCACGACCCCCAGTaGTCACCACTGCACCCACGT +
Preference number: 2 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKIHDPQ*SPLHPR
Trigger: ACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGAT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR CAA 90 bp CCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGTTGAGATaGGGCCTCTCTTGCATGGATCGTTTCCTTAACCTGAAAGATGAA +
Preference number: 2 (lower is better)
Translates to: PEAVTLLLGHSLQLR*GLSCMDRFLNLKDE
Trigger: TTCATCTTTCAGGTTAAGGAAACGATCCATGCAAGAGAGGCCCAATCTCAACTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp GAAGTTGGCCAGGGATTATTGAGAATACATGCACACAGCCAGCACTaGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: EVGQGLLRIHAHSQH*GRQYRDKVKNMTSS
Trigger: GCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTATTCTCAATAATCCCTGGCCAACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATCAGCACACTGTCTGCTaGAGTGCGATACCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LHVLCASHYLLALYSLSHQHTVC*SAIPGF
Trigger: GAAGCCAGGTATCGCACTTCAGCAGACAGTGTGCTG...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAGTCATAGACATATATaGTGGCAGAGCAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSESHRHI*WQSNEK
Trigger: TTTCTCATTGCTCTGCCATCATATATGTCTATGACT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503315.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
3UTR-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAGAGAATTTCTCCTTTaGGTAGAGCTTCTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEREFLL*VELLLL
Trigger: TAAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR-3UTR GCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGACTGGGGCATGAGAATTaGTTGAACCCAGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LDSINSLVGLGSARENSRLGHEN*LNPGGR
Trigger: TCTGCCTCCTGGGTTCAAGCAATTCTCATGCCCCAG...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCCCAGTGGTCACCACTaGACCCACGTGCAACTAGAG +
Preference number: 2 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKPSGHH*THVQLE
Trigger: CTCTAGTTGCACGTGGGTGCAGTGGTGACCACTGGG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR-3UTR CCA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCACTAGACTAGGAATCTaGATTCTAATCTCAGCTCTA +
Preference number: 2 (lower is better)
Translates to: AQGHTVMGALSILFLKSCTRLGI*ILISAL
Trigger: TAGAGCTGAGATTAGAATCCAGATTCCTAGTCTAGT...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR-3UTR CCA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGCTGGGCAGCAGGGATTaGGAAGCTTGTTGCTATTTA +
Preference number: 2 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLLGSRD*EACCYL
Trigger: TAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAG...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATCTAATACCAACACCTTaGGGATTTGGAGTTCAACAT +
Preference number: 2 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHLIPTP*GFGVQH
Trigger: ATGTTGAACTCCAAATCCCCAAGGTGTTGGTATTAG...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGCAAGACACCAGCATTTaGTGTCTAGTGAGAGCCCAT +
Preference number: 2 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLQDTSI*CLVRAH
Trigger: ATGGGCTCTCACTAGACACCAAATGCTGGTGTCTTG...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp ACAGGTGGAATGGACCAGTTTTTCCAGTCGGCTGGGCAGCAGGGATaGGGAAGCTTGTTGCTATTTACTGCTCACAAAATTTGGTTATTT +
Preference number: 2 (lower is better)
Translates to: TGGMDQFFQSAGQQG*GSLLLFTAHKIWLF
Trigger: AAATAACCAAATTTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGCCGACTGGAAAAACTGGTCCATTCCACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp GCCATGACCTCGCTTAAAGGAAGGGGTGACCAAATTTCTTTGGGCTaGTTTTATAATGACACAAATCCCATTCATGAGGGCACCACCCTA +
Preference number: 2 (lower is better)
Translates to: AMTSLKGRGDQISLG*FYNDTNPIHEGTTL
Trigger: TAGGGTGGTGCCCTCATGAATGGGATTTGTGTCATTATAAAACAAGCCCAAAGAAATTTGGTCACCCCTTCCTTTAAGCGAGGTCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp ATTCCGCCTATCTGTCTCAGAACCTTTAAAATGGGGTCAGGAAATTaGCTACTTGGGCTTAGCAATGTGCTGGTTGTCTTTGTCCCACAC +
Preference number: 2 (lower is better)
Translates to: IPPICLRTFKMGSGN*LLGLSNVLVVFVPH
Trigger: GTGTGGGACAAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCATTTTAAAGGTTCTGAGACAGATAGGCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCAGCACACTGTCTGCTaGAGTGCGATACCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKQHTVC*SAIPGF
Trigger: GAAGCCAGGTATCGCACTTCAGCAGACAGTGTGCTG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
3UTR-3UTR TCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCCCTCAGGTGGGATTGTaGTCTCAGACCTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: YCMYYVPATICLLYIPYLPQVGL*SQTWIQ
Trigger: CTGAATCCAGGTCTGAGATCACAATCCCACCTGAGG...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR-3UTR TCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATCTTCTGCTCACTGGTaGCCAGACACGGTAAAATTC +
Preference number: 2 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTSSAHW*PDTVKF
Trigger: GAATTTTACCGTGTCTGGTCACCAGTGAGCAGAAGA...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCATGGGGGACCAATATaGCCACCAACATTGTTATAC +
Preference number: 2 (lower is better)
Translates to: NDKLFRPKPHDACSHLATHGGPI*PPTLLY
Trigger: GTATAACAATGTTGGTGGTCATATTGGTCCCCCATG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGGTTTTTCCAGTCGGCTaGGCAGCAGGGATTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEVFPVG*AAGIGK
Trigger: CTTCCCAATCCCTGCTGCCCAGCCGACTGGAAAAAC...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGATGGGAACAGGTGGAATaGACCAGTTTTTCCAGTCGG +
Preference number: 2 (lower is better)
Translates to: LDSINSLVGLGSARENSRWEQVE*TSFSSR
Trigger: CCGACTGGAAAAACTGGTCCATTCCACCTGTTCCCA...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCACAGTTCTGAAGGCTaGGAAATCCAAGAACAAGAC +
Preference number: 2 (lower is better)
Translates to: NDKLFRPKPHDACSHLATHSSEG*EIQEQD
Trigger: GTCTTGTTCTTGGATTTCCCAGCCTTCAGAACTGTG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp TCCCTGAGCTGGTGTGGCCAAACCATACCAACTCTGTGGGCCACATaGTTTAGAGTCATTAACAGTTTGTTTCTTTTACCTCATCAGTTG +
Preference number: 2 (lower is better)
Translates to: SLSWCGQTIPTLWAT*FRVINSLFLLPHQL
Trigger: CAACTGATGAGGTAAAAGAAACAAACTGTTAATGACTCTAAACAATGTGGCCCACAGAGTTGGTATGGTTTGGCCACACCAGCTCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGACTCCTTTTTCCCCTCTaGAAAGAGATAATGTGGTAC +
Preference number: 2 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRLLFPL*KEIMWY
Trigger: GTACCACATTATCTCTTTTCAGAGGGGAAAAAGGAG...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACAAGTTCAGCAGCGCTTTaGTCCTCTTTCATTAGCAAC +
Preference number: 2 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTSSAAL*SSFISN
Trigger: GTTGCTAATGAAAGAGGATCAAAGCGCTGCTGAACT...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCTGTTTCTTAAGAGCTaGTCCTTTTTCCCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: NDKLFRPKPHDACSHLATLFLKS*SFFPSE
Trigger: TTCAGAGGGGAAAAAGGAGCAGCTCTTAAGAAACAG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCTGAAGTGCGATACCTaGCTTCTTAGGAAAGGTAAT +
Preference number: 2 (lower is better)
Translates to: NDKLFRPKPHDACSHLATLKCDT*LLRKGN
Trigger: ATTACCTTTCCTAAGAAGCCAGGTATCGCACTTCAG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGATTTGTTTCTCTAAATaGGGCTGTTCAATGTTTCAC +
Preference number: 2 (lower is better)
Translates to: CCLGVRATLGIERQGDAVICFSK*GCSMFH
Trigger: GTGAAACATTGAACAGCCCCATTTAGAGAAACAAAT...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACAGTTTCTGGGAACAGGTaGAATGGACCAGTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTVSGNR*NGPVFP
Trigger: TGGAAAAACTGGTCCATTCCACCTGTTCCCAGAAAC...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGAAGAGTTGGAGCTGGATaGACAAATGTGGGCCAGATT +
Preference number: 2 (lower is better)
Translates to: LDSINSLVGLGSARENSRRVGAG*TNVGQI
Trigger: AATCTGGCCCACATTTGTCCATCCAGCTCCAACTCT...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp TGCTATTTACTGCTCACAAAATTTGGTTATTTCGCTAATGAATGGTaGTTAGCTAACAACCAAGGCCACACTCACCCACAGCACTGGAGC +
Preference number: 2 (lower is better)
Translates to: CYLLLTKFGYFANEW*LANNQGHTHPQHWS
Trigger: GCTCCAGTGCTGTGGGTGAGTGTGGCCTTGGTTGTTAGCTAACAACCATTCATTAGCGAAATAACCAAATTTTGTGAGCAGTAAATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp ACTTATCCCAACTGCAATCATGTGGTCATTTGCCCAGTTATCTTTTaGATGTCTGTTGCTCTTGCAGAATGCAAGCTCCATGGGAACAGA +
Preference number: 2 (lower is better)
Translates to: TYPNCNHVVICPVIF*MSVALAECKLHGNR
Trigger: TCTGTTCCCATGGAGCTTGCATTCTGCAAGAGCAACAGACATCAAAAAGATAACTGGGCAAATGACCACATGATTGCAGTTGGGATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp TTAGTTACCAGGAATGAGACTTGCACTTGCGGATTCAAAATCAAATaGAGTTGTAGGGCAGTCACTTTGCAGGGGTTATGCCTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: LVTRNETCTCGFKIK*SCRAVTLQGLCLPS
Trigger: TGAAGGAAGGCATAACCCCTGCAAAGTGACTGCCCTACAACTCAATTTGATTTTGAATCCGCAAGTGCAAGTCTCATTCCTGGTAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp GTGCTCACGTGTACACGCACATGGACACATTGCATGATACTTACATaGGTCTACTTTCTGCAGAGGATCAACTTTACTGCTTTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: VLTCTRTWTHCMILT*VYFLQRINFTAFSL
Trigger: AAGAGAGAAAGCAGTAAAGTTGATCCTCTGCAGAAAGTAGACCAATGTAAGTATCATGCAATGTGTCCATGTGCGTGTACACGTGAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 90 bp AAATGGGGTCAGGAAATTTGCTACTTGGGCTTAGCAATGTGCTGGTaGTCTTTGTCCCACACTCTGCATCTATCTAGGTGTTTTGCATAT +
Preference number: 2 (lower is better)
Translates to: KWGQEICYLGLAMCW*SLSHTLHLSRCFAY
Trigger: ATATGCAAAACACCTAGATAGATGCAGAGTGTGGGACAAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGATTTTGGAGGTGGCAATaGAGAGTCTGCAGCAATCTT +
Preference number: 2 (lower is better)
Translates to: LDSINSLVGLGSARENSRFWRWQ*RVCSNL
Trigger: AAGATTGCTGCAGACTCTTCATTGCCACCTCCAAAA...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTCCAGGAGGCAGAAGTTaGAGTGAGCTGAGATCACAC +
Preference number: 2 (lower is better)
Translates to: LWVILVKSHVVLPQLALVPGGRS*SELRSH
Trigger: GTGTGATCTCAGCTCACTGCAACTTCTGCCTCCTGG...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCAGGAGAGACCGGATATaGAGAAAAAGATCTGTAACA +
Preference number: 2 (lower is better)
Translates to: NDKLFRPKPHDACSHLATRRDRI*RKRSVT
Trigger: TGTTACAGATCTTTTTCTCCATATCCGGTCTCTCCT...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp CACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGCATCAGAGCTTTGCACAGGACCTaGCAAATGGTAAGTCTTATT +
Preference number: 2 (lower is better)
Translates to: HLGRQYRDKVKNMTSSIRALHRT*QMVSLI
Trigger: AATAAGACTTACCATTTGCCAGGTCCTGTGCAAAGC...TCTGATGCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAACTGAAGTGCGATACCTaGCTTCTTAGGAAAGGTAAT +
Preference number: 2 (lower is better)
Translates to: LLAELRLHKTSASKLCRKLKCDT*LLRKGN
Trigger: ATTACCTTTCCTAAGAAGCCAGGTATCGCACTTCAG...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR-3UTR CCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGAAGGAGCAAGTGAGGTaGGGTCACTGTGTATCTTCT +
Preference number: 2 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEKEQVR*GHCVSS
Trigger: AGAAGATACACAGTGACCCCACCTCACTTGCTCCTT...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGATCTGTCTTTTCCCTGTaGCATGTAGAGTCTTTCGTA +
Preference number: 2 (lower is better)
Translates to: LDSINSLVGLGSARENSRSVFSL*HVESFV
Trigger: TACGAAAGACTCTACATGCCACAGGGAAAAGACAGA...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCCTCAGATCCATAGGTaGACTGAAACCAGGGTTACT +
Preference number: 2 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKPQIHR*TETRVT
Trigger: AGTAACCCTGGTTTCAGTCCACCTATGGATCTGAGG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR-3UTR TCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCTCCTTTTTCCCCTCTaGAAAGAGATAATGTGGTAC +
Preference number: 2 (lower is better)
Translates to: YEGREFVSLNGAVQCFTELLFPL*KEIMWY
Trigger: GTACCACATTATCTCTTTTCAGAGGGGAAAAAGGAG...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR-3UTR TCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACAAACCAGAACTATCCCTaGTATCACCTAATTAAGAAG +
Preference number: 2 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTNQNYP*YHLIKK
Trigger: CTTCTTAATTAGGTGATATCAGGGATAGTTCTGGTT...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR GCA 90 bp CACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGCATCAGAGATGATGACTATAACTaGATGAGAACCCGAATAAGA +
Preference number: 2 (lower is better)
Translates to: HLGRQYRDKVKNMTSSIRDDDYN*MRTRIR
Trigger: TCTTATTCGGGTTCTCATGCAGTTATAGTCATCATC...TCTGATGCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCCTGAAGTGCGATACCTaGCTTCTTAGGAAAGGTAAT +
Preference number: 2 (lower is better)
Translates to: YCMYYVPATICLLYIPYLLKCDT*LLRKGN
Trigger: ATTACCTTTCCTAAGAAGCCAGGTATCGCACTTCAG...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR CAA 90 bp ATTTATACTTTTGGGCAAGACTCATGGCCCACTGAATTTGATATTTaGACTCTAAGGGTGTATCACAGGCTGTGGAATGAAAGGGGTATA +
Preference number: 2 (lower is better)
Translates to: IYTFGQDSWPTEFDI*TLRVYHRLWNERGI
Trigger: TATACCCCTTTCATTCCACAGCCTGTGATACACCCTTAGAGTCAAAATATCAAATTCAGTGGGCCATGAGTCTTGCCCAAAAGTATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAAAGTCATAGACATATATaGTGGCAGAGCAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: LLAELRLHKTSASKLCRKSHRHI*WQSNEK
Trigger: TTTCTCATTGCTCTGCCATCATATATGTCTATGACT...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGTTTGCCATCTCATTCTaGTTCAGAGCTAATGCCACA +
Preference number: 2 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKFAISF*FRANAT
Trigger: TGTGGCATTAGCTCTGAATCAGAATGAGATGGCAAA...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR CAA 90 bp GGGGAGAAAACAGACTATCTACTACAGTTTCACAGAATTTATTCTTaGAAATTCCTACCACTGAGATGGGATATATGCTCCCTCCATTTG +
Preference number: 2 (lower is better)
Translates to: GEKTDYLLQFHRIYS*KFLPLRWDICSLHL
Trigger: CAAATGGAGGGAGCATATATCCCATCTCAGTGGTAGGAATTTCAAAGAATAAATTCTGTGAAACTGTAGTAGATAGTCTGTTTTCTCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGAGTCATAGACATATATaGTGGCAGAGCAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKSHRHI*WQSNEK
Trigger: TTTCTCATTGCTCTGCCATCATATATGTCTATGACT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
3UTR-3UTR CCA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAACTAGACTAGGAATCTaGATTCTAATCTCAGCTCTA +
Preference number: 2 (lower is better)
Translates to: ELWVILVKSHVVLPQLALTRLGI*ILISAL
Trigger: TAGAGCTGAGATTAGAATCCAGATTCCTAGTCTAGT...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp GCACTGGGGGTATCCACGACCCCCAGTGGTCACCACTaGACCCACGTGCAACTAGAGGGCGAGGGTGCGCTC +
Preference number: 3 (lower is better)
Translates to: ALGVSTTPSGHH*THVQLEGEGAL
Trigger: GAGCGCACCCTCGCCCTCTAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR TCA 72 bp GGCAGGCCCGCAGTTCACAGACCAGTTCACAGACCGTaGTGCCTTGCAGGCCATCTCAGAGGCCCCTGGTTC +
Preference number: 3 (lower is better)
Translates to: GRPAVHRPVHRP*CLAGHLRGPWF
Trigger: GAACCAGGGGCCTCTGAGATGGCCTGCAAGGCATCACGGTCTGTGAACTGGTCTGTGAACTGCGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp CGATTTGCAGGCACTGGGGGTATCCACGACCCCCAGTaGTCACCACTGCACCCACGTGCAACTAGAGGGCGA +
Preference number: 3 (lower is better)
Translates to: RFAGTGGIHDPQ*SPLHPRATRGR
Trigger: TCGCCCTCTAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGCCTGCAAATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR TCA 72 bp CATTACTGCAAGATACAGGGGCCCTGGTCCAGTACATaGATGCACTGGCCAACCCAGGACCCCCGCACAGGC +
Preference number: 3 (lower is better)
Translates to: HYCKIQGPWSST*MHWPTQDPRTG
Trigger: GCCTGTGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTATCTTGCAGTAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp GGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTaGTGGCATGACCCTCTAAAAGGCCTGCTGGGCCCA +
Preference number: 3 (lower is better)
Translates to: GQMVETTDLSSG*WHDPLKGLLGP
Trigger: TGGGCCCAGCAGGCCTTTTAGAGGGTCATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp CAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTaGCATGACCCTCTAAAAGGCCTGCTGGGCCCAACA +
Preference number: 3 (lower is better)
Translates to: QMVETTDLSSGC*HDPLKGLLGPT
Trigger: TGTTGGGCCCAGCAGGCCTTTTAGAGGGTCATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp GAAAGTCAGCTGGGCAAGGCAGGCCAAGCGGGGAGGTaGGCAGTTCAGCAGCGCTTTGATCCTCTTTCATTA +
Preference number: 3 (lower is better)
Translates to: ESQLGKAGQAGR*AVQQRFDPLSL
Trigger: TAATGAAAGAGGATCAAAGCGCTGCTGAACTGCTCACCTCCCCGCTTGGCCTGCCTTGCCCAGCTGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAGTAGTTTTGCCACAATaGGCCTTAGTTTGTATGGAT +
Preference number: 3 (lower is better)
Translates to: YRGPGPVHECTGQPRTPAVVLPQ*ALVCMD
Trigger: ATCCATACAAACTAAGGCCAATTGTGGCAAAACTAC...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGACTTTTTCCCTCACTTaGGCCAGCACTTCCTCCGAG +
Preference number: 3 (lower is better)
Translates to: DQVPSRILSHAKGKRLSETFSLT*ASTSSE
Trigger: CTCGGAGGAAGTGCTGGCCAAAGTGAGGGAAAAAGT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR TCA 72 bp AGGCCAAGCGGGGAGGTGAGCAGTTCAGCAGCGCTTTaGTCCTCTTTCATTAGCAACTTGAAAGTCACCTGG +
Preference number: 3 (lower is better)
Translates to: RPSGEVSSSAAL*SSFISNLKVTW
Trigger: CCAGGTGACTTTCAAGTTGCTAATGAAAGAGGATCAAAGCGCTGCTGAACTGCTCACCTCCCCGCTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp ATAAATAAAAGTCACCCAAGGCGGGAGGGATGTTCCTaGAGACGAACGTCGCCCCATCTGAGGGAGCACTAC +
Preference number: 3 (lower is better)
Translates to: INKSHPRREGCS*RRTSPHLREHY
Trigger: GTAGTGCTCCCTCAGATGGGGCGACGTTCGTCTTCAGGAACATCCCTCCCGCCTTGGGTGACTTTTATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486995.5
3UTR GCA 72 bp CATGCTACTGATTATTTACTTGCAAAGTGGGCGTTGTaGCTGGGTGATACCCTGCCTCCCTATGCAGTGCAG +
Preference number: 3 (lower is better)
Translates to: HATDYLLAKWAL*LGDTLPPYAVQ
Trigger: CTGCACTGCATAGGGAGGCAGGGTATCACCCAGGCACAACGCCCACTTTGCAAGTAAATAATCAGTAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp GAAGAGGGGCGTAGAGTAGCAAGAGTTGGAGCTGGATaGACAAATGTGGGCCAGATTAGGAAGGACCTTCTA +
Preference number: 3 (lower is better)
Translates to: EEGRRVARVGAG*TNVGQIRKDLL
Trigger: TAGAAGGTCCTTCCTAATCTGGCCCACATTTGTCCATCCAGCTCCAACTCTTGCTACTCTACGCCCCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGTGTATTCCCAGCTACTaGGGAGGCTGGGGCATGAGA +
Preference number: 3 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLCIPSY*GGWGMR
Trigger: TCTCATGCCCCAGCCTCCCAAGTAGCTGGGAATACA...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGAGGCAGGCAGATCACTaGAGGATAAGAGTTAGAGAC +
Preference number: 3 (lower is better)
Translates to: CCLGVRATLGIERQGDAVRQADH*RIRVRD
Trigger: GTCTCTAACTCTTATCCTCAAGTGATCTGCCTGCCT...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp ACTCTCATATGCGGATCCTGTCCTCAGGTGGGATTGTaGTCTCAGACCTGGATTCAGCAAACACCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: TLICGSCPQVGL*SQTWIQQTPEA
Trigger: AGCTTCAGGTGTTTGCTGAATCCAGGTCTGAGATCACAATCCCACCTGAGGACAGGATCCGCATATGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR TCA 72 bp AATGAAGAGTCTGCAGCAATCTTGGCAGACAGCTCCTaGGGTCTGAGCAACCCTCTGGGCTTTCTGAAACAA +
Preference number: 3 (lower is better)
Translates to: NEESAAILADSS*GLSNPLGFLKQ
Trigger: TTGTTTCAGAAAGCCCAGAGGGTTGCTCAGACCTCAGGAGCTGTCTGCCAAGATTGCTGCAGACTCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp TGCCAGTCGCGGCCACAATCTGATGATGACTATAACTaGATGAGAACCCGAATAAGAACTGTCTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: CQSRPQSDDDYN*MRTRIRTVWLS
Trigger: GCTCAGCCAGACAGTTCTTATTCGGGTTCTCATGCAGTTATAGTCATCATCAGATTGTGGCCGCGACTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp GACAGCAAAATTGCACATGGCCCATTTAGTCCAGCTTaGTTGCCAACTCTTCTACTCAAAGACAGGGGGACC +
Preference number: 3 (lower is better)
Translates to: DSKIAHGPFSPA*LPTLLLKDRGT
Trigger: GGTCCCCCTGTCTTTGAGTAGAAGAGTTGGCAAGCAAGCTGGACTAAATGGGCCATGTGCAATTTTGCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp CTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATaGCACCTGAGTCTAGTGAAGAAAACAGACAGTGAC +
Preference number: 3 (lower is better)
Translates to: LGTQQTEQKGQT*HLSLVKKTDSD
Trigger: GTCACTGTCTGTTTTCTTCACTAGACTCAGGTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp CTACTGATTATTTACTTGCAAAGTGGGCGTTGTGCCTaGGTGATACCCTGCCTCCCTATGCAGTGCAGTAGA +
Preference number: 3 (lower is better)
Translates to: LLIIYLQSGRCA*VIPCLPMQCSR
Trigger: TCTACTGCACTGCATAGGGAGGCAGGGTATCACCCAGGCACAACGCCCACTTTGCAAGTAAATAATCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp GGGATTGTGATCTCAGACCTGGATTCAGCAAACACCTaGAGCTGTGACTCTCTTACTGGGACACAGTCTACA +
Preference number: 3 (lower is better)
Translates to: GIVISDLDSANT*SCDSLTGTQST
Trigger: TGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCAGGTCTGAGATCACAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR TCA 72 bp GTTCTGGCCACTCAACTCCAGACTCCTAGAGGTGTTTaGCCAAATGGCCATCAACCAGGTGTTTTGGGTTTT +
Preference number: 3 (lower is better)
Translates to: VLATQLQTPRGV*PNGHQPGVLGF
Trigger: AAAACCCAAAACACCTGGTTGATGGCCATTTGGTCAAACACCTCTAGGAGTCTGGAGTTGAGTGGCCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp CTGGGACACAGTCTACAGTTGAGATTGGGCCTCTCTTaGATGGATCGTTTCCTTAACCTCCTGAATTCAGCA +
Preference number: 3 (lower is better)
Translates to: LGHSLQLRLGLS*MDRFLNLLNSA
Trigger: TGCTGAATTCAGGAGGTTAAGGAAACGATCCATGCAAGAGAGGCCCAATCTCAACTGTAGACTGTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308077.9
3UTR GCA 72 bp AAAGGAGCAAGTGAGGTGGGGTCACTGTGTATCTTCTaGTCACTGGTGACCAGACACGGTAAAATTCAACAC +
Preference number: 3 (lower is better)
Translates to: KGASEVGSLCIF*SLVTRHGKIQH
Trigger: GTGTTGAATTTTACCGTGTCTGGTCACCAGTGAGCAGAAGATACACAGTGACCCCACCTCACTTGCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp AGTGAGCTTCATGCTACTGATTATTTACTTGCAAAGTaGGCGTTGTGCCTGGGTGATACCCTGCCTCCCTAT +
Preference number: 3 (lower is better)
Translates to: SELHATDYLLAK*ALCLGDTLPPY
Trigger: ATAGGGAGGCAGGGTATCACCCAGGCACAACGCCCACTTTGCAAGTAAATAATCAGTAGCATGAAGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGTGCCCAGTTATCTTTTaGATGTCTGTTGCTCTTGCA +
Preference number: 3 (lower is better)
Translates to: CCLGVRATLGIERQGDAVCPVIF*MSVALA
Trigger: TGCAAGAGCAACAGACATCAAAAAGATAACTGGGCA...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGGAGAGAATTTCTCCTTaGAGTAGAGCTTCTTCTCTT +
Preference number: 3 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEERISP*SRASSL
Trigger: AAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCTC...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAAATGGACACAGCTTTaGCCATCTCATTCTGATTCA +
Preference number: 3 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEKWTQL*PSHSDS
Trigger: TGAATCAGAATGAGATGGCAAAAGCTGTGTCCATTT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486995.5
ENST00000503315.5
3UTR-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAGTAGTCATTTAAATTaGGCTTACTCAGCAGTCCTA +
Preference number: 3 (lower is better)
Translates to: DQVPSRILSHAKGKRLSESSHLN*AYSAVL
Trigger: TAGGACTGCTGAGTAAGCCAAATTTAAATGACTACT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
3UTR-3UTR CAA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGCAGGGATTGGGAAGCTaGTTGCTATTTACTGCTCAC +
Preference number: 3 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLQGLGS*LLFTAH
Trigger: GTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTG...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp GGTTATGCCTTCCTTCATGCTGTCAATTGTAACAGATaGTGTTGCTGTCTAGGGGTAAGGGCTACTTTGGGG +
Preference number: 3 (lower is better)
Translates to: GYAFLHAVNCNR*CCCLGVRATLG
Trigger: CCCCAAAGTAGCCCTTACCCCTAGACAGCAACATCATCTGTTACAATTGACAGCATGAAGGAAGGCATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp CTGGGACACAGTCTACAGTTGAGATTGGGCCTCTCTTaGATGGATCGTTTCCTTAACCTGAAAGATGAAGGA +
Preference number: 3 (lower is better)
Translates to: LGHSLQLRLGLS*MDRFLNLKDEG
Trigger: TCCTTCATCTTTCAGGTTAAGGAAACGATCCATGCAAGAGAGGCCCAATCTCAACTGTAGACTGTGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp TGGGGTCAGGAAATTTGCTACTTGGGCTTAGCAATGTaGTGGTTGTCTTTGTCCCACACTCTGCATCTATCT +
Preference number: 3 (lower is better)
Translates to: WGQEICYLGLAM*WLSLSHTLHLS
Trigger: AGATAGATGCAGAGTGTGGGACAAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp GCAAAATTGCACATGGCCCATTTAGTCCAGCTTGCTTaGCAACTCTTCTACTCAAAGACAGGGGGACCTATT +
Preference number: 3 (lower is better)
Translates to: AKLHMAHLVQLA*QLFYSKTGGPI
Trigger: AATAGGTCCCCCTGTCTTTGAGTAGAAGAGTTGGCAAGCAAGCTGGACTAAATGGGCCATGTGCAATTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp TGGACCAGTTTTTCCAGTCGGCTGGGCAGCAGGGATTaGGAAGCTTGTTGCTATTTACTGCTCACAAAATTT +
Preference number: 3 (lower is better)
Translates to: WTSFSSRLGSRD*EACCYLLLTKF
Trigger: AAATTTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGCCGACTGGAAAAACTGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp TGTGTTGGGACAGAGATCTTGTCTGTCTTTTCCCTGTaGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTG +
Preference number: 3 (lower is better)
Translates to: CVGTEILSVFSL*HVESFVVPCPL
Trigger: CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAAGATCTCTGTCCCAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp GGTCAGGAAATTTGCTACTTGGGCTTAGCAATGTGCTaGTTGTCTTTGTCCCACACTCTGCATCTATCTAGG +
Preference number: 3 (lower is better)
Translates to: GQEICYLGLAMC*LSLSHTLHLSR
Trigger: CCTAGATAGATGCAGAGTGTGGGACAAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGGGCTGAGCAAAACTaGGAGTCAGGTCTAAATGTG +
Preference number: 3 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTWAEQN*ESGLNV
Trigger: CACATTTAGACCTGACTCCAAGTTTTGCTCAGCCCA...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp GGAATGAGACTTGCACTTGCGGATTCAAAATCAAATTaGGTTGTAGGGCAGTCACTTTGCAGGGGTTATGCC +
Preference number: 3 (lower is better)
Translates to: GMRLALADSKSN*VVGQSLCRGYA
Trigger: GGCATAACCCCTGCAAAGTGACTGCCCTACAACTCAATTTGATTTTGAATCCGCAAGTGCAAGTCTCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp GAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTaGTGTCTAGTGAGAGCCCATTTTCTGGTTCATAGA +
Preference number: 3 (lower is better)
Translates to: EGWEIQEQDTSI*CLVRAHFLVHR
Trigger: TCTATGAACCAGAAAATGGGCTCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp AATCCTCTTCAGTCTTCATGGCTACATGAGTCTCCCTaGGATGCGGTAGAATACATCAGCAGATTCTGTTAC +
Preference number: 3 (lower is better)
Translates to: NPLQSSWLHESP*DAVEYISRFCY
Trigger: GTAACAGAATCTGCTGATGTATTCTACCGCATCCCAGGGAGACTCATGTAGCCATGAAGACTGAAGAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp CACAGTTGCACTAGGGTCTCCTCTAGGTACTTTGGGTaGTTTTCAAGAATGTATCTATCGATGCCCATGAAG +
Preference number: 3 (lower is better)
Translates to: HSCTRVSSRYFG*FSRMYLSMPMK
Trigger: CTTCATGGGCATCGATAGATACATTCTTGAAAACCACCCAAAGTACCTAGAGGAGACCCTAGTGCAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp TCCCTGAGCTGGTGTGGCCAAACCATACCAACTCTGTaGGCCACATTGTTTAGAGTCATTAACAGTTTGTTT +
Preference number: 3 (lower is better)
Translates to: SLSWCGQTIPTL*ATLFRVINSLF
Trigger: AAACAAACTGTTAATGACTCTAAACAATGTGGCCCACAGAGTTGGTATGGTTTGGCCACACCAGCTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp TTTGATATTTTGACTCTAAGGGTGTATCACAGGCTGTaGAATGAAAGGGGTATAGGAGCCCAGAGCCACTCA +
Preference number: 3 (lower is better)
Translates to: FDILTLRVYHRL*NERGIGAQSHS
Trigger: TGAGTGGCTCTGGGCTCCTATACCCCTTTCATTCCACAGCCTGTGATACACCCTTAGAGTCAAAATATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGGCTGGGCAGCAGGGATaGGGAAGCTTGTTGCTATTT +
Preference number: 3 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEAGQQG*GSLLLF
Trigger: AAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGC...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp ATAAAAGCCTGCTTAACACAGCATGTAAAGAAAGACTaGGTTCTGGCCACTCAACTCCAGACTCCTAGAGGT +
Preference number: 3 (lower is better)
Translates to: IKACLTQHVKKD*VLATQLQTPRG
Trigger: ACCTCTAGGAGTCTGGAGTTGAGTGGCCAGAACTCAGTCTTTCTTTACATGCTGTGTTAAGCAGGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp CAACTGCCAGAAATACTAAGGAAGCCTTTGAGATTATaGCAGTCGCGGCCACAATCTGATGATGACTATAAC +
Preference number: 3 (lower is better)
Translates to: QLPEILRKPLRL*QSRPQSDDDYN
Trigger: GTTATAGTCATCATCAGATTGTGGCCGCGACTGGCATAATCTCAAAGGCTTCCTTAGTATTTCTGGCAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATaGAGCCATCTTGCTACCAGCTATAACCGGAACATA +
Preference number: 3 (lower is better)
Translates to: NDKLFRPKPHDA*SHLATSYNRNI
Trigger: TATGTTCCGGTTATAGCTGGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp CCTGACTCATATGTATGGAATCAGATATTCTGGGGGTaGGGCCCATCAATCTGTATTTTAACAAGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: PDSYVWNQIFWG*GPSICILTSSP
Trigger: TGGAGAGCTTGTTAAAATACAGATTGATGGGCCCCACCCCCAGAATATCTGATTCCATACATATGAGTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp GACCTATTCCGCCTATCTGTCTCAGAACCTTTAAAATaGGGTCAGGAAATTTGCTACTTGGGCTTAGCAATG +
Preference number: 3 (lower is better)
Translates to: DLFRLSVSEPLK*GQEICYLGLAM
Trigger: CATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCATTTTAAAGGTTCTGAGACAGATAGGCGGAATAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp TTAAAGTGTGTTGCCCAGACTAGCAAAGGCATCATCTaGGAATGCATTTGTAATGCAAATTCTTGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: LKCVAQTSKGII*ECICNANSWAL
Trigger: CAGGGCCCAAGAATTTGCATTACAAATGCATTCTCAGATGATGCCTTTGCTAGTCTGGGCAACACACTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp ACCAGCAAAAGGTCTTCCTTTATACATGCCACAGGGTaGTATGAAGATTACCCTAGACTTAGCACTTATCCC +
Preference number: 3 (lower is better)
Translates to: TSKRSSFIHATG*YEDYPRLSTYP
Trigger: GGGATAAGTGCTAAGTCTAGGGTAATCTTCATATCACCCTGTGGCATGTATAAAGGAAGACCTTTTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp CTTTATGGGGTTTCCCAGGGATCAAATGAGATAAAGTaGTTTGCACAGGACCTGGCAAATGGTAAGTCTTAT +
Preference number: 3 (lower is better)
Translates to: LYGVSQGSNEIK*FAQDLANGKSY
Trigger: ATAAGACTTACCATTTGCCAGGTCCTGTGCAAAGCACTTTATCTCATTTGATCCCTGGGAAACCCCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp TTCTTTTACCTCATCAGTTGTTGTACAATGCACAGTTaGACTAGGGTCTCCTCTAGGTACTTTGGGTGGTTT +
Preference number: 3 (lower is better)
Translates to: FFYLISCCTMHS*TRVSSRYFGWF
Trigger: AAACCACCCAAAGTACCTAGAGGAGACCCTAGTGCAACTGTGCATTGTACAACAACTGATGAGGTAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp TCTGTCTCAGAACCTTTAAAATGGGGTCAGGAAATTTaGTACTTGGGCTTAGCAATGTGCTGGTTGTCTTTG +
Preference number: 3 (lower is better)
Translates to: SVSEPLKWGQEI*YLGLAMCWLSL
Trigger: CAAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCATTTTAAAGGTTCTGAGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGAGTAGTCATTTAAATTaGGCTTACTCAGCAGTCCTA +
Preference number: 3 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLSSHLN*AYSAVL
Trigger: TAGGACTGCTGAGTAAGCCAAATTTAAATGACTACT...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACACTAAAATTTTCTGTGTaGGGACAGAGATCTTGTCTG +
Preference number: 3 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTLKFSV*GQRSCL
Trigger: CAGACAAGATCTCTGTCCCAACACAGAAAATTTTAG...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp GATTGGGCCTCTCTTGCATGGATCGTTTCCTTAACCTaGAAGATGAAGGAATTAATTAGGAGACTCAGAAGA +
Preference number: 3 (lower is better)
Translates to: DWASLAWIVSLT*KMKELIRRLRR
Trigger: TCTTCTGAGTCTCCTAATTAATTCCTTCATCTTTCAGGTTAAGGAAACGATCCATGCAAGAGAGGCCCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp TGGGCAGCAGGGATTGGGAAGCTTGTTGCTATTTACTaGTCACAAAATTTGGTTATTTCGCTAATGAATGGT +
Preference number: 3 (lower is better)
Translates to: WAAGIGKLVAIY*SQNLVISLMNG
Trigger: ACCATTCATTAGCGAAATAACCAAATTTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp CAGTTTGTTTCTTTTACCTCATCAGTTGTTGTACAATaGACAGTTGCACTAGGGTCTCCTCTAGGTACTTTG +
Preference number: 3 (lower is better)
Translates to: QFVSFTSSVVVQ*TVALGSPLGTL
Trigger: CAAAGTACCTAGAGGAGACCCTAGTGCAACTGTGCATTGTACAACAACTGATGAGGTAAAAGAAACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp ACTGAGTGTATGGTATTAGAGACGAAAAGCTGTCCATaGGGGACCAATATGACCACCAACATTGTTATACAA +
Preference number: 3 (lower is better)
Translates to: TECMVLETKSCP*GTNMTTNIVIQ
Trigger: TTGTATAACAATGTTGGTGGTCATATTGGTCCCCCATGGACAGCTTTTCGTCTCTAATACCATACACTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAATACTAAGGAAGCCTTaGAGATTATGCCAGTCGCGG +
Preference number: 3 (lower is better)
Translates to: ELWVILVKSHVVLPQLALILRKP*RLCQSR
Trigger: CCGCGACTGGCATAATCTCAAAGGCTTCCTTAGTAT...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACACAATTTTACCATGATTaGGTTCCTCACGGTTTCTTA +
Preference number: 3 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTQFYHD*VPHGFL
Trigger: TAAGAAACCGTGAGGAACCAAATCATGGTAAAATTG...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp AGGAGACTCAGAAGACTTCTCCTAGTCTACAATTTCTaGCTCTATAATCCTTGCCTTAGAACAACAACCAAG +
Preference number: 3 (lower is better)
Translates to: RRLRRLLLVYNF*LYNPCLRTTTK
Trigger: CTTGGTTGTTGTTCTAAGGCAAGGATTATAGAGTCAGAAATTGTAGACTAGGAGAAGTCTTCTGAGTCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp TTACTGCTCACAAAATTTGGTTATTTCGCTAATGAATaGTTGTTAGCTAACAACCAAGGCCACACTCACCCA +
Preference number: 3 (lower is better)
Translates to: LLLTKFGYFANE*LLANNQGHTHP
Trigger: TGGGTGAGTGTGGCCTTGGTTGTTAGCTAACAACCATTCATTAGCGAAATAACCAAATTTTGTGAGCAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTaGCCACTCTGTAATGAGCACCTCCTACAGAAACAA +
Preference number: 3 (lower is better)
Translates to: LFHNQVHSSVGI*PLCNEHLLQKQ
Trigger: TTGTTTCTGTAGGAGGTGCTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CCA 72 bp AAATACACCGGGAATCCAACATTTCCCTCACTTAAATaGAGAACGCTCCAAGATTTAGTCATTCCTGATGAT +
Preference number: 3 (lower is better)
Translates to: KYTGNPTFPSLK*RTLQDLVIPDD
Trigger: ATCATCAGGAATGACTAAATCTTGGAGCGTTCTCCATTTAAGTGAGGGAAATGTTGGATTCCCGGTGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp TATGAAGATTACCCTAGACTTAGCACTTATCCCAACTaGAATCATGTGGTCATTTGCCCAGTTATCTTTTTG +
Preference number: 3 (lower is better)
Translates to: YEDYPRLSTYPN*NHVVICPVIFL
Trigger: CAAAAAGATAACTGGGCAAATGACCACATGATTGCAGTTGGGATAAGTGCTAAGTCTAGGGTAATCTTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTACTAGTTTCAAACATATaGCATGTACTATGTGCCAGC +
Preference number: 3 (lower is better)
Translates to: ELWVILVKSHVVLPQLALLVSNI*HVLCAS
Trigger: GCTGGCACATAGTACATGCAATATGTTTGAAACTAG...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR-3UTR CAA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTTTAGTGGCACTTATTTaGAAAAGCACATGGCTTACC +
Preference number: 3 (lower is better)
Translates to: LWVILVKSHVVLPQLALVLVALI*KSTWLT
Trigger: GGTAAGCCATGTGCTTTTCAAAATAAGTGCCACTAA...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR TCA 72 bp ACATCAGCAGATTCTGTTACTATTAGTTACCAGGAATaGGACTTGCACTTGCGGATTCAAAATCAAATTGAG +
Preference number: 3 (lower is better)
Translates to: TSADSVTISYQE*DLHLRIQNQIE
Trigger: CTCAATTTGATTTTGAATCCGCAAGTGCAAGTCTCATTCCTGGTAACTAATAGTAACAGAATCTGCTGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR GCA 72 bp TCCTTAACTAGTTTCAAACATATTGCATGTACTATGTaGCAGCCACTATCTGCTTGCTTTATATTCCCTATC +
Preference number: 3 (lower is better)
Translates to: SLTSFKHIACTM*QPLSACFIFPI
Trigger: GATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATATGTTTGAAACTAGTTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
3UTR GCA 72 bp CAGATTCTGTTACTATTAGTTACCAGGAATGAGACTTaGACTTGCGGATTCAAAATCAAATTGAGTTGTAGG +
Preference number: 3 (lower is better)
Translates to: QILLLLVTRNET*TCGFKIKLSCR
Trigger: CCTACAACTCAATTTGATTTTGAATCCGCAAGTGCAAGTCTCATTCCTGGTAACTAATAGTAACAGAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GCACTGGGGGTATCCACGACCCCCAGTGGTCACCACTGCACCCACGTGCAACTAAGGCGGAGGCTGCAGTaGGCCGAGATCGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: ALGVSTTPSGHHCTHVQLRRRLQ*AEIAPP
Trigger: CGGTGGCGCGATCTCGGCTCACTGCAGCCTCCGCCT...TAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR TCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCATTGGCAGACAGCTCCTaGGGTCTGAGCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: YRGPGPVHECTGQPRTPALADSS*GLSNPL
Trigger: CAGAGGGTTGCTCAGACCTCAGGAGCTGTCTGCCAA...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp GCACTGGGGGTATCCACGACCCCCAGTGGTCACCACTGCACCCACGTGCAACTACCCAGTGGTCACCACTaGACCCACGTGCAACTAGAG +
Preference number: 4 (lower is better)
Translates to: ALGVSTTPSGHHCTHVQLPSGHH*THVQLE
Trigger: CTCTAGTTGCACGTGGGTGCAGTGGTGACCACTGGG...TAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR CCA 90 bp TCAATACCCCAGCAGTCCTTCGATTTGCAGGCACTGGGGGTATCCACGACCCCCCAGGGACTGGCTGAGTaGCTGGAAGGTGCGACGGCT +
Preference number: 4 (lower is better)
Translates to: SIPQQSFDLQALGVSTTPQGLAE*LEGATA
Trigger: AGCCGTCGCACCTTCCAGCCACTCAGCCAGTCCCTG...GGGGGTCGTGGATACCCCCAGTGCCTGCAAATCGAAGGACTGCTGGGGTATTGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR TCA 90 bp GCACTGGGGGTATCCACGACCCCCAGTGGTCACCACTGCACCCACGTGCAACTACAGCACACTGTCTGCTaGAGTGCGATACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALGVSTTPSGHHCTHVQLQHTVC*SAIPGF
Trigger: GAAGCCAGGTATCGCACTTCAGCAGACAGTGTGCTG...TAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR TCA 90 bp TCAATACCCCAGCAGTCCTTCGATTTGCAGGCACTGGGGGTATCCACGACCCCCAGGGAAGCGCCTTTCTaGGGGAGCCAAGCTTGCATC +
Preference number: 4 (lower is better)
Translates to: SIPQQSFDLQALGVSTTPREAPF*GSQACI
Trigger: GATGCAAGCTTGGCTCCCTCAGAAAGGCGCTTCCCT...GGGGGTCGTGGATACCCCCAGTGCCTGCAAATCGAAGGACTGCTGGGGTATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR GCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACCACCTGGAACCGTTGTaGCCACCGCCTACTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHHLEPL*PPPTPP
Trigger: TGGGGGAGTAGGCGGTGGGCACAACGGTTCCAGGTG...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TCAATACCCCAGCAGTCCTTCGATTTGCAGGCACTGGGGGTATCCACGACCCCCTCGATTTGCAGGCACTaGGGGTATCCACGACCCCCA +
Preference number: 4 (lower is better)
Translates to: SIPQQSFDLQALGVSTTPSICRH*GYPRPP
Trigger: TGGGGGTCGTGGATACCCCCAGTGCCTGCAAATCGA...GGGGGTCGTGGATACCCCCAGTGCCTGCAAATCGAAGGACTGCTGGGGTATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR TCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACCCCCCTCCTCACAACTaGGACCAGAGGACACAGAGG +
Preference number: 4 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHPPPHN*DQRTQR
Trigger: CCTCTGTGTCCTCTGGTCTCAGTTGTGAGGAGGGGG...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TCAATACCCCAGCAGTCCTTCGATTTGCAGGCACTGGGGGTATCCACGACCCCCAGCAGTCCTTCGATTTaGAGGCACTGGGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: SIPQQSFDLQALGVSTTPSSPSI*RHWGYP
Trigger: TGGATACCCCCAGTGCCTGCAAATCGAAGGACTGCT...GGGGGTCGTGGATACCCCCAGTGCCTGCAAATCGAAGGACTGCTGGGGTATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR CCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGCAGGGACTGGCTGAGTaGCTGGAAGGTGCGACGGCT +
Preference number: 4 (lower is better)
Translates to: CCLGVRATLGIERQGDAVQGLAE*LEGATA
Trigger: AGCCGTCGCACCTTCCAGCCACTCAGCCAGTCCCTG...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp CCGCAGTTCACAGACCAGTTCACAGACCGTGATGCCTaGCAGGCCATCTCAGAGGCCCCTGGTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PQFTDQFTDRDA*QAISEAPGSLS
Trigger: AGAAAGAGAACCAGGGGCCTCTGAGATGGCCTGCAAGGCATCACGGTCTGTGAACTGGTCTGTGAACTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAGGGAAGCGCCTTTCTaGGGGAGCCAAGCTTGCATC +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEREAPF*GSQACI
Trigger: GATGCAAGCTTGGCTCCCTCAGAAAGGCGCTTCCCT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
ENST00000503315.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR TCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAAAGCACTTTGATAAATaGGGTACATGGGGCACATGG +
Preference number: 4 (lower is better)
Translates to: YRGPGPVHECTGQPRTPAKHFDK*GTWGTW
Trigger: CCATGTGCCCCATGTACCTCATTTATCAAAGTGCTT...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACGTCTTCATGGCTACATaGGTCTCCCTGGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHVFMAT*VSLGCG
Trigger: ACCGCATCCCAGGGAGACTCATGTAGCCATGAAGAC...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TCAATACCCCAGCAGTCCTTCGATTTGCAGGCACTGGGGGTATCCACGACCCCCCTTTTTCCCTCACTTTaGCCAGCACTTCCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: SIPQQSFDLQALGVSTTPLFPSL*PALPPR
Trigger: TCTCGGAGGAAGTGCTGGCCAAAGTGAGGGAAAAAG...GGGGGTCGTGGATACCCCCAGTGCCTGCAAATCGAAGGACTGCTGGGGTATTGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR CCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAACCATACCAACTCTGTaGGCCACATTGTTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: YRGPGPVHECTGQPRTPATIPTL*ATLFRV
Trigger: GACTCTAAACAATGTGGCCCACAGAGTTGGTATGGT...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GCACTGGGGGTATCCACGACCCCCAGTGGTCACCACTGCACCCACGTGCAACTATTTGCCATCTCATTCTaGTTCAGAGCTAATGCCACA +
Preference number: 4 (lower is better)
Translates to: ALGVSTTPSGHHCTHVQLFAISF*FRANAT
Trigger: TGTGGCATTAGCTCTGAATCAGAATGAGATGGCAAA...TAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR TCA 90 bp GAGGAAACTGAGGATGCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGCCTCAGGTGGGATTGTaGTCTCAGACCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: EETEDAQGHTVMGALSILPQVGL*SQTWIQ
Trigger: CTGAATCCAGGTCTGAGATCACAATCCCACCTGAGG...CAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGCATCCTCAGTTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGGTCCTTTCTTCCTCCTaGGCTCTGGTCTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEVLSSS*ALVSVR
Trigger: CCTGACAGAGACCAGAGCTCAGGAGGAAGAAAGGAC...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGGGCGTTGTGCCTGGGTaGTACCCTGCCTCCCTATGC +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQGVVPG*YPASLC
Trigger: GCATAGGGAGGCAGGGTATCACCCAGGCACAACGCC...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp GAGGAAACTGAGGATGCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGATTCGAGGGCCGAAATaGAGCAGCCATACTGTCTCG +
Preference number: 4 (lower is better)
Translates to: EETEDAQGHTVMGALSILIRGPK*SSHTVS
Trigger: CGAGACAGTATGGCTGCTGCATTTCGGCCCTCGAAT...CAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGCATCCTCAGTTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp GAGGAAACTGAGGATGCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTGTGCGACTCTCATATaGGGATCCTGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: EETEDAQGHTVMGALSILCATLI*GSCPQV
Trigger: CACCTGAGGACAGGATCCGCATATGAGAGTCGCACA...CAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGCATCCTCAGTTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCCTCAGGTGGGATTGTaGTCTCAGACCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEPQVGL*SQTWIQ
Trigger: CTGAATCCAGGTCTGAGATCACAATCCCACCTGAGG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGATTCGAGGGCCGAAATaGAGCAGCCATACTGTCTCG +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEIRGPK*SSHTVS
Trigger: CGAGACAGTATGGCTGCTGCATTTCGGCCCTCGAAT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR GCA 90 bp GAGGAAACTGAGGATGCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGAAGGATCCTCAGCCATaGAAAAGGGAAGCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: EETEDAQGHTVMGALSILKDPQP*KREAPF
Trigger: GAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTT...CAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGCATCCTCAGTTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCGACCTCAGCAGTGGGTaGTGGCATGACCCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: AQGHTVMGALSILFLKSCDLSSG*WHDPLK
Trigger: TTTTAGAGGGTCATGCCAGCACCCACTGCTGAGGTC...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCCCACGGATACATTACTaGAAGATACAGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AQGHTVMGALSILFLKSCPRIHY*KIQGPW
Trigger: CCAGGGCCCCTGTATCTTGCAGTAATGTATCCGTGG...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCTTAGGAGCTGTGGCTaGTCCACAGAGATGCTAGCT +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSELRSCG*STEMLA
Trigger: AGCTAGCATCTCTGTGGAGCAGCCACAGCTCCTAAG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR CCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCGACTGGCTGAGTGGCTaGAAGGTGCGACGGCTGACC +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATDWLSG*KVRRLT
Trigger: GGTCAGCCGTCGCACCTTCCAGCCACTCAGCCAGTC...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCAGTCTGCAGCAATCTTaGCAGACAGCTCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AQGHTVMGALSILFLKSCSLQQS*QTAPEV
Trigger: GACCTCAGGAGCTGTCTGCCAAGATTGCTGCAGACT...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAAGGAGAGACCGGATATaGAGAAAAAGATCTGTAACA +
Preference number: 4 (lower is better)
Translates to: YRGPGPVHECTGQPRTPARRDRI*RKRSVT
Trigger: TGTTACAGATCTTTTTCTCCATATCCGGTCTCTCCT...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp GGAGGAGGAAGGGATACACAGTGGGCTGAGCAAAACTaGGAGTCAGGTCTAAATGTGGAAGGTTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GGGRDTQWAEQN*ESGLNVEGWDW
Trigger: CCAGTCCCAACCTTCCACATTTAGACCTGACTCCAAGTTTTGCTCAGCCCACTGTGTATCCCTTCCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGACTCCCCCTTCAAGATaGGCTTGTTCTGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSETPPSR*ACSGSV
Trigger: AACTGACCCAGAACAAGCTCATCTTGAAGGGGGAGT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
ENST00000503315.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR TCA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAAGTCATAGACATATATaGTGGCAGAGCAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: YRGPGPVHECTGQPRTPASHRHI*WQSNEK
Trigger: TTTCTCATTGCTCTGCCATCATATATGTCTATGACT...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GAGGAAACTGAGGATGCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTCTTCTGCTCACTGGTaGCCAGACACGGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: EETEDAQGHTVMGALSILSSAHW*PDTVKF
Trigger: GAATTTTACCGTGTCTGGTCACCAGTGAGCAGAAGA...CAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGCATCCTCAGTTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAAGGCAGGAGAATCGCTTaGACCCGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLAELRLHKTSASKLCRKGRRIA*TREAEA
Trigger: AGCCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCC...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR TCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACTTTTGGAGGTGGCAATaGAGAGTCTGCAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHFWRWQ*RVCSNL
Trigger: AAGATTGCTGCAGACTCTTCATTGCCACCTCCAAAA...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGAGGCCAAGCGGGGAGGTaGGCAGTTCAGCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRGQAGR*AVQQRF
Trigger: AAAGCGCTGCTGAACTGCTCACCTCCCCGCTTGGCC...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGACTCCTCACCCTACCTaGCATCAACCCAGTAATTTG +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSETPHPT*HQPSNL
Trigger: CAAATTACTGGGTTGATGTCAGGTAGGGTGAGGAGT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGTTGGCCAGGGATTATTaGGAATACATGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSELARDY*EYMHTA
Trigger: GGCTGTGTGCATGTATTCTCAATAATCCCTGGCCAA...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGTCACTGTGTATCTTCTaGTCACTGGTGACCAGACAC +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSESLCIF*SLVTRH
Trigger: GTGTCTGGTCACCAGTGAGCAGAAGATACACAGTGA...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCAGAGCAGCCAGCTCTaGAGTGTTTCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATQSSQL*SVSAAG
Trigger: CCCTGCAGCTGAAACACTGCAGAGCTGGCTGCTCTG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAGAGTTGGAGCTGGATaGACAAATGTGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSERVGAG*TNVGQI
Trigger: AATCTGGCCCACATTTGTCCATCCAGCTCCAACTCT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATACGAAAAGCTGTCCATaGGGGACCAATATGACCACC +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHTKSCP*GTNMTT
Trigger: GGTGGTCATATTGGTCCCCCATGGACAGCTTTTCGT...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCAAGACACCAGCATTTaGTGTCTAGTGAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEQDTSI*CLVRAH
Trigger: ATGGGCTCTCACTAGACACCAAATGCTGGTGTCTTG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATGGAAGGGATACACAGTaGGCTGAGCAAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHGRDTQ*AEQNLE
Trigger: CTCCAAGTTTTGCTCAGCCCACTGTGTATCCCTTCC...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp CACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGCATCAGACCATGCTGGCCAGGCTaGTCTAGAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: HLGRQYRDKVKNMTSSIRPCWPG*SRTPDL
Trigger: GAGGTCAGGGGTTCTAGACCAGCCTGGCCAGCATGG...TCTGATGCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATACTCAATTGGTTCACTaGTTAACCGCCCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHTQLVH*LTAQLS
Trigger: GGAGAGCTGGGCGGTTAACCAGTGAACCAATTGAGT...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp CCCCCGCACAGGCAAGTCATTCTACTTGTCTGTGTCTaGGCTCTGTCATGTGTAAAACCGGGACAGAAACAG +
Preference number: 4 (lower is better)
Translates to: PPHRQVILLVCV*ALSCVKPGQKQ
Trigger: CTGTTTCTGTCCCGGTTTTACACATGACAGAGCCAAGACACAGACAAGTAGAATGACTTGCCTGTGCGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp CTACTGACAGCAAAGCAGGAAGTTGGCCAGGGATTATaGAGAATACATGCACACAGCCAGCACTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLTAKQEVGQGL*RIHAHSQHLGR
Trigger: CCTGCCCAAGTGCTGGCTGTGTGCATGTATTCTCAATAATCCCTGGCCAACTTCCTGCTTTGCTGTCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGGCCCAGTTATCTTTTTaGTGTCTGTTGCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEAQLSF*CLLLLQ
Trigger: CTGCAAGAGCAACAGACATCAAAAAGATAACTGGGC...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACTTCTCTTTCTTCTCCTaGTTAAATGAGGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHFSFFS*LNEAFL
Trigger: GAGGAAGGCCTCATTTAATCAGGAGAAGAAAGAGAA...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAACTCCAGGCCAGTGAGTaGCTTAGGAGCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLAELRLHKTSASKLCRKLQASE*LRSCGC
Trigger: GCAGCCACAGCTCCTAAGTCACTCACTGGCCTGGAG...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR TCA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAACGGGAGGGATGTTCCTaGAGACGAACGTCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LLAELRLHKTSASKLCRKREGCS*RRTSPH
Trigger: ATGGGGCGACGTTCGTCTTCAGGAACATCCCTCCCG...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR GCA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCACTTTGCAGGGGTTATaGCTTCCTTCATGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: AQGHTVMGALSILFLKSCTLQGL*LPSCCQ
Trigger: TTGACAGCATGAAGGAAGGCATAACCCCTGCAAAGT...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCGACTGGCTGAGTGGCTaGAAGGTGCGACGGCTGACC +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLDWLSG*KVRRLT
Trigger: GGTCAGCCGTCGCACCTTCCAGCCACTCAGCCAGTC...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATCAGGGACTGGCTGAGTaGCTGGAAGGTGCGACGGCT +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHQGLAE*LEGATA
Trigger: AGCCGTCGCACCTTCCAGCCACTCAGCCAGTCCCTG...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATAAGGAGCAAGTGAGGTaGGGTCACTGTGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHKEQVR*GHCVSS
Trigger: AGAAGATACACAGTGACCCCACCTCACTTGCTCCTT...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGCTCAGCAGTGGGTGCTaGCATGACCCTCTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLLSSGC*HDPLKG
Trigger: GCCTTTTAGAGGGTCATGCCAGCACCCACTGCTGAG...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGGTGTATCACAGGCTGTaGAATGAAAGGGGTATAGGA +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEVYHRL*NERGIG
Trigger: TCCTATACCCCTTTCATTCCACAGCCTGTGATACAC...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAAATCCACGACCCCCAGTaGTCACCACTGCACCCACGT +
Preference number: 4 (lower is better)
Translates to: LLAELRLHKTSASKLCRKIHDPQ*SPLHPR
Trigger: ACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGAT...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGTACTTGCAAAGCACCTaGTCTTTCATGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEYLQST*SFMSST
Trigger: AGTGGAGCTCATGAAAGACCAGGTGCTTTGCAAGTA...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543322.5
3UTR CAA 72 bp CTTCATGCTACTGATTATTTACTTGCAAAGTGGGCGTaGTGCCTGGGTGATACCCTGCCTCCCTATGCAGTG +
Preference number: 4 (lower is better)
Translates to: LHATDYLLAKWA*CLGDTLPPYAV
Trigger: CACTGCATAGGGAGGCAGGGTATCACCCAGGCACAACGCCCACTTTGCAAGTAAATAATCAGTAGCATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCTTTGCCATCTCATTCTaGTTCAGAGCTAATGCCACA +
Preference number: 4 (lower is better)
Translates to: AQGHTVMGALSILFLKSCFAISF*FRANAT
Trigger: TGTGGCATTAGCTCTGAATCAGAATGAGATGGCAAA...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp CACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGCATCAGACAGCACACTGTCTGCTaGAGTGCGATACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HLGRQYRDKVKNMTSSIRQHTVC*SAIPGF
Trigger: GAAGCCAGGTATCGCACTTCAGCAGACAGTGTGCTG...TCTGATGCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCTCACAGGCTGTGGAATaGAAGGGGTATAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATSQAVE*KGYRSP
Trigger: TGGGCTCCTATACCCCTTTCATTCCACAGCCTGTGA...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCATTCGAGGGCCGAAATaGAGCAGCCATACTGTCTCG +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATIRGPK*SSHTVS
Trigger: CGAGACAGTATGGCTGCTGCATTTCGGCCCTCGAAT...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAAGAAACCTCGTAAATaGTGGTCTTTCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEKKPRK*WSFMSS
Trigger: GGAGCTCATGAAAGACCAGCATTTACGAGGTTTCTT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
CDS-3UTR GCA 90 bp GAGGAAACTGAGGATGCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGCAGCCACTATCTGCTTaGTTTATATTCCCTATCTCA +
Preference number: 4 (lower is better)
Translates to: EETEDAQGHTVMGALSILQPLSA*FIFPIS
Trigger: TGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTG...CAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGCATCCTCAGTTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGACCAGGAATGAGACTTaGACTTGCGGATTCAAAATC +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSETRNET*TCGFKI
Trigger: GATTTTGAATCCGCAAGTGCAAGTCTCATTCCTGGT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGTACCCTGCCTCCCTATaGAGTGCAGTAGAACACAGC +
Preference number: 4 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLYPASL*SAVEHS
Trigger: GCTGTGTTCTACTGCACTGCATAGGGAGGCAGGGTA...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGTGTCATGGTGGGTCCTaGAGAAGTGAGCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQCHGGS*RSELHA
Trigger: AGCATGAAGCTCACTTCTGCAGGACCCACCATGACA...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGTGGGCCTCTCTTGCATaGATCGTTTCCTTAACCTCC +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQWASLA*IVSLTS
Trigger: GGAGGTTAAGGAAACGATCCATGCAAGAGAGGCCCA...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308077.9
CDS-3UTR CCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACATTCAATTAATTCATTaGTGGGCTTGGGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHIQLIH*WAWGQQ
Trigger: TTGCTGACCCCAAGCCCACCAATGAATTAATTGAAT...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGGCTTTGCACAGGACCTaGCAAATGGTAAGTCTTATT +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEALHRT*QMVSLI
Trigger: AATAAGACTTACCATTTGCCAGGTCCTGTGCAAAGC...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp TTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTaGCTACCAGCTATAACCGGAACATACTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: FLGQSLMMHAAI*LPAITGTYSSP
Trigger: GGGTGAGGAGTATGTTCCGGTTATAGCTGGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATAGGGAAGCGCCTTTCTaGGGGAGCCAAGCTTGCATC +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHREAPF*GSQACI
Trigger: GATGCAAGCTTGGCTCCCTCAGAAAGGCGCTTCCCT...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATGAGCCATTTGAACTGTaGGAGTTGGAGAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHEPFEL*ELEKMK
Trigger: TTTCATCTTCTCCAACTCTCACAGTTCAAATGGCTC...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCGGCATGAGAATTGCTTaGACCCAGGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATGMRIA*TQEAEV
Trigger: AACTTCTGCCTCCTGGGTTCAAGCAATTCTCATGCC...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGCCCGTCTCAACCTCCTaGGTAGCTGAAATTACAGAT +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQPVSTS*VAEITD
Trigger: ATCTGTAATTTCAGCTACTCAGGAGGTTGAGACGGG...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATAAGAAACCTCGTAAATaGTGGTCTTTCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHKKPRK*WSFMSS
Trigger: GGAGCTCATGAAAGACCAGCATTTACGAGGTTTCTT...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp GAGGAAACTGAGGATGCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGGATTGGGAAGCTTGTTaGTATTTACTGCTCACAAAA +
Preference number: 4 (lower is better)
Translates to: EETEDAQGHTVMGALSILDWEAC*YLLLTK
Trigger: TTTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATC...CAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGCATCCTCAGTTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATCGCACATGGACACATTaGATGATACTTACATTGGTC +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHRTWTH*MILTLV
Trigger: GACCAATGTAAGTATCATGCAATGTGTCCATGTGCG...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATGCAAAGTGGGCGTTGTaGCTGGGTGATACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHAKWAL*LGDTLP
Trigger: AGGCAGGGTATCACCCAGGCACAACGCCCACTTTGC...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACAGTCATGTCTACACCTaGAAAGTGAAATGTGGAATT +
Preference number: 4 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHSHVYT*KVKCGI
Trigger: AATTCCACATTTCACTTTGCAGGTGTAGACATGACT...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTCCTGATGGTGCTTACTaGGTTCCACTCTGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: MWYSGKDTRLGIWILISAPDGAY*VPLWCR
Trigger: CCGACACCAGAGTGGAACCCAGTAAGCACCATCAGG...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CCA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGATGGGAACAGGTGGAATaGACCAGTTTTTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRWEQVE*TSFSSR
Trigger: CCGACTGGAAAAACTGGTCCATTCCACCTGTTCCCA...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCCTAATACCAACACCTTaGGGATTTGGAGTTCAACAT +
Preference number: 4 (lower is better)
Translates to: AQGHTVMGALSILFLKSCLIPTP*GFGVQH
Trigger: ATGTTGAACTCCAAATCCCCAAGGTGTTGGTATTAG...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATTCTGTCTTTTCCCTGTaGCATGTAGAGTCTTTCGTA +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHSVFSL*HVESFV
Trigger: TACGAAAGACTCTACATGCCACAGGGAAAAGACAGA...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAGAATGCAAGCTCCATaGGAACAGAGGACATTTAAA +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSERMQAP*EQRTFK
Trigger: TTTAAATGTCCTCTGTTCCCATGGAGCTTGCATTCT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGCCTTTATCCCTGAGCTaGTGTGGCCAAACCATACCA +
Preference number: 4 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLPLSLS*CGQTIP
Trigger: TGGTATGGTTTGGCCACACCAGCTCAGGGATAAAGG...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGAGTGGGCGTTGTGCCTaGGTGATACCCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNESGRCA*VIPCLP
Trigger: AGGGAGGCAGGGTATCACCCAGGCACAACGCCCACT...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCCAGCACACTGTCTGCTaGAGTGCGATACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLQHTVC*SAIPGF
Trigger: GAAGCCAGGTATCGCACTTCAGCAGACAGTGTGCTG...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGAGGGAAGCGCCTTTCTaGGGGAGCCAAGCTTGCATC +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKREAPF*GSQACI
Trigger: GATGCAAGCTTGGCTCCCTCAGAAAGGCGCTTCCCT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR TCA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGAACAAAAGGAGCAAGTaGGGTGGGGTCACTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLNKRSK*GGVTVY
Trigger: ATACACAGTGACCCCACCTCACTTGCTCCTTTTGTT...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGAGGATACACAGTGGGCTaGGCAAAACTTGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRGYTVG*AKLGVR
Trigger: CCTGACTCCAAGTTTTGCTCAGCCCACTGTGTATCC...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAAATTCGAGGGCCGAAATaGAGCAGCCATACTGTCTCG +
Preference number: 4 (lower is better)
Translates to: LLAELRLHKTSASKLCRKIRGPK*SSHTVS
Trigger: CGAGACAGTATGGCTGCTGCATTTCGGCCCTCGAAT...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR GCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGATGTGCGACTCTCATATaGGGATCCTGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRCATLI*GSCPQV
Trigger: CACCTGAGGACAGGATCCGCATATGAGAGTCGCACA...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATCAGCCACTATCTGCTTaGTTTATATTCCCTATCTCA +
Preference number: 4 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHQPLSA*FIFPIS
Trigger: TGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTG...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCTTGGGCTTAGCAATGTaGTGGTTGTCTTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATLGLAM*WLSLSH
Trigger: GTGGGACAAAGACAACCAGCACATTGCTAAGCCCAA...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGCCATTTAGTCCAGCTTaGTTGCCAACTCTTCTACTC +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQPFSPA*LPTLLL
Trigger: GAGTAGAAGAGTTGGCAAGCAAGCTGGACTAAATGG...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGACTAGACTAGGAATCTaGATTCTAATCTCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: DQVPSRILSHAKGKRLSETRLGI*ILISAL
Trigger: TAGAGCTGAGATTAGAATCCAGATTCCTAGTCTAGT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACAACTCACCCACAGCACTaGAGCCATTTGAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTTHPQH*SHLNCE
Trigger: CTCACAGTTCAAATGGCTCCAGTGCTGTGGGTGAGT...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATGTTTTTCCAGTCGGCTaGGCAGCAGGGATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHVFPVG*AAGIGK
Trigger: CTTCCCAATCCCTGCTGCCCAGCCGACTGGAAAAAC...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGGTTTCTGGGAACAGGTaGAATGGACCAGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQVSGNR*NGPVFP
Trigger: TGGAAAAACTGGTCCATTCCACCTGTTCCCAGAAAC...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGCTACATGAGTCTCCCTaGGATGCGGTAGAATACATC +
Preference number: 4 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLLHESP*DAVEYI
Trigger: GATGTATTCTACCGCATCCCAGGGAGACTCATGTAG...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCGGCTTAGCAATGTGCTaGTTGTCTTTGTCCCACACT +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATGLAMC*LSLSHT
Trigger: AGTGTGGGACAAAGACAACCAGCACATTGCTAAGCC...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp TTCCAGTCGGCTGGGCAGCAGGGATTGGGAAGCTTGTaGCTATTTACTGCTCACAAAATTTGGTTATTTCGC +
Preference number: 4 (lower is better)
Translates to: FQSAGQQGLGSL*LFTAHKIWLFR
Trigger: GCGAAATAACCAAATTTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGCCGACTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp ATGGACCAGTTTTTCCAGTCGGCTGGGCAGCAGGGATaGGGAAGCTTGTTGCTATTTACTGCTCACAAAATT +
Preference number: 4 (lower is better)
Translates to: MDQFFQSAGQQG*GSLLLFTAHKI
Trigger: AATTTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGCCGACTGGAAAAACTGGTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp AGCAAAATTGCACATGGCCCATTTAGTCCAGCTTGCTaGCCAACTCTTCTACTCAAAGACAGGGGGACCTAT +
Preference number: 4 (lower is better)
Translates to: SKIAHGPFSPAC*PTLLLKDRGTY
Trigger: ATAGGTCCCCCTGTCTTTGAGTAGAAGAGTTGGCAAGCAAGCTGGACTAAATGGGCCATGTGCAATTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTAGGGAAGCGCCTTTCTaGGGGAGCCAAGCTTGCATC +
Preference number: 4 (lower is better)
Translates to: LWVILVKSHVVLPQLALVREAPF*GSQACI
Trigger: GATGCAAGCTTGGCTCCCTCAGAAAGGCGCTTCCCT...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGCTCCTTTTTCCCCTCTaGAAAGAGATAATGTGGTAC +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQLLFPL*KEIMWY
Trigger: GTACCACATTATCTCTTTTCAGAGGGGAAAAAGGAG...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGGATTCAAAATCAAATTaGGTTGTAGGGCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: CCLGVRATLGIERQGDAVDSKSN*VVGQSL
Trigger: AAGTGACTGCCCTACAACTCAATTTGATTTTGAATC...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGATTAGTTACCAGGAATaGGACTTGCACTTGCGGATT +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQISYQE*DLHLRI
Trigger: AATCCGCAAGTGCAAGTCTCATTCCTGGTAACTAAT...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGGTCATAAAATGTAACTaGTTCTGCCTGGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQVIKCN*FCLVLL
Trigger: CAAGAGGACCAGGCAGAAGCAGTTACATTTTATGAC...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACAGATGTCTGTTGCTCTTaGAGAATGCAAGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTDVCCS*RMQAPW
Trigger: CCATGGAGCTTGCATTCTGCAAGAGCAACAGACATC...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGGGTCCAGTACATGAATaGACTGGCCAACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEGPVHE*TGQPRT
Trigger: GGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACC...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCCTGCAGTGTTTCAGCTaGAGGGCAGTGATTAGCAGG +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLLQCFS*RAVISR
Trigger: CCTGCTAATCACTGCCCTGCAGCTGAAACACTGCAG...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTGTAGGGCAGTCACTTTaGAGGGGTTATGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: MWYSGKDTRLGIWILISAVGQSL*RGYAFL
Trigger: AAGGAAGGCATAACCCCTGCAAAGTGACTGCCCTAC...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGTACAATGCACAGTTaGACTAGGGTCTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTCTMHS*TRVSSR
Trigger: CCTAGAGGAGACCCTAGTGCAACTGTGCATTGTACA...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTGCCTGGGTGATACCCTaGCTCCCTATGCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LWVILVKSHVVLPQLALVAWVIP*LPMQCS
Trigger: ACTGCACTGCATAGGGAGGCAGGGTATCACCCAGGC...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp CACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGCATCAGACCTCAGATCCATAGGTaGACTGAAACCAGGGTTACT +
Preference number: 4 (lower is better)
Translates to: HLGRQYRDKVKNMTSSIRPQIHR*TETRVT
Trigger: AGTAACCCTGGTTTCAGTCCACCTATGGATCTGAGG...TCTGATGCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCCTGATGGTGCTTACTaGGTTCCACTCTGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKPDGAY*VPLWCR
Trigger: CCGACACCAGAGTGGAACCCAGTAAGCACCATCAGG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGTGTGCTTCGAATGTCTaGGGGGAAACGCCCACGGAT +
Preference number: 4 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNECASNV*GETPTD
Trigger: ATCCGTGGGCGTTTCCCCCCAGACATTCGAAGCACA...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCAACTTGAAAGTCACCTaGAACCGTTGTGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLNLKVT*NRCAHR
Trigger: GCGGTGGGCACAACGGTTCCAGGTGACTTTCAAGTT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGACACACAGCCAGCACTTaGGCAGGCAATACAGAGATA +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRHTAST*AGNTEI
Trigger: TATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTG...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGAGGTGTTTGACCAAATaGCCATCAACCAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQRCLTK*PSTRCF
Trigger: AAAACACCTGGTTGATGGCCATTTGGTCAAACACCT...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACAAGAAAGACTGAGTTCTaGCCACTCAACTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTRKTEF*PLNSRL
Trigger: GAGTCTGGAGTTGAGTGGCCAGAACTCAGTCTTTCT...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp CAGGAAATTTGCTACTTGGGCTTAGCAATGTGCTGGTaGTCTTTGTCCCACACTCTGCATCTATCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: QEICYLGLAMCW*SLSHTLHLSRC
Trigger: ACACCTAGATAGATGCAGAGTGTGGGACAAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCACTCCCCCTTCAAGATaGGCTTGTTCTGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLTPPSR*ACSGSV
Trigger: AACTGACCCAGAACAAGCTCATCTTGAAGGGGGAGT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp CAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCACAAGGAACTCCCCCTTCAAGATaGGCTTGTTCTGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: QRICFSKWGCSMFHRAQGTPPSR*ACSGSV
Trigger: AACTGACCCAGAACAAGCTCATCTTGAAGGGGGAGT...TCCTTGTGCTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTAATGCTGGTCTTTCATaGGCTCCACTGCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: MWYSGKDTRLGIWILISANAGLS*APLQIP
Trigger: AGGAATCTGCAGTGGAGCTCATGAAAGACCAGCATT...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGACTGAACTCATCATACTaGTTTCTGGGACTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRLNSSY*FLGLWS
Trigger: GCTCCAGAGTCCCAGAAATCAGTATGATGAGTTCAG...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCGAAGAAAACAGACAGTaGCAGGCATATGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATEENRQ*QAYDKH
Trigger: GTGCTTATCATATGCCTGTCACTGTCTGTTTTCTTC...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCGTCAATTGTAACAGATaGTGTTGCTGTCTAGGGGTA +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATVNCNR*CCCLGV
Trigger: TACCCCTAGACAGCAACATCATCTGTTACAATTGAC...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATCTTCAGCTCTGCTACTaGCAGCAAAGCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHLQLCY*QQSRKL
Trigger: CAACTTCCTGCTTTGCTGTCAGTAGCAGAGCTGAAG...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGGCACCTGGTCTTTCATaGGCTCCACTGCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKAPGLS*APLQIP
Trigger: AGGAATCTGCAGTGGAGCTCATGAAAGACCAGGTGC...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543322.5
CDS-3UTR GCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGATTCGAGGGCCGAAATaGAGCAGCCATACTGTCTCG +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKIRGPK*SSHTVS
Trigger: CGAGACAGTATGGCTGCTGCATTTCGGCCCTCGAAT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR GCA 90 bp CAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCACAAGGAAAGGATCCTCAGCCATaGAAAAGGGAAGCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QRICFSKWGCSMFHRAQGKDPQP*KREAPF
Trigger: GAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTT...TCCTTGTGCTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCTGGGGCATGAGAATTaGTTGAACCCAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKLGHEN*LNPGGR
Trigger: TCTGCCTCCTGGGTTCAAGCAATTCTCATGCCCCAG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGGAGAAAACTGTGAAATaGCTAAAGTATATTGTGGCA +
Preference number: 4 (lower is better)
Translates to: CCLGVRATLGIERQGDAVEKTVK*LKYIVA
Trigger: TGCCACAATATACTTTAGGCATTTCACAGTTTTCTC...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGATCAAATGAGATAAAGTaGTTTGCACAGGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRSNEIK*FAQDLA
Trigger: TGCCAGGTCCTGTGCAAAGCACTTTATCTCATTTGA...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCTTTTTCCCTCACTTTaGCCAGCACTTCCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: YEGREFVSLNGAVQCFTELFPSL*PALPPR
Trigger: TCTCGGAGGAAGTGCTGGCCAAAGTGAGGGAAAAAG...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CCA 90 bp CACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGCATCAGACCCTGGGAGTCAACATaGCAGGCTAAAATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HLGRQYRDKVKNMTSSIRPWEST*QAKIFC
Trigger: ACAGAAAATTTTAGCCTGCCATGTTGACTCCCAGGG...TCTGATGCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCCTCTTCAGTCTTCATaGCTACATGAGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: YEGREFVSLNGAVQCFTEPLQSS*LHESPW
Trigger: CCAGGGAGACTCATGTAGCCATGAAGACTGAAGAGG...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TGGATTCAGCAAACACCTGAAGCTGTGACTCTCTTACTGGGACACAGTCTACAGTTTTCCTTCTCAATTTaGGAGGAAACCCTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: WIQQTPEAVTLLLGHSLQFSFSI*EETLSQ
Trigger: TTGGGAAAGGGTTTCCTCCCAAATTGAGAAGGAAAA...CTGTAGACTGTGTCCCAGTAAGAGAGTCACAGCTTCAGGTGTTTGCTGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATATCCCTGAGCTGGTGTaGCCAAACCATACCAACTCT +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHIPELV*PNHTNS
Trigger: AGAGTTGGTATGGTTTGGCCACACCAGCTCAGGGAT...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp AGGAATGAGACTTGCACTTGCGGATTCAAAATCAAATaGAGTTGTAGGGCAGTCACTTTGCAGGGGTTATGC +
Preference number: 4 (lower is better)
Translates to: RNETCTCGFKIK*SCRAVTLQGLC
Trigger: GCATAACCCCTGCAAAGTGACTGCCCTACAACTCAATTTGATTTTGAATCCGCAAGTGCAAGTCTCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp ATTTGCTACTTGGGCTTAGCAATGTGCTGGTTGTCTTaGTCCCACACTCTGCATCTATCTAGGTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: ICYLGLAMCWLS*SHTLHLSRCFA
Trigger: TGCAAAACACCTAGATAGATGCAGAGTGTGGGACAAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGACTCCCCCTTCAAGATaGGCTTGTTCTGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKTPPSR*ACSGSV
Trigger: AACTGACCCAGAACAAGCTCATCTTGAAGGGGGAGT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR TCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATTTGCCATCTCATTCTaGTTCAGAGCTAATGCCACA +
Preference number: 4 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTFAISF*FRANAT
Trigger: TGTGGCATTAGCTCTGAATCAGAATGAGATGGCAAA...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGAAGTTCAGCAGCGCTTTaGTCCTCTTTCATTAGCAAC +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRSSAAL*SSFISN
Trigger: GTTGCTAATGAAAGAGGATCAAAGCGCTGCTGAACT...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCGTGAGCATCTTGGCCTaGTTCAGTCAGGAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLVSILA*FSQEKG
Trigger: TCCTTTTTCCTGACTGAATCAGGCCAAGATGCTCAC...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCATGGACACATTGCATaGTACTTACATTGGTCTACT +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATHGHIA*YLHWST
Trigger: AGTAGACCAATGTAAGTATCATGCAATGTGTCCATG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATACTCCTAGAGGTGTTTaGCCAAATGGCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHTPRGV*PNGHQP
Trigger: TGGTTGATGGCCATTTGGTCAAACACCTCTAGGAGT...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGAAGGATCCTCAGCCATaGAAAAGGGAAGCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKKDPQP*KREAPF
Trigger: GAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR GCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGAAGCCTCATGATGCATaGAGCCATCTTGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEKPHDA*SHLATS
Trigger: GCTGGTAGCAAGATGGCTGCATGCATCATGAGGCTT...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCCCTCAGATCCATAGGTaGACTGAAACCAGGGTTACT +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLPQIHR*TETRVT
Trigger: AGTAACCCTGGTTTCAGTCCACCTATGGATCTGAGG...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CCA 90 bp CACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGCATCAGACTGAAGTGCGATACCTaGCTTCTTAGGAAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: HLGRQYRDKVKNMTSSIRLKCDT*LLRKGN
Trigger: ATTACCTTTCCTAAGAAGCCAGGTATCGCACTTCAG...TCTGATGCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp CTGCTCACAAAATTTGGTTATTTCGCTAATGAATGGTaGTTAGCTAACAACCAAGGCCACACTCACCCACAG +
Preference number: 4 (lower is better)
Translates to: LLTKFGYFANEW*LANNQGHTHPQ
Trigger: CTGTGGGTGAGTGTGGCCTTGGTTGTTAGCTAACAACCATTCATTAGCGAAATAACCAAATTTTGTGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp TTTTTCCAGTCGGCTGGGCAGCAGGGATTGGGAAGCTaGTTGCTATTTACTGCTCACAAAATTTGGTTATTT +
Preference number: 4 (lower is better)
Translates to: FFQSAGQQGLGS*LLFTAHKIWLF
Trigger: AAATAACCAAATTTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGCCGACTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp GGATTCAAAATCAAATTGAGTTGTAGGGCAGTCACTTaGCAGGGGTTATGCCTTCCTTCATGCTGTCAATTG +
Preference number: 4 (lower is better)
Translates to: GFKIKLSCRAVT*QGLCLPSCCQL
Trigger: CAATTGACAGCATGAAGGAAGGCATAACCCCTGCAAAGTGACTGCCCTACAACTCAATTTGATTTTGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGATTCAGACCCTGCACTaGGTGTATGGTATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: YEGREFVSLNGAVQCFTEIQTLH*VYGIRD
Trigger: GTCTCTAATACCATACACTCAGTGCAGGGTCTGAAT...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGAACACAAGTTAGACCTTaGATAATAGGCAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRTQVRP*IIGRTE
Trigger: TTCTGTTCTGCCTATTATTCAAGGTCTAACTTGTGT...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATTGTTCAGGTTTAAGATaGGAGCCTGTTCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHCSGLR*EPVQLS
Trigger: TGACAGCTGAACAGGCTCTCATCTTAAACCTGAACA...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTATACATGCCACAGGGTaGTATGAAGATTACCCTAGA +
Preference number: 4 (lower is better)
Translates to: MWYSGKDTRLGIWILISAIHATG*YEDYPR
Trigger: TCTAGGGTAATCTTCATATCACCCTGTGGCATGTAT...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp CAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCACAAGGACATGTAAAGAAAGACTaGGTTCTGGCCACTCAACTC +
Preference number: 4 (lower is better)
Translates to: QRICFSKWGCSMFHRAQGHVKKD*VLATQL
Trigger: GAGTTGAGTGGCCAGAACTCAGTCTTTCTTTACATG...TCCTTGTGCTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTAAACTTGAGCTACCTTaGCCAGCTGGTAAGTCTTAT +
Preference number: 4 (lower is better)
Translates to: MWYSGKDTRLGIWILISAKLELP*PAGKSY
Trigger: ATAAGACTTACCAGCTGGGCAAGGTAGCTCAAGTTT...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGAACTAGACTAGGAATCTaGATTCTAATCTCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRTRLGI*ILISAL
Trigger: TAGAGCTGAGATTAGAATCCAGATTCCTAGTCTAGT...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp CACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATGACCTCCAGCATCAGAAAAAATAAGCCAGTGTaGTGGCACACAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: HLGRQYRDKVKNMTSSIRKNKPV*WHTTVF
Trigger: GAATACAGTTGTGTGCCACCACACTGGCTTATTTTT...TCTGATGCTGGAGGTCATGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTCATCATACTGATTTCTaGGACTCTGGAGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: MWYSGKDTRLGIWILISAHHTDF*DSGATD
Trigger: ATCTGTTGCTCCAGAGTCCCAGAAATCAGTATGATG...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTACTGGATGGACAAATGTaGGCCAGATTAGGAAGGACC +
Preference number: 4 (lower is better)
Translates to: ELWVILVKSHVVLPQLALLDGQM*ARLGRT
Trigger: GGTCCTTCCTAATCTGGCCCACATTTGTCCATCCAG...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGACCTGACTCATATGTATaGAATCAGATATTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRPDSYV*NQIFWG
Trigger: CCCCCAGAATATCTGATTCCATACATATGAGTCAGG...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGAAATGACACAGACAACTaGTTTTACAAAACACCAGCA +
Preference number: 4 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRNDTDN*FYKTPA
Trigger: TGCTGGTGTTTTGTAAAACCAGTTGTCTGTGTCATT...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGACATAATAGTACTTTATaGGGTTTCCCAGGGATCAAA +
Preference number: 4 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRHNSTL*GFPGIK
Trigger: TTTGATCCCTGGGAAACCCCATAAAGTACTATTATG...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGCAGCATCAGACCTCCTaGGTTCAAATACTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEQHQTS*VQILCS
Trigger: AGAGCACAGTATTTGAACCCAGGAGGTCTGATGCTG...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp AACTGCAATCATGTGGTCATTTGCCCAGTTATCTTTTaGATGTCTGTTGCTCTTGCAGAATGCAAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: NCNHVVICPVIF*MSVALAECKLH
Trigger: ATGGAGCTTGCATTCTGCAAGAGCAACAGACATCAAAAAGATAACTGGGCAAATGACCACATGATTGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp ATCTGTCTCAGAACCTTTAAAATGGGGTCAGGAAATTaGCTACTTGGGCTTAGCAATGTGCTGGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ICLRTFKMGSGN*LLGLSNVLVVF
Trigger: AAAGACAACCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCATTTTAAAGGTTCTGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTAGCACTGGAGCCATTTaGACTGTGAGAGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LWVILVKSHVVLPQLALVSTGAI*TVRVGE
Trigger: TTCTCCAACTCTCACAGTTCAAATGGCTCCAGTGCT...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATAAGCCCCGTTTTTGTTaGATTCTGTATCACCTAAGG +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHKPRFC*ILYHLR
Trigger: CCTTAGGTGATACAGAATTCAACAAAAACGGGGCTT...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp CAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCACAAGGAATGAAGAAGTCATCTTaGACAAGGGCATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: QRICFSKWGCSMFHRAQGMKKSS*TRASVL
Trigger: AAGGACAGATGCCCTTGTTCAAGATGACTTCTTCAT...TCCTTGTGCTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGAAGAAACCTCGTAAATaGTGGTCTTTCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YEGREFVSLNGAVQCFTEKKPRK*WSFMSS
Trigger: GGAGCTCATGAAAGACCAGCATTTACGAGGTTTCTT...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATCTGTTTCTTAAGAGCTaGTCCTTTTTCCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHLFLKS*SFFPSE
Trigger: TTCAGAGGGGAAAAAGGAGCAGCTCTTAAGAAACAG...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCGTGCCAGCCACTATCTaGTTGCTTTATATTCCCTAT +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLVPATI*LLYIPY
Trigger: ATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCAC...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATGTGCCAGCCACTATCTaGTTGCTTTATATTCCCTAT +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHVPATI*LLYIPY
Trigger: ATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCAC...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACAGATGATGACTATAACTaGATGAGAACCCGAATAAGA +
Preference number: 4 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTDDDYN*MRTRIR
Trigger: TCTTATTCGGGTTCTCATGCAGTTATAGTCATCATC...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGTCAGTTGTTGTACAATaGACAGTTGCACTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: YEGREFVSLNGAVQCFTESVVVQ*TVALGS
Trigger: AGACCCTAGTGCAACTGTGCATTGTACAACAACTGA...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp CAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCACAAGGACTTTGTCCCACACTCTaGATCTATCTAGGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: QRICFSKWGCSMFHRAQGLCPTL*IYLGVL
Trigger: CAAAACACCTAGATAGATGCAGAGTGTGGGACAAAG...TCCTTGTGCTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGTGGGGTCAGGAAATTTaGTACTTGGGCTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEWGQEI*YLGLAM
Trigger: CATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCA...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATTTAGTCCAGCTTGCTTaGCAACTCTTCTACTCAAAG +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHLVQLA*QLFYSK
Trigger: CTTTGAGTAGAAGAGTTGGCAAGCAAGCTGGACTAA...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCTGAAGTGCGATACCTaGCTTCTTAGGAAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: YEGREFVSLNGAVQCFTELKCDT*LLRKGN
Trigger: ATTACCTTTCCTAAGAAGCCAGGTATCGCACTTCAG...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CCA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCATTTGTTTCTCTAAATaGGGCTGTTCAATGTTTCAC +
Preference number: 4 (lower is better)
Translates to: NDKLFRPKPHDACSHLATICFSK*GCSMFH
Trigger: GTGAAACATTGAACAGCCCCATTTAGAGAAACAAAT...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTACTGGGCAGCAGGGATTaGGAAGCTTGTTGCTATTTA +
Preference number: 4 (lower is better)
Translates to: ELWVILVKSHVVLPQLALLGSRD*EACCYL
Trigger: TAAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAG...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCACAGTTCTGAAGGCTaGGAAATCCAAGAACAAGAC +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKHSSEG*EIQEQD
Trigger: GTCTTGTTCTTGGATTTCCCAGCCTTCAGAACTGTG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCCCAACTGCAATCATGTaGTCATTTGCCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLPTAIM*SFAQLS
Trigger: AGATAACTGGGCAAATGACCACATGATTGCAGTTGG...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp CAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCACAAGGAACGTGTACACGCACATaGACACATTGCATGATACTT +
Preference number: 4 (lower is better)
Translates to: QRICFSKWGCSMFHRAQGTCTRT*THCMIL
Trigger: AAGTATCATGCAATGTGTCCATGTGCGTGTACACGT...TCCTTGTGCTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATCAGAACCTTTAAAATaGGGTCAGGAAATTTGCTAC +
Preference number: 4 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTSEPLK*GQEICY
Trigger: GTAGCAAATTTCCTGACCCCATTTTAAAGGTTCTGA...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGAACAATTAGGATTCTATaGGGGCAGAGAATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRTIRIL*GQRICF
Trigger: GAAACAAATTCTCTGCCCTCATAGAATCCTAATTGT...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTCATGGGGGACCAATATaGCCACCAACATTGTTATAC +
Preference number: 4 (lower is better)
Translates to: LWVILVKSHVVLPQLALVHGGPI*PPTLLY
Trigger: GTATAACAATGTTGGTGGTCATATTGGTCCCCCATG...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGACAGCAACCAGTTTATaGGAAAACTGTGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: YEGREFVSLNGAVQCFTETATSL*ENCEMP
Trigger: AGGCATTTCACAGTTTTCTCATAAACTGGTTGCTGT...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGTTCCCAGGGATCAAATaGGATAAAGTGCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKFPGIK*DKVLCT
Trigger: TGTGCAAAGCACTTTATCTCATTTGATCCCTGGGAA...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATCTATCGATGCCCATaGAGAAGTCATCTTGAACAA +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLIYRCP*RSHLEQ
Trigger: TTGTTCAAGATGACTTCTTCATGGGCATCGATAGAT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCCTTCTAACACCTGAATaGGATAAAAGCCTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLLLTPE*DKSLLN
Trigger: GTTAAGCAGGCTTTTATCTCATTCAGGTGTTAGAAG...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCTGTTTCTTAAGAGCTaGTCCTTTTTCCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKLFLKS*SFFPSE
Trigger: TTCAGAGGGGAAAAAGGAGCAGCTCTTAAGAAACAG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCTGAAGTGCGATACCTaGCTTCTTAGGAAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKLKCDT*LLRKGN
Trigger: ATTACCTTTCCTAAGAAGCCAGGTATCGCACTTCAG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCAAAGTCACTGAGTTTTaGAGTGTTTTCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLKVTEF*SVFHTA
Trigger: TGCTGTGTGGAAAACACTCCAAAACTCAGTGACTTT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTATTCCTACCACTGAGATaGGATATATGCTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: ELWVILVKSHVVLPQLALFLPLR*DICSLH
Trigger: ATGGAGGGAGCATATATCCCATCTCAGTGGTAGGAA...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAAAACAAAAAGATCCCTaGGAGTCAACATGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ELWVILVKSHVVLPQLALKQKDP*ESTWQA
Trigger: AGCCTGCCATGTTGACTCCCAGGGATCTTTTTGTTT...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCAGGCAAACAGTTAATTaGGGGGATTTTCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLRQTVN*GDFPSQ
Trigger: TTGAGAAGGAAAATCCCCCCAATTAACTGTTTGCCT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGATTTCCCTCACTTAAATaGAGAACGCTCCAAGATTTA +
Preference number: 4 (lower is better)
Translates to: LDSINSLVGLGSARENSRFPSLK*RTLQDL
Trigger: TAAATCTTGGAGCGTTCTCCATTTAAGTGAGGGAAA...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATTTTGGGCAAGACTCATaGCCCACTGAATTTGATATT +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHFGQDS*PTEFDI
Trigger: AATATCAAATTCAGTGGGCCATGAGTCTTGCCCAAA...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp CAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCACAAGGAAGAGAATTTCTCCTTTaGGTAGAGCTTCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: QRICFSKWGCSMFHRAQGREFLL*VELLLL
Trigger: TAAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCT...TCCTTGTGCTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR TCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCACAATTAGGATTCTATaGGGGCAGAGAATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLTIRIL*GQRICF
Trigger: GAAACAAATTCTCTGCCCTCATAGAATCCTAATTGT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR GCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGCTTTTTGATGTCTGTTaGTCTTGCAGAATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNELFDVC*SCRMQA
Trigger: AGCTTGCATTCTGCAAGAGCAACAGACATCAAAAAG...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGAAAGATTTATACTTTTaGGCAAGACTCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKKDLYF*ARLMAH
Trigger: GTGGGCCATGAGTCTTGCCCAAAAGTATAAATCTTT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp ATGACCTCGCTTAAAGGAAGGGGTGACCAAATTTCTTaGGGCTTGTTTTATAATGACACAAATCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: MTSLKGRGDQIS*GLFYNDTNPIH
Trigger: ATGAATGGGATTTGTGTCATTATAAAACAAGCCCAAAGAAATTTGGTCACCCCTTCCTTTAAGCGAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp TTAGTTCACTGCAAAGAAACAGAGAAGCCTACATTTTaGCCTACCCAAATTGTAGCAGGTAAATCCTTACCT +
Preference number: 4 (lower is better)
Translates to: LVHCKETEKPTF*PTQIVAGKSLP
Trigger: AGGTAAGGATTTACCTGCTACAATTTGGGTAGGCAAAAATGTAGGCTTCTCTGTTTCTTTGCAGTGAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGAGAGAATTTCTCCTTTaGGTAGAGCTTCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKREFLL*VELLLL
Trigger: TAAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR TCA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGAACCAGAACTATCCCTaGTATCACCTAATTAAGAAG +
Preference number: 4 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNENQNYP*YHLIKK
Trigger: CTTCTTAATTAGGTGATATCAGGGATAGTTCTGGTT...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGGAATCAATTTTACCATaGTTTGGTTCCTCACGGTTT +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKESILP*FGSSRF
Trigger: AAACCGTGAGGAACCAAATCATGGTAAAATTGATTC...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATAATGAGATAAAAGCCTaGTTAACACAGCATGTAAAG +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHNEIKA*LTQHVK
Trigger: CTTTACATGCTGTGTTAAGCAGGCTTTTATCTCATT...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR GCA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGATCTCTATCAATACTTaGAAAGCACCTGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKISINT*KAPGLS
Trigger: TGAAAGACCAGGTGCTTTGCAAGTATTGATAGAGAT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543322.5
CDS-3UTR CCA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATTTGTTTCTCTAAATaGGGCTGTTCAATGTTTCAC +
Preference number: 4 (lower is better)
Translates to: YCMYYVPATICLLYIPYLICFSK*GCSMFH
Trigger: GTGAAACATTGAACAGCCCCATTTAGAGAAACAAAT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CCA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATTCTAGGTACTTTGGGTaGTTTTCAAGAATGTATCTA +
Preference number: 4 (lower is better)
Translates to: LHVLCASHYLLALYSLSHSRYFG*FSRMYL
Trigger: TAGATACATTCTTGAAAACCACCCAAAGTACCTAGA...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAAGAGAATTTCTCCTTTaGGTAGAGCTTCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ELWVILVKSHVVLPQLALREFLL*VELLLL
Trigger: TAAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCT...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR TCA 90 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTACTAGTCTACAATTTCTaGCTCTATAATCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ELWVILVKSHVVLPQLALLVYNF*LYNPCL
Trigger: AAGGCAAGGATTATAGAGTCAGAAATTGTAGACTAG...TAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
3UTR CAA 72 bp GAATTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTaGCCACAATTGGCCTTAGTTTGTATGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: ELWVILVKSHVV*PQLALVCMDFF
Trigger: AAAGAAATCCATACAAACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAACTTTTTCCCTCACTTaGGCCAGCACTTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: YRGPGPVHECTGQPRTPATFSLT*ASTSSE
Trigger: CTCGGAGGAAGTGCTGGCCAAAGTGAGGGAAAAAGT...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCAGCTGGGCAGCAGGGATaGGGAAGCTTGTTGCTATTT +
Preference number: 5 (lower is better)
Translates to: YRGPGPVHECTGQPRTPAAGQQG*GSLLLF
Trigger: AAATAGCAACAAGCTTCCCAATCCCTGCTGCCCAGC...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GAGGAAACTGAGGATGCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGACAGACCGTGATGCCTaGCAGGCCATCTCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: EETEDAQGHTVMGALSILTDRDA*QAISEA
Trigger: GGCCTCTGAGATGGCCTGCAAGGCATCACGGTCTGT...CAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGCATCCTCAGTTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGTGTATTCCCAGCTACTaGGGAGGCTGGGGCATGAGA +
Preference number: 5 (lower is better)
Translates to: DQVPSRILSHAKGKRLSECIPSY*GGWGMR
Trigger: TCTCATGCCCCAGCCTCCCAAGTAGCTGGGAATACA...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGGCACACAGCCAGCACTaGGGCAGGCAATACAGAGAT +
Preference number: 5 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEAHSQH*GRQYRD
Trigger: ATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGC...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGCTTGCAAAGTGGGCGTaGTGCCTGGGTGATACCCTG +
Preference number: 5 (lower is better)
Translates to: CCLGVRATLGIERQGDAVLAKWA*CLGDTL
Trigger: CAGGGTATCACCCAGGCACAACGCCCACTTTGCAAG...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TACAGGGGCCCTGGTCCAGTACATGAATGCACTGGCCAACCCAGGACCCCCGCACTAGTTTCAAACATATaGCATGTACTATGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: YRGPGPVHECTGQPRTPALVSNI*HVLCAS
Trigger: GCTGGCACATAGTACATGCAATATGTTTGAAACTAG...TGCGGGGGTCCTGGGTTGGCCAGTGCATTCATGTACTGGACCAGGGCCCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATCCCAGAGCCACTCAATaGGTTCACTGGTTAACCGCC +
Preference number: 5 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHPRATQ*VHWLTA
Trigger: GGCGGTTAACCAGTGAACCAATTGAGTGGCTCTGGG...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GCACTGGGGGTATCCACGACCCCCAGTGGTCACCACTGCACCCACGTGCAACTAAGTAGTCATTTAAATTaGGCTTACTCAGCAGTCCTA +
Preference number: 5 (lower is better)
Translates to: ALGVSTTPSGHHCTHVQLSSHLN*AYSAVL
Trigger: TAGGACTGCTGAGTAAGCCAAATTTAAATGACTACT...TAGTTGCACGTGGGTGCAGTGGTGACCACTGGGGGTCGTGGATACCCCCAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR CAA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACGTTGGCCAGGGATTATaGAGAATACATGCACACAGC +
Preference number: 5 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHVGQGL*RIHAHS
Trigger: GCTGTGTGCATGTATTCTCAATAATCCCTGGCCAAC...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGGCCCAGCTCTCCACTTaGTCATGGTGGGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLAQLST*SWWVLQ
Trigger: CTGCAGGACCCACCATGACAAAGTGGAGAGCTGGGC...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACCCCTTCAAGATGAGCTaGTTCTGGGTCAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHPFKMS*FWVSFF
Trigger: AAAGAAACTGACCCAGAACAAGCTCATCTTGAAGGG...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCAGGCAGGCAGATCACTaGAGGATAAGAGTTAGAGAC +
Preference number: 5 (lower is better)
Translates to: AQGHTVMGALSILFLKSCRQADH*RIRVRD
Trigger: GTCTCTAACTCTTATCCTCAAGTGATCTGCCTGCCT...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCTTAGCAATGTGCTGGTaGTCTTTGTCCCACACTCTG +
Preference number: 5 (lower is better)
Translates to: AQGHTVMGALSILFLKSCLAMCW*SLSHTL
Trigger: CAGAGTGTGGGACAAAGACAACCAGCACATTGCTAA...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCCCTTCAAGATGAGCTaGTTCTGGGTCAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEPFKMS*FWVSFF
Trigger: AAAGAAACTGACCCAGAACAAGCTCATCTTGAAGGG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308077.9
ENST00000380639.10
ENST00000486995.5
ENST00000503315.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGAAGTATGAAGCAGCTTaGAACTGCTCTCATGGCACA +
Preference number: 5 (lower is better)
Translates to: DQVPSRILSHAKGKRLSEKYEAA*NCSHGT
Trigger: TGTGCCATGAGAGCAGTTCAAAGCTGCTTCATACTT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380639.10
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CAA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATATACTAAGGAAGCCTTaGAGATTATGCCAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHILRKP*RLCQSR
Trigger: CCGCGACTGGCATAATCTCAAAGGCTTCCTTAGTAT...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTATGTGTAGGGCAGATGGTAGAGACTACAGACCTCAGCAGTGGGTGCTGGCATCAGGAAATTTGCTACTaGGGCTTAGCAATGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LCVGQMVETTDLSSGCWHQEICY*GLAMCW
Trigger: CCAGCACATTGCTAAGCCCAAGTAGCAAATTTCCTG...ATGCCAGCACCCACTGCTGAGGTCTGTAGTCTCTACCATCTGCCCTACACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTGTCTGTCTTTTCCCTGTGGCATGTAGAGTCTTTCGTAGTGCCTTGTCCTTTGTTCTGCCTGGTCCTCTaGGGACAGTCACTCCTAGTA +
Preference number: 5 (lower is better)
Translates to: LSVFSLWHVESFVVPCPLFCLVL*GQSLLV
Trigger: TACTAGGAGTGACTGTCCCAAGAGGACCAGGCAGAA...CAAAGGACAAGGCACTACGAAAGACTCTACATGCCACAGGGAAAAGACAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCGTCTTTCGTAGTGCCTaGTCCTTTGTAGATTCTCAA +
Preference number: 5 (lower is better)
Translates to: AQGHTVMGALSILFLKSCVFRSA*SFVDSQ
Trigger: TTGAGAATCTACAAAGGACAAGGCACTACGAAAGAC...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACGTAGTTTTGCCACAATaGGCCTTAGTTTGTATGGAT +
Preference number: 5 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHVVLPQ*ALVCMD
Trigger: ATCCATACAAACTAAGGCCAATTGTGGCAAAACTAC...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GCCCAGGGCCACACAGTAATGGGGGCCCTTAGTATTCTGTTTCTTAAGAGCTGCATTTTCCTTCTCAATTaGGGAGGAAACCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: AQGHTVMGALSILFLKSCIFLLN*GGNPFP
Trigger: TGGGAAAGGGTTTCCTCCCAAATTGAGAAGGAAAAT...GCAGCTCTTAAGAAACAGAATACTAAGGGCCCCCATTACTGTGTGGCCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGTTACCTCATCAGTTGTaGTACAATGCACAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: DQVPSRILSHAKGKRLSELPHQL*YNAQLH
Trigger: GTGCAACTGTGCATTGTACAACAACTGATGAGGTAA...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGACTCTGTGGGCCACATaGTTTAGAGTCATTAACAGT +
Preference number: 5 (lower is better)
Translates to: DQVPSRILSHAKGKRLSETLWAT*FRVINS
Trigger: ACTGTTAATGACTCTAAACAATGTGGCCCACAGAGT...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGCTAGTTTCAAACATATaGCATGTACTATGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: DQVPSRILSHAKGKRLSELVSNI*HVLCAS
Trigger: GCTGGCACATAGTACATGCAATATGTTTGAAACTAG...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CAA 90 bp TCCCCTACCATGCTAGGCACCCAGCAAACAGAGCAGAAAGGACAGACATGGCACAGTAGTCATTTAAATTaGGCTTACTCAGCAGTCCTA +
Preference number: 5 (lower is better)
Translates to: SPTMLGTQQTEQKGQTWHSSHLN*AYSAVL
Trigger: TAGGACTGCTGAGTAAGCCAAATTTAAATGACTACT...GTGCCATGTCTGTCCTTTCTGCTCTGTTTGCTGGGTGCCTAGCATGGTAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp GACCAGGTTCCTTCAAGGATCCTCAGCCATGCAAAAGGGAAGCGCCTTTCTGAGTTAGTGGCACTTATTTaGAAAAGCACATGGCTTACC +
Preference number: 5 (lower is better)
Translates to: DQVPSRILSHAKGKRLSELVALI*KSTWLT
Trigger: GGTAAGCCATGTGCTTTTCAAAATAAGTGCCACTAA...CTCAGAAAGGCGCTTCCCTTTTGCATGGCTGAGGATCCTTGAAGGAACCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CAA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTAGTCACCTGGAACCGTaGTGCCCACCGCCTACTCCC +
Preference number: 5 (lower is better)
Translates to: LWVILVKSHVVLPQLALVSHLEP*CPPPTP
Trigger: GGGAGTAGGCGGTGGGCACAACGGTTCCAGGTGACT...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAAACTTTTTCCCTCACTTaGGCCAGCACTTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: LLAELRLHKTSASKLCRKTFSLT*ASTSSE
Trigger: CTCGGAGGAAGTGCTGGCCAAAGTGAGGGAAAAAGT...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR CAA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCAGGGATTGGGAAGCTaGTTGCTATTTACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: NDKLFRPKPHDACSHLATQGLGS*LLFTAH
Trigger: GTGAGCAGTAAATAGCAACAAGCTTCCCAATCCCTG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTCTGCCTCTGAGGCCCTaGGAAGAAAGTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LWVILVKSHVVLPQLALVLPLRP*EESQLG
Trigger: GCCCAGCTGACTTTCTTCCAAGGGCCTCAGAGGCAG...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTGGGCTACTTTGGGGATaGAAAGACAGGGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: MWYSGKDTRLGIWILISAGLLWG*KDRVML
Trigger: CAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCC...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGATGTAGGGCAGTCACTTaGCAGGGGTTATGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LDSINSLVGLGSARENSRCRAVT*QGLCLP
Trigger: AGGAAGGCATAACCCCTGCAAAGTGACTGCCCTACA...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TGCTGTCTAGGGGTAAGGGCTACTTTGGGGATTGAAAGACAGGGTGATGCTGTGCTTTTACCTCATCAGTaGTTGTACAATGCACAGTTG +
Preference number: 5 (lower is better)
Translates to: CCLGVRATLGIERQGDAVLLPHQ*LYNAQL
Trigger: CAACTGTGCATTGTACAACAACTGATGAGGTAAAAG...CACAGCATCACCCTGTCTTTCAATCCCCAAAGTAGCCCTTACCCCTAGACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGAGTTGGGACAGAGATCTaGTCTGTCTTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LDSINSLVGLGSARENSRVGTEI*SVFSLW
Trigger: CCACAGGGAAAAGACAGACAAGATCTCTGTCCCAAC...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCGAACAGACAGCAAAATaGCACATGGCCCATTTAGTC +
Preference number: 5 (lower is better)
Translates to: NDKLFRPKPHDACSHLATEQTAK*HMAHLV
Trigger: GACTAAATGGGCCATGTGCAATTTTGCTGTCTGTTC...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCGGATTGGGAAGCTTGTaGCTATTTACTGCTCACAAA +
Preference number: 5 (lower is better)
Translates to: NDKLFRPKPHDACSHLATGLGSL*LFTAHK
Trigger: TTTGTGAGCAGTAAATAGCAACAAGCTTCCCAATCC...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTGGCAAGTCATTCTACTaGTCTGTGTCTTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: MWYSGKDTRLGIWILISAGKSFY*SVSWLC
Trigger: ACAGAGCCAAGACACAGACAAGTAGAATGACTTGCC...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATGCATGCAGCCATCTaGCTACCAGCTATAACCGGA +
Preference number: 5 (lower is better)
Translates to: YCMYYVPATICLLYIPYLMHAAI*LPAITG
Trigger: TCCGGTTATAGCTGGTAGCAAGATGGCTGCATGCAT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGATGCATGATACTTACATaGGTCTACTTTCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRCMILT*VYFLQR
Trigger: CCTCTGCAGAAAGTAGACCAATGTAAGTATCATGCA...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGCAGCACTGGAGCCATTaGAACTGTGAGAGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEQHWSH*NCESWR
Trigger: TCTCCAACTCTCACAGTTCAAATGGCTCCAGTGCTG...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATTCGCTAATGAATGGTaGTTAGCTAACAACCAAGGC +
Preference number: 5 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTFANEW*LANNQG
Trigger: GCCTTGGTTGTTAGCTAACAACCATTCATTAGCGAA...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATTCTAAATGTGGAAGGTaGGGACTGGCTGTCTTAGTC +
Preference number: 5 (lower is better)
Translates to: LHVLCASHYLLALYSLSHSKCGR*GLAVLV
Trigger: GACTAAGACAGCCAGTCCCAACCTTCCACATTTAGA...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TACATGCACACAGCCAGCACTTGGGCAGGCAATACAGAGATAAGGTTAAAAACATCTTTCATTAGCAACTaGAAAGTCACCTGGAACCGT +
Preference number: 5 (lower is better)
Translates to: YMHTASTWAGNTEIRLKTSFISN*KVTWNR
Trigger: ACGGTTCCAGGTGACTTTCAAGTTGCTAATGAAAGA...TGTTTTTAACCTTATCTCTGTATTGCCTGCCCAAGTGCTGGCTGTGTGCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp ATGTGGTACAGTGGGAAGGATACTAGACTAGGAATCTGGATTCTAATCTCAGCTCTACTGATTATTTACTaGCAAAGTGGGCGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: MWYSGKDTRLGIWILISALLIIY*QSGRCA
Trigger: GGCACAACGCCCACTTTGCAAGTAAATAATCAGTAG...AGCTGAGATTAGAATCCAGATTCCTAGTCTAGTATCCTTCCCACTGTACCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGATGTGCTGGTTGTCTTaGTCCCACACTCTGCATCTA +
Preference number: 5 (lower is better)
Translates to: YEGREFVSLNGAVQCFTEMCWLS*SHTLHL
Trigger: TAGATGCAGAGTGTGGGACAAAGACAACCAGCACAT...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGAATGGGGTCAGGAAATTaGCTACTTGGGCTTAGCAAT +
Preference number: 5 (lower is better)
Translates to: LDSINSLVGLGSARENSRMGSGN*LLGLSN
Trigger: ATTGCTAAGCCCAAGTAGCAAATTTCCTGACCCCAT...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCCCTTCAAGATGAGCTaGTTCTGGGTCAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: YEGREFVSLNGAVQCFTEPFKMS*FWVSFF
Trigger: AAAGAAACTGACCCAGAACAAGCTCATCTTGAAGGG...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CAA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGAAGTATGAAGCAGCTTaGAACTGCTCTCATGGCACA +
Preference number: 5 (lower is better)
Translates to: YEGREFVSLNGAVQCFTEKYEAA*NCSHGT
Trigger: TGTGCCATGAGAGCAGTTCAAAGCTGCTTCATACTT...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TCTGAAGGCTGGGAAATCCAAGAACAAGACACCAGCATTTGGTGTCTAGTGAGACATATGATAAGCACTTaGATAAATGAGGTACATGGG +
Preference number: 5 (lower is better)
Translates to: SEGWEIQEQDTSIWCLVRHMIST*INEVHG
Trigger: CCCATGTACCTCATTTATCAAAGTGCTTATCATATG...TCTCACTAGACACCAAATGCTGGTGTCTTGTTCTTGGATTTCCCAGCCTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGTGGGCTGAGCAAAACTaGGAGTCAGGTCTAAATGTG +
Preference number: 5 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEWAEQN*ESGLNV
Trigger: CACATTTAGACCTGACTCCAAGTTTTGCTCAGCCCA...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCGATTCAATTAATTCATaGGTGGGCTTGGGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: YCMYYVPATICLLYIPYLDSINS*VGLGSA
Trigger: TGCTGACCCCAAGCCCACCAATGAATTAATTGAATC...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp AATGACAAGCTTTTTAGGCCAAAGCCTCATGATGCATGCAGCCATCTTGCTACCCAATTTTACCATGATTaGGTTCCTCACGGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: NDKLFRPKPHDACSHLATQFYHD*VPHGFL
Trigger: TAAGAAACCGTGAGGAACCAAATCATGGTAAAATTG...GGTAGCAAGATGGCTGCATGCATCATGAGGCTTTGGCCTAAAAAGCTTGTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp CTTGATTCAATTAATTCATTGGTGGGCTTGGGGTCAGCAAGAGAGAATAGCAGATGCCCAGTTATCTTTTaGATGTCTGTTGCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: LDSINSLVGLGSARENSRCPVIF*MSVALA
Trigger: TGCAAGAGCAACAGACATCAAAAAGATAACTGGGCA...TCTGCTATTCTCTCTTGCTGACCCCAAGCCCACCAATGAATTAATTGAATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCATGAAGAAGTCATCTaGAACAAGGGCATCTGTCCT +
Preference number: 5 (lower is better)
Translates to: YEGREFVSLNGAVQCFTEHEEVI*NKGICP
Trigger: AGGACAGATGCCCTTGTTCAAGATGACTTCTTCATG...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGCCCTTCAAGATGAGCTaGTTCTGGGTCAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKPFKMS*FWVSFF
Trigger: AAAGAAACTGACCCAGAACAAGCTCATCTTGAAGGG...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CAA 90 bp TTGTTAGCAGAACTGAGACTCCATAAGACCTCTGCTTCCAAACTCTGCAGAAAAAAATGGACACAGCTTTaGCCATCTCATTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: LLAELRLHKTSASKLCRKKWTQL*PSHSDS
Trigger: TGAATCAGAATGAGATGGCAAAAGCTGTGTCCATTT...TTTTCTGCAGAGTTTGGAAGCAGAGGTCTTATGGAGTCTCAGTTCTGCTAACAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000486995.5
CDS-3UTR CAA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGAAGTATGAAGCAGCTTaGAACTGCTCTCATGGCACA +
Preference number: 5 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKKYEAA*NCSHGT
Trigger: TGTGCCATGAGAGCAGTTCAAAGCTGCTTCATACTT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380639.10
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CAA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATGAGAGAATTTCTCCTTaGAGTAGAGCTTCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LHVLCASHYLLALYSLSHERISP*SRASSL
Trigger: AAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCTC...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CAA 90 bp TATTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCAAATGGACACAGCTTTaGCCATCTCATTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: YCMYYVPATICLLYIPYLKWTQL*PSHSDS
Trigger: TGAATCAGAATGAGATGGCAAAAGCTGTGTCCATTT...GAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308077.9
ENST00000380639.10
CDS-3UTR CAA 90 bp TATGAGGGCAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGTTAGTGGCACTTATTTaGAAAAGCACATGGCTTACC +
Preference number: 5 (lower is better)
Translates to: YEGREFVSLNGAVQCFTELVALI*KSTWLT
Trigger: GGTAAGCCATGTGCTTTTCAAAATAAGTGCCACTAA...CTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTGCCCTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTGCATGTACTATGTGCCAGCCACTATCTGCTTGCTTTATATTCCCTATCTCATCTAAAATTTTCTGTGTaGGGACAGAGATCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LHVLCASHYLLALYSLSHLKFSV*GQRSCL
Trigger: CAGACAAGATCTCTGTCCCAACACAGAAAATTTTAG...ATGAGATAGGGAATATAAAGCAAGCAGATAGTGGCTGGCACATAGTACATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp CAGAGAATTTGTTTCTCTAAATGGGGCTGTTCAATGTTTCACAGAGCACAAGGAGGATTCAAAATCAAATaGAGTTGTAGGGCAGTCACT +
Preference number: 5 (lower is better)
Translates to: QRICFSKWGCSMFHRAQGGFKIK*SCRAVT
Trigger: AGTGACTGCCCTACAACTCAATTTGATTTTGAATCC...TCCTTGTGCTCTGTGAAACATTGAACAGCCCCATTTAGAGAAACAAATTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGTTTAGTCCAGCTTGCTaGCCAACTCTTCTACTCAAA +
Preference number: 5 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEFSPAC*PTLLLK
Trigger: TTTGAGTAGAAGAGTTGGCAAGCAAGCTGGACTAAA...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGAAATGGACACAGCTTTaGCCATCTCATTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEKWTQL*PSHSDS
Trigger: TGAATCAGAATGAGATGGCAAAAGCTGTGTCCATTT...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGAAATGGACACAGCTTTaGCCATCTCATTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKKWTQL*PSHSDS
Trigger: TGAATCAGAATGAGATGGCAAAAGCTGTGTCCATTT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CAA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGTTAGTGGCACTTATTTaGAAAAGCACATGGCTTACC +
Preference number: 5 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKLVALI*KSTWLT
Trigger: GGTAAGCCATGTGCTTTTCAAAATAAGTGCCACTAA...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CAA 90 bp TTATTTCACAACCAAGTCCATTCTTCAGTAGGAATTTGGCCACTCTGTAATGAGAAGTCTCATGTAGTTTaGCCACAATTGGCCTTAGTT +
Preference number: 5 (lower is better)
Translates to: LFHNQVHSSVGIWPLCNEKSHVV*PQLALV
Trigger: AACTAAGGCCAATTGTGGCAAAACTACATGAGACTT...CTCATTACAGAGTGGCCAAATTCCTACTGAAGAATGGACTTGGTTGTGAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp TTGTGGGTTATTTTAGTCAAGTCTCATGTAGTTTTGCCACAATTGGCCTTAGTTTCTCCTCTAGGTACTTaGGGTGGTTTTCAAGAATGT +
Preference number: 5 (lower is better)
Translates to: LWVILVKSHVVLPQLALVSPLGT*GGFQEC
Trigger: ACATTCTTGAAAACCACCCAAAGTACCTAGAGGAGA...AACTAAGGCCAATTGTGGCAAAACTACATGAGACTTGACTAAAATAACCCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS-3UTR CAA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGAGTAGTCATTTAAATTaGGCTTACTCAGCAGTCCTA +
Preference number: 5 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKSSHLN*AYSAVL
Trigger: TAGGACTGCTGAGTAAGCCAAATTTAAATGACTACT...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380639.10
ENST00000486995.5
ENST00000503868.5
ENST00000536805.5
ENST00000543322.5
CDS-3UTR CAA 90 bp ACCCATGAACAAAGCAGTAGTCATTTAAATTTGGCTTACTCAGCAGTCCTAAAGTGCTACATAAGCACCTaGGGGTCATATAAAACAAAT +
Preference number: 5 (lower is better)
Translates to: THEQSSSHLNLAYSAVLKCYIST*GSYKTN
Trigger: ATTTGTTTTATATGACCCCAAGGTGCTTATGTAGCA...CTTTAGGACTGCTGAGTAAGCCAAATTTAAATGACTACTGCTTTGTTCATGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380639.10
CDS CAA 72 bp AAATGGAGAAAAGAATGGTACTTCTCTTGCTGGGTGTaGTCTCCGAGAGGGCAGCGGCAGCTGACAGAGCCG +
Preference number: 6 (lower is better)
Translates to: KWRKEWYFSCWV*SPRGQRQLTEP
Trigger: CGGCTCTGTCAGCTGCCGCTGCCCTCTCGGAGACAACACCCAGCAAGAGAAGTACCATTCTTTTCTCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493283.5