Pregenerated sensors for PSTK (Homo sapiens)
Ensembl gene IDs: ENSG00000179988Ensembl transcript IDs: ENST00000368887.7, ENST00000405485.2, ENST00000406217.8, ENST00000465232.5, ENST00000483455.5, ENST00000483755.5, ENST00000493461.1, ENST00000496079.1, ENST00000497219.5
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACCGGAGGAGTCTGGGAGCGTCGTCTCCGCTCTACCGTCTGCCCTaGGCGCACGCGCAGCGTCTCCGCCGCCTACCGGCGCAGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: DRRSLGASSPLYRLP*AHAQRLRRLPAQWR Trigger: CCTCCACTGCGCCGGTAGGCGGCGGAGACGCTGCGCGTGCGCGCAGGGCAGACGGTAGAGCGGAGACGACGCTCCCAGACTCCTCCGGTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS GCA 90 bp | GGGGAGACCGGAGGAGTCTGGGAGCGTCGTCTCCGCTCTACCGTCTaGCCTGCGCGCACGCGCAGCGTCTCCGCCGCCTACCGGCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GETGGVWERRLRSTV*PARTRSVSAAYRRS Trigger: ACTGCGCCGGTAGGCGGCGGAGACGCTGCGCGTGCGCGCAGGGCAGACGGTAGAGCGGAGACGACGCTCCCAGACTCCTCCGGTCTCCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS CCA 90 bp | CTGCCCTGCGCGCACGCGCAGCGTCTCCGCCGCCTACCGGCGCAGTaGAGGAACTGGCCTAGCTGGGTTTCCGTGCGGCCCCAGAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LPCAHAQRLRRLPAQ*RNWPSWVSVRPQRH Trigger: GTGCCTCTGGGGCCGCACGGAAACCCAGCTAGGCCAGTTCCTCCACTGCGCCGGTAGGCGGCGGAGACGCTGCGCGTGCGCGCAGGGCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS GCA 90 bp | CTGGGTTTCCGTGCGGCCCCAGAGGCACCTGCTCCACCGGTGCCCTaGTTGCTCCCAGGGACCAGAGGCTGGAGAGACCGCGGCGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: LGFRAAPEAPAPPVP*LLPGTRGWRDRGAA Trigger: CGCAGCGCCGCGGTCTCTCCAGCCTCTGGTCCCTGGGAGCAAGCAGGGCACCGGTGGAGCAGGTGCCTCTGGGGCCGCACGGAAACCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS CCA 90 bp | GCGCACGCGCAGCGTCTCCGCCGCCTACCGGCGCAGTGGAGGAACTaGCCTAGCTGGGTTTCCGTGCGGCCCCAGAGGCACCTGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: AHAQRLRRLPAQWRN*PSWVSVRPQRHLLH Trigger: GTGGAGCAGGTGCCTCTGGGGCCGCACGGAAACCCAGCTAGGCCAGTTCCTCCACTGCGCCGGTAGGCGGCGGAGACGCTGCGCGTGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS GCA 90 bp | CCTAGCTGGGTTTCCGTGCGGCCCCAGAGGCACCTGCTCCACCGGTaGCCTGCTTGCTCCCAGGGACCAGAGGCTGGAGAGACCGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: PSWVSVRPQRHLLHR*PACSQGPEAGETAA Trigger: CGCCGCGGTCTCTCCAGCCTCTGGTCCCTGGGAGCAAGCAGGGCACCGGTGGAGCAGGTGCCTCTGGGGCCGCACGGAAACCCAGCTAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS GCA 90 bp | GCCGCCTACCGGCGCAGTGGAGGAACTGGCCTAGCTGGGTTTCCGTaGGGCCCCAGAGGCACCTGCTCCACCGGTGCCCTGCTTGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: AAYRRSGGTGLAGFP*GPRGTCSTGALLAP Trigger: GGGAGCAAGCAGGGCACCGGTGGAGCAGGTGCCTCTGGGGCCGCACGGAAACCCAGCTAGGCCAGTTCCTCCACTGCGCCGGTAGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS GCA 90 bp | CTGCTGCAGCCGGTGGGCGAGGGCGCGCGCGAAAGTCGATTTTCCTaGCGCGGGGAGGCCACAGAGGACGCAGAGGCCTCGTTTCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: LLQPVGEGARESRFS*RGEATEDAEASFPR Trigger: CCGCGGAAACGAGGCCTCTGCGTCCTCTGTGGCCTCCCCGCGGCAGGAAAATCGACTTTCGCGCGCGCCCTCGCCCACCGGCTGCAGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 |
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| CDS CCA 90 bp | CAGCGTCTCCGCCGCCTACCGGCGCAGTGGAGGAACTGGCCTAGCTaGGTTTCCGTGCGGCCCCAGAGGCACCTGCTCCACCGGTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: QRLRRLPAQWRNWPS*VSVRPQRHLLHRCP Trigger: AGGGCACCGGTGGAGCAGGTGCCTCTGGGGCCGCACGGAAACCCAGCTAGGCCAGTTCCTCCACTGCGCCGGTAGGCGGCGGAGACGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS TCA 90 bp | GGACGCAGAGGCCTCGTTTCCGCGGCCCGTCGCTGCCGGTTCCTCTaGTGTTCTCGGCGGTCTTCATGCTGCCCGGGGAGACCGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GRRGLVSAARRCRFL*CSRRSSCCPGRPEE Trigger: CTCCTCCGGTCTCCCCGGGCAGCATGAAGACCGCCGAGAACATCAGAGGAACCGGCAGCGACGGGCCGCGGAAACGAGGCCTCTGCGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000406217.8 |
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| CDS GCA 90 bp | GGAGGAACTGGCCTAGCTGGGTTTCCGTGCGGCCCCAGAGGCACCTaGTCCACCGGTGCCCTGCTTGCTCCCAGGGACCAGAGGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GGTGLAGFPCGPRGT*STGALLAPRDQRLE Trigger: CTCCAGCCTCTGGTCCCTGGGAGCAAGCAGGGCACCGGTGGAGCAGGTGCCTCTGGGGCCGCACGGAAACCCAGCTAGGCCAGTTCCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS CCA 90 bp | ATGTTCTCGGCGGTCTTCATGCTGCCCGGGGAGACCGGAGGAGTCTaGGAGCGTCGTCTCCGCTCTACCGTCTGCCCTGCGCGCACGCGC | + |
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Preference number: 5 (lower is better) Translates to: MFSAVFMLPGETGGV*ERRLRSTVCPARTR Trigger: GCGCGTGCGCGCAGGGCAGACGGTAGAGCGGAGACGACGCTCCCAGACTCCTCCGGTCTCCCCGGGCAGCATGAAGACCGCCGAGAACAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000406217.8 |
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| CDS CCA 90 bp | GCACCTGCTCCACCGGTGCCCTGCTTGCTCCCAGGGACCAGAGGCTaGAGAGACCGCGGCGCTGCGTTCCTAGCTCCTGGACATTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: APAPPVPCLLPGTRG*RDRGAAFLAPGHSQ Trigger: TTGGGAATGTCCAGGAGCTAGGAACGCAGCGCCGCGGTCTCTCCAGCCTCTGGTCCCTGGGAGCAAGCAGGGCACCGGTGGAGCAGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS TCA 90 bp | ATGGCGCCGGTCGCGCTCTTGCCCCGGCGAGAAACGCGTCGGGCATaGCGTCATCATACGCGACAACACCGATGGCCCAACCCTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: MAPVALLPRRETRRA*RHHTRQHRWPNPAP Trigger: AGGAGCAGGGTTGGGCCATCGGTGTTGTCGCGTATGATGACGTCATGCCCGACGCGTTTCTCGCCGGGGCAAGAGCGCGACCGGCGCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 |
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| CDS GCA 90 bp | GCCCTGCTTGCTCCCAGGGACCAGAGGCTGGAGAGACCGCGGCGCTaGGTTCCTAGCTCCTGGACATTCCCAAGGGGTCCCAGAGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: ALLAPRDQRLERPRR*VPSSWTFPRGPRVR Trigger: CCTAACTCTGGGACCCCTTGGGAATGTCCAGGAGCTAGGAACGCAGCGCCGCGGTCTCTCCAGCCTCTGGTCCCTGGGAGCAAGCAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS TCA 90 bp | GAATCGCCGGTCGCGCTCTTGCCCCGGCGAGAAACGCGTCGGGCATaGCGTCATCATACGCGACAACACCGATGGCCCAACCCTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: ESPVALLPRRETRRA*RHHTRQHRWPNPAP Trigger: AGGAGCAGGGTTGGGCCATCGGTGTTGTCGCGTATGATGACGTCATGCCCGACGCGTTTCTCGCCGGGGCAAGAGCGCGACCGGCGATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483455.5 |
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| CDS GCA 90 bp | ACGTCATCATACGCGACAACACCGATGGCCCAACCCTGCTCCTGCTaGAGCCGGTGGGCGAGGGCGCGCGCGAAAGTCGATTTTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: TSSYATTPMAQPCSC*SRWARARAKVDFPA Trigger: GGCAGGAAAATCGACTTTCGCGCGCGCCCTCGCCCACCGGCTGCAGCAGGAGCAGGGTTGGGCCATCGGTGTTGTCGCGTATGATGACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 |
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| CDS GCA 90 bp | ATGACGTCATCATACGCGACAACACCGATGGCCCAACCCTGCTCCTaGTGCAGCCGGTGGGCGAGGGCGCGCGCGAAAGTCGATTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: MTSSYATTPMAQPCS*CSRWARARAKVDFP Trigger: AGGAAAATCGACTTTCGCGCGCGCCCTCGCCCACCGGCTGCAGCAGGAGCAGGGTTGGGCCATCGGTGTTGTCGCGTATGATGACGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 |
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| CDS GCA 90 bp | TCACAGACGTTCCACACCAGCTCAGCAACGGTCGTCCACGCCGCTTaGTGTTTCCCCACAGCCAACGTCGAAAACACCCTCGTGCCGGCG | + |
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Preference number: 5 (lower is better) Translates to: SQTFHTSSATVVHAA*CFPTANVENTLVPA Trigger: CGCCGGCACGAGGGTGTTTTCGACGTTGGCTGTGGGGAAACAGCAAGCGGCGTGGACGACCGTTGCTGAGCTGGTGTGGAACGTCTGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465232.5 |
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| CDS CCA 90 bp | AGGGACCAGAGGCTGGAGAGACCGCGGCGCTGCGTTCCTAGCTCCTaGACATTCCCAAGGGGTCCCAGAGTTAGGATTGATCTTCAAATA | + |
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Preference number: 5 (lower is better) Translates to: RDQRLERPRRCVPSS*TFPRGPRVRIDLQI Trigger: TATTTGAAGATCAATCCTAACTCTGGGACCCCTTGGGAATGTCCAGGAGCTAGGAACGCAGCGCCGCGGTCTCTCCAGCCTCTGGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS GCA 90 bp | AGGGGACTGAGACAGGAGAACTGCTTGAGCCCAGGAGGTCAAGCCTaGAGTGAGCTGATACCGATCCCTCGTGGACAATATGCAGGAACT | + |
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Preference number: 5 (lower is better) Translates to: RGLRQENCLSPGGQA*SELIPIPRGQYAGT Trigger: AGTTCCTGCATATTGTCCACGAGGGATCGGTATCAGCTCACTGCAGGCTTGACCTCCTGGGCTCAAGCAGTTCTCCTGTCTCAGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS TCA 90 bp | TCACTTCCAGGCTGGCCTCCGAAGCACATGCTGGACTCGGAATTGTaGGGCTGTTGTGTTCCCAAGCATTTTTCTCAGGGTTGGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SLPGWPPKHMLDSEL*GCCVPKHFSQGWAF Trigger: AAAAGCCCAACCCTGAGAAAAATGCTTGGGAACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCGGAGGCCAGCCTGGAAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 ENST00000483755.5 ENST00000496079.1 ENST00000497219.5 |
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| CDS TCA 90 bp | CTCAAGATGATCTTCCTCACACTGAAAAGAGCCCAGGTTCTGGAGTaGGTGCGATCTCACTGGGTCCAGATCTTGGCTCTGCCACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LKMIFLTLKRAQVLE*VRSHWVQILALPLP Trigger: AGGAAGTGGCAGAGCCAAGATCTGGACCCAGTGAGATCGCACTCACTCCAGAACCTGGGCTCTTTTCAGTGTGAGGAAGATCATCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS TCA 90 bp | ATTGGTCTTGTCTCAACCAGCAGAATCACTTCTCCTAGTGAGGAGTaGGGAACCGGTGAAGCAGGGGGCTTGAATTGTGCATGCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: IGLVSTSRITSPSEE*GTGEAGGLNCACQD Trigger: GTCCTGGCATGCACAATTCAAGCCCCCTGCTTCACCGGTTCCTCACTCCTCACTAGGAGAAGTGATTCTGCTGGTTGAGACAAGACCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000497219.5 |
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| CDS TCA 90 bp | GTGATAGTGACTGGCTTGGGAAAGCAGTGGGAGAGAGGAAGACACTaGGCCTTGTCCCTCGAATGCAGTGTAGCCCTCTTGGATATTGGT | + |
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Preference number: 5 (lower is better) Translates to: VIVTGLGKQWERGRH*ALSLECSVALLDIG Trigger: ACCAATATCCAAGAGGGCTACACTGCATTCGAGGGACAAGGCTCAGTGTCTTCCTCTCTCCCACTGCTTTCCCAAGCCAGTCACTATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497219.5 |
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| CDS GCA 90 bp | AGCAAGTACAAGGGCCCCAGGGCAAGAACATGCTCCTTGTGTTCGTaGAAGAGAAAGGCTGAAAAGAAGCCAGGAGGAGAGTGGCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: SKYKGPRARTCSLCS*KRKAEKKPGGEWQN Trigger: ATTCTGCCACTCTCCTCCTGGCTTCTTTTCAGCCTTTCTCTTGCACGAACACAAGGAGCATGTTCTTGCCCTGGGGCCCTTGTACTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS TCA 90 bp | GAGTGGAATACCTGGCCTCCGAAGCACATGCTGGACTCGGAATTGTaGGGCTGTTGTGTTCCCAAGCATTTTTCTCAGGGTTGGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: EWNTWPPKHMLDSEL*GCCVPKHFSQGWAF Trigger: AAAAGCCCAACCCTGAGAAAAATGCTTGGGAACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCGGAGGCCAGGTATTCCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000465232.5 ENST00000493461.1 |
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| CDS GCA 90 bp | TCATCTCACCCCGTGCTCAATGGCCTCTTCTCGATTCTGCAACACTaGAACCAGCCAACCTTTGCGCTTCTGCACTTGATGTGTTCATTG | + |
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Preference number: 5 (lower is better) Translates to: SSHPVLNGLFSILQH*NQPTFALLHLMCSL Trigger: CAATGAACACATCAAGTGCAGAAGCGCAAAGGTTGGCTGGTTGCAGTGTTGCAGAATCGAGAAGAGGCCATTGAGCACGGGGTGAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000497219.5 |
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| CDS CCA 90 bp | CTTCAAGTTGTGAGGAAGCACTTGTTCATCTCACCCCGTGCTCAATaGCCTCTTCTCGATTCTGCAACACTGCAACCAGCCAACCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: LQVVRKHLFISPRAQ*PLLDSATLQPANLC Trigger: GCAAAGGTTGGCTGGTTGCAGTGTTGCAGAATCGAGAAGAGGCCATTGAGCACGGGGTGAGATGAACAAGTGCTTCCTCACAACTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000497219.5 |
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| CDS CCA 90 bp | GAGCCCAGGTTCTGGAGTGAGTGCGATCTCACTGGGTCCAGATCTTaGCTCTGCCACTTCCTACCTGGGTATATTACTTTACTTATCTGG | + |
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Preference number: 5 (lower is better) Translates to: EPRFWSECDLTGSRS*LCHFLPGYITLLIW Trigger: CCAGATAAGTAAAGTAATATACCCAGGTAGGAAGTGGCAGAGCCAAGATCTGGACCCAGTGAGATCGCACTCACTCCAGAACCTGGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS TCA 90 bp | CCCCAGGGCAAGAACATGCTCCTTGTGTTCGTGCAAGAGAAAGGCTaGAAAGAAGCCAGGAGGAGAGTGGCAGAATATGAAGTTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: PQGKNMLLVFVQEKG*KEARRRVAEYEVGE Trigger: TTCTCCAACTTCATATTCTGCCACTCTCCTCCTGGCTTCTTTTCAGCCTTTCTCTTGCACGAACACAAGGAGCATGTTCTTGCCCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS GCA 90 bp | CTAGAAGCTTCAAGTTGTGAGGAAGCACTTGTTCATCTCACCCCGTaGTCAATGGCCTCTTCTCGATTCTGCAACACTGCAACCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LEASSCEEALVHLTP*SMASSRFCNTATSQ Trigger: TTGGCTGGTTGCAGTGTTGCAGAATCGAGAAGAGGCCATTGAGCACGGGGTGAGATGAACAAGTGCTTCCTCACAACTTGAAGCTTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000497219.5 |
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| CDS GCA 90 bp | GCAATTCATATTAGGCCACTAGGGTGGTCAGTCATCTGGCCTCACTaGCACCCTGCCCCATATGAAAATTTCAGCTCACAATACGGAACC | + |
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Preference number: 5 (lower is better) Translates to: AIHIRPLGWSVIWPH*HPAPYENFSSQYGT Trigger: GGTTCCGTATTGTGAGCTGAAATTTTCATATGGGGCAGGGTGGCAGTGAGGCCAGATGACTGACCACCCTAGTGGCCTAATATGAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000493461.1 ENST00000497219.5 |
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| CDS CCA 90 bp | GCTACAAGAGACCAAAGAATTGCAATTCATATTAGGCCACTAGGGTaGTCAGTCATCTGGCCTCACTGCCACCCTGCCCCATATGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: ATRDQRIAIHIRPLG*SVIWPHCHPAPYEN Trigger: ATTTTCATATGGGGCAGGGTGGCAGTGAGGCCAGATGACTGACCACCCTAGTGGCCTAATATGAATTGCAATTCTTTGGTCTCTTGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000493461.1 ENST00000497219.5 |
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| CDS CCA 90 bp | GTGCGATCTCACTGGGTCCAGATCTTGGCTCTGCCACTTCCTACCTaGGTATATTACTTTACTTATCTGGGCCTCAGTTATCCCATCTAT | + |
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Preference number: 5 (lower is better) Translates to: VRSHWVQILALPLPT*VYYFTYLGLSYPIY Trigger: ATAGATGGGATAACTGAGGCCCAGATAAGTAAAGTAATATACCCAGGTAGGAAGTGGCAGAGCCAAGATCTGGACCCAGTGAGATCGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS TCA 90 bp | AAATCTTCCCACATGGCTTCAGTCCTGTTGGGTGGGACAGACATCTaGCACCCATTAATGACAGCCATCAAGAAGTATTCCAGGTACTTC | + |
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Preference number: 5 (lower is better) Translates to: KSSHMASVLLGGTDI*HPLMTAIKKYSRYF Trigger: GAAGTACCTGGAATACTTCTTGATGGCTGTCATTAATGGGTGTCAGATGTCTGTCCCACCCAACAGGACTGAAGCCATGTGGGAAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000493461.1 ENST00000497219.5 |
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| CDS TCA 90 bp | TCTGCTTTGAGCTTGTTAAGTTCTTCTGCTAGAAGCTTCAAGTTGTaGGGAAGCACTTGTTCATCTCACCCCGTGCTCAATGGCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SALSLLSSSARSFKL*GSTCSSHPVLNGLF Trigger: GAAGAGGCCATTGAGCACGGGGTGAGATGAACAAGTGCTTCCTCACAACTTGAAGCTTCTAGCAGAAGAACTTAACAAGCTCAAAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000497219.5 |
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| CDS CCA 90 bp | CTTAAGGCTGAACCGGGGGCCACAAGAGCTCAACTTTATTCTCTATaGAAAGATGCCTGGTCTTTACTTTCTGGCTCCCGCTTATTTACT | + |
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Preference number: 5 (lower is better) Translates to: LKAEPGATRAQLYSL*KDAWSLLSGSRLFT Trigger: AGTAAATAAGCGGGAGCCAGAAAGTAAAGACCAGGCATCTTTCCATAGAGAATAAAGTTGAGCTCTTGTGGCCCCCGGTTCAGCCTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS TCA 90 bp | GCCTGGTCTTTACTTTCTGGCTCCCGCTTATTTACTGGATATGGATaGGCAAAGTTTCTCACTGAGCAAAGGTCCATGAAGGTTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AWSLLSGSRLFTGYG*AKFLTEQRSMKVSG Trigger: ACCTGAAACCTTCATGGACCTTTGCTCAGTGAGAAACTTTGCTCATCCATATCCAGTAAATAAGCGGGAGCCAGAAAGTAAAGACCAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS TCA 90 bp | TATGTATTGAACGTCTTATATGAAAAATACTGTACAACCACATGCTaGGCTGGGGGTGTAGCAAGATCCTTGCGTTTGCCAAGGCTGATA | + |
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Preference number: 5 (lower is better) Translates to: YVLNVLYEKYCTTTC*AGGVARSLRLPRLI Trigger: TATCAGCCTTGGCAAACGCAAGGATCTTGCTACACCCCCAGCTCAGCATGTGGTTGTACAGTATTTTTCATATAAGACGTTCAATACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CCA 90 bp | AGCTCAACTTTATTCTCTATGGAAAGATGCCTGGTCTTTACTTTCTaGCTCCCGCTTATTTACTGGATATGGATGAGCAAAGTTTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: SSTLFSMERCLVFTF*LPLIYWIWMSKVSH Trigger: GTGAGAAACTTTGCTCATCCATATCCAGTAAATAAGCGGGAGCCAGAAAGTAAAGACCAGGCATCTTTCCATAGAGAATAAAGTTGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS GCA 90 bp | AACAAACTGAGGGGAATAAACAGCTTGAGAATACAAGTAATCTTGTaGTGGTCAAGGGCTGTGGAGAATCCTGACATAGTTAAGAAATCT | + |
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Preference number: 5 (lower is better) Translates to: NKLRGINSLRIQVIL*WSRAVENPDIVKKS Trigger: AGATTTCTTAACTATGTCAGGATTCTCCACAGCCCTTGACCAGCACAAGATTACTTGTATTCTCAAGCTGTTTATTCCCCTCAGTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497219.5 |
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| CDS TCA 90 bp | ATCTATAAAATGGGGATAGTAGTTTCTACCCTTAAAGGGTGGTTGTaGGGACTGAATGAGACCATATATATAAAGTGTTCAGAACTGGGA | + |
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Preference number: 5 (lower is better) Translates to: IYKMGIVVSTLKGWL*GLNETIYIKCSELG Trigger: TCCCAGTTCTGAACACTTTATATATATGGTCTCATTCAGTCCTCACAACCACCCTTTAAGGGTAGAAACTACTATCCCCATTTTATAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS GCA 72 bp | AGTCTGGGAGCGTCGTCTCCGCTCTACCGTCTGCCCTaGGCGCACGCGCAGCGTCTCCGCCGCCTACCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SLGASSPLYRLP*AHAQRLRRLPA Trigger: CGCCGGTAGGCGGCGGAGACGCTGCGCGTGCGCGCAGGGCAGACGGTAGAGCGGAGACGACGCTCCCAGACT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS CCA 72 bp | GCGCACGCGCAGCGTCTCCGCCGCCTACCGGCGCAGTaGAGGAACTGGCCTAGCTGGGTTTCCGTGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AHAQRLRRLPAQ*RNWPSWVSVRP Trigger: GGGCCGCACGGAAACCCAGCTAGGCCAGTTCCTCCACTGCGCCGGTAGGCGGCGGAGACGCTGCGCGTGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368887.7 |
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| CDS GCA 72 bp | CGTGCGGCCCCAGAGGCACCTGCTCCACCGGTGCCCTaGTTGCTCCCAGGGACCAGAGGCTGGAGAGACCGC | + |
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Preference number: 6 (lower is better) Translates to: RAAPEAPAPPVP*LLPGTRGWRDR Trigger: GCGGTCTCTCCAGCCTCTGGTCCCTGGGAGCAAGCAGGGCACCGGTGGAGCAGGTGCCTCTGGGGCCGCACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
||
| CDS GCA 72 bp | GGAGGAGTCTGGGAGCGTCGTCTCCGCTCTACCGTCTaGCCTGCGCGCACGCGCAGCGTCTCCGCCGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: GGVWERRLRSTV*PARTRSVSAAY Trigger: GTAGGCGGCGGAGACGCTGCGCGTGCGCGCAGGGCAGACGGTAGAGCGGAGACGACGCTCCCAGACTCCTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368887.7 |
||
| CDS GCA 72 bp | CCGGTGGGCGAGGGCGCGCGCGAAAGTCGATTTTCCTaGCGCGGGGAGGCCACAGAGGACGCAGAGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PVGEGARESRFS*RGEATEDAEAS Trigger: CGAGGCCTCTGCGTCCTCTGTGGCCTCCCCGCGGCAGGAAAATCGACTTTCGCGCGCGCCCTCGCCCACCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 |
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| CDS CCA 72 bp | CGCCGCCTACCGGCGCAGTGGAGGAACTGGCCTAGCTaGGTTTCCGTGCGGCCCCAGAGGCACCTGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRLPAQWRNWPS*VSVRPQRHLLH Trigger: GTGGAGCAGGTGCCTCTGGGGCCGCACGGAAACCCAGCTAGGCCAGTTCCTCCACTGCGCCGGTAGGCGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
||
| CDS CCA 72 bp | CAGCGTCTCCGCCGCCTACCGGCGCAGTGGAGGAACTaGCCTAGCTGGGTTTCCGTGCGGCCCCAGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QRLRRLPAQWRN*PSWVSVRPQRH Trigger: GTGCCTCTGGGGCCGCACGGAAACCCAGCTAGGCCAGTTCCTCCACTGCGCCGGTAGGCGGCGGAGACGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
||
| CDS GCA 72 bp | GTTTCCGTGCGGCCCCAGAGGCACCTGCTCCACCGGTaGCCTGCTTGCTCCCAGGGACCAGAGGCTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSVRPQRHLLHR*PACSQGPEAGE Trigger: CTCTCCAGCCTCTGGTCCCTGGGAGCAAGCAGGGCACCGGTGGAGCAGGTGCCTCTGGGGCCGCACGGAAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
||
| CDS CCA 72 bp | CCACCGGTGCCCTGCTTGCTCCCAGGGACCAGAGGCTaGAGAGACCGCGGCGCTGCGTTCCTAGCTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPVPCLLPGTRG*RDRGAAFLAPG Trigger: TCCAGGAGCTAGGAACGCAGCGCCGCGGTCTCTCCAGCCTCTGGTCCCTGGGAGCAAGCAGGGCACCGGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368887.7 |
||
| CDS TCA 72 bp | GGCCTCGTTTCCGCGGCCCGTCGCTGCCGGTTCCTCTaGTGTTCTCGGCGGTCTTCATGCTGCCCGGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GLVSAARRCRFL*CSRRSSCCPGR Trigger: TCTCCCCGGGCAGCATGAAGACCGCCGAGAACATCAGAGGAACCGGCAGCGACGGGCCGCGGAAACGAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000406217.8 |
||
| CDS GCA 72 bp | TACGCGACAACACCGATGGCCCAACCCTGCTCCTGCTaGAGCCGGTGGGCGAGGGCGCGCGCGAAAGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: YATTPMAQPCSC*SRWARARAKVD Trigger: ATCGACTTTCGCGCGCGCCCTCGCCCACCGGCTGCAGCAGGAGCAGGGTTGGGCCATCGGTGTTGTCGCGTA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 |
||
| CDS GCA 72 bp | TCATACGCGACAACACCGATGGCCCAACCCTGCTCCTaGTGCAGCCGGTGGGCGAGGGCGCGCGCGAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SYATTPMAQPCS*CSRWARARAKV Trigger: GACTTTCGCGCGCGCCCTCGCCCACCGGCTGCAGCAGGAGCAGGGTTGGGCCATCGGTGTTGTCGCGTATGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 |
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| CDS GCA 72 bp | GCTGGCAAAAGCCCAACGAATCGCCGGTCGCGCTCTTaGCCCGGCGAGAAACGCGTCGGGCATGACGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: AGKSPTNRRSRS*PGEKRVGHDVI Trigger: GATGACGTCATGCCCGACGCGTTTCTCGCCGGGGCAAGAGCGCGACCGGCGATTCGTTGGGCTTTTGCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483455.5 |
||
| CDS TCA 72 bp | GTCGCGCTCTTGCCCCGGCGAGAAACGCGTCGGGCATaGCGTCATCATACGCGACAACACCGATGGCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VALLPRRETRRA*RHHTRQHRWPN Trigger: GTTGGGCCATCGGTGTTGTCGCGTATGATGACGTCATGCCCGACGCGTTTCTCGCCGGGGCAAGAGCGCGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 |
||
| CDS GCA 72 bp | AAGCAATTTCCATTGGGATGGCGCCGGTCGCGCTCTTaGCCCGGCGAGAAACGCGTCGGGCATGACGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: KQFPLGWRRSRS*PGEKRVGHDVI Trigger: GATGACGTCATGCCCGACGCGTTTCTCGCCGGGGCAAGAGCGCGACCGGCGCCATCCCAATGGAAATTGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 |
||
| CDS CAA 90 bp | ATCACAGACGTTCCACACCAGCTCAGCAACGGTCGTCCACGCCGCTaGCTGTTTCCCCACAGCCAACGTCGAAAACACCCTCGTGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ITDVPHQLSNGRPRR*LFPHSQRRKHPRAG Trigger: GCCGGCACGAGGGTGTTTTCGACGTTGGCTGTGGGGAAACAGCAAGCGGCGTGGACGACCGTTGCTGAGCTGGTGTGGAACGTCTGTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465232.5 |
||
| CDS GCA 72 bp | GAGTGCAGCGGCGTGATCTCTGCTCACTGCAAGCTCTaGTTCCCGGATTTGCGCCATTCTCCTGCCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ECSGVISAHCKL*FPDLRHSPASA Trigger: GGCTGAGGCAGGAGAATGGCGCAAATCCGGGAAGCAGAGCTTGCAGTGAGCAGAGATCACGCCGCTGCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
||
| CDS CCA 72 bp | AGGCTGGAGAGACCGCGGCGCTGCGTTCCTAGCTCCTaGACATTCCCAAGGGGTCCCAGAGTTAGGATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLERPRRCVPSS*TFPRGPRVRID Trigger: ATCAATCCTAACTCTGGGACCCCTTGGGAATGTCCAGGAGCTAGGAACGCAGCGCCGCGGTCTCTCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368887.7 |
||
| CDS TCA 72 bp | ACTGGCTTGGGAAAGCAGTGGGAGAGAGGAAGACACTaGGCCTTGTCCCTCGAATGCAGTGTAGCCCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TGLGKQWERGRH*ALSLECSVALL Trigger: CAAGAGGGCTACACTGCATTCGAGGGACAAGGCTCAGTGTCTTCCTCTCTCCCACTGCTTTCCCAAGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497219.5 |
||
| CDS CCA 72 bp | ATCAGTCACTTCCAGGCTGGCCTCCGAAGCACATGCTaGACTCGGAATTGTGAGGCTGTTGTGTTCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISHFQAGLRSTC*TRNCEAVVFPS Trigger: GCTTGGGAACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCGGAGGCCAGCCTGGAAGTGACTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 ENST00000483755.5 ENST00000496079.1 ENST00000497219.5 |
||
| CDS TCA 72 bp | GGCTGGCCTCCGAAGCACATGCTGGACTCGGAATTGTaGGGCTGTTGTGTTCCCAAGCATTTTTCTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GWPPKHMLDSEL*GCCVPKHFSQG Trigger: ACCCTGAGAAAAATGCTTGGGAACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCGGAGGCCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 ENST00000483755.5 ENST00000496079.1 ENST00000497219.5 |
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| CDS GCA 72 bp | CCCGTGCTCAATGGCCTCTTCTCGATTCTGCAACACTaGAACCAGCCAACCTTTGCGCTTCTGCACTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: PVLNGLFSILQH*NQPTFALLHLM Trigger: CATCAAGTGCAGAAGCGCAAAGGTTGGCTGGTTGCAGTGTTGCAGAATCGAGAAGAGGCCATTGAGCACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000497219.5 |
||
| CDS CCA 72 bp | GTGAGGAAGCACTTGTTCATCTCACCCCGTGCTCAATaGCCTCTTCTCGATTCTGCAACACTGCAACCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRKHLFISPRAQ*PLLDSATLQPA Trigger: GGCTGGTTGCAGTGTTGCAGAATCGAGAAGAGGCCATTGAGCACGGGGTGAGATGAACAAGTGCTTCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000497219.5 |
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| CDS TCA 72 bp | ACCTGGCCTCCGAAGCACATGCTGGACTCGGAATTGTaGGGCTGTTGTGTTCCCAAGCATTTTTCTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TWPPKHMLDSEL*GCCVPKHFSQG Trigger: ACCCTGAGAAAAATGCTTGGGAACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCGGAGGCCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000465232.5 ENST00000493461.1 |
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| CDS CAA 90 bp | AGGCTGGCCTCCGAAGCACATGCTGGACTCGGAATTGTGAGGCTGTaGTGTTCCCAAGCATTTTTCTCAGGGTTGGGCTTTTCTAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLASEAHAGLGIVRL*CSQAFFSGLGFSSF Trigger: AAAGCTAGAAAAGCCCAACCCTGAGAAAAATGCTTGGGAACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCGGAGGCCAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483455.5 ENST00000483755.5 ENST00000496079.1 ENST00000497219.5 |
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| CDS TCA 72 bp | CCCAGCAATTTGGGAGGTCAAGTTGGAAGAATTGCTTaGGGCCACGAGTTTCAGACCAGCCTGGGCAACATA | + |
|
Preference number: 6 (lower is better) Translates to: PSNLGGQVGRIA*GHEFQTSLGNI Trigger: TATGTTGCCCAGGCTGGTCTGAAACTCGTGGCCTCAAGCAATTCTTCCAACTTGACCTCCCAAATTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS GCA 72 bp | ATTAGGCCACTAGGGTGGTCAGTCATCTGGCCTCACTaGCACCCTGCCCCATATGAAAATTTCAGCTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: IRPLGWSVIWPH*HPAPYENFSSQ Trigger: TTGTGAGCTGAAATTTTCATATGGGGCAGGGTGGCAGTGAGGCCAGATGACTGACCACCCTAGTGGCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000493461.1 ENST00000497219.5 |
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| CDS CAA 72 bp | AGCAAGTACAAGGGCCCCAGGGCAAGAACATGCTCCTaGTGTTCGTGCAAGAGAAAGGCTGAAAAGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SKYKGPRARTCS*CSCKRKAEKKP Trigger: TGGCTTCTTTTCAGCCTTTCTCTTGCACGAACACAAGGAGCATGTTCTTGCCCTGGGGCCCTTGTACTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CAA 72 bp | TTGTTTACACTTCTCTCTCTGCTAGATCACTGTCCATaGCATACTCAGCCTCCAGCAGAGGGTCGGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LFTLLSLLDHCP*HTQPPAEGRCS Trigger: GGAGCACCGACCCTCTGCTGGAGGCTGAGTATGCAATGGACAGTGATCTAGCAGAGAGAGAAGTGTAAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497219.5 |
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| CDS CAA 90 bp | TACCTGGCCTCCGAAGCACATGCTGGACTCGGAATTGTGAGGCTGTaGTGTTCCCAAGCATTTTTCTCAGGGTTGGGCTTTTCTAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: YLASEAHAGLGIVRL*CSQAFFSGLGFSSF Trigger: AAAGCTAGAAAAGCCCAACCCTGAGAAAAATGCTTGGGAACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCGGAGGCCAGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000465232.5 ENST00000493461.1 |
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| CDS GCA 72 bp | TCAAGTTGTGAGGAAGCACTTGTTCATCTCACCCCGTaGTCAATGGCCTCTTCTCGATTCTGCAACACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSCEEALVHLTP*SMASSRFCNTA Trigger: TGCAGTGTTGCAGAATCGAGAAGAGGCCATTGAGCACGGGGTGAGATGAACAAGTGCTTCCTCACAACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368887.7 ENST00000497219.5 |
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| CDS CCA 72 bp | TGTAAACAGGTCTCAAGAGGACAATCTAAAAAGAGCTaGCAAAAGCCCAACGAATCGCCGGTCGCGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CKQVSRGQSKKS*QKPNESPVALL Trigger: CAAGAGCGCGACCGGCGATTCGTTGGGCTTTTGCCAGCTCTTTTTAGATTGTCCTCTTGAGACCTGTTTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483455.5 |
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| CDS CAA 72 bp | TCCGAAGCACATGCTGGACTCGGAATTGTGAGGCTGTaGTGTTCCCAAGCATTTTTCTCAGGGTTGGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SEAHAGLGIVRL*CSQAFFSGLGF Trigger: AAAGCCCAACCCTGAGAAAAATGCTTGGGAACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000465232.5 ENST00000483455.5 ENST00000483755.5 ENST00000493461.1 ENST00000496079.1 ENST00000497219.5 |
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| CDS TCA 72 bp | CACATGGCTTCAGTCCTGTTGGGTGGGACAGACATCTaGCACCCATTAATGACAGCCATCAAGAAGTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: HMASVLLGGTDI*HPLMTAIKKYS Trigger: GGAATACTTCTTGATGGCTGTCATTAATGGGTGTCAGATGTCTGTCCCACCCAACAGGACTGAAGCCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000493461.1 ENST00000497219.5 |
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| CDS CCA 72 bp | TTCTGGAGTGAGTGCGATCTCACTGGGTCCAGATCTTaGCTCTGCCACTTCCTACCTGGGTATATTACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: FWSECDLTGSRS*LCHFLPGYITL Trigger: TAAAGTAATATACCCAGGTAGGAAGTGGCAGAGCCAAGATCTGGACCCAGTGAGATCGCACTCACTCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CAA 72 bp | CAGCCAACCTTTGCGCTTCTGCACTTGATGTGTTCATaGCCTAGAATGATCCTCCAGATAGCTGCATGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QPTFALLHLMCS*PRMILQIAAWF Trigger: GAACCATGCAGCTATCTGGAGGATCATTCTAGGCAATGAACACATCAAGTGCAGAAGCGCAAAGGTTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000497219.5 |
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| CDS GCA 72 bp | AGTGAGTGCGATCTCACTGGGTCCAGATCTTGGCTCTaGCACTTCCTACCTGGGTATATTACTTTACTTATC | + |
|
Preference number: 6 (lower is better) Translates to: SECDLTGSRSWL*HFLPGYITLLI Trigger: GATAAGTAAAGTAATATACCCAGGTAGGAAGTGGCAGAGCCAAGATCTGGACCCAGTGAGATCGCACTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CCA 72 bp | CACTGGGTCCAGATCTTGGCTCTGCCACTTCCTACCTaGGTATATTACTTTACTTATCTGGGCCTCAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: HWVQILALPLPT*VYYFTYLGLSY Trigger: ATAACTGAGGCCCAGATAAGTAAAGTAATATACCCAGGTAGGAAGTGGCAGAGCCAAGATCTGGACCCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CAA 72 bp | CAACACTGCAACCAGCCAACCTTTGCGCTTCTGCACTaGATGTGTTCATTGCCTAGAATGATCCTCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: QHCNQPTFALLH*MCSLPRMILQI Trigger: TATCTGGAGGATCATTCTAGGCAATGAACACATCAAGTGCAGAAGCGCAAAGGTTGGCTGGTTGCAGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000497219.5 |
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| CDS CAA 90 bp | TTTAAGCATTTGTTTACACTTCTCTCTCTGCTAGATCACTGTCCATaGCATACTCAGCCTCCAGCAGAGGGTCGGTGCTCCAGAAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: FKHLFTLLSLLDHCP*HTQPPAEGRCSRNV Trigger: TACATTTCTGGAGCACCGACCCTCTGCTGGAGGCTGAGTATGCAATGGACAGTGATCTAGCAGAGAGAGAAGTGTAAACAAATGCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497219.5 |
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| CDS CCA 72 bp | TGTAAACAGGTCTCAAGAGGACAATCTAAAAAGAGCTaGCAAAAGCCCAACGAATATTTCCGAGCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CKQVSRGQSKKS*QKPNEYFRASW Trigger: CCAGCTGGCTCGGAAATATTCGTTGGGCTTTTGCCAGCTCTTTTTAGATTGTCCTCTTGAGACCTGTTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000483755.5 ENST00000493461.1 ENST00000497219.5 |
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| CDS TCA 72 bp | AACGTCTTATATGAAAAATACTGTACAACCACATGCTaGGCTGGGGGTGTAGCAAGATCCTTGCGTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: NVLYEKYCTTTC*AGGVARSLRLP Trigger: TGGCAAACGCAAGGATCTTGCTACACCCCCAGCTCAGCATGTGGTTGTACAGTATTTTTCATATAAGACGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS GCA 72 bp | GGCCACAAGAGCTCAACTTTATTCTCTATGGAAAGATaGCTGGTCTTTACTTTCTGGCTCCCGCTTATTTAC | + |
|
Preference number: 6 (lower is better) Translates to: GHKSSTLFSMER*LVFTFWLPLIY Trigger: GTAAATAAGCGGGAGCCAGAAAGTAAAGACCAGGCATCTTTCCATAGAGAATAAAGTTGAGCTCTTGTGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
||
| CDS CCA 72 bp | TGTAAACAGGTCTCAAGAGGACAATCTAAAAAGAGCTaGCAAAAGCCCAACGAATCTGATCACAGACGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CKQVSRGQSKKS*QKPNESDHRRS Trigger: GGAACGTCTGTGATCAGATTCGTTGGGCTTTTGCCAGCTCTTTTTAGATTGTCCTCTTGAGACCTGTTTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465232.5 |
||
| CDS CCA 72 bp | AGAAGAAAAGACCTCAGGCTAACAAATGAGTTGATATaGGATGGGGAAAGATGGAGGAAACAAACTGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRKDLRLTNELI*DGERWRKQTEG Trigger: CCCCTCAGTTTGTTTCCTCCATCTTTCCCCATCCCATATCAACTCATTTGTTAGCCTGAGGTCTTTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497219.5 |
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| CDS CAA 72 bp | CTGAGAAGGCTTCCTGATTACCTTTTGCTTCCTTCATaGTCTGAGATACAATCCTTCGGAGTGTCTGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRRLPDYLLLPS*SEIQSFGVSDQ Trigger: CTGATCAGACACTCCGAAGGATTGTATCTCAGACAATGAAGGAAGCAAAAGGTAATCAGGAAGCCTTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000497219.5 |
||
| CDS CAA 90 bp | ATTTCCAAACAGGATTCAAGAGACCAGGGTTGTAGTCCCAGCCATTaGCCGATTTTCCTGATTATGAGCATCAGGTCTCTTCAGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ISKQDSRDQGCSPSH*PIFLIMSIRSLQFL Trigger: AAGAAACTGAAGAGACCTGATGCTCATAATCAGGAAAATCGGCAAATGGCTGGGACTACAACCCTGGTCTCTTGAATCCTGTTTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497219.5 |
||
| CDS TCA 72 bp | TTACTTTCTGGCTCCCGCTTATTTACTGGATATGGATaGGCAAAGTTTCTCACTGAGCAAAGGTCCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLSGSRLFTGYG*AKFLTEQRSMK Trigger: CTTCATGGACCTTTGCTCAGTGAGAAACTTTGCTCATCCATATCCAGTAAATAAGCGGGAGCCAGAAAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
||
| CDS GCA 72 bp | TTGCATCTGCTTATGAGCGTCATCTGGAAGCCCATATaGGTTCTCATACAAAATGAGACATTTGATTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHLLMSVIWKPI*VLIQNETFDWQ Trigger: CTGCCAATCAAATGTCTCATTTTGTATGAGAACGCATATGGGCTTCCAGATGACGCTCATAAGCAGATGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496079.1 |
||
| CDS CAA 72 bp | CAGGTACTTCAACAGTTCCTGTCGAAGCAATTTCCATaGGGATGGCTACAAGAGACCAAAGAATTGCAATTC | + |
|
Preference number: 6 (lower is better) Translates to: QVLQQFLSKQFP*GWLQETKELQF Trigger: GAATTGCAATTCTTTGGTCTCTTGTAGCCATCCCAATGGAAATTGCTTCGACAGGAACTGTTGAAGTACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000493461.1 ENST00000497219.5 |
||
| CDS CCA 72 bp | AAATTTTCCCATTTCACTTTTAGCTTCCACACAAAGTaGGGAATAATGTCTCTCCAATGCCTGTGTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KFSHFTFSFHTK*GIMSLQCLCED Trigger: GTCCTCACACAGGCATTGGAGAGACATTATTCCCCACTTTGTGTGGAAGCTAAAAGTGAAATGGGAAAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CCA 72 bp | ACAAGAGCTCAACTTTATTCTCTATGGAAAGATGCCTaGTCTTTACTTTCTGGCTCCCGCTTATTTACTGGA | + |
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Preference number: 6 (lower is better) Translates to: TRAQLYSLWKDA*SLLSGSRLFTG Trigger: TCCAGTAAATAAGCGGGAGCCAGAAAGTAAAGACCAGGCATCTTTCCATAGAGAATAAAGTTGAGCTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CCA 72 bp | ATCTTTGTCCATTTGCATCTGCTTATGAGCGTCATCTaGAAGCCCATATGCGTTCTCATACAAAATGAGACA | + |
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Preference number: 6 (lower is better) Translates to: IFVHLHLLMSVI*KPICVLIQNET Trigger: TGTCTCATTTTGTATGAGAACGCATATGGGCTTCCAGATGACGCTCATAAGCAGATGCAAATGGACAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496079.1 |
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| CDS CAA 90 bp | GAAGTATTCCAGGTACTTCAACAGTTCCTGTCGAAGCAATTTCCATaGGGATGGCTACAAGAGACCAAAGAATTGCAATTCATATTAGGC | + |
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Preference number: 6 (lower is better) Translates to: EVFQVLQQFLSKQFP*GWLQETKELQFILG Trigger: GCCTAATATGAATTGCAATTCTTTGGTCTCTTGTAGCCATCCCAATGGAAATTGCTTCGACAGGAACTGTTGAAGTACCTGGAATACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000493461.1 ENST00000497219.5 |
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| CDS CAA 90 bp | ATGTCATCTCTGAGAAGGCTTCCTGATTACCTTTTGCTTCCTTCATaGTCTGAGATACAATCCTTCGGAGTGTCTGATCAGTTTTATGAA | + |
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Preference number: 6 (lower is better) Translates to: MSSLRRLPDYLLLPS*SEIQSFGVSDQFYE Trigger: TTCATAAAACTGATCAGACACTCCGAAGGATTGTATCTCAGACAATGAAGGAAGCAAAAGGTAATCAGGAAGCCTTCTCAGAGATGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000497219.5 |
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| CDS TCA 72 bp | GACTGGGCCTCAAATGCTGCAGAAAATATCAGATCTTaGTCCTTTAAGCAGGTTATAAAATCTTCCCACATG | + |
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Preference number: 6 (lower is better) Translates to: DWASNAAENIRS*SFKQVIKSSHM Trigger: CATGTGGGAAGATTTTATAACCTGCTTAAAGGATCAAGATCTGATATTTTCTGCAGCATTTGAGGCCCAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368887.7 ENST00000405485.2 ENST00000406217.8 ENST00000493461.1 ENST00000497219.5 |
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| CDS GCA 72 bp | TTTCCATCGCCAGCGAAGTTTCTGCTAGAAATATGCTaGTCTAGAACTCTCAAGACATACGTAATGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: FPSPAKFLLEIC*SRTLKTYVMNE Trigger: TTCATTCATTACGTATGTCTTGAGAGTTCTAGAGCAGCATATTTCTAGCAGAAACTTCGCTGGCGATGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CCA 72 bp | TTATTCTCTATGGAAAGATGCCTGGTCTTTACTTTCTaGCTCCCGCTTATTTACTGGATATGGATGAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LFSMERCLVFTF*LPLIYWIWMSK Trigger: TTTGCTCATCCATATCCAGTAAATAAGCGGGAGCCAGAAAGTAAAGACCAGGCATCTTTCCATAGAGAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS TCA 72 bp | ATGGGGATAGTAGTTTCTACCCTTAAAGGGTGGTTGTaGGGACTGAATGAGACCATATATATAAAGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: MGIVVSTLKGWL*GLNETIYIKCS Trigger: TGAACACTTTATATATATGGTCTCATTCAGTCCTCACAACCACCCTTTAAGGGTAGAAACTACTATCCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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| CDS CCA 72 bp | CTTCAACAGTTCCTGTCGAAGCAATTTCCATTGGGATaGCTACAAGAGACCAAAGAATTGCAATTCATATTA | + |
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Preference number: 6 (lower is better) Translates to: LQQFLSKQFPLG*LQETKELQFIL Trigger: TAATATGAATTGCAATTCTTTGGTCTCTTGTAGCCATCCCAATGGAAATTGCTTCGACAGGAACTGTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000493461.1 ENST00000497219.5 |
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| CDS CAA 90 bp | TATACATATATCTCCACTCTAGCAGTGCTTACACAGTTTAAGCATTaGTTTACACTTCTCTCTCTGCTAGATCACTGTCCATTGCATACT | + |
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Preference number: 6 (lower is better) Translates to: YTYISTLAVLTQFKH*FTLLSLLDHCPLHT Trigger: AGTATGCAATGGACAGTGATCTAGCAGAGAGAGAAGTGTAAACAAATGCTTAAACTGTGTAAGCACTGCTAGAGTGGAGATATATGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497219.5 |
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| CDS CAA 72 bp | GAAGACAGTATAATCGTAACAGTTATGAGCAGACATTaGCAAATAAACTTGGGTTCAAATCTTTCTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: EDSIIVTVMSRH*QINLGSNLSGQ Trigger: TTGTCCAGAAAGATTTGAACCCAAGTTTATTTGCAAATGTCTGCTCATAACTGTTACGATTATACTGTCTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493461.1 |
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