RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTAR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000188647

Ensembl transcript IDs: ENST00000340434.5, ENST00000377200.9, ENST00000415701.6, ENST00000467511.1, ENST00000472967.2, ENST00000474925.2

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCACTGTTTCCCTTTGGACGCAGGTTTCAGGCTAATCTATTTGTaGACACACCATCCTCTAAATGGGATGCCTCCAACCCCCAAAACG +
Preference number: 1 (lower is better)
Translates to: CHCFPLDAGFRLIYL*THHPLNGMPPTPKT
Trigger: CGTTTTGGGGGTTGGAGGCATCCCATTTAGAGGATGGTGTGTGCACAAATAGATTAGCCTGAAACCTGCGTCCAAAGGGAAACAGTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 90 bp AATACTGACAGTGGTCACCTCAGTCAGCAGCCAGCATCGAAGTCATaGATCAAGAACCTCGCCAGGAGGCAATGCCTAATTACATTTGTA +
Preference number: 1 (lower is better)
Translates to: NTDSGHLSQQPASKS*IKNLARRQCLITFV
Trigger: TACAAATGTAATTAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTGACTGAGGTGACCACTGTCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CCA 90 bp CGCAGGTTTCAGGCTAATCTATTTGTGCACACACCATCCTCTAAATaGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGA +
Preference number: 1 (lower is better)
Translates to: RRFQANLFVHTPSSK*DASNPQNVSCQKER
Trigger: TCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAGAGGATGGTGTGTGCACAAATAGATTAGCCTGAAACCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR TCA 90 bp AATGGAATAATCAAAGCATCCTGCCTGCTTATATCAGTCTCTCACTaGAGGATAAAATACCCTACGGGGCCATGCCTAGCGATGGGAATA +
Preference number: 1 (lower is better)
Translates to: NGIIKASCLLISVSH*RIKYPTGPCLAMGI
Trigger: TATTCCCATCGCTAGGCATGGCCCCGTAGGGTATTTTATCCTTCAGTGAGAGACTGATATAAGCAGGCAGGATGCTTTGATTATTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 90 bp AGGATTCATTTAGGACAACGTTCTGGCCTTTATTTTAGGGCAGAGTaGCACTGTTTCCCTTTGGACGCAGGTTTCAGGCTAATCTATTTG +
Preference number: 1 (lower is better)
Translates to: RIHLGQRSGLYFRAE*HCFPLDAGFRLIYL
Trigger: CAAATAGATTAGCCTGAAACCTGCGTCCAAAGGGAAACAGTGGCACTCTGCCCTAAAATAAAGGCCAGAACGTTGTCCTAAATGAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 90 bp GAACCTAAACCCGATAGTACTGGATATACCAATACAGAGACTGATTaGAGAAGACTACAGCAGTTCTCTCTAGAGTTCAGCCAGCTGCTT +
Preference number: 1 (lower is better)
Translates to: EPKPDSTGYTNTETD*RRLQQFSLEFSQLL
Trigger: AAGCAGCTGGCTGAACTCTAGAGAGAACTGCTGTAGTCTTCTGCAATCAGTCTCTGTATTGGTATATCCAGTACTATCGGGTTTAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 90 bp GGCATCAAAGCATTCTTTAGAAGGCTCAGCAACCACTATGGATACTaGCAGGAAATCATTCCAAACACTCTCATTTTGAAAAAGGCAGCA +
Preference number: 1 (lower is better)
Translates to: GIKAFFRRLSNHYGY*QEIIPNTLILKKAA
Trigger: TGCTGCCTTTTTCAAAATGAGAGTGTTTGGAATGATTTCCTGGCAGTATCCATAGTGGTTGCTGAGCCTTCTAAAGAATGCTTTGATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR CCA 90 bp TGTGGCCCAACAAGAATAAACTGGCATGACCTGAACATACCTAAGTaGCATACGATCTACTATGTATTTGCTTTCCTGCAAACTACTGCA +
Preference number: 1 (lower is better)
Translates to: CGPTRINWHDLNIPK*HTIYYVFAFLQTTA
Trigger: TGCAGTAGTTTGCAGGAAAGCAAATACATAGTAGATCGTATGCCACTTAGGTATGTTCAGGTCATGCCAGTTTATTCTTGTTGGGCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR TCA 90 bp CATTCCATTATTTTCCTAAAAACAACATATGCCAAAGTACAATACTaGCAGTGGTCACCTCAGTCAGCAGCCAGCATCGAAGTCATGCAT +
Preference number: 1 (lower is better)
Translates to: HSIIFLKTTYAKVQY*QWSPQSAASIEVMH
Trigger: ATGCATGACTTCGATGCTGGCTGCTGACTGAGGTGACCACTGTCAGTATTGTACTTTGGCATATGTTGTTTTTAGGAAAATAATGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 90 bp AGAGAAAGCAAGTACTGTTTTCCCCCTTTCAACTATATTACATTATaGCTGAATTTGAGAGGGAAGGAAGGTCCTAAAGTAAGGCAAAGG +
Preference number: 1 (lower is better)
Translates to: RESKYCFPPFNYITL*LNLRGKEGPKVRQR
Trigger: CCTTTGCCTTACTTTAGGACCTTCCTTCCCTCTCAAATTCAGGCATAATGTAATATAGTTGAAAGGGGGAAAACAGTACTTGCTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 90 bp ATCAAAGAATTTCTTCAGATGATTAAAAGCAGTTTCGGCTCTGTATaGAGGATCTGTCCTCTAGTATCACAAATGAACAGAAAGTGGTGT +
Preference number: 1 (lower is better)
Translates to: IKEFLQMIKSSFGSV*RICPLVSQMNRKWC
Trigger: ACACCACTTTCTGTTCATTTGTGATACTAGAGGACAGATCCTGCATACAGAGCCGAAACTGCTTTTAATCATCTGAAGAAATTCTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CCA 90 bp AAGGAAACAAGACATATTAAAGGACTGTGCGGCTTCAGAAAAGAGTaGGTTAAGAGCCTTAGAAGATATGAAAATAGTTTACACACCAAA +
Preference number: 1 (lower is better)
Translates to: KETRHIKGLCGFRKE*VKSLRRYENSLHTK
Trigger: TTTGGTGTGTAAACTATTTTCATATCTTCTAAGGCTCTTAACCCACTCTTTTCTGAAGCCGCACAGTCCTTTAATATGTCTTGTTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 90 bp CCCAAGTATTACGAAACTAGAAAGCATCATTCATTCCCAATCCATTaGACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACT +
Preference number: 1 (lower is better)
Translates to: PKYYETRKHHSFPIH*TNPSISQSSLILNT
Trigger: AGTGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGAATGAATGATGCTTTCTAGTTTCGTAATACTTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAGTAGAAATCGGGTCTTaGTATGTGGCCCAGGTTGGT +
Preference number: 2 (lower is better)
Translates to: QQPASKSCIKNLARRQCLVEIGS*YVAQVG
Trigger: ACCAACCTGGGCCACATAGCAAGACCCGATTTCTAC...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAGTTTCCTCTCCCACCTaGGATCCACAACTGATTCAT +
Preference number: 2 (lower is better)
Translates to: QQPASKSCIKNLARRQCLVSSPT*DPQLIH
Trigger: ATGAATCAGTTGTGGATCTCAGGTGGGAGAGGAAAC...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 90 bp GAGTGCCACTGTTTCCCTTTGGACGCAGGTTTCAGGCTAATCTATTaGTGCACACACCATCCTCTAAATGGGATGCCTCCAACCCCCAAA +
Preference number: 2 (lower is better)
Translates to: ECHCFPLDAGFRLIY*CTHHPLNGMPPTPK
Trigger: TTTGGGGGTTGGAGGCATCCCATTTAGAGGATGGTGTGTGCACAAATAGATTAGCCTGAAACCTGCGTCCAAAGGGAAACAGTGGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAGGCTTCAGAAAAGAGTaGGTTAAGAGCCTTAGAAGA +
Preference number: 2 (lower is better)
Translates to: QQPASKSCIKNLARRQCLGFRKE*VKSLRR
Trigger: TCTTCTAAGGCTCTTAACCCACTCTTTTCTGAAGCC...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTACAGCAAGATAAACAATaGGGCAGTCACAGAATATCT +
Preference number: 2 (lower is better)
Translates to: QQPASKSCIKNLARRQCLQQDKQ*GSHRIS
Trigger: AGATATTCTGTGACTGCCTCATTGTTTATCTTGCTG...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAGTTAATTTGGGCAAATaGGCACTTGTGTTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: QQPASKSCIKNLARRQCLVNLGK*ALVFGF
Trigger: GAAACCAAACACAAGTGCTCATTTGCCCAAATTAAC...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 90 bp CAACGTTCTGGCCTTTATTTTAGGGCAGAGTGCCACTGTTTCCCTTaGGACGCAGGTTTCAGGCTAATCTATTTGTGCACACACCATCCT +
Preference number: 2 (lower is better)
Translates to: QRSGLYFRAECHCFP*DAGFRLIYLCTHHP
Trigger: AGGATGGTGTGTGCACAAATAGATTAGCCTGAAACCTGCGTCCAAAGGGAAACAGTGGCACTCTGCCCTAAAATAAAGGCCAGAACGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAAGGCTAATCTATTTGTaGACACACCATCCTCTAAAT +
Preference number: 2 (lower is better)
Translates to: QQPASKSCIKNLARRQCLRLIYL*THHPLN
Trigger: ATTTAGAGGATGGTGTGTGCACAAATAGATTAGCCT...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp GTTTCCATAAATGTGATCCACAAGAACTGGGACATGTTCCAAACTGCACTGTGTGTGGCAGGTGTGTTTTaGGGCCAGCAGTGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: VSINVIHKNWDMFQTALCVAGVF*GQQCFV
Trigger: AACAAAACACTGCTGGCCTCAAAACACACCTGCCAC...ACACAGTGCAGTTTGGAACATGTCCCAGTTCTTGTGGATCACATTTATGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR-3UTR GCA 90 bp GTTTCCATAAATGTGATCCACAAGAACTGGGACATGTTCCAAACTGCACTGTGTAGGTCGTCTCTTACTTaGACTAAGGCTCCCATTCTC +
Preference number: 2 (lower is better)
Translates to: VSINVIHKNWDMFQTALCRSSLT*TKAPIL
Trigger: GAGAATGGGAGCCTTAGTGCAAGTAAGAGACGACCT...ACACAGTGCAGTTTGGAACATGTCCCAGTTCTTGTGGATCACATTTATGGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR-3UTR GCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAACAGTAGGTGGTATCTaGCATCTTGTGCTATGTAAG +
Preference number: 2 (lower is better)
Translates to: LNGMPPTPKTLVARKKELTVGGI*HLVLCK
Trigger: CTTACATAGCACAAGATGGCAGATACCACCTACTGT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTAACAGCCACAAACACCTaGGGCTCAAGCAATCCTTCT +
Preference number: 2 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLTATNT*GSSNPS
Trigger: AGAAGGATTGCTTGAGCCCCAGGTGTTTGTGGCTGT...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAATCAGGAAAACCAAATaGGAAGCCCCACATATAGAA +
Preference number: 2 (lower is better)
Translates to: LNGMPPTPKTLVARKKELIRKTK*EAPHIE
Trigger: TTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGAT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATTTTAGTGGAATGGGCTaGACCACCCATGTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYFSGMG*TTHVFS
Trigger: AGAGAAGACATGGGTGGTTCAGCCCATTCCACTAAA...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGTACCCTACGGGGCCATaGCTAGCGATGGGAATAAAT +
Preference number: 2 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKYPTGP*LAMGIN
Trigger: ATTTATTCCCATCGCTAGGCATGGCCCCGTAGGGTA...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAACATACATGTGTGTGTaGCCCAACAAGAATAAACTG +
Preference number: 2 (lower is better)
Translates to: LNGMPPTPKTLVARKKELTYMCV*PNKNKL
Trigger: CAGTTTATTCTTGTTGGGCCACACACACATGTATGT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTAGTTTCGGCTCTGTATaGAGGATCTGTCCTCTAGTA +
Preference number: 2 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCSFGSV*RICPLV
Trigger: TACTAGAGGACAGATCCTGCATACAGAGCCGAAACT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp GTGCTTCATATTCACCAATCATTTGTCCAATATATTTTTGGTGAGGAACACAGATCCACATCTCACCACTaGATCCTCAACTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VLHIHQSFVQYIFGEEHRSTSHH*ILNSFW
Trigger: CCAGAAGGAGTTGAGGATGCAGTGGTGAGATGTGGA...TCTGTGTTCCTCACCAAAAATATATTGGACAAATGATTGGTGAATATGAAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR-3UTR CCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTATACTATTCCTTCCCTTaGCATTTGCCAGTAAACTTT +
Preference number: 2 (lower is better)
Translates to: LNGMPPTPKTLVARKKELYYSFP*HLPVNF
Trigger: AAAGTTTACTGGCAAATGCCAAGGGAAGGAATAGTA...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 90 bp GGGGAGGCAGCAACACATAAAGTGCTAGGGTTTGCACAGTTCTATTaGAGAAATTTATTCAAGACAAAAGGTTCAGTTGTTATCAGGTTC +
Preference number: 2 (lower is better)
Translates to: GEAATHKVLGFAQFY*RNLFKTKGSVVIRF
Trigger: GAACCTGATAACAACTGAACCTTTTGTCTTGAATAAATTTCTCAAATAGAACTGTGCAAACCCTAGCACTTTATGTGTTGCTGCCTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGAGAGGTGTGTGTGTGTaGACCAATCAGGAAAACCAA +
Preference number: 2 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKRGVCV*TNQENQ
Trigger: TTGGTTTTCCTGATTGGTTCACACACACACACCTCT...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTATTGAAGACACACCCCTaGAGTAAGAAAGGAAAGGTA +
Preference number: 2 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLLKTHP*SKKGKV
Trigger: TACCTTTCCTTTCTTACTTCAGGGGTGTGTCTTCAA...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATTACCAATACAGAGACTaGTTGCAGAAGACTACAGCA +
Preference number: 2 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYYQYRD*LQKTTA
Trigger: TGCTGTAGTCTTCTGCAATCAGTCTCTGTATTGGTA...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp CTATTCACATCATACAGTAACAAAATCCACATCTCACCACTGCATCCTCAACTCAAACTGCCAAGCCAATaGACATTCAATCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: LFTSYSNKIHISPLHPQLKLPSQ*TFNLGF
Trigger: GAAACCAAGATTGAATGTTCATTGGCTTGGCAGTTT...GAGTTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR-3UTR GCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATTCATTAACTTCTCAGTaGCTCCACACATCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYSLTSQ*LHTSLH
Trigger: ATGGAGAGATGTGTGGAGGCACTGAGAAGTTAATGA...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTCATATTTTAGTGGAATaGGCTGAACCACCCATGTCT +
Preference number: 2 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCHILVE*AEPPMS
Trigger: AGACATGGGTGGTTCAGCCCATTCCACTAAAATATG...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATGGCTTCAGAAAAGAGTaGGTTAAGAGCCTTAGAAGA +
Preference number: 2 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYGFRKE*VKSLRR
Trigger: TCTTCTAAGGCTCTTAACCCACTCTTTTCTGAAGCC...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATTTGGTACCTCATCCCTaGTTAAGTTCAGTATCAAAG +
Preference number: 2 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYLVPHP*LSSVSK
Trigger: CTTTGATACTGAACTTAATCAGGGATGAGGTACCAA...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTAATAAGAAATATGACTaGAAGTCTGGGCCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCNKKYD*KSGPRV
Trigger: AACTCTGGGCCCAGACTTTCAGTCATATTTCTTATT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGCAGCAAGATAAACAATaGGGCAGTCACAGAATATCT +
Preference number: 2 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLQQDKQ*GSHRIS
Trigger: AGATATTCTGTGACTGCCTCATTGTTTATCTTGCTG...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATGTTAATTTGGGCAAATaGGCACTTGTGTTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYVNLGK*ALVFGF
Trigger: GAAACCAAACACAAGTGCTCATTTGCCCAAATTAAC...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGACAGTAGGTGGTATCTaGCATCTTGTGCTATGTAAG +
Preference number: 2 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKTVGGI*HLVLCK
Trigger: CTTACATAGCACAAGATGGCAGATACCACCTACTGT...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGTCAAAGCATCCTGCCTaGTTATATCAGTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKSKHPA*LYQSLT
Trigger: AGTGAGAGACTGATATAAGCAGGCAGGATGCTTTGA...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp GTGCTTCATATTCACCAATCATTTGTCCAATATATTTTTGGTGAGGAACACAGAACGTCTCCAATTGTGTaGCACAAGGGAGCAAAACAT +
Preference number: 2 (lower is better)
Translates to: VLHIHQSFVQYIFGEEHRTSPIV*HKGAKH
Trigger: ATGTTTTGCTCCCTTGTGGCACACAATTGGAGACGT...TCTGTGTTCCTCACCAAAAATATATTGGACAAATGATTGGTGAATATGAAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR-3UTR CCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTCAGAGCTGCATTTCTTaGCTGGGATTTAACAAGTTT +
Preference number: 2 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCQSCIS*LGFNKF
Trigger: AAACTTGTTAAATCCCAGCCAAGAAATGCAGCTCTG...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTCCAACAAGAATAAACTaGCATGACCTGAACATACCT +
Preference number: 2 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCPTRIN*HDLNIP
Trigger: AGGTATGTTCAGGTCATGCCAGTTTATTCTTGTTGG...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATTCAGGGTTAGCTTTCTaGACAATAGAATCATCCAGA +
Preference number: 2 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYSGLAF*TIESSR
Trigger: TCTGGATGATTCTATTGTCCAGAAAGCTAACCCTGA...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATCAGTATGCAATGTGTTaGACATATATGAGGTCTACA +
Preference number: 2 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYQYAMC*TYMRST
Trigger: TGTAGACCTCATATATGTTCAACACATTGCATACTG...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACATATTAAAGGACTGTaGGGCTTCAGAAAAGAGTGG +
Preference number: 2 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTHIKGL*GFRKEW
Trigger: CCACTCTTTTCTGAAGCCGCACAGTCCTTTAATATG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGTCTGACTTTGGTAATTaGGTAGAACATGCTAGAGAA +
Preference number: 2 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLSDFGN*VEHARE
Trigger: TTCTCTAGCATGTTCTACCCAATTACCAAAGTCAGA...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTATCTGACTTTGGTAATTaGGTAGAACATGCTAGAGAA +
Preference number: 2 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLSDFGN*VEHARE
Trigger: TTCTCTAGCATGTTCTACCCAATTACCAAAGTCAGA...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTAGGACTGATGTGTTTTaGCATATACCAAATTTGAGG +
Preference number: 2 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCRTDVF*HIPNLR
Trigger: CCTCAAATTTGGTATATGCCAAAACACATCAGTCCT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAAGGCAAGATAATCAGTaGAAGGTACACAAAGGCATG +
Preference number: 2 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTRQDNQ*KVHKGM
Trigger: CATGCCTTTGTGTACCTTCCACTGATTATCTTGCCT...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGTGCTATCTTGAAATATaGAATTCCTATCCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLCYLEI*NSYPSL
Trigger: AAGGGAGGGATAGGAATTCCATATTTCAAGATAGCA...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 90 bp AAGTACTGTTTTCCCCCTTTCAACTATATTACATTATGCCTGAATTaGAGAGGGAAGGAAGGTCCTAAAGTAAGGCAAAGGATTCATTTA +
Preference number: 2 (lower is better)
Translates to: KYCFPPFNYITLCLN*RGKEGPKVRQRIHL
Trigger: TAAATGAATCCTTTGCCTTACTTTAGGACCTTCCTTCCCTCTCAAATTCAGGCATAATGTAATATAGTTGAAAGGGGGAAAACAGTACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAATCAGGAAAACCAAATaGGAAGCCCCACATATAGAA +
Preference number: 2 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTIRKTK*EAPHIE
Trigger: TTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGAT...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTTGTCACACTTATTTCTaGCACTATTACTCACATTCT +
Preference number: 2 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCCHTYF*HYYSHS
Trigger: AGAATGTGAGTAATAGTGGCAGAAATAAGTGTGACA...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTATGTCACACTTATTTCTaGCACTATTACTCACATTCT +
Preference number: 2 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLCHTYF*HYYSHS
Trigger: AGAATGTGAGTAATAGTGGCAGAAATAAGTGTGACA...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGAATACCTGCTCCAAATaGAAGATGATATTTGTAAGG +
Preference number: 2 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLNTCSK*KMIFVR
Trigger: CCTTACAAATATCATCTTGCATTTGGAGCAGGTATT...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGCATCTCTCCATTAAATaGGAGCTTATTACAGAGCAT +
Preference number: 2 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKHLSIK*ELITEH
Trigger: ATGCTCTGTAATAAGCTCCCATTTAATGGAGAGATG...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 90 bp GTTTACATAACTATCTGGTTAATTTGGGCAAATGAGCACTTGTGTTaGGTTTCTAACTTTGCTGGAAGGTGTTGGTCTAATAAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: VYITIWLIWANEHLC*VSNFAGRCWSNKEN
Trigger: GTTTTCTTTATTAGACCAACACCTTCCAGCAAAGTTAGAAACCAAACACAAGTGCTCATTTGCCCAAATTAACCAGATAGTTATGTAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR TCA 90 bp GTGCTTCATATTCACCAATCATTTGTCCAATATATTTTTGGTGAGGAACACAGAAAGAAATCGAAAGACTaGTATACAGCAAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: VLHIHQSFVQYIFGEEHRKKSKD*YTARHQ
Trigger: TTGATGCCTTGCTGTATATCAGTCTTTCGATTTCTT...TCTGTGTTCCTCACCAAAAATATATTGGACAAATGATTGGTGAATATGAAGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR-3UTR GCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACATGGAAAACACCGTACTaGCAAAATAGGTACACTAAA +
Preference number: 2 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTWKTPY*QNRYTK
Trigger: TTTAGTGTACCTATTTTGGCAGTACGGTGTTTTCCA...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGTCAACTTACTCTATATaGAATAGCTCTTCCCAAGTA +
Preference number: 2 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKSTYSI*NSSSQV
Trigger: TACTTGGGAAGAGCTATTGCATATAGAGTAAGTTGA...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR GCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGATGTGCAAGGCAGTATaGAATGTGTTGAACATATAT +
Preference number: 2 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKMCKAV*NVLNIY
Trigger: ATATATGTTCAACACATTGCATACTGCCTTGCACAT...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 72 bp AGTGGTCACCTCAGTCAGCAGCCAGCATCGAAGTCATaGATCAAGAACCTCGCCAGGAGGCAATGCCTAATT +
Preference number: 3 (lower is better)
Translates to: SGHLSQQPASKS*IKNLARRQCLI
Trigger: AATTAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTGACTGAGGTGACCACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTATCCTTCCCTTGGCATTaGCCAGTAAACTTTAACAGT +
Preference number: 3 (lower is better)
Translates to: QQPASKSCIKNLARRQCLSFPWH*PVNFNS
Trigger: ACTGTTAAAGTTTACTGGCAAATGCCAAGGGAAGGA...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR TCA 72 bp ATCAAAGCATCCTGCCTGCTTATATCAGTCTCTCACTaGAGGATAAAATACCCTACGGGGCCATGCCTAGCG +
Preference number: 3 (lower is better)
Translates to: IKASCLLISVSH*RIKYPTGPCLA
Trigger: CGCTAGGCATGGCCCCGTAGGGTATTTTATCCTTCAGTGAGAGACTGATATAAGCAGGCAGGATGCTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 72 bp TTCCCTTTGGACGCAGGTTTCAGGCTAATCTATTTGTaGACACACCATCCTCTAAATGGGATGCCTCCAACC +
Preference number: 3 (lower is better)
Translates to: FPLDAGFRLIYL*THHPLNGMPPT
Trigger: GGTTGGAGGCATCCCATTTAGAGGATGGTGTGTGCACAAATAGATTAGCCTGAAACCTGCGTCCAAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CCA 72 bp CAGGCTAATCTATTTGTGCACACACCATCCTCTAAATaGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: QANLFVHTPSSK*DASNPQNVSCQ
Trigger: CTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAGAGGATGGTGTGTGCACAAATAGATTAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp GTTTCCATAAATGTGATCCACAAGAACTGGGACATGTTCCAAACTGCACTGTGTGTTGCACGTCTCCAATaGTGTGCCACAAGGGAGCAA +
Preference number: 3 (lower is better)
Translates to: VSINVIHKNWDMFQTALCVARLQ*CATREQ
Trigger: TTGCTCCCTTGTGGCACACAATTGGAGACGTGCAAC...ACACAGTGCAGTTTGGAACATGTCCCAGTTCTTGTGGATCACATTTATGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR TCA 72 bp AGTCAAAGTTGGGAGCCTGAGGTTTCCTCTCCCACCTaGGATCCACAACTGATTCATTGGTTTTCTGTCTTC +
Preference number: 3 (lower is better)
Translates to: SQSWEPEVSSPT*DPQLIHWFSVF
Trigger: GAAGACAGAAAACCAATGAATCAGTTGTGGATCTCAGGTGGGAGAGGAAACCTCAGGCTCCCAACTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp TACCTATTCACATCATACAGTAACAAAATCCACATCTCACCACTGCATCCTCAAGGTGGCAGGTGTGTTTaGAGGCCAGCAGTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: YLFTSYSNKIHISPLHPQGGRCV*RPAVFC
Trigger: ACAAAACACTGCTGGCCTCAAAACACACCTGCCACC...TTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGAATAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR GCA 72 bp AATGGGCTGAACCACCCATGTCTTCTCTGTGTAGTTTaGCCCCAAACACTCACAGGAGCTAAAAATCATAAA +
Preference number: 3 (lower is better)
Translates to: NGLNHPCLLCVV*PQTLTGAKNHK
Trigger: TTTATGATTTTTAGCTCCTGTGAGTGTTTGGGGGCAAACTACACAGAGAAGACATGGGTGGTTCAGCCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 72 bp TCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATaGCTAATTACATTTGTACTATACACTCTGTTCCTC +
Preference number: 3 (lower is better)
Translates to: SKSCIKNLARRQ*LITFVLYTLFL
Trigger: GAGGAACAGAGTGTATAGTACAAATGTAATTAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTATCCTTCCCTTGGCATTaGCCAGTAAACTTTAACAGT +
Preference number: 3 (lower is better)
Translates to: LNGMPPTPKTLVARKKELSFPWH*PVNFNS
Trigger: ACTGTTAAAGTTTACTGGCAAATGCCAAGGGAAGGA...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CCA 72 bp ATGAGTCCTCACAATGTGCAGGGCACAAGTAGAATCTaGAAAACACCGTACTGCCAAAATAGGTACACTAAA +
Preference number: 3 (lower is better)
Translates to: MSPHNVQGTSRI*KTPYCQNRYTK
Trigger: TTTAGTGTACCTATTTTGGCAGTACGGTGTTTTCCAGATTCTACTTGTGCCCTGCACATTGTGAGGACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CCA 72 bp GTTCTTAGCAAAGAGTTTGGTTTTACAGTGTTAACATaGCCTGGTGAGAGTAGAGAAGTCAAAGTTGGGAGC +
Preference number: 3 (lower is better)
Translates to: VLSKEFGFTVLT*PGESREVKVGS
Trigger: GCTCCCAACTTTGACTTCTCTACTCTCACCAGGCCATGTTAACACTGTAAAACCAAACTCTTTGCTAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAGGGGTGAAGGTGGTGTaGGAGACAGTTACAGAGCTT +
Preference number: 3 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTGVKVV*ETVTEL
Trigger: AAGCTCTGTAACTGTCTCCAACACCACCTTCACCCC...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTACGATCTACTATGTATTaGCTTTCCTGCAAACTACTG +
Preference number: 3 (lower is better)
Translates to: LNGMPPTPKTLVARKKELRSTMY*LSCKLL
Trigger: CAGTAGTTTGCAGGAAAGCAAATACATAGTAGATCG...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAGGGATTATTAGATTGTaGTACAGTAGGTGGTATCTG +
Preference number: 3 (lower is better)
Translates to: LNGMPPTPKTLVARKKELGIIRL*YSRWYL
Trigger: CAGATACCACCTACTGTACAACAATCTAATAATCCC...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATACAGGCAAAGCATTGTaGTCACACTTATTTCTGCCA +
Preference number: 3 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYTGKAL*SHLFLP
Trigger: TGGCAGAAATAAGTGTGACAACAATGCTTTGCCTGT...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 72 bp GAACAACAGGCAAAGCATTGTTGTCACACTTATTTCTaGCACTATTACTCACATTCTGCACAGATAGGACAA +
Preference number: 3 (lower is better)
Translates to: EQQAKHCCHTYF*HYYSHSAQIGQ
Trigger: TTGTCCTATCTGTGCAGAATGTGAGTAATAGTGGCAGAAATAAGTGTGACAACAATGCTTTGCCTGTTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 72 bp GCATTCTTTAGAAGGCTCAGCAACCACTATGGATACTaGCAGGAAATCATTCCAAACACTCTCATTTTGAAA +
Preference number: 3 (lower is better)
Translates to: AFFRRLSNHYGY*QEIIPNTLILK
Trigger: TTTCAAAATGAGAGTGTTTGGAATGATTTCCTGGCAGTATCCATAGTGGTTGCTGAGCCTTCTAAAGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR-3UTR CAA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATATACTATTCCTTCCCTaGGCATTTGCCAGTAAACTT +
Preference number: 3 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYILFLP*AFASKL
Trigger: AAGTTTACTGGCAAATGCCAAGGGAAGGAATAGTAT...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATAATGAGCACTTGTGTTaGGTTTCTAACTTTGCTGGA +
Preference number: 3 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYNEHLC*VSNFAG
Trigger: TCCAGCAAAGTTAGAAACCAAACACAAGTGCTCATT...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 72 bp TTTCTTCAGATGATTAAAAGCAGTTTCGGCTCTGTATaGAGGATCTGTCCTCTAGTATCACAAATGAACAGA +
Preference number: 3 (lower is better)
Translates to: FLQMIKSSFGSV*RICPLVSQMNR
Trigger: TCTGTTCATTTGTGATACTAGAGGACAGATCCTGCATACAGAGCCGAAACTGCTTTTAATCATCTGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 72 bp TCACATCATACAGTAACAAAATCCACATCTCACCACTaGATCCTCAACTCCTTCTGGCTAAATATTTCTACA +
Preference number: 3 (lower is better)
Translates to: SHHTVTKSTSHH*ILNSFWLNIST
Trigger: TGTAGAAATATTTAGCCAGAAGGAGTTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR-3UTR CAA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTAGTATCCTTTGGGTATTaGCATTTTTGCTCTCTACTT +
Preference number: 3 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLVSFGY*HFCSLL
Trigger: AAGTAGAGAGCAAAAATGCAAATACCCAAAGGATAC...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGGTGGTATCTGCCATCTaGTGCTATGTAAGAGAAAAT +
Preference number: 3 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKVVSAI*CYVREN
Trigger: ATTTTCTCTTACATAGCACAAGATGGCAGATACCAC...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGGGGATTATTAGATTGTaGTACAGTAGGTGGTATCTG +
Preference number: 3 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKGIIRL*YSRWYL
Trigger: CAGATACCACCTACTGTACAACAATCTAATAATCCC...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGGTAGGGATTATTAGATaGTTGTACAGTAGGTGGTAT +
Preference number: 3 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLVGIIR*LYSRWY
Trigger: ATACCACCTACTGTACAACAATCTAATAATCCCTAC...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATCTGAAAGCTGTTAGTTaGATGTTAGATCAATCACTG +
Preference number: 3 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYLKAVS*MLDQSL
Trigger: CAGTGATTGATCTAACATCAAACTAACAGCTTTCAG...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR GCA 72 bp AAGTACTGTTTTCCCCCTTTCAACTATATTACATTATaGCTGAATTTGAGAGGGAAGGAAGGTCCTAAAGTA +
Preference number: 3 (lower is better)
Translates to: KYCFPPFNYITL*LNLRGKEGPKV
Trigger: TACTTTAGGACCTTCCTTCCCTCTCAAATTCAGGCATAATGTAATATAGTTGAAAGGGGGAAAACAGTACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CCA 72 bp CAAAGTGTTTTGTTTTGCACATACTATTCCTTCCCTTaGCATTTGCCAGTAAACTTTAACAGTCACTTCATG +
Preference number: 3 (lower is better)
Translates to: QSVLFCTYYSFP*HLPVNFNSHFM
Trigger: CATGAAGTGACTGTTAAAGTTTACTGGCAAATGCCAAGGGAAGGAATAGTATGTGCAAAACAAAACACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CCA 72 bp AATAGTTTACACACCAAAGATAGGCAAGATAATCAGTaGAAGGTACACAAAGGCATGGAGCACTATAAAACT +
Preference number: 3 (lower is better)
Translates to: NSLHTKDRQDNQ*KVHKGMEHYKT
Trigger: AGTTTTATAGTGCTCCATGCCTTTGTGTACCTTCCACTGATTATCTTGCCTATCTTTGGTGTGTAAACTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR-3UTR CAA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAATACTATTCCTTCCCTaGGCATTTGCCAGTAAACTT +
Preference number: 3 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTILFLP*AFASKL
Trigger: AAGTTTACTGGCAAATGCCAAGGGAAGGAATAGTAT...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CCA 72 bp AGACATATTAAAGGACTGTGCGGCTTCAGAAAAGAGTaGGTTAAGAGCCTTAGAAGATATGAAAATAGTTTA +
Preference number: 3 (lower is better)
Translates to: RHIKGLCGFRKE*VKSLRRYENSL
Trigger: TAAACTATTTTCATATCTTCTAAGGCTCTTAACCCACTCTTTTCTGAAGCCGCACAGTCCTTTAATATGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp GCACGTCTCCAATTGTGTGCCACAAGGGAGCAAAACATCCAACGGCTTCTTAACCCGCCACCTCCTCGCTaGTCTCGGCCATGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: ARLQLCATREQNIQRLLNPPPPR*SRPCWR
Trigger: CCGCCAACATGGCCGAGACCAGCGAGGAGGTGGCGG...GTTAAGAAGCCGTTGGATGTTTTGCTCCCTTGTGGCACACAATTGGAGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR GCA 90 bp CACAGTTGCACGTCTCCAATTGTGTGCCACAAGGGAGCAAAACATCCAACGGCTTCCTTCACAACCCGCTaGACCAGCACCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: HSCTSPIVCHKGAKHPTASFTTR*TSTATS
Trigger: GGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGA...AGCCGTTGGATGTTTTGCTCCCTTGTGGCACACAATTGGAGACGTGCAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAATGCACTGGCAAACCTaGCTTGCTCCACGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLMHWQT*LAPRSD
Trigger: GTCGGAACGTGGAGCAAGCCAGGTTTGCCAGTGCAT...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTACCTGCTGGGATAAGGTaGAAGTCACTCAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLPAGIR*KSLKVP
Trigger: GGGGACTTTGAGTGACTTGCACCTTATCCCAGCAGG...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS-3UTR CCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTACCGCCACCTCCTCGCTaGTCTCGGCCATGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELPPPPR*SRPCWR
Trigger: CCGCCAACATGGCCGAGACCAGCGAGGAGGTGGCGG...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR TCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTACCATCTCTTCTTGTATaGGTCGCTGTGCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLPSLLV*VAVPFL
Trigger: CAGAAAGGGCACAGCGACTCATACAAGAAGAGATGG...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTATCCATCTACTTCCATTaGTTGAGACAGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLSIYFH*LRQLGA
Trigger: GGCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGA...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTACAGCCATTTCCTGTATaGACTGGCAAACCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLQPFPV*TGKPGL
Trigger: CAAGCCAGGTTTGCCAGTGCATACAGGAAATGGCTG...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAATTTCCTGTATGCACTaGCAAACCTGGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLISCMH*QTWLAP
Trigger: TGGAGCAAGCCAGGTTTGCCAGTGCATACAGGAAAT...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGACACTAAAGGCGGGGTaGAGGTGGTGTTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQTLKAG*RWCWRQ
Trigger: CTGTCTCCAACACCACCTTCACCCCGCCTTTAGTGT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTATACCAATACAGAGACTaGTTGCAGAAGACTACAGCA +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLYQYRD*LQKTTA
Trigger: TGCTGTAGTCTTCTGCAATCAGTCTCTGTATTGGTA...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTACTGTGGTCTGAAACGTaGATAGATGCCCAATGTTTA +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLLWSET*IDAQCL
Trigger: TAAACATTGGGCATCTATGCACGTTTCAGACCACAG...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTTCCTTCACAACCCGCTaGACCAGCACCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCSFTTR*TSTATS
Trigger: GGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGA...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTACTATTACTCACATTCTaGACAGATAGGACAACTGAC +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLLLLTF*TDRTTD
Trigger: GTCAGTTGTCCTATCTGTGCAGAATGTGAGTAATAG...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAGTCAGAATTGAGATGTaGTGTGAGTGCAAAATACAC +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLVRIEM*CECKIH
Trigger: GTGTATTTTGCACTCACAGCACATCTCAATTCTGAC...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GCACAGTTGCACGTCTCCAATTGTGTGCCACAAGGGAGCAAAACATCCAACGGCGGACATGTTCCAAACTaGACTGTGTTAAAAACTGCC +
Preference number: 4 (lower is better)
Translates to: AQLHVSNCVPQGSKTSNGGHVPN*TVLKTA
Trigger: GGCAGTTTTTAACACAGTGCAGTTTGGAACATGTCC...GCCGTTGGATGTTTTGCTCCCTTGTGGCACACAATTGGAGACGTGCAACTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTGGTCTCGGCCATGTTaGCGGCGGCCGCGACAGTTC +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNWSRPC*RRPRQF
Trigger: GAACTGTCGCGGCCGCCGCCAACATGGCCGAGACCA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTACAGAGCTGCATTTCTTaGCTGGGATTTAACAAGTTT +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLQSCIS*LGFNKF
Trigger: AAACTTGTTAAATCCCAGCCAAGAAATGCAGCTCTG...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAAGCTGGCTTGGTACATaGTCACATAAGAACAAATCT +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLSWLGT*SHKNKS
Trigger: AGATTTGTTCTTATGTGACCATGTACCAAGCCAGCT...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAAGCACCCATCGCCTGTaGATCCATGTTTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELSTHRL*IHVSGL
Trigger: GAGTCCAGAAACATGGATTCACAGGCGATGGGTGCT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAAAATATACTCCTTGGTaGAAAGATGTCAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLKYTPW*KDVNSL
Trigger: GAGACTGTTGACATCTTTTCACCAAGGAGTATATTT...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGTCCTTCACAACCCGCTaGACCAGCACCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKSFTTR*TSTATS
Trigger: GGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGA...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTATGGGTATCTCCCTGCTaGTTCACCACAGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELWVSPC*FTTDLH
Trigger: ATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCA...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATCTGGCAAACCTGGCTTaGTCCACGTTCCGACAGGTG +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYLANLA*STFRQV
Trigger: CACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAG...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR GCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGGTAGAAATCGGGTCTTaGTATGTGGCCCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQVEIGS*YVAQVG
Trigger: ACCAACCTGGGCCACATAGCAAGACCCGATTTCTAC...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAGATCTACTATGTATTTaGTTTCCTGCAAACTACTGC +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLDLLCI*FPANYC
Trigger: GCAGTAGTTTGCAGGAAAGCAAATACATAGTAGATC...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCCAGCATCGAAGTCATaGATCAAGAACCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECPASKS*IKNLAR
Trigger: CCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGG...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GCACAGTTGCACGTCTCCAATTGTGTGCCACAAGGGAGCAAAACATCCAACGGCAACCACTATGGATACTaGCAGGAAATCATTCCAAAC +
Preference number: 4 (lower is better)
Translates to: AQLHVSNCVPQGSKTSNGNHYGY*QEIIPN
Trigger: GTTTGGAATGATTTCCTGGCAGTATCCATAGTGGTT...GCCGTTGGATGTTTTGCTCCCTTGTGGCACACAATTGGAGACGTGCAACTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTCCGCTTCAGGCGTTTaGTTTCCTGGGAATAGCCTT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQSASGV*FPGNSL
Trigger: AAGGCTATTCCCAGGAAACCAAACGCCTGAAGCGGA...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGACAGCCACAAACACCTaGGGCTCAAGCAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQTATNT*GSSNPS
Trigger: AGAAGGATTGCTTGAGCCCCAGGTGTTTGTGGCTGT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTATCTGACTTTGGTAATTaGGTAGAACATGCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLSDFGN*VEHARE
Trigger: TTCTCTAGCATGTTCTACCCAATTACCAAAGTCAGA...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGCAGGTGGACAATACTTaGTCAATGAACCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQQVDNT*SMNLCS
Trigger: GGAGCACAGGTTCATTGATCAAGTATTGTCCACCTG...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTTAGTGGAATGGGCTaGACCACCCATGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQFSGMG*TTHVFS
Trigger: AGAGAAGACATGGGTGGTTCAGCCCATTCCACTAAA...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTCAAAGTTGGGAGCCTaGGGTTTCCTCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYSKLGA*GFLSHL
Trigger: CAGGTGGGAGAGGAAACCTCAGGCTCCCAACTTTGA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGCTGGCAAACCTGGCTTaGTCCACGTTCCGACAGGTG +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKLANLA*STFRQV
Trigger: CACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAG...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR GCA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAGCAACTGTATATCTTTaGCTTATGCATTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: QQPASKSCIKNLARRQCLATVYL*LMHLKL
Trigger: CAGTTTCAAATGCATAAGGCAAAGATATACAGTTGC...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATAGACAGCTGGGAGCCTaGTGGGATAAGGTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYRQLGA*WDKVQV
Trigger: GACTTGCACCTTATCCCAGCAGGCTCCCAGCTGTCT...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS-3UTR CCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATATGCACTGGCAAACCTaGCTTGCTCCACGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYMHWQT*LAPRSD
Trigger: GTCGGAACGTGGAGCAAGCCAGGTTTGCCAGTGCAT...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCACAGCCACAAACACCTaGGGCTCAAGCAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECTATNT*GSSNPS
Trigger: AGAAGGATTGCTTGAGCCCCAGGTGTTTGTGGCTGT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 72 bp TGTTTCCCTTTGGACGCAGGTTTCAGGCTAATCTATTaGTGCACACACCATCCTCTAAATGGGATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CFPLDAGFRLIY*CTHHPLNGMPP
Trigger: TGGAGGCATCCCATTTAGAGGATGGTGTGTGCACAAATAGATTAGCCTGAAACCTGCGTCCAAAGGGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 72 bp GGCCTTTATTTTAGGGCAGAGTGCCACTGTTTCCCTTaGGACGCAGGTTTCAGGCTAATCTATTTGTGCACA +
Preference number: 4 (lower is better)
Translates to: GLYFRAECHCFP*DAGFRLIYLCT
Trigger: TGTGCACAAATAGATTAGCCTGAAACCTGCGTCCAAAGGGAAACAGTGGCACTCTGCCCTAAAATAAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATAGCACCCATCGCCTGTaGATCCATGTTTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYSTHRL*IHVSGL
Trigger: GAGTCCAGAAACATGGATTCACAGGCGATGGGTGCT...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAAAATCCACTGTGGTCTaGAACGTGCATAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELKSTVV*NVHRCP
Trigger: TGGGCATCTATGCACGTTTCAGACCACAGTGGATTT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAACACTAAAGGCGGGGTaGAGGTGGTGTTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLTLKAG*RWCWRQ
Trigger: CTGTCTCCAACACCACCTTCACCCCGCCTTTAGTGT...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAGTTTCCTCTCCCACCTaGGATCCACAACTGATTCAT +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELVSSPT*DPQLIH
Trigger: ATGAATCAGTTGTGGATCTCAGGTGGGAGAGGAAAC...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTCAAAGTTGGGAGCCTaGGGTTTCCTCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKSKLGA*GFLSHL
Trigger: CAGGTGGGAGAGGAAACCTCAGGCTCCCAACTTTGA...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGGCCATATGTGACTACTaGGCACTTAAAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQAICDY*ALKMWP
Trigger: TGGCCACATTTTAAGTGCTCAGTAGTCACATATGGC...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTCTACTTCCATTGCTTaGGACAGCTGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYSTSIA*DSWEPA
Trigger: AGCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS-3UTR TCA 90 bp GCACGTCTCCAATTGTGTGCCACAAGGGAGCAAAACATCCAACGGCTTCTTAACAAACTGCCAAGCCAATaGACATTCAATCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ARLQLCATREQNIQRLLNKLPSQ*TFNLGF
Trigger: GAAACCAAGATTGAATGTTCATTGGCTTGGCAGTTT...GTTAAGAAGCCGTTGGATGTTTTGCTCCCTTGTGGCACACAATTGGAGACGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR GCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTAGCTTGGGTATCTCCCTaGTGCTTCACCACAGACCTC +
Preference number: 4 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLAWVSP*CFTTDL
Trigger: GAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGC...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAGCTTGGGTATCTCCCTaGTGCTTCACCACAGACCTC +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLAWVSP*CFTTDL
Trigger: GAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGC...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGACCAAGCATTATAGTTaGTTGGGTATCTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQTKHYS*LGISLL
Trigger: CAGCAGGGAGATACCCAAGCAACTATAATGCTTGGT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGCAGCCATTTCCTGTATaGACTGGCAAACCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRQPFPV*TGKPGL
Trigger: CAAGCCAGGTTTGCCAGTGCATACAGGAAATGGCTG...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR GCA 90 bp GCATCAAAGCATTCTTTAGAAGGCTCAGCAACCACTATGGATACTGCCAGGAAAAGGTCGTCTCTTACTTaGACTAAGGCTCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: ASKHSLEGSATTMDTARKRSSLT*TKAPIL
Trigger: GAGAATGGGAGCCTTAGTGCAAGTAAGAGACGACCT...TTTCCTGGCAGTATCCATAGTGGTTGCTGAGCCTTCTAAAGAATGCTTTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCGCTGTGCCCTTTCTGTaGGAATTGTTCCCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECAVPFL*ELFPSF
Trigger: GAAACTTGGGAACAATTCCCACAGAAAGGGCACAGC...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGAGCATTATAGTTGCTTaGGTATCTCCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQSIIVA*VSPCCF
Trigger: GAAGCAGCAGGGAGATACCCAAGCAACTATAATGCT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGATGCACTGGCAAACCTaGCTTGCTCCACGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKMHWQT*LAPRSD
Trigger: GTCGGAACGTGGAGCAAGCCAGGTTTGCCAGTGCAT...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTACTATGTGGCCCAGGTTaGTCTCAAAGTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLLCGPG*SQSPGL
Trigger: GAGCCCAGGACTTTGAGACCAACCTGGGCCACATAG...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGCATCAAGAAGAATCTTaGCATCTAGCTTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQHQEES*HLAWPS
Trigger: ACTTGGCCAAGCTAGATGTCAAGATTCTTCTTGATG...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGGCCAAAGTACAATACTaGCAGTGGTCACCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRAKVQY*QWSPQS
Trigger: TGACTGAGGTGACCACTGTCAGTATTGTACTTTGGC...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAAGGGCTGTCTGCAGGTaGCAACTGGGTCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTRAVCR*QLGHAV
Trigger: CACAGCATGACCCAGTTGTCACCTGCAGACAGCCCT...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCTTGTATGAGTCGCTGTaGCCTTTCTGTGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECLYESL*PFCGNC
Trigger: ACAATTCCCACAGAAAGGGCACAGCGACTCATACAA...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTTGGGTATCTCCCTGCTaGTTCACCACAGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCWVSPC*FTTDLH
Trigger: ATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCA...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTCTGGCAAACCTGGCTTaGTCCACGTTCCGACAGGTG +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTILANLA*STFRQV
Trigger: CACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAG...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR GCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGACAGTAGGTGGTATCTaGCATCTTGTGCTATGTAAG +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQTVGGI*HLVLCK
Trigger: CTTACATAGCACAAGATGGCAGATACCACCTACTGT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTCAAAGCATCCTGCCTaGTTATATCAGTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQSKHPA*LYQSLT
Trigger: AGTGAGAGACTGATATAAGCAGGCAGGATGCTTTGA...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ATATACAGCAAGGCATCAAAGCATTCTTTAGAAGGCTCAGCAACCACTATGGATTCCACATCTCACCACTaGATCCTCAACTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IYSKASKHSLEGSATTMDSTSHH*ILNSFW
Trigger: CCAGAAGGAGTTGAGGATGCAGTGGTGAGATGTGGA...ATCCATAGTGGTTGCTGAGCCTTCTAAAGAATGCTTTGATGCCTTGCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTCCGCTTCAGGCGTTTaGTTTCCTGGGAATAGCCTT +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYSASGV*FPGNSL
Trigger: AAGGCTATTCCCAGGAAACCAAACGCCTGAAGCGGA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAACAAATTCTGTCTACTaGGGCCAGGCTAGACAACTT +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELTNSVY*GQARQL
Trigger: AAGTTGTCTAGCCTGGCCCCAGTAGACAGAATTTGT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCGGCACAAGTAGAATCTaGAAAACACCGTACTGCCAA +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECGTSRI*KTPYCQ
Trigger: TTGGCAGTACGGTGTTTTCCAGATTCTACTTGTGCC...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp GCATCAAAGCATTCTTTAGAAGGCTCAGCAACCACTATGGATACTGCCAGGAAAGTGATCCACAAGAACTaGGACATGTTCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: ASKHSLEGSATTMDTARKVIHKN*DMFQTA
Trigger: TGCAGTTTGGAACATGTCCCAGTTCTTGTGGATCAC...TTTCCTGGCAGTATCCATAGTGGTTGCTGAGCCTTCTAAAGAATGCTTTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATCCATCTCTTCTTGTATaGGTCGCTGTGCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYPSLLV*VAVPFL
Trigger: CAGAAAGGGCACAGCGACTCATACAAGAAGAGATGG...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAGAGGTGTGTGTGTGTaGACCAATCAGGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRRGVCV*TNQENQ
Trigger: TTGGTTTTCCTGATTGGTTCACACACACACACCTCT...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTGGTACCTCATCCCTaGTTAAGTTCAGTATCAAAG +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQLVPHP*LSSVSK
Trigger: CTTTGATACTGAACTTAATCAGGGATGAGGTACCAA...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTATACCAATACAGAGACTaGTTGCAGAAGACTACAGCA +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELYQYRD*LQKTTA
Trigger: TGCTGTAGTCTTCTGCAATCAGTCTCTGTATTGGTA...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TACCTATTCACATCATACAGTAACAAAATCCACATCTCACCACTGCATCCTCAAGTGGCAGGTGTGTTTTaGGGCCAGCAGTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: YLFTSYSNKIHISPLHPQVAGVF*GQQCFV
Trigger: AACAAAACACTGCTGGCCTCAAAACACACCTGCCAC...TTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGAATAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR GCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGGCTGTAAAACCCAGATaGGATGGGACCAAGCATTAT +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRAVKPR*DGTKHY
Trigger: ATAATGCTTGGTCCCATCGCATCTGGGTTTTACAGC...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTACATATTAAAGGACTGTaGGGCTTCAGAAAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELHIKGL*GFRKEW
Trigger: CCACTCTTTTCTGAAGCCGCACAGTCCTTTAATATG...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAGTTTCGGCTCTGTATaGAGGATCTGTCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRSFGSV*RICPLV
Trigger: TACTAGAGGACAGATCCTGCATACAGAGCCGAAACT...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTACCCTACGGGGCCATaGCTAGCGATGGGAATAAAT +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIYPTGP*LAMGIN
Trigger: ATTTATTCCCATCGCTAGGCATGGCCCCGTAGGGTA...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTATCAAAGCATCCTGCCTaGTTATATCAGTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELSKHPA*LYQSLT
Trigger: AGTGAGAGACTGATATAAGCAGGCAGGATGCTTTGA...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGACCAGCATCGAAGTCATaGATCAAGAACCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGPASKS*IKNLAR
Trigger: CCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGG...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTATCCGCTTCAGGCGTTTaGTTTCCTGGGAATAGCCTT +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLSASGV*FPGNSL
Trigger: AAGGCTATTCCCAGGAAACCAAACGCCTGAAGCGGA...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACTATGTGGCCCAGGTTaGTCTCAAAGTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTLCGPG*SQSPGL
Trigger: GAGCCCAGGACTTTGAGACCAACCTGGGCCACATAG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCGGCTTCAGAAAAGAGTaGGTTAAGAGCCTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECGFRKE*VKSLRR
Trigger: TCTTCTAAGGCTCTTAACCCACTCTTTTCTGAAGCC...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGCCAACAAGAATAAACTaGCATGACCTGAACATACCT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQPTRIN*HDLNIP
Trigger: AGGTATGTTCAGGTCATGCCAGTTTATTCTTGTTGG...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACAGCTGGGAGCCTGCTaGGATAAGGTGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTQLGAC*DKVQVT
Trigger: AGTGACTTGCACCTTATCCCAGCAGGCTCCCAGCTG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS-3UTR CCA 90 bp TTCACATCATACAGTAACAAAATCCACATCTCACCACTGCATCCTCAACTCCTTCAATCATCACATGTGTaGGTTCCTCCTGAAGGCGTT +
Preference number: 4 (lower is better)
Translates to: FTSYSNKIHISPLHPQLLQSSHV*VPPEGV
Trigger: AACGCCTTCAGGAGGAACCCACACATGTGATGATTG...AAGGAGTTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR TCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAAAATATGCCGCCTATaGCACCAAAGGGTTTCATGT +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRKICRL*HQRVSC
Trigger: ACATGAAACCCTTTGGTGTCATAGGCGGCATATTTT...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTTCTACTTCCATTGCTTaGGACAGCTGGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTISTSIA*DSWEPA
Trigger: TGCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGA...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR TCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTCAGGTGGACAATACTTaGTCAATGAACCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCQVDNT*SMNLCS
Trigger: GGAGCACAGGTTCATTGATCAAGTATTGTCCACCTG...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAATTCACCTCTTTCATTaGCTCAAAGTAACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELIHLFH*LKVTSH
Trigger: ATGGCTGGTTACTTTGAGTCAATGAAAGAGGTGAAT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCATTCACCTCTTTCATTaGCTCAAAGTAACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECIHLFH*LKVTSH
Trigger: ATGGCTGGTTACTTTGAGTCAATGAAAGAGGTGAAT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGCTCATCCCACCTACCTaGAAAACTCAGCCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKLIPPT*KTQPLL
Trigger: TAACAAGGGCTGAGTTTTTCAGGTAGGTGGGATGAG...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTTTTAGTGGAATGGGCTaGACCACCCATGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCFSGMG*TTHVFS
Trigger: AGAGAAGACATGGGTGGTTCAGCCCATTCCACTAAA...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTTCTGTCTTCACCATaGACATGGCATATTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYFLSSP*TWHIAA
Trigger: GGCAGCAATATGCCATGTTCATGGTGAAGACAGAAA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCGTTAATTTGGGCAAATaGGCACTTGTGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECVNLGK*ALVFGF
Trigger: GAAACCAAACACAAGTGCTCATTTGCCCAAATTAAC...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATGCTGTAAAACCCAGATaGGATGGGACCAAGCATTAT +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYAVKPR*DGTKHY
Trigger: ATAATGCTTGGTCCCATCGCATCTGGGTTTTACAGC...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTCCATCTACTTCCATTaGTTGAGACAGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNSIYFH*LRQLGA
Trigger: GGCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR GCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACCAGCCATTTCCTGTATaGACTGGCAAACCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNQPFPV*TGKPGL
Trigger: CAAGCCAGGTTTGCCAGTGCATACAGGAAATGGCTG...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR GCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGCTTCTCTGTGTAGTTTaGCCCCAAACACTCACAGGA +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKLLCVV*PQTLTG
Trigger: TCCTGTGAGTGTTTGGGGGCAAACTACACAGAGAAG...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTACCCTACGGGGCCATaGCTAGCGATGGGAATAAAT +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNYPTGP*LAMGIN
Trigger: ATTTATTCCCATCGCTAGGCATGGCCCCGTAGGGTA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTATTTTAGGGCAGAGTaGCACTGTTTCCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYYFRAE*HCFPLD
Trigger: GTCCAAAGGGAAACAGTGGCACTCTGCCCTAAAATA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTGTGACAACTGGGTCATaGTGTGAGGAAACCTACCAT +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCVTTGS*CEETYH
Trigger: ATGGTAGGTTTCCTCACAGCATGACCCAGTTGTCAC...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS-3UTR CCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGGCTGTGCCCTTTCTGTaGGAATTGTTCCCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKAVPFL*ELFPSF
Trigger: GAAACTTGGGAACAATTCCCACAGAAAGGGCACAGC...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCAAGGGTTTCATGTCCTaGGTAGGAATCAATAAGATC +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECKGFMS*VGINKI
Trigger: GATCTTATTGATTCCTACCCAGGACATGAAACCCTT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATATTTCCTGTATGCACTaGCAAACCTGGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYISCMH*QTWLAP
Trigger: TGGAGCAAGCCAGGTTTGCCAGTGCATACAGGAAAT...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCGATACGGCTATAATGTaGATACTTTGGTACCTCATC +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECDTAIM*ILWYLI
Trigger: GATGAGGTACCAAAGTATCCACATTATAGCCGTATC...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAGGCAAGATAATCAGTaGAAGGTACACAAAGGCATG +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRRQDNQ*KVHKGM
Trigger: CATGCCTTTGTGTACCTTCCACTGATTATCTTGCCT...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCACATACATGTGTGTGTaGCCCAACAAGAATAAACTG +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECTYMCV*PNKNKL
Trigger: CAGTTTATTCTTGTTGGGCCACACACACATGTATGT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTTGCTGGAAGGTGTTaGTCTAATAAAGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQFAGRC*SNKENC
Trigger: GCAGTTTTCTTTATTAGACCAACACCTTCCAGCAAA...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGACTATCTGGTTAATTTaGGCAAATGAGCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQTIWLI*ANEHLC
Trigger: ACACAAGTGCTCATTTGCCCAAATTAACCAGATAGT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGACAGCTCTTTCATGTGTaGGTTCCTCCTGAAGGCGTT +
Preference number: 4 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGQLFHV*VPPEGV
Trigger: AACGCCTTCAGGAGGAACCCACACATGAAAGAGCTG...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS-3UTR CCA 90 bp ATATACAGCAAGGCATCAAAGCATTCTTTAGAAGGCTCAGCAACCACTATGGATGCTCAGCAACCACTATaGATACTGCCAGGAAATCAT +
Preference number: 4 (lower is better)
Translates to: IYSKASKHSLEGSATTMDAQQPL*ILPGNH
Trigger: ATGATTTCCTGGCAGTATCCATAGTGGTTGCTGAGC...ATCCATAGTGGTTGCTGAGCCTTCTAAAGAATGCTTTGATGCCTTGCTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR TCA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCGGCAAGGAGGTTTCCTaGATTAGCTGTTGTAGCACC +
Preference number: 4 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRGKEVS*ISCCST
Trigger: GGTGCTACAACAGCTAATTCAGGAAACCTCCTTGCC...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAAATCCACTGTGGTCTaGAACGTGCATAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNKSTVV*NVHRCP
Trigger: TGGGCATCTATGCACGTTTCAGACCACAGTGGATTT...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGATCAGGAAAACCAAATaGGAAGCCCCACATATAGAA +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRIRKTK*EAPHIE
Trigger: TTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGAT...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGTTGGTACCTCATCCCTaGTTAAGTTCAGTATCAAAG +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRLVPHP*LSSVSK
Trigger: CTTTGATACTGAACTTAATCAGGGATGAGGTACCAA...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACCTCATCCCACCTACCTaGAAAACTCAGCCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNLIPPT*KTQPLL
Trigger: TAACAAGGGCTGAGTTTTTCAGGTAGGTGGGATGAG...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTGAAGACACACCCCTaGAGTAAGAAAGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYLKTHP*SKKGKV
Trigger: TACCTTTCCTTTCTTACTTCAGGGGTGTGTCTTCAA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTACAGTATGCAATGTGTTaGACATATATGAGGTCTACA +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELQYAMC*TYMRST
Trigger: TGTAGACCTCATATATGTTCAACACATTGCATACTG...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTATTAATGGCCAATGCCTaGCCCTGCACCATAGATTAT +
Preference number: 4 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLLMANA*PCTIDY
Trigger: ATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAA...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGTTAATGGCCAATGCCTaGCCCTGCACCATAGATTAT +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLLMANA*PCTIDY
Trigger: ATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAA...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATGCCATATGTGACTACTaGGCACTTAAAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYAICDY*ALKMWP
Trigger: TGGCCACATTTTAAGTGCTCAGTAGTCACATATGGC...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTCTACTTCCATTGCTTaGGACAGCTGGGAGCCATTT +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNSTSIA*DSWEPF
Trigger: AAATGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415701.6
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTTTCCTCACGTTCCATaGAGTGGTAAAGTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIFPHVP*SGKVWV
Trigger: AACCCAGACTTTACCACTGCATGGAACGTGAGGAAA...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR GCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGTTGTATGAGTCGCTGTaGCCTTTCTGTGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLLYESL*PFCGNC
Trigger: ACAATTCCCACAGAAAGGGCACAGCGACTCATACAA...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTCTAGCTTGGCCAAGTaGTGTAAAACCCAGATGCGA +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNSSLAK*CKTQMR
Trigger: TCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAGTAGAAATCGGGTCTTaGTATGTGGCCCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTVEIGS*YVAQVG
Trigger: ACCAACCTGGGCCACATAGCAAGACCCGATTTCTAC...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGCTATTACTCACATTCTaGACAGATAGGACAACTGAC +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRLLLTF*TDRTTD
Trigger: GTCAGTTGTCCTATCTGTGCAGAATGTGAGTAATAG...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTCATTAACTTCTCAGTaGCTCCACACATCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYSLTSQ*LHTSLH
Trigger: ATGGAGAGATGTGTGGAGGCACTGAGAAGTTAATGA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTATTTTAGGGCAGAGTaGCACTGTTTCCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIYFRAE*HCFPLD
Trigger: GTCCAAAGGGAAACAGTGGCACTCTGCCCTAAAATA...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGATGAACATGGCATATTaGTGCCCTTTAGGAATATAT +
Preference number: 4 (lower is better)
Translates to: RCSAGRNYTIILSPQECQMNMAY*CPLGIY
Trigger: ATATATTCCTAAAGGGCAGCAATATGCCATGTTCAT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTATCACTTGCAATGTTGTaGAACTGTATATCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELSLAML*NCISLP
Trigger: AGGCAAAGATATACAGTTGCACAACATTGCAAGTGA...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATCTCGCCAGGAGGCAATaGCTAATTACATTTGTACTA +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYLARRQ*LITFVL
Trigger: TAGTACAAATGTAATTAGGCATTGCCTCCTGGCGAG...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATCTTTAATGGCCAATaGCTGACCCTGCACCATAGA +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLIFNGQ*LTLHHR
Trigger: TCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGAT...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTATCTTTAATGGCCAATaGCTGACCCTGCACCATAGA +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCIFNGQ*LTLHHR
Trigger: TCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGAT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TACCTATTCACATCATACAGTAACAAAATCCACATCTCACCACTGCATCCTCAAACGTCTCCAATTGTGTaGCACAAGGGAGCAAAACAT +
Preference number: 4 (lower is better)
Translates to: YLFTSYSNKIHISPLHPQTSPIV*HKGAKH
Trigger: ATGTTTTGCTCCCTTGTGGCACACAATTGGAGACGT...TTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGAATAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCAAAAGGAGCTTGTTGTaGACATATGGTAAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECKRSLL*TYGKRN
Trigger: GTTCCTTTTACCATATGTCCACAACAAGCTCCTTTT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTTCCCAAGTTTCCTTTaGTCACAAAGGAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIFPSFL*SQRKAR
Trigger: CCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAA...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCTACTATTCCTTCCCTTaGCATTTGCCAGTAAACTTT +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECYYSFP*HLPVNF
Trigger: AAAGTTTACTGGCAAATGCCAAGGGAAGGAATAGTA...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAACAAATTCTGTCTACTaGGGCCAGGCTAGACAACTT +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLTNSVY*GQARQL
Trigger: AAGTTGTCTAGCCTGGCCCCAGTAGACAGAATTTGT...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTGGCACAAGTAGAATCTaGAAAACACCGTACTGCCAA +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIGTSRI*KTPYCQ
Trigger: TTGGCAGTACGGTGTTTTCCAGATTCTACTTGTGCC...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGACATACATGTGTGTGTaGCCCAACAAGAATAAACTG +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRTYMCV*PNKNKL
Trigger: CAGTTTATTCTTGTTGGGCCACACACACATGTATGT...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCACCTCTACCAAAGATaGAACTATAACACAGAAATC +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECHLYQR*NYNTEI
Trigger: GATTTCTGTGTTATAGTTCCATCTTTGGTAGAGGTG...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAATGAGCACTTGTGTTTaGTTTCTAACTTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELMSTCV*FLTLLE
Trigger: TTCCAGCAAAGTTAGAAACCAAACACAAGTGCTCAT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCACAATACTTTATAGCTaGCTTGGTACATGGTCACAT +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECTILYS*LGTWSH
Trigger: ATGTGACCATGTACCAAGCCAGCTATAAAGTATTGT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATGGTAAAAGGAACTTaGCACACCAGCTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIMVKGT*HTSSPH
Trigger: GTGTGGAGAGCTGGTGTGTCAAGTTCCTTTTACCAT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR TCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTCATCAAGAAGAATCTTaGCATCTAGCTTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCHQEES*HLAWPS
Trigger: ACTTGGCCAAGCTAGATGTCAAGATTCTTCTTGATG...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAAAAATATGCCGCCTATaGCACCAAAGGGTTTCATGT +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLKICRL*HQRVSC
Trigger: ACATGAAACCCTTTGGTGTCATAGGCGGCATATTTT...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACAGGTGGACAATACTTaGTCAATGAACCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTQVDNT*SMNLCS
Trigger: GGAGCACAGGTTCATTGATCAAGTATTGTCCACCTG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGAGGTGTGTGTGTGTaGACCAATCAGGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGRGVCV*TNQENQ
Trigger: TTGGTTTTCCTGATTGGTTCACACACACACACCTCT...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATCCTGAGATCCACAACTaGTTCATTGGTTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYPEIHN*FIGFLS
Trigger: AGACAGAAAACCAATGAATCAGTTGTGGATCTCAGG...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTGTTTCCTCTCCCACCTaGGATCCACAACTGATTCAT +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIVSSPT*DPQLIH
Trigger: ATGAATCAGTTGTGGATCTCAGGTGGGAGAGGAAAC...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTGCCAAAGTACAATACTaGCAGTGGTCACCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIAKVQY*QWSPQS
Trigger: TGACTGAGGTGACCACTGTCAGTATTGTACTTTGGC...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGAACTGGGTCATGCTGTaGGGAAACCTACCATTTAAG +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKNWVML*GNLPFK
Trigger: CTTAAATGGTAGGTTTCCTCACAGCATGACCCAGTT...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS-3UTR GCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACACCAAGCATTATAGTTaGTTGGGTATCTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNTKHYS*LGISLL
Trigger: CAGCAGGGAGATACCCAAGCAACTATAATGCTTGGT...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACATCTAGCTTGGCCAAGTaGTGTAAAACCCAGATGCGA +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTSSLAK*CKTQMR
Trigger: TCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGA...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTCTGTGGTCTGAAACGTaGATAGATGCCCAATGTTTA +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVILWSET*IDAQCL
Trigger: TAAACATTGGGCATCTATGCACGTTTCAGACCACAG...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACTTCTCTGTGTAGTTTaGCCCCAAACACTCACAGGA +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTLLCVV*PQTLTG
Trigger: TCCTGTGAGTGTTTGGGGGCAAACTACACAGAGAAG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGCATATTAAAGGACTGTaGGGCTTCAGAAAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKHIKGL*GFRKEW
Trigger: CCACTCTTTTCTGAAGCCGCACAGTCCTTTAATATG...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGTGGAAAACACCGTACTaGCAAAATAGGTACACTAAA +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRWKTPY*QNRYTK
Trigger: TTTAGTGTACCTATTTTGGCAGTACGGTGTTTTCCA...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCTCAACTTACTCTATATaGAATAGCTCTTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECSTYSI*NSSSQV
Trigger: TACTTGGGAAGAGCTATTGCATATAGAGTAAGTTGA...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTATCAACTTACTCTATATaGAATAGCTCTTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELSTYSI*NSSSQV
Trigger: TACTTGGGAAGAGCTATTGCATATAGAGTAAGTTGA...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTTCATTAACTTCTCAGTaGCTCCACACATCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCSLTSQ*LHTSLH
Trigger: ATGGAGAGATGTGTGGAGGCACTGAGAAGTTAATGA...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTAAAAAGTTCTTCCTCATaGCAAAGATGTTCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LNGMPPTPKTLVARKKELKSSSS*QRCSEK
Trigger: TTTCTCAGAACATCTTTGGCATGAGGAAGAACTTTT...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCAAAAGTTCTTCCTCATaGCAAAGATGTTCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: TRCSAGRNYTIILSPQECKSSSS*QRCSEK
Trigger: TTTCTCAGAACATCTTTGGCATGAGGAAGAACTTTT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTCTCGCCAGGAGGCAATaGCTAATTACATTTGTACTA +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVILARRQ*LITFVL
Trigger: TAGTACAAATGTAATTAGGCATTGCCTCCTGGCGAG...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGAATTTCATCTATGTGTaGGTTCCTCCTGAAGGCGTT +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLNFIYV*VPPEGV
Trigger: AACGCCTTCAGGAGGAACCCACACATAGATGAAATT...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTCCTAGCTTCAGGACATaGGATCAGGCCAATTTCATC +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIPSFRT*DQANFI
Trigger: GATGAAATTGGCCTGATCCCATGTCCTGAAGCTAGG...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTTCCCAAGTTTCCTTTaGTCACAAAGGAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNFPSFL*SQRKAR
Trigger: CCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGAGCATTATAGTTGCTTaGGTATCTCCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKSIIVA*VSPCCF
Trigger: GAAGCAGCAGGGAGATACCCAAGCAACTATAATGCT...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTCCTGTATGCACTaGCAAACCTGGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIISCMH*QTWLAP
Trigger: TGGAGCAAGCCAGGTTTGCCAGTGCATACAGGAAAT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTACATATTTTAGTGGAATaGGCTGAACCACCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLHILVE*AEPPMS
Trigger: AGACATGGGTGGTTCAGCCCATTCCACTAAAATATG...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTGGCTTCAGAAAAGAGTaGGTTAAGAGCCTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIGFRKE*VKSLRR
Trigger: TCTTCTAAGGCTCTTAACCCACTCTTTTCTGAAGCC...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTATTGTTGTACAGTAGGTaGTATCTGCCATCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLLLYSR*YLPSCA
Trigger: AGCACAAGATGGCAGATACCACCTACTGTACAACAA...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTTTGTTGTACAGTAGGTaGTATCTGCCATCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCLLYSR*YLPSCA
Trigger: AGCACAAGATGGCAGATACCACCTACTGTACAACAA...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTTACAGTGTTAACATaGCCTGGTGAGAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYFTVLT*PGESRE
Trigger: TTCTCTACTCTCACCAGGCCATGTTAACACTGTAAA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTAGTGCCAGTAAGTCCTaGAAGACAGTTGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTISASKS*KTVAEE
Trigger: TTCCTCTGCAACTGTCTTCCAGGACTTACTGGCACT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAAGTGCCAGTAAGTCCTaGAAGACAGTTGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTSASKS*KTVAEE
Trigger: TTCCTCTGCAACTGTCTTCCAGGACTTACTGGCACT...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAGCAGCAGGGTACATGTaGCATCTATCAATTCATCTC +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTAAGYM*HLSIHL
Trigger: GAGATGAATTGATAGATGTCACATGTACCCTGCTGC...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR TCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAATCAGGAAAACCAAATaGGAAGCCCCACATATAGAA +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLIRKTK*EAPHIE
Trigger: TTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGAT...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTAGAGGTGTGTGTGTGTaGACCAATCAGGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIRGVCV*TNQENQ
Trigger: TTGGTTTTCCTGATTGGTTCACACACACACACCTCT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTACACTCAACAAAACCATaGTGCCAAAGAAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLHSTKP*CQRKGH
Trigger: ATGTCCTTTTCTTTGGCATCATGGTTTTGTTGAGTG...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATCACTCAACAAAACCATaGTGCCAAAGAAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYHSTKP*CQRKGH
Trigger: ATGTCCTTTTCTTTGGCATCATGGTTTTGTTGAGTG...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTAGGAGAAGCATAAAATaGTATGTGCACAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCRRSIK*YVHRYR
Trigger: TCTGTACCTGTGCACATATCATTTTATGCTTCTCCT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAGGAGAAGCATAAAATaGTATGTGCACAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIRRSIK*YVHRYR
Trigger: TCTGTACCTGTGCACATATCATTTTATGCTTCTCCT...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGAATAAGAAATATGACTaGAAGTCTGGGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKNKKYD*KSGPRV
Trigger: AACTCTGGGCCCAGACTTTCAGTCATATTTCTTATT...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGATATCAGTCTCTCACTaGAGGATAAAATACCCTACG +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKISVSH*RIKYPT
Trigger: CGTAGGGTATTTTATCCTTCAGTGAGAGACTGATAT...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTAATATCAGTCTCTCACTaGAGGATAAAATACCCTACG +
Preference number: 4 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLISVSH*RIKYPT
Trigger: CGTAGGGTATTTTATCCTTCAGTGAGAGACTGATAT...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACATTTCTGTCTTCACCATaGACATGGCATATTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTFLSSP*TWHIAA
Trigger: GGCAGCAATATGCCATGTTCATGGTGAAGACAGAAA...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGCCTGAGATCCACAACTaGTTCATTGGTTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKPEIHN*FIGFLS
Trigger: AGACAGAAAACCAATGAATCAGTTGTGGATCTCAGG...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATCAAATTAACAGATGCTaGGACTACTGTATCATTCAC +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYQINRC*DYCIIH
Trigger: GTGAATGATACAGTAGTCTCAGCATCTGTTAATTTG...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTAGTTTCGGCTCTGTATaGAGGATCTGTCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTISFGSV*RICPLV
Trigger: TACTAGAGGACAGATCCTGCATACAGAGCCGAAACT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAGCAGACTAAACTACTaGCCTGTATTGTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVISRLNY*PVLFLA
Trigger: TGCTAAGAACAATACAGGGCAGTAGTTTAGTCTGCT...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTAGCAGACTAAACTACTaGCCTGTATTGTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCSRLNY*PVLFLA
Trigger: TGCTAAGAACAATACAGGGCAGTAGTTTAGTCTGCT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATACCTGCTCCAAATaGAAGATGATATTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRNTCSK*KMIFVR
Trigger: CCTTACAAATATCATCTTGCATTTGGAGCAGGTATT...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp GTGCTTCATATTCACCAATCATTTGTCCAATATATTTTTGGTGAGGAACACAGATTAATGTGGCACAGTTaGACGTCTCCAATTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VLHIHQSFVQYIFGEEHRLMWHS*TSPIVC
Trigger: GCACACAATTGGAGACGTGCAACTGTGCCACATTAA...TCTGTGTTCCTCACCAAAAATATATTGGACAAATGATTGGTGAATATGAAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGGTGAATCCATGTTTCTaGACTCTTTGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLVNPCF*TLWKLG
Trigger: ACCAAGTTTCCAAAGAGTCCAGAAACATGGATTCAC...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAAGGGTTTCATGTCCTaGGTAGGAATCAATAAGATC +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIKGFMS*VGINKI
Trigger: GATCTTATTGATTCCTACCCAGGACATGAAACCCTT...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGGATACGGCTATAATGTaGATACTTTGGTACCTCATC +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLDTAIM*ILWYLI
Trigger: GATGAGGTACCAAAGTATCCACATTATAGCCGTATC...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGACATATTTTAGTGGAATaGGCTGAACCACCCATGTCT +
Preference number: 4 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGHILVE*AEPPMS
Trigger: AGACATGGGTGGTTCAGCCCATTCCACTAAAATATG...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGGCAAGATAATCAGTaGAAGGTACACAAAGGCATG +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNRQDNQ*KVHKGM
Trigger: CATGCCTTTGTGTACCTTCCACTGATTATCTTGCCT...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGCAGAGCTGCATTTCTTaGCTGGGATTTAACAAGTTT +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKQSCIS*LGFNKF
Trigger: AAACTTGTTAAATCCCAGCCAAGAAATGCAGCTCTG...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTATTTACAGTGTTAACATaGCCTGGTGAGAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLFTVLT*PGESRE
Trigger: TTCTCTACTCTCACCAGGCCATGTTAACACTGTAAA...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTTCAGGGTTAGCTTTCTaGACAATAGAATCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCSGLAF*TIESSR
Trigger: TCTGGATGATTCTATTGTCCAGAAAGCTAACCCTGA...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCAAAATATGCCGCCTATaGCACCAAAGGGTTTCATGT +
Preference number: 4 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRKICRL*HQRVSC
Trigger: ACATGAAACCCTTTGGTGTCATAGGCGGCATATTTT...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGACAATACTTGATCAATaGACCTGTGCTCCATTTCTA +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKTILDQ*TCAPFL
Trigger: TAGAAATGGAGCACAGGTTCATTGATCAAGTATTGT...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATACAATACTTGATCAATaGACCTGTGCTCCATTTCTA +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYTILDQ*TCAPFL
Trigger: TAGAAATGGAGCACAGGTTCATTGATCAAGTATTGT...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACATTCACCTCTTTCATTaGCTCAAAGTAACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNIHLFH*LKVTSH
Trigger: ATGGCTGGTTACTTTGAGTCAATGAAAGAGGTGAAT...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAATCAGGAAAACCAAATaGGAAGCCCCACATATAGAA +
Preference number: 4 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGIRKTK*EAPHIE
Trigger: TTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGAT...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR TCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTTTGAAGACACACCCCTaGAGTAAGAAAGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTILKTHP*SKKGKV
Trigger: TACCTTTCCTTTCTTACTTCAGGGGTGTGTCTTCAA...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGAATAAGAAATATGACTaGAAGTCTGGGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKNKKYD*KSGPRV
Trigger: AACTCTGGGCCCAGACTTTCAGTCATATTTCTTATT...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGCAGCAAGATAAACAATaGGGCAGTCACAGAATATCT +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKQQDKQ*GSHRIS
Trigger: AGATATTCTGTGACTGCCTCATTGTTTATCTTGCTG...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGCAACTCTTGACTTGTTaGATTCCTACAATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKQLLTC*IPTMCK
Trigger: CTTGCACATTGTAGGAATTCAACAAGTCAAGAGTTG...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATAAATATACTCCTTGGTaGAAAGATGTCAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYKYTPW*KDVNSL
Trigger: GAGACTGTTGACATCTTTTCACCAAGGAGTATATTT...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TACCTATTCACATCATACAGTAACAAAATCCACATCTCACCACTGCATCCTCAAAAGAAATCGAAAGACTaGTATACAGCAAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: YLFTSYSNKIHISPLHPQKKSKD*YTARHQ
Trigger: TTGATGCCTTGCTGTATATCAGTCTTTCGATTTCTT...TTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGAATAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR TCA 90 bp GTGCTTCATATTCACCAATCATTTGTCCAATATATTTTTGGTGAGGAACACAGACTAAGTACCACTGTGTaGGGTGATTTTCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VLHIHQSFVQYIFGEEHRLSTTV*GDFPVF
Trigger: GAAAACAGGAAAATCACCTCACACAGTGGTACTTAG...TCTGTGTTCCTCACCAAAAATATATTGGACAAATGATTGGTGAATATGAAGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR GCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGTGGAAAACACCGTACTaGCAAAATAGGTACACTAAA +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLWKTPY*QNRYTK
Trigger: TTTAGTGTACCTATTTTGGCAGTACGGTGTTTTCCA...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCACAGTAGGTGGTATCTaGCATCTTGTGCTATGTAAG +
Preference number: 4 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRTVGGI*HLVLCK
Trigger: CTTACATAGCACAAGATGGCAGATACCACCTACTGT...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTATAATCAAAGCATCCTaGCTGCTTATATCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCIIKAS*LLISVS
Trigger: AGAGACTGATATAAGCAGGCAGGATGCTTTGATTAT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTAGGCTAATCTATTTGTaGACACACCATCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCRLIYL*THHPLN
Trigger: ATTTAGAGGATGGTGTGTGCACAAATAGATTAGCCT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTATCACTTGCAATGTTGTaGAACTGTATATCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLSLAML*NCISLP
Trigger: AGGCAAAGATATACAGTTGCACAACATTGCAAGTGA...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGGAGATGTGCTGTGAGTaGAAAATACACTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKEMCCE*KIHSNL
Trigger: TAGATTTGAGTGTATTTTGCACTCACAGCACATCTC...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTGAGATGTGCTGTGAGTaGAAAATACACTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIEMCCE*KIHSNL
Trigger: TAGATTTGAGTGTATTTTGCACTCACAGCACATCTC...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAGTGAATCCATGTTTCTaGACTCTTTGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGVNPCF*TLWKLG
Trigger: ACCAAGTTTCCAAAGAGTCCAGAAACATGGATTCAC...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTCTGTCTATCACAGTTTaGCTAATCAAAGACTTAAGC +
Preference number: 4 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCLSITV*LIKDLS
Trigger: GCTTAAGTCTTTGATTAGCCAAACTGTGATAGACAG...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTACTGTCTATCACAGTTTaGCTAATCAAAGACTTAAGC +
Preference number: 4 (lower is better)
Translates to: SAGRNYTIILSPQECQLLLSITV*LIKDLS
Trigger: GCTTAAGTCTTTGATTAGCCAAACTGTGATAGACAG...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTCTGACTTTGGTAATTaGGTAGAACATGCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKSDFGN*VEHARE
Trigger: TTCTCTAGCATGTTCTACCCAATTACCAAAGTCAGA...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGAGGACTGATGTGTTTTaGCATATACCAAATTTGAGG +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLRTDVF*HIPNLR
Trigger: CCTCAAATTTGGTATATGCCAAAACACATCAGTCCT...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTACTATTCCTTCCCTTaGCATTTGCCAGTAAACTTT +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKYYSFP*HLPVNF
Trigger: AAAGTTTACTGGCAAATGCCAAGGGAAGGAATAGTA...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATCTGAACATACCTAAGTaGCATACGATCTACTATGTA +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYLNIPK*HTIYYV
Trigger: TACATAGTAGATCGTATGCCACTTAGGTATGTTCAG...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGCATCTCTCCATTAAATaGGAGCTTATTACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKHLSIK*ELITEH
Trigger: ATGCTCTGTAATAAGCTCCCATTTAATGGAGAGATG...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTGCTATCTTGAAATATaGAATTCCTATCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVICYLEI*NSYPSL
Trigger: AAGGGAGGGATAGGAATTCCATATTTCAAGATAGCA...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTCAGGGTTAGCTTTCTaGACAATAGAATCATCCAGA +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNSGLAF*TIESSR
Trigger: TCTGGATGATTCTATTGTCCAGAAAGCTAACCCTGA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATTTTGCTGGAAGGTGTTaGTCTAATAAAGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYFAGRC*SNKENC
Trigger: GCAGTTTTCTTTATTAGACCAACACCTTCCAGCAAA...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTGTAGACTGTTACATTaGGGAAAAACAGATCAAGAA +
Preference number: 4 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYCRLLH*GKTDQE
Trigger: TTCTTGATCTGTTTTTCCCCAATGTAACAGTCTACA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTCAGCAAGATAAACAATaGGGCAGTCACAGAATATCT +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIQQDKQ*GSHRIS
Trigger: AGATATTCTGTGACTGCCTCATTGTTTATCTTGCTG...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACAACTCTTGACTTGTTaGATTCCTACAATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTQLLTC*IPTMCK
Trigger: CTTGCACATTGTAGGAATTCAACAAGTCAAGAGTTG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTGTCACACTTATTTCTaGCACTATTACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKCHTYF*HYYSHS
Trigger: AGAATGTGAGTAATAGTGGCAGAAATAAGTGTGACA...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTGTCACACTTATTTCTaGCACTATTACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVICHTYF*HYYSHS
Trigger: AGAATGTGAGTAATAGTGGCAGAAATAAGTGTGACA...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGTCATTCCCAATCCATTaGACTAATCCATCAATTTCT +
Preference number: 4 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLSFPIH*TNPSIS
Trigger: AGAAATTGATGGATTAGTGCAATGGATTGGGAATGA...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTTCATTCCCAATCCATTaGACTAATCCATCAATTTCT +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVISFPIH*TNPSIS
Trigger: AGAAATTGATGGATTAGTGCAATGGATTGGGAATGA...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTGCAACTGTATATCTTTaGCTTATGCATTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIATVYL*LMHLKL
Trigger: CAGTTTCAAATGCATAAGGCAAAGATATACAGTTGC...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCGTCAGAATTGAGATGTaGTGTGAGTGCAAAATACAC +
Preference number: 4 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRVRIEM*CECKIH
Trigger: GTGTATTTTGCACTCACAGCACATCTCAATTCTGAC...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAAAGGGTTTCATGTCCTaGGTAGGAATCAATAAGATC +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTKGFMS*VGINKI
Trigger: GATCTTATTGATTCCTACCCAGGACATGAAACCCTT...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGACTGATGTGTTTTaGCATATACCAAATTTGAGG +
Preference number: 4 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGRTDVF*HIPNLR
Trigger: CCTCAAATTTGGTATATGCCAAAACACATCAGTCCT...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACCAACAAGAATAAACTaGCATGACCTGAACATACCT +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTPTRIN*HDLNIP
Trigger: AGGTATGTTCAGGTCATGCCAGTTTATTCTTGTTGG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGACTATCTGGTTAATTTaGGCAAATGAGCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKTIWLI*ANEHLC
Trigger: ACACAAGTGCTCATTTGCCCAAATTAACCAGATAGT...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTAGCTGGCTTGGTACATaGTCACATAAGAACAAATCT +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTISWLGT*SHKNKS
Trigger: AGATTTGTTCTTATGTGACCATGTACCAAGCCAGCT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR TCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACAAATTAACAGATGCTaGGACTACTGTATCATTCAC +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTQINRC*DYCIIH
Trigger: GTGAATGATACAGTAGTCTCAGCATCTGTTAATTTG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACATCTCTGTTCAGCCATTaGTTTCTTGTTCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTSLFSH*FLVLYK
Trigger: TTTGTACAGAACAAGAAAGCAATGGCTGAACAGAGA...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR GCA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCGATCTACTATGTATTTaGTTTCCTGCAAACTACTGC +
Preference number: 4 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRDLLCI*FPANYC
Trigger: GCAGTAGTTTGCAGGAAAGCAAATACATAGTAGATC...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAATAATCAAAGCATCCTaGCTGCTTATATCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTIIKAS*LLISVS
Trigger: AGAGACTGATATAAGCAGGCAGGATGCTTTGATTAT...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAATGTGCAAGGCAGTATaGAATGTGTTGAACATATAT +
Preference number: 4 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGMCKAV*NVLNIY
Trigger: ATATATGTTCAACACATTGCATACTGCCTTGCACAT...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGAATACCTGCTCCAAATaGAAGATGATATTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKNTCSK*KMIFVR
Trigger: CCTTACAAATATCATCTTGCATTTGGAGCAGGTATT...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCCTGTCTATCACAGTTTaGCTAATCAAAGACTTAAGC +
Preference number: 4 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRLSITV*LIKDLS
Trigger: GCTTAAGTCTTTGATTAGCCAAACTGTGATAGACAG...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACTGAACATACCTAAGTaGCATACGATCTACTATGTA +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTLNIPK*HTIYYV
Trigger: TACATAGTAGATCGTATGCCACTTAGGTATGTTCAG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGCTATCTTGAAATATaGAATTCCTATCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRCYLEI*NSYPSL
Trigger: AAGGGAGGGATAGGAATTCCATATTTCAAGATAGCA...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACACACCTCTACCAAAGATaGAACTATAACACAGAAATC +
Preference number: 4 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTHLYQR*NYNTEI
Trigger: GATTTCTGTGTTATAGTTCCATCTTTGGTAGAGGTG...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATGAGCACTTGTGTTTaGTTTCTAACTTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIMSTCV*FLTLLE
Trigger: TTCCAGCAAAGTTAGAAACCAAACACAAGTGCTCAT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTGTAGACTGTTACATTaGGGAAAAACAGATCAAGAA +
Preference number: 4 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNCRLLH*GKTDQE
Trigger: TTCTTGATCTGTTTTTCCCCAATGTAACAGTCTACA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CCA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTACAATACTTTATAGCTaGCTTGGTACATGGTCACAT +
Preference number: 4 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTITILYS*LGTWSH
Trigger: ATGTGACCATGTACCAAGCCAGCTATAAAGTATTGT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 72 bp TGCTTCATATTCACCAATCATTTGTCCAATATATTTTaGGTGAGGAACACAGAGATTCAGGGAAGGTCTAAT +
Preference number: 4 (lower is better)
Translates to: CFIFTNHLSNIF*VRNTEIQGRSN
Trigger: ATTAGACCTTCCCTGAATCTCTGTGTTCCTCACCAAAAATATATTGGACAAATGATTGGTGAATATGAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
3UTR CAA 72 bp GCAACACATAAAGTGCTAGGGTTTGCACAGTTCTATTaGAGAAATTTATTCAAGACAAAAGGTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: ATHKVLGFAQFY*RNLFKTKGSVV
Trigger: AACAACTGAACCTTTTGTCTTGAATAAATTTCTCAAATAGAACTGTGCAAACCCTAGCACTTTATGTGTTGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
3UTR CAA 72 bp AAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTaGATGTTAGATCAATCACTGACTAAGCATTTATTG +
Preference number: 4 (lower is better)
Translates to: KMSTVSFLKAVS*MLDQSLTKHLL
Trigger: CAATAAATGCTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR GCA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCATGAACATGGCATATTaGTGCCCTTTAGGAATATAT +
Preference number: 4 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRMNMAY*CPLGIY
Trigger: ATATATTCCTAAAGGGCAGCAATATGCCATGTTCAT...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS GCA 90 bp TGTGGGTTCCTCCTGAAGGCGTTAGTGATGTCCTTCACAACCCGCTaGACCAGCACCGCCACCTCCTCGCTGGTCTCGGCCATGTTGGCG +
Preference number: 5 (lower is better)
Translates to: CGFLLKALVMSFTTR*TSTATSSLVSAMLA
Trigger: CGCCAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000472967.2
ENST00000474925.2
CDS-3UTR CAA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTATGCCACTGTTTCCCTTaGGACGCAGGTTTCAGGCTA +
Preference number: 5 (lower is better)
Translates to: QQPASKSCIKNLARRQCLCHCFP*DAGFRL
Trigger: TAGCCTGAAACCTGCGTCCAAAGGGAAACAGTGGCA...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS TCA 90 bp ACCTGGCTTGCTCCACGTTCCGACAGGTGGACAATACTTGATCAATaGACCTGTGCTCCATTTCTAGGCCTAGGGAGTCTGGAACTGGCG +
Preference number: 5 (lower is better)
Translates to: TWLAPRSDRWTILDQ*TCAPFLGLGSLELA
Trigger: CGCCAGTTCCAGACTCCCTAGGCCTAGAAATGGAGCACAGGTTCATTGATCAAGTATTGTCCACCTGTCGGAACGTGGAGCAAGCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS TCA 90 bp CTGGCAAACCTGGCTTGCTCCACGTTCCGACAGGTGGACAATACTTaGTCAATGAACCTGTGCTCCATTTCTAGGCCTAGGGAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: LANLACSTFRQVDNT*SMNLCSISRPRESG
Trigger: TCCAGACTCCCTAGGCCTAGAAATGGAGCACAGGTTCATTGATCAAGTATTGTCCACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS TCA 90 bp AGGGCAGACAGGCAGTCTGCCCAGGAGACAGTAATATTCCTACCTTaGCATCTAGCTTGGCCAAGTGCTGTAAAACCCAGATGCGATGGG +
Preference number: 5 (lower is better)
Translates to: RADRQSAQETVIFLP*HLAWPSAVKPRCDG
Trigger: CCCATCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGGTAGGAATATTACTGTCTCCTGGGCAGACTGCCTGTCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467511.1
CDS GCA 90 bp GATGCGATGGGACCAAGCATTATAGTTGCTTGGGTATCTCCCTGCTaGTTCACCACAGACCTCCATCTCTTCTTGTATGAGTCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: DAMGPSIIVAWVSPC*FTTDLHLFLYESLC
Trigger: GCACAGCGACTCATACAAGAAGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000467511.1
CDS GCA 90 bp CCAGATGCGATGGGACCAAGCATTATAGTTGCTTGGGTATCTCCCTaGTGCTTCACCACAGACCTCCATCTCTTCTTGTATGAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: PDAMGPSIIVAWVSP*CFTTDLHLFLYESL
Trigger: CAGCGACTCATACAAGAAGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000467511.1
CDS GCA 90 bp GGAATAGCCTTGCTTGCTAGAGTCATTCAGTCCATCTACTTCCATTaGTTGAGACAGCTGGGAGCCTGCTGGGATAAGGTGCAAGTCACT +
Preference number: 5 (lower is better)
Translates to: GIALLARVIQSIYFH*LRQLGACWDKVQVT
Trigger: AGTGACTTGCACCTTATCCCAGCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGACTGAATGACTCTAGCAAGCAAGGCTATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS CCA 90 bp TTCAACCAGGACTATGGGACTCCGGTTATACCTAGCTTCAGGACATaGGATCAGGCCAATTTCATCTATGTGTGGGTTCCTCCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: FNQDYGTPVIPSFRT*DQANFIYVWVPPEG
Trigger: GCCTTCAGGAGGAACCCACACATAGATGAAATTGGCCTGATCCCATGTCCTGAAGCTAGGTATAACCGGAGTCCCATAGTCCTGGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000474925.2
CDS-3UTR CAA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGCTGGTCTCGGCCATGTaGGCGGCGGCCGCGACAGTT +
Preference number: 5 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKLVSAM*AAAATV
Trigger: AACTGTCGCGGCCGCCGCCAACATGGCCGAGACCAG...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CAA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGAGGGTCTCAACTCTATaGCCCAGGCTGAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: RCSAGRNYTIILSPQECQRVSTL*PRLSTV
Trigger: CACTGTACTCAGCCTGGGCAATAGAGTTGAGACCCT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAAACTACTGCCCTGTATaGTTCTTAGCAAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: QQPASKSCIKNLARRQCLNYCPV*FLAKSL
Trigger: CAAACTCTTTGCTAAGAACAATACAGGGCAGTAGTT...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CACAGTTGCACGTCTCCAATTGTGTGCCACAAGGGAGCAAAACATCCAACGGCTTTTAATGTGGCACAGTaGCACGTCTCCAATTGTGTG +
Preference number: 5 (lower is better)
Translates to: HSCTSPIVCHKGAKHPTAFNVAQ*HVSNCV
Trigger: CACACAATTGGAGACGTGCAACTGTGCCACATTAAA...AGCCGTTGGATGTTTTGCTCCCTTGTGGCACACAATTGGAGACGTGCAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS GCA 90 bp AATTCACCTCTTTCATTGACTCAAAGTAACCAGCCATTTCCTGTATaGACTGGCAAACCTGGCTTGCTCCACGTTCCGACAGGTGGACAA +
Preference number: 5 (lower is better)
Translates to: NSPLSLTQSNQPFPV*TGKPGLLHVPTGGQ
Trigger: TTGTCCACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAGTGCATACAGGAAATGGCTGGTTACTTTGAGTCAATGAAAGAGGTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGCTGCTTCTTCATCTTTaGGAGGAACTAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RCSAGRNYTIILSPQECQLLLHL*EELGLA
Trigger: AGCCAGCCCTAGTTCCTCCAAAAGATGAAGAAGCAG...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCATCTACTTCCATTGCTaGAGACAGCTGGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: TRCSAGRNYTIILSPQECIYFHC*RQLGAC
Trigger: GCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGAT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CTAAATGGGATGCCTCCAACCCCCAAAACGTTAGTTGCCAGAAAGAAAGAACTATGTAGAAATCGGGTCTaGCTATGTGGCCCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LNGMPPTPKTLVARKKELCRNRV*LCGPGW
Trigger: CCAACCTGGGCCACATAGCAAGACCCGATTTCTACA...TAGTTCTTTCTTTCTGGCAACTAACGTTTTGGGGGTTGGAGGCATCCCATTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CAGCAGCCAGCATCGAAGTCATGCATCAAGAACCTCGCCAGGAGGCAATGCCTAGTATCCTTTGGGTATTaGCATTTTTGCTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: QQPASKSCIKNLARRQCLVSFGY*HFCSLL
Trigger: AAGTAGAGAGCAAAAATGCAAATACCCAAAGGATAC...TAGGCATTGCCTCCTGGCGAGGTTCTTGATGCATGACTTCGATGCTGGCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS GCA 90 bp GAGAATGAACTACTACCAGAAGATTTTAAGGGCAGACAGGCAGTCTaGCCAGGAGACAGTAATATTCCTACCTTGACATCTAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ENELLPEDFKGRQAV*PGDSNIPTLTSSLA
Trigger: GGCCAAGCTAGATGTCAAGGTAGGAATATTACTGTCTCCTGGGCAGACTGCCTGTCTGCCCTTAAAATCTTCTGGTAGTAGTTCATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467511.1
CDS-3UTR CAA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGCTCTCCACACCCAGTTaGTTTTCAACCAGGACTATG +
Preference number: 5 (lower is better)
Translates to: RCSAGRNYTIILSPQECQLSTPS*FSTRTM
Trigger: CATAGTCCTGGTTGAAAACAAACTGGGTGTGGAGAG...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CAA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGGTCCATCTACTTCCATaGCTTGAGACAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRVHLLP*LETAGS
Trigger: GCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGAC...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGACAGGTGGACAATACTaGATCAATGAACCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: RCSAGRNYTIILSPQECQTGGQY*INEPVL
Trigger: GAGCACAGGTTCATTGATCAAGTATTGTCCACCTGT...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAACTGGCAAACCTGGCTaGCTCCACGTTCCGACAGGT +
Preference number: 5 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGTGKPG*LHVPTG
Trigger: ACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAGT...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp TTCCATAAATGTGATCCACAAGAACTGGGACATGTTCCAAACTGCACTGTGTTAGTTGCACGTCTCCAATaGTGTGCCACAAGGGAGCAA +
Preference number: 5 (lower is better)
Translates to: FHKCDPQELGHVPNCTVLVARLQ*CATREQ
Trigger: TTGCTCCCTTGTGGCACACAATTGGAGACGTGCAAC...TAACACAGTGCAGTTTGGAACATGTCCCAGTTCTTGTGGATCACATTTATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CAA 90 bp CTATTCACATCATACAGTAACAAAATCCACATCTCACCACTGCATCCTCAACTCGGTGGCAGGTGTGTTTaGAGGCCAGCAGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: LFTSYSNKIHISPLHPQLGGRCV*RPAVFC
Trigger: ACAAAACACTGCTGGCCTCAAAACACACCTGCCACC...GAGTTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGATCTACTTCCATTGCTaGAGACAGCTGGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKIYFHC*RQLGAC
Trigger: GCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGAT...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTGTCCATCTACTTCCATaGCTTGAGACAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIVHLLP*LETAGS
Trigger: GCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGAC...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCACTGGCAAACCTGGCTaGCTCCACGTTCCGACAGGT +
Preference number: 5 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRTGKPG*LHVPTG
Trigger: ACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAGT...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTACTGGCAAACCTGGCTaGCTCCACGTTCCGACAGGT +
Preference number: 5 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTITGKPG*LHVPTG
Trigger: ACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAGT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGAGGGTCTCAACTCTATaGCCCAGGCTGAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLRVSTL*PRLSTV
Trigger: CACTGTACTCAGCCTGGGCAATAGAGTTGAGACCCT...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGGGGGTGAAGGTGGTGTaGGAGACAGTTACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKGVKVV*ETVTEL
Trigger: AAGCTCTGTAACTGTCTCCAACACCACCTTCACCCC...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTCAGGCTAATCTATTaGTGCACACACCATCCTCTA +
Preference number: 5 (lower is better)
Translates to: RCSAGRNYTIILSPQECQFRLIY*CTHHPL
Trigger: TAGAGGATGGTGTGTGCACAAATAGATTAGCCTGAA...CTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATTGCCACTGTTTCCCTTaGGACGCAGGTTTCAGGCTA +
Preference number: 5 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYCHCFP*DAGFRL
Trigger: TAGCCTGAAACCTGCGTCCAAAGGGAAACAGTGGCA...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS GCA 90 bp TCATCTTTTGGAGGAACTAGGGCTGGCTCACTTCTCAAAGGATTTTaGTCCATCACAGAACTGTCTATCACAGTTTGGCTAATCAAAGAC +
Preference number: 5 (lower is better)
Translates to: SSFGGTRAGSLLKGF*SITELSITVWLIKD
Trigger: GTCTTTGATTAGCCAAACTGTGATAGACAGTTCTGTGATGGAGCAAAATCCTTTGAGAAGTGAGCCAGCCCTAGTTCCTCCAAAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACGACCTCCATCTCTTCTaGTATGAGTCGCTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNDLHLF*YESLCP
Trigger: AGGGCACAGCGACTCATACAAGAAGAGATGGAGGTC...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGGTCCATCTACTTCCATaGCTTGAGACAGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKVHLLP*LETAGS
Trigger: GCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGAC...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACTGTAGAAATCGGGTCTaGCTATGTGGCCCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNCRNRV*LCGPGW
Trigger: CCAACCTGGGCCACATAGCAAGACCCGATTTCTACA...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGGGGGTGAAGGTGGTGTaGGAGACAGTTACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKGVKVV*ETVTEL
Trigger: AAGCTCTGTAACTGTCTCCAACACCACCTTCACCCC...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTGTGGCCAGTCAGAATaGAGATGTGCTGTGAGTGCA +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKCGQSE*RCAVSA
Trigger: TGCACTCACAGCACATCTCAATTCTGACTGGCCACA...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCATAATGCTTGGCAAATaGGAACAGGCTGATCCTACT +
Preference number: 5 (lower is better)
Translates to: TRCSAGRNYTIILSPQECIMLGK*EQADPT
Trigger: AGTAGGATCAGCCTGTTCCAATTTGCCAAGCATTAT...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTTTCCATAAATGTGATCCACAAGAACTGGGACATGTTCCAAACTGCACTGTGTGAGGCCAGCAGTGTTTaGTTTTTAATGTGGCACAGT +
Preference number: 5 (lower is better)
Translates to: VSINVIHKNWDMFQTALCEASSV*FLMWHS
Trigger: ACTGTGCCACATTAAAAACAAAACACTGCTGGCCTC...ACACAGTGCAGTTTGGAACATGTCCCAGTTCTTGTGGATCACATTTATGGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CAA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAGACCTCCATCTCTTCTaGTATGAGTCGCTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTDLHLF*YESLCP
Trigger: AGGGCACAGCGACTCATACAAGAAGAGATGGAGGTC...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGTCATCAAGAAGAATCTaGACATCTAGCTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRSSRRI*TSSLAK
Trigger: CTTGGCCAAGCTAGATGTCAAGATTCTTCTTGATGA...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACCTGCTTCTTCATCTTTaGGAGGAACTAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNLLLHL*EELGLA
Trigger: AGCCAGCCCTAGTTCCTCCAAAAGATGAAGAAGCAG...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGTTCCTGGGAATAGCCTaGCTTGCTAGAGTCATTCAG +
Preference number: 5 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLFLGIA*LARVIQ
Trigger: CTGAATGACTCTAGCAAGCAAGGCTATTCCCAGGAA...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTATTCCTGGGAATAGCCTaGCTTGCTAGAGTCATTCAG +
Preference number: 5 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLFLGIA*LARVIQ
Trigger: CTGAATGACTCTAGCAAGCAAGGCTATTCCCAGGAA...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTCCTGGGAATAGCCTaGCTTGCTAGAGTCATTCAG +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKFLGIA*LARVIQ
Trigger: CTGAATGACTCTAGCAAGCAAGGCTATTCCCAGGAA...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGTCCTTCCCTTGGCATTaGCCAGTAAACTTTAACAGT +
Preference number: 5 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRSFPWH*PVNFNS
Trigger: ACTGTTAAAGTTTACTGGCAAATGCCAAGGGAAGGA...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGACAGGCAAAGCATTGTaGTCACACTTATTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRTGKAL*SHLFLP
Trigger: TGGCAGAAATAAGTGTGACAACAATGCTTTGCCTGT...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGCTCTGGGGTACTAACTaGAACTCCCAGAAACCCATA +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKLWGTN*NSQKPI
Trigger: TATGGGTTTCTGGGAGTTCAAGTTAGTACCCCAGAG...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTACTCTGGGGTACTAACTaGAACTCCCAGAAACCCATA +
Preference number: 5 (lower is better)
Translates to: SAGRNYTIILSPQECQLLLWGTN*NSQKPI
Trigger: TATGGGTTTCTGGGAGTTCAAGTTAGTACCCCAGAG...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGTGTGGCCAGTCAGAATaGAGATGTGCTGTGAGTGCA +
Preference number: 5 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKCGQSE*RCAVSA
Trigger: TGCACTCACAGCACATCTCAATTCTGACTGGCCACA...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS CCA 90 bp AAGGTAGAAAATATGCCGCCTATGACACCAAAGGGTTTCATGTCCTaGGTAGGAATCAATAAGATCAGTGCTGAATTCAACTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: KVENMPPMTPKGFMS*VGINKISAEFNFFF
Trigger: GAAGAAGAAGTTGAATTCAGCACTGATCTTATTGATTCCTACCCAGGACATGAAACCCTTTGGTGTCATAGGCGGCATATTTTCTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGCTGTACAAAAGGAGCTaGTTGTGGACATATGGTAAA +
Preference number: 5 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRLYKRS*LWTYGK
Trigger: TTTACCATATGTCCACAACAAGCTCCTTTTGTACAG...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CAA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAGGACTCTTTGGAAACTaGGTTAAGGCGAGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGGLFGN*VKASFP
Trigger: GGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCC...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAGTTCCCAAGTTTCCTTaGGTCACAAAGGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGVPKFP*VTKEGK
Trigger: CTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAAC...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAAGCATTATAGTTGCTaGGGTATCTCCCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: FSRKELYDYFIPTGMPVIKHYSC*GISLLL
Trigger: AAGCAGCAGGGAGATACCCAAGCAACTATAATGCTT...AATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp ATACTCCTTGGTGAAAAGATGTCAACAGTCTCCTTTCTGAAAGCTGTTAGTTTGAAGCATTATAGTTGCTaGGGTATCTCCCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: ILLGEKMSTVSFLKAVSLKHYSC*GISLLL
Trigger: AAGCAGCAGGGAGATACCCAAGCAACTATAATGCTT...CAAACTAACAGCTTTCAGAAAGGAGACTGTTGACATCTTTTCACCAAGGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTCTGCTTCTTCATCTTTaGGAGGAACTAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTILLLHL*EELGLA
Trigger: AGCCAGCCCTAGTTCCTCCAAAAGATGAAGAAGCAG...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp ACTAAGGTAGGGATTATTAGATTGTTGTACAGTAGGTGGTATCTGCCATCTTGTACAGGTGGACAATACTaGATCAATGAACCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: TKVGIIRLLYSRWYLPSCTGGQY*INEPVL
Trigger: GAGCACAGGTTCATTGATCAAGTATTGTCCACCTGT...ACAAGATGGCAGATACCACCTACTGTACAACAATCTAATAATCCCTACCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTCCTTCCCTTGGCATTaGCCAGTAAACTTTAACAGT +
Preference number: 5 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYSFPWH*PVNFNS
Trigger: ACTGTTAAAGTTTACTGGCAAATGCCAAGGGAAGGA...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGGGGATTATTAGATTGTaGTACAGTAGGTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRGIIRL*YSRWYL
Trigger: CAGATACCACCTACTGTACAACAATCTAATAATCCC...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp ACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCTGAAAGCTGTTAGTTaGATGTTAGATCAATCACTG +
Preference number: 5 (lower is better)
Translates to: TRCSAGRNYTIILSPQECLKAVS*MLDQSL
Trigger: CAGTGATTGATCTAACATCAAACTAACAGCTTTCAG...GCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACATCTACTTCCATTGCTaGAGACAGCTGGGAGCCATT +
Preference number: 5 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNIYFHC*RQLGAI
Trigger: AATGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGAT...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415701.6
CDS-3UTR CAA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGTATGGTAAAAGGAACTaGACACACCAGCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKYGKRN*THQLST
Trigger: TGTGGAGAGCTGGTGTGTCAAGTTCCTTTTACCATA...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CAA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTGGACTCTTTGGAAACTaGGTTAAGGCGAGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIGLFGN*VKASFP
Trigger: GGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCC...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGATGTTTCTGGACTCTTaGGAAACTTGGTTAAGGCGA +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKMFLDS*ETWLRR
Trigger: TCGCCTTAACCAAGTTTCCAAAGAGTCCAGAAACAT...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTAATGTTTCTGGACTCTTaGGAAACTTGGTTAAGGCGA +
Preference number: 5 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLMFLDS*ETWLRR
Trigger: TCGCCTTAACCAAGTTTCCAAAGAGTCCAGAAACAT...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCGTTCCCAAGTTTCCTTaGGTCACAAAGGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRVPKFP*VTKEGK
Trigger: CTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAAC...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACATCTTGACATCTAGCTaGGCCAAGTGCTGTAAAACC +
Preference number: 5 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNILTSS*AKCCKT
Trigger: GGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGAT...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAATCTTGACATCTAGCTaGGCCAAGTGCTGTAAAACC +
Preference number: 5 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGILTSS*AKCCKT
Trigger: GGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGAT...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTCATCAAGAAGAATCTaGACATCTAGCTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKSSRRI*TSSLAK
Trigger: CTTGGCCAAGCTAGATGTCAAGATTCTTCTTGATGA...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGGTAGGGATTATTAGATaGTTGTACAGTAGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRVGIIR*LYSRWY
Trigger: ATACCACCTACTGTACAACAATCTAATAATCCCTAC...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATGCAGTATGCAATGTGTaGAACATATATGAGGTCTAC +
Preference number: 5 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYAVCNV*NIYEVY
Trigger: GTAGACCTCATATATGTTCAACACATTGCATACTGC...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTAGTTTGGTTTCTAACTTaGCTGGAAGGTGTTGGTCTA +
Preference number: 5 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLVWFLT*LEGVGL
Trigger: TAGACCAACACCTTCCAGCAAAGTTAGAAACCAAAC...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGCTGAAAGCTGTTAGTTaGATGTTAGATCAATCACTG +
Preference number: 5 (lower is better)
Translates to: LRLAVQQEGTIRLFYPHRLKAVS*MLDQSL
Trigger: CAGTGATTGATCTAACATCAAACTAACAGCTTTCAG...CCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGATAATGCTTGGCAAATaGGAACAGGCTGATCCTACT +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKIMLGK*EQADPT
Trigger: AGTAGGATCAGCCTGTTCCAATTTGCCAAGCATTAT...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTACAGGTGGACAATACTaGATCAATGAACCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTITGGQY*INEPVL
Trigger: GAGCACAGGTTCATTGATCAAGTATTGTCCACCTGT...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATCGCCCATCTAGCCATTaGATTCTCAAAACAATTACA +
Preference number: 5 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYRPSSH*ILKTIT
Trigger: TGTAATTGTTTTGAGAATCAAATGGCTAGATGGGCG...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTTCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATAATTCAAAATATGCTTaGTACACAAAGGGCCATGGA +
Preference number: 5 (lower is better)
Translates to: VQQEGTIRLFYPHRNASYNSKYA*YTKGHG
Trigger: TCCATGGCCCTTTGTGTACAAAGCATATTTTGAATT...ATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTACGATCTACTATGTATTaGCTTTCCTGCAAACTACTG +
Preference number: 5 (lower is better)
Translates to: SAGRNYTIILSPQECQLLRSTMY*LSCKLL
Trigger: CAGTAGTTTGCAGGAAAGCAAATACATAGTAGATCG...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTAGTGGTATCTGCCATCTaGTGCTATGTAAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLVVSAI*CYVREN
Trigger: ATTTTCTCTTACATAGCACAAGATGGCAGATACCAC...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAGTGGTATCTGCCATCTaGTGCTATGTAAGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: SAGRNYTIILSPQECQLLVVSAI*CYVREN
Trigger: ATTTTCTCTTACATAGCACAAGATGGCAGATACCAC...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTATCCACAACTGATTCATaGGTTTTCTGTCTTCACCAT +
Preference number: 5 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLSTTDS*VFCLHH
Trigger: ATGGTGAAGACAGAAAACCAATGAATCAGTTGTGGA...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTATCCACAACTGATTCATaGGTTTTCTGTCTTCACCAT +
Preference number: 5 (lower is better)
Translates to: SAGRNYTIILSPQECQLLSTTDS*VFCLHH
Trigger: ATGGTGAAGACAGAAAACCAATGAATCAGTTGTGGA...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TACCTATTCACATCATACAGTAACAAAATCCACATCTCACCACTGCATCCTCAACACAGCCTCTTTATTTaGGGAGTAAATGGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: YLFTSYSNKIHISPLHPQHSLFI*GVNGLN
Trigger: ATTTAGCCCATTTACTCCCAAAATAAAGAGGCTGTG...TTGAGGATGCAGTGGTGAGATGTGGATTTTGTTACTGTATGATGTGAATAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472967.2
CDS-3UTR CAA 90 bp ACAGTCTCCTTTCTGAAAGCTGTTAGTTTGATGTTAGATCAATCACTGACTAAGTACAAAAGGAGCTTGTaGTGGACATATGGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: TVSFLKAVSLMLDQSLTKYKRSL*WTYGKR
Trigger: CCTTTTACCATATGTCCACAACAAGCTCCTTTTGTA...CTTAGTCAGTGATTGATCTAACATCAAACTAACAGCTTTCAGAAAGGAGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CAA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTCAGCCATTGCTTTCTaGTTCTGTACAAAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRSAIAF*FCTKGA
Trigger: AGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGA...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS-3UTR CAA 90 bp TCAGCAGGAAGGAACTATACGATTATTTTATCCCCACAGGAATGCCAGTTATTAACTGTCTATCACAGTTaGGCTAATCAAAGACTTAAG +
Preference number: 5 (lower is better)
Translates to: SAGRNYTIILSPQECQLLTVYHS*ANQRLK
Trigger: CTTAAGTCTTTGATTAGCCAAACTGTGATAGACAGT...TAATAACTGGCATTCCTGTGGGGATAAAATAATCGTATAGTTCCTTCCTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACCGCCCATCTAGCCATTaGATTCTCAAAACAATTACA +
Preference number: 5 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNRPSSH*ILKTIT
Trigger: TGTAATTGTTTTGAGAATCAAATGGCTAGATGGGCG...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAACAGGCAAAGCATTGTaGTCACACTTATTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTTGKAL*SHLFLP
Trigger: TGGCAGAAATAAGTGTGACAACAATGCTTTGCCTGT...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATCAGGAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGAATTCAAAATATGCTTaGTACACAAAGGGCCATGGA +
Preference number: 5 (lower is better)
Translates to: NQENQMRSPTYRNTKGEKNSKYA*YTKGHG
Trigger: TCCATGGCCCTTTGTGTACAAAGCATATTTTGAATT...CTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTCCTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TTAGCCAAACTTATCTTTAATGGCCAATGCCTGACCCTGCACCATAGATTATATGTATCCTTTGGGTATTaGCATTTTTGCTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: LAKLIFNGQCLTLHHRLYVSFGY*HFCSLL
Trigger: AAGTAGAGAGCAAAAATGCAAATACCCAAAGGATAC...ATATAATCTATGGTGCAGGGTCAGGCATTGGCCATTAAAGATAAGTTTGGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAGGGATTATTAGATTGTaGTACAGTAGGTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGGIIRL*YSRWYL
Trigger: CAGATACCACCTACTGTACAACAATCTAATAATCCC...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTTCAGGCTAATCTATTaGTGCACACACCATCCTCTA +
Preference number: 5 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRFRLIY*CTHHPL
Trigger: TAGAGGATGGTGTGTGCACAAATAGATTAGCCTGAA...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACCATGAACATGGCATATaGCTGCCCTTTAGGAATATA +
Preference number: 5 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNHEHGI*LPFRNI
Trigger: TATATTCCTAAAGGGCAGCAATATGCCATGTTCATG...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAACTACTGCCCTGTATaGTTCTTAGCAAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGNYCPV*FLAKSL
Trigger: CAAACTCTTTGCTAAGAACAATACAGGGCAGTAGTT...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GTAGTATTCTTAATCCACAGTAGGATGACCCACTGTTCTTCCAGTGAAAGTTTATCAACTCTTGACTTGTaGAATTCCTACAATGTGCAA +
Preference number: 5 (lower is better)
Translates to: VVFLIHSRMTHCSSSESLSTLDL*NSYNVQ
Trigger: TTGCACATTGTAGGAATTCAACAAGTCAAGAGTTGA...TAAACTTTCACTGGAAGAACAGTGGGTCATCCTACTGTGGATTAAGAATACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp TCCCAATCCATTGCACTAATCCATCAATTTCTCAATCATCACTCATTCTTAACAGTTTGGTTTCTAACTTaGCTGGAAGGTGTTGGTCTA +
Preference number: 5 (lower is better)
Translates to: SQSIALIHQFLNHHSFLTVWFLT*LEGVGL
Trigger: TAGACCAACACCTTCCAGCAAAGTTAGAAACCAAAC...TGTTAAGAATGAGTGATGATTGAGAAATTGATGGATTAGTGCAATGGATTGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp GAAAACCAAATGAGAAGCCCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAATGAGCACTTGTGTTaGGTTTCTAACTTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: ENQMRSPTYRNTKGEKLNNEHLC*VSNFAG
Trigger: TCCAGCAAAGTTAGAAACCAAACACAAGTGCTCATT...GTTTAACTTCTCACCCTTTGTATTTCTATATGTGGGGCTTCTCATTTGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAACTGTCTATCACAGTTaGGCTAATCAAAGACTTAAG +
Preference number: 5 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGTVYHS*ANQRLK
Trigger: CTTAAGTCTTTGATTAGCCAAACTGTGATAGACAGT...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCATACTATTCCTTCCCTaGGCATTTGCCAGTAAACTT +
Preference number: 5 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRILFLP*AFASKL
Trigger: AAGTTTACTGGCAAATGCCAAGGGAAGGAATAGTAT...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCCGATCTACTATGTATTaGCTTTCCTGCAAACTACTG +
Preference number: 5 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRRSTMY*LSCKLL
Trigger: CAGTAGTTTGCAGGAAAGCAAATACATAGTAGATCG...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTCATGAACATGGCATATaGCTGCCCTTTAGGAATATA +
Preference number: 5 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIHEHGI*LPFRNI
Trigger: TATATTCCTAAAGGGCAGCAATATGCCATGTTCATG...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTGCAGTATGCAATGTGTaGAACATATATGAGGTCTAC +
Preference number: 5 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIAVCNV*NIYEVY
Trigger: GTAGACCTCATATATGTTCAACACATTGCATACTGC...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp AATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGATCAACTCTTGACTTGTaGAATTCCTACAATGTGCAA +
Preference number: 5 (lower is better)
Translates to: NTKGEKLNRKFKTRCSAGSTLDL*NSYNVQ
Trigger: TTGCACATTGTAGGAATTCAACAAGTCAAGAGTTGA...TCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS-3UTR CAA 90 bp CCCACATATAGAAATACAAAGGGTGAGAAGTTAAACAGAAAATTTAAGACTCGCACTGTCTATCACAGTTaGGCTAATCAAAGACTTAAG +
Preference number: 5 (lower is better)
Translates to: PTYRNTKGEKLNRKFKTRTVYHS*ANQRLK
Trigger: CTTAAGTCTTTGATTAGCCAAACTGTGATAGACAGT...GCGAGTCTTAAATTTTCTGTTTAACTTCTCACCCTTTGTATTTCTATATGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS-3UTR CAA 90 bp AAGTTAAACAGAAAATTTAAGACTCGCTGTTCAGCAGGAAGGAACTATACGATTGTAGGGATTATTAGATaGTTGTACAGTAGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: KLNRKFKTRCSAGRNYTIVGIIR*LYSRWY
Trigger: ATACCACCTACTGTACAACAATCTAATAATCCCTAC...AATCGTATAGTTCCTTCCTGCTGAACAGCGAGTCTTAAATTTTCTGTTTAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000377200.9
CDS CAA 90 bp ACCCGCTGCACCAGCACCGCCACCTCCTCGCTGGTCTCGGCCATGTaGGCGGCGGCCGCGACAGTTCGGGCGCGCCTCCGCGTGAGCCGG +
Preference number: 6 (lower is better)
Translates to: TRCTSTATSSLVSAM*AAAATVRARLRVSR
Trigger: CCGGCTCACGCGGAGGCGCGCCCGAACTGTCGCGGCCGCCGCCAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS CCA 72 bp CCAGCACCGCCACCTCCTCGCTGGTCTCGGCCATGTTaGCGGCGGCCGCGACAGTTCGGGCGCGCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: PAPPPPRWSRPC*RRPRQFGRASA
Trigger: CGCGGAGGCGCGCCCGAACTGTCGCGGCCGCCGCCAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS CAA 72 bp ACCAGCACCGCCACCTCCTCGCTGGTCTCGGCCATGTaGGCGGCGGCCGCGACAGTTCGGGCGCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: TSTATSSLVSAM*AAAATVRARLR
Trigger: GCGGAGGCGCGCCCGAACTGTCGCGGCCGCCGCCAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS CCA 72 bp TCACAACCCGCTGCACCAGCACCGCCACCTCCTCGCTaGTCTCGGCCATGTTGGCGGCGGCCGCGACAGTTC +
Preference number: 6 (lower is better)
Translates to: SQPAAPAPPPPR*SRPCWRRPRQF
Trigger: GAACTGTCGCGGCCGCCGCCAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340434.5
CDS GCA 72 bp CTCCTGAAGGCGTTAGTGATGTCCTTCACAACCCGCTaGACCAGCACCGCCACCTCCTCGCTGGTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: LLKALVMSFTTR*TSTATSSLVSA
Trigger: GGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000472967.2
ENST00000474925.2
CDS TCA 72 bp GCTCCACGTTCCGACAGGTGGACAATACTTGATCAATaGACCTGTGCTCCATTTCTAGGCCTAGGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: APRSDRWTILDQ*TCAPFLGLGSL
Trigger: CAGACTCCCTAGGCCTAGAAATGGAGCACAGGTTCATTGATCAAGTATTGTCCACCTGTCGGAACGTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS TCA 72 bp CTGGCTTGCTCCACGTTCCGACAGGTGGACAATACTTaGTCAATGAACCTGTGCTCCATTTCTAGGCCTAGG +
Preference number: 6 (lower is better)
Translates to: LACSTFRQVDNT*SMNLCSISRPR
Trigger: CCTAGGCCTAGAAATGGAGCACAGGTTCATTGATCAAGTATTGTCCACCTGTCGGAACGTGGAGCAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CCA 72 bp AACCCAGATGCGATGGGACCAAGCATTATAGTTGCTTaGGTATCTCCCTGCTGCTTCACCACAGACCTCCAT +
Preference number: 6 (lower is better)
Translates to: NPDAMGPSIIVA*VSPCCFTTDLH
Trigger: ATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000467511.1
CDS CAA 72 bp AAACCCAGATGCGATGGGACCAAGCATTATAGTTGCTaGGGTATCTCCCTGCTGCTTCACCACAGACCTCCA +
Preference number: 6 (lower is better)
Translates to: KPRCDGTKHYSC*GISLLLHHRPP
Trigger: TGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATCTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000467511.1
CDS CAA 72 bp AACCAGCCATTTCCTGTATGCACTGGCAAACCTGGCTaGCTCCACGTTCCGACAGGTGGACAATACTTGATC +
Preference number: 6 (lower is better)
Translates to: NQPFPVCTGKPG*LHVPTGGQYLI
Trigger: GATCAAGTATTGTCCACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAGTGCATACAGGAAATGGCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CAA 90 bp TGGAACTGGCGTCCGCTTCAGGCGTTTGGTTTCCTGGGAATAGCCTaGCTTGCTAGAGTCATTCAGTCCATCTACTTCCATTGCTTGAGA +
Preference number: 6 (lower is better)
Translates to: WNWRPLQAFGFLGIA*LARVIQSIYFHCLR
Trigger: TCTCAAGCAATGGAAGTAGATGGACTGAATGACTCTAGCAAGCAAGGCTATTCCCAGGAAACCAAACGCCTGAAGCGGACGCCAGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS TCA 72 bp TTGCTAGAGTCATTCAGTCCATCTACTTCCATTGCTTaGGACAGCTGGGAGCCTGCTGGGATAAGGTGCAAG +
Preference number: 6 (lower is better)
Translates to: LLESFSPSTSIA*DSWEPAGIRCK
Trigger: CTTGCACCTTATCCCAGCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGACTGAATGACTCTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS GCA 72 bp GTAAAACCCAGATGCGATGGGACCAAGCATTATAGTTaGTTGGGTATCTCCCTGCTGCTTCACCACAGACCT +
Preference number: 6 (lower is better)
Translates to: VKPRCDGTKHYS*LGISLLLHHRP
Trigger: AGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATCTGGGTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000467511.1
CDS GCA 72 bp TTGCTTGCTAGAGTCATTCAGTCCATCTACTTCCATTaGTTGAGACAGCTGGGAGCCTGCTGGGATAAGGTG +
Preference number: 6 (lower is better)
Translates to: LLARVIQSIYFH*LRQLGACWDKV
Trigger: CACCTTATCCCAGCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGACTGAATGACTCTAGCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS GCA 72 bp CCTCCAGAGGTAGCAGCTGTTGCGATTCTCTCAAGTTaGCAGACCATCAGTTTCTCTACTCCTTCAAAGCTC +
Preference number: 6 (lower is better)
Translates to: PPEVAAVAILSS*QTISFSTPSKL
Trigger: GAGCTTTGAAGGAGTAGAGAAACTGATGGTCTGGCAACTTGAGAGAATCGCAACAGCTGCTACCTCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467511.1
CDS CAA 72 bp CGTCCGCTTCAGGCGTTTGGTTTCCTGGGAATAGCCTaGCTTGCTAGAGTCATTCAGTCCATCTACTTCCAT +
Preference number: 6 (lower is better)
Translates to: RPLQAFGFLGIA*LARVIQSIYFH
Trigger: ATGGAAGTAGATGGACTGAATGACTCTAGCAAGCAAGGCTATTCCCAGGAAACCAAACGCCTGAAGCGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CAA 72 bp CTTGCTAGAGTCATTCAGTCCATCTACTTCCATTGCTaGAGACAGCTGGGAGCCTGCTGGGATAAGGTGCAA +
Preference number: 6 (lower is better)
Translates to: LARVIQSIYFHC*RQLGACWDKVQ
Trigger: TTGCACCTTATCCCAGCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGACTGAATGACTCTAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS CAA 90 bp ATAGCCTTGCTTGCTAGAGTCATTCAGTCCATCTACTTCCATTGCTaGAGACAGCTGGGAGCCTGCTGGGATAAGGTGCAAGTCACTCAA +
Preference number: 6 (lower is better)
Translates to: IALLARVIQSIYFHC*RQLGACWDKVQVTQ
Trigger: TTGAGTGACTTGCACCTTATCCCAGCAGGCTCCCAGCTGTCTCAAGCAATGGAAGTAGATGGACTGAATGACTCTAGCAAGCAAGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377200.9
CDS CAA 90 bp GCAGTCTGCCCAGGAGACAGTAATATTCCTACCTTGACATCTAGCTaGGCCAAGTGCTGTAAAACCCAGATGCGATGGGACCAAGCATTA +
Preference number: 6 (lower is better)
Translates to: AVCPGDSNIPTLTSS*AKCCKTQMRWDQAL
Trigger: TAATGCTTGGTCCCATCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGGTAGGAATATTACTGTCTCCTGGGCAGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467511.1
CDS TCA 72 bp AGGCAGTCTGCCCAGGAGACAGTAATATTCCTACCTTaGCATCTAGCTTGGCCAAGTGCTGTAAAACCCAGA +
Preference number: 6 (lower is better)
Translates to: RQSAQETVIFLP*HLAWPSAVKPR
Trigger: TCTGGGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGGTAGGAATATTACTGTCTCCTGGGCAGACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467511.1
CDS GCA 72 bp GGACCAAGCATTATAGTTGCTTGGGTATCTCCCTGCTaGTTCACCACAGACCTCCATCTCTTCTTGTATGAG +
Preference number: 6 (lower is better)
Translates to: GPSIIVAWVSPC*FTTDLHLFLYE
Trigger: CTCATACAAGAAGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000467511.1
CDS GCA 72 bp CTTTCATTGACTCAAAGTAACCAGCCATTTCCTGTATaGACTGGCAAACCTGGCTTGCTCCACGTTCCGACA +
Preference number: 6 (lower is better)
Translates to: LSLTQSNQPFPV*TGKPGLLHVPT
Trigger: TGTCGGAACGTGGAGCAAGCCAGGTTTGCCAGTGCATACAGGAAATGGCTGGTTACTTTGAGTCAATGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CAA 72 bp CCAGGAGACAGTAATATTCCTACCTTGACATCTAGCTaGGCCAAGTGCTGTAAAACCCAGATGCGATGGGAC +
Preference number: 6 (lower is better)
Translates to: PGDSNIPTLTSS*AKCCKTQMRWD
Trigger: GTCCCATCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGGTAGGAATATTACTGTCTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467511.1
CDS CAA 90 bp ACTCAAAGTAACCAGCCATTTCCTGTATGCACTGGCAAACCTGGCTaGCTCCACGTTCCGACAGGTGGACAATACTTGATCAATGAACCT +
Preference number: 6 (lower is better)
Translates to: TQSNQPFPVCTGKPG*LHVPTGGQYLINEP
Trigger: AGGTTCATTGATCAAGTATTGTCCACCTGTCGGAACGTGGAGCAAGCCAGGTTTGCCAGTGCATACAGGAAATGGCTGGTTACTTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CAA 90 bp TTACAGGGTTCCTCCAGAGGTAGCAGCTGTTGCGATTCTCTCAAGTaGCCAGACCATCAGTTTCTCTACTCCTTCAAAGCTCTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: LQGSSRGSSCCDSLK*PDHQFLYSFKALLR
Trigger: TCTCAGAAGAGCTTTGAAGGAGTAGAGAAACTGATGGTCTGGCAACTTGAGAGAATCGCAACAGCTGCTACCTCTGGAGGAACCCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467511.1
CDS GCA 72 bp ATGGGACCAAGCATTATAGTTGCTTGGGTATCTCCCTaGTGCTTCACCACAGACCTCCATCTCTTCTTGTAT +
Preference number: 6 (lower is better)
Translates to: MGPSIIVAWVSP*CFTTDLHLFLY
Trigger: ATACAAGAAGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000467511.1
CDS CAA 72 bp AAAAGGAACTTGACACACCAGCTCTCCACACCCAGTTaGTTTTCAACCAGGACTATGGGACTCCGGTTATAC +
Preference number: 6 (lower is better)
Translates to: KRNLTHQLSTPS*FSTRTMGLRLY
Trigger: GTATAACCGGAGTCCCATAGTCCTGGTTGAAAACAAACTGGGTGTGGAGAGCTGGTGTGTCAAGTTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000474925.2
CDS CAA 72 bp GCACCCATCGCCTGTGAATCCATGTTTCTGGACTCTTaGGAAACTTGGTTAAGGCGAGTTTTCCCAGATGTA +
Preference number: 6 (lower is better)
Translates to: APIACESMFLDS*ETWLRRVFPDV
Trigger: TACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAAACATGGATTCACAGGCGATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000467511.1
CDS CAA 90 bp ACATATGGTAAAAGGAACTTGACACACCAGCTCTCCACACCCAGTTaGTTTTCAACCAGGACTATGGGACTCCGGTTATACCTAGCTTCA +
Preference number: 6 (lower is better)
Translates to: TYGKRNLTHQLSTPS*FSTRTMGLRLYLAS
Trigger: TGAAGCTAGGTATAACCGGAGTCCCATAGTCCTGGTTGAAAACAAACTGGGTGTGGAGAGCTGGTGTGTCAAGTTCCTTTTACCATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000474925.2
CDS GCA 72 bp CTACTACCAGAAGATTTTAAGGGCAGACAGGCAGTCTaGCCAGGAGACAGTAATATTCCTACCTTGACATCT +
Preference number: 6 (lower is better)
Translates to: LLPEDFKGRQAV*PGDSNIPTLTS
Trigger: AGATGTCAAGGTAGGAATATTACTGTCTCCTGGGCAGACTGCCTGTCTGCCCTTAAAATCTTCTGGTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467511.1
CDS CAA 90 bp TCTCTGTTCAGCCATTGCTTTCTTGTTCTGTACAAAAGGAGCTTGTaGTGGACATATGGTAAAAGGAACTTGACACACCAGCTCTCCACA +
Preference number: 6 (lower is better)
Translates to: SLFSHCFLVLYKRSL*WTYGKRNLTHQLST
Trigger: TGTGGAGAGCTGGTGTGTCAAGTTCCTTTTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGAACAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000474925.2
CDS CAA 90 bp TCATCTCTGTTCAGCCATTGCTTTCTTGTTCTGTACAAAAGGAGCTaGTTGTGGACATATGGTAAAAGGAACTTGACACACCAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSLFSHCFLVLYKRS*LWTYGKRNLTHQLS
Trigger: GGAGAGCTGGTGTGTCAAGTTCCTTTTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGAACAGAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000474925.2
CDS TCA 72 bp AAGGGGAACCTTGTAGGACTAATTCACCTCTTTCATTaGCTCAAAGTAACCAGCCATTTCCTGTATGCACTG +
Preference number: 6 (lower is better)
Translates to: KGNLVGLIHLFH*LKVTSHFLYAL
Trigger: CAGTGCATACAGGAAATGGCTGGTTACTTTGAGTCAATGAAAGAGGTGAATTAGTCCTACAAGGTTCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CCA 72 bp AATATGCCGCCTATGACACCAAAGGGTTTCATGTCCTaGGTAGGAATCAATAAGATCAGTGCTGAATTCAAC +
Preference number: 6 (lower is better)
Translates to: NMPPMTPKGFMS*VGINKISAEFN
Trigger: GTTGAATTCAGCACTGATCTTATTGATTCCTACCCAGGACATGAAACCCTTTGGTGTCATAGGCGGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CAA 90 bp ATTGCACTAAAAGGGGAACCTTGTAGGACTAATTCACCTCTTTCATaGACTCAAAGTAACCAGCCATTTCCTGTATGCACTGGCAAACCT +
Preference number: 6 (lower is better)
Translates to: IALKGEPCRTNSPLS*TQSNQPFPVCTGKP
Trigger: AGGTTTGCCAGTGCATACAGGAAATGGCTGGTTACTTTGAGTCAATGAAAGAGGTGAATTAGTCCTACAAGGTTCCCCTTTTAGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CAA 72 bp AGCCATTGCTTTCTTGTTCTGTACAAAAGGAGCTTGTaGTGGACATATGGTAAAAGGAACTTGACACACCAG +
Preference number: 6 (lower is better)
Translates to: SHCFLVLYKRSL*WTYGKRNLTHQ
Trigger: CTGGTGTGTCAAGTTCCTTTTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000474925.2
CDS CAA 72 bp AAAGGGGAACCTTGTAGGACTAATTCACCTCTTTCATaGACTCAAAGTAACCAGCCATTTCCTGTATGCACT +
Preference number: 6 (lower is better)
Translates to: KGEPCRTNSPLS*TQSNQPFPVCT
Trigger: AGTGCATACAGGAAATGGCTGGTTACTTTGAGTCAATGAAAGAGGTGAATTAGTCCTACAAGGTTCCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS CAA 90 bp ACTTCTCAAAGGATTTTGCTCCATCACAGAACTGTCTATCACAGTTaGGCTAATCAAAGACTTAAGCAAAAACTGGCGGTAGTGAAATCC +
Preference number: 6 (lower is better)
Translates to: TSQRILLHHRTVYHS*ANQRLKQKLAVVKS
Trigger: GGATTTCACTACCGCCAGTTTTTGCTTAAGTCTTTGATTAGCCAAACTGTGATAGACAGTTCTGTGATGGAGCAAAATCCTTTGAGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6
CDS GCA 72 bp CATGTGACATCTATCAATTCATCTCTGTTCAGCCATTaGTTTCTTGTTCTGTACAAAAGGAGCTTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: HVTSINSSLFSH*FLVLYKRSLLW
Trigger: CCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGAACAGAGATGAATTGATAGATGTCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000474925.2
CDS CAA 72 bp TTCAGCCATTGCTTTCTTGTTCTGTACAAAAGGAGCTaGTTGTGGACATATGGTAAAAGGAACTTGACACAC +
Preference number: 6 (lower is better)
Translates to: FSHCFLVLYKRS*LWTYGKRNLTH
Trigger: GTGTGTCAAGTTCCTTTTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340434.5
ENST00000474925.2
CDS CAA 72 bp AGGATTTTGCTCCATCACAGAACTGTCTATCACAGTTaGGCTAATCAAAGACTTAAGCAAAAACTGGCGGTA +
Preference number: 6 (lower is better)
Translates to: RILLHHRTVYHS*ANQRLKQKLAV
Trigger: TACCGCCAGTTTTTGCTTAAGTCTTTGATTAGCCAAACTGTGATAGACAGTTCTGTGATGGAGCAAAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340434.5
ENST00000377200.9
ENST00000415701.6