Pregenerated sensors for PSPC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000121390Ensembl transcript IDs: ENST00000338910.9, ENST00000427943.1, ENST00000471658.5, ENST00000492741.5, ENST00000497722.2, ENST00000619300.4, ENST00000635251.1, ENST00000635562.1
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCAAGACCACTATGGAATTCACACTGCTTTCTATAGACTTCCACTaGCTTGCAGCTAATGGTCCTTACACAGCAAAGTTGGGATTTCTA | + |
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Preference number: 1 (lower is better) Translates to: VKTTMEFTLLSIDFH*LAANGPYTAKLGFL Trigger: TAGAAATCCCAACTTTGCTGTGTAAGGACCATTAGCTGCAAGTCAGTGGAAGTCTATAGAAAGCAGTGTGAATTCCATAGTGGTCTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATAATTACACTGCAAGCTaGACTTCGGGTAACTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: ASAMIAQTSINCLYGVRNNYTAS*TSGNFS Trigger: GCTGAAGTTACCCGAAGTTCAGCTTGCAGTGTAATT...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635562.1 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTCCCACAAAATGTTTTaGCCTGAAAGGAAGTATGAT | + |
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Preference number: 2 (lower is better) Translates to: ASAMIAQTSINCLYGVRNSHKMF*PERKYD Trigger: ATCATACTTCCTTTCAGGTCAAAACATTTTGTGGGA...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| 3UTR TCA 72 bp | ACTATGGAATTCACACTGCTTTCTATAGACTTCCACTaGCTTGCAGCTAATGGTCCTTACACAGCAAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: TMEFTLLSIDFH*LAANGPYTAKL Trigger: CAACTTTGCTGTGTAAGGACCATTAGCTGCAAGTCAGTGGAAGTCTATAGAAAGCAGTGTGAATTCCATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CCA 90 bp | ACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGCCTCACTATCTCCTCGTCCGGGTaGTCCTCTGGAGGCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: TAKLGFLDVSFQVRKSLTISSSG*SSGGAG Trigger: GCCCGCGCCTCCAGAGGACCACCCGGACGAGGAGAT...AGTGAGGCTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | TCCTTCCAGGTTCGGAAAAGCCTCACTAGGCAAGTGGCAAGACTGAAAGGAAGTAAGAGGCGGCAGCGCTaGGTGTACGTCTTCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SFQVRKSLTRQVARLKGSKRRQR*VYVFSP Trigger: GGGCGAGAAGACGTACACGCAGCGCTGCCGCCTCTT...ACTTCCTTTCAGTCTTGCCACTTGCCTAGTGAGGCTTTTCCGAACCTGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR TCA 90 bp | TTCCAGGTTCGGAAAAGCCTCACTAGGCAAGTGGCAAGACTGAAAGGAAGTATGTGGATTCCAAGCGGATaGAGCCGAAGCCACGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: FQVRKSLTRQVARLKGSMWIPSG*SRSHGP Trigger: GGGACCGTGGCTTCGGCTTCATCCGCTTGGAATCCA...CATACTTCCTTTCAGTCTTGCCACTTGCCTAGTGAGGCTTTTCCGAACCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATATCTCCTCGTCCGGGTaGTCCTCTGGAGGCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNISSSG*SSGGAG Trigger: GCCCGCGCCTCCAGAGGACCACCCGGACGAGGAGAT...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR TCA 90 bp | ACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGCCTCACTGTAGAGGTCTGCTCTTaGGAATGGTGCCGTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TAKLGFLDVSFQVRKSLTVEVCS*EWCRPA Trigger: AGCTGGACGGCACCATTCTCAAGAGCAGACCTCTAC...AGTGAGGCTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR TCA 90 bp | TCCTTCCAGGTTCGGAAAAGCCTCACTAGGCAAGTGGCAAGACTGAAAGGAAGTTTAACATCATCTTACTaGGTTCGCCTCGGACACCGG | + |
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Preference number: 4 (lower is better) Translates to: SFQVRKSLTRQVARLKGSLTSSY*VRLGHR Trigger: CCGGTGTCCGAGGCGAACTCAGTAAGATGATGTTAA...ACTTCCTTTCAGTCTTGCCACTTGCCTAGTGAGGCTTTTCCGAACCTGGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATAAGAGGCGGCAGCGCTaGGTGTACGTCTTCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNKRRQR*VYVFSP Trigger: GGGCGAGAAGACGTACACGCAGCGCTGCCGCCTCTT...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | ACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGCCTCACTCTTGACAGTCAAGGCTaGTCCATGTGTAGCGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: TAKLGFLDVSFQVRKSLTLDSQG*SMCSEA Trigger: CGCTTCGCTACACATGGAGCAGCCTTGACTGTCAAG...AGTGAGGCTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CCA 90 bp | TCCTTCCAGGTTCGGAAAAGCCTCACTAGGCAAGTGGCAAGACTGAAAGGAAGTCTGCATCAGCTTCTCTaGCAAGCCATCTTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: SFQVRKSLTRQVARLKGSLHQLL*QAIFII Trigger: GATGATGAAGATGGCTTGCCAGAGAAGCTGATGCAG...ACTTCCTTTCAGTCTTGCCACTTGCCTAGTGAGGCTTTTCCGAACCTGGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR TCA 90 bp | TGTTTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGTGGATTCCAAGCGGATaGAGCCGAAGCCACGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: CFDLKGSMIPVLLVLTLLWIPSG*SRSHGP Trigger: GGGACCGTGGCTTCGGCTTCATCCGCTTGGAATCCA...CAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR TCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATCCATGGGTTCCACAATaGCTGGACGAGGGGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNPWVPQ*LDEGSL Trigger: CAACGACCCCTCGTCCAGTCATTGTGGAACCCATGG...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATGGCTTAAAGCCCTCTTaGTGTCGCCTCAGTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNGLKPS*CRLSSS Trigger: GGAGGAACTGAGGCGACAGCAAGAGGGCTTTAAGCC...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR GCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATCTTGACAGTCAAGGCTaGTCCATGTGTAGCGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNLDSQG*SMCSEA Trigger: CGCTTCGCTACACATGGAGCAGCCTTGACTGTCAAG...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | GCTAATGGTCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTTCGTGCAGGAGGTTTTaGTGCAAACTCTACAAAACC | + |
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Preference number: 4 (lower is better) Translates to: ANGPYTAKLGFLDVSFQVSCRRF*CKLYKT Trigger: GGTTTTGTAGAGTTTGCAGCAAAACCTCCTGCACGA...AACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGACCATTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTCCTCACGCCGCCGATaGTCCTCTTCATGTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNSSRRR*SSSCLS Trigger: ACTAAGACATGAAGAGGAGCATCGGCGGCGTGAGGA...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | TGTTTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGGGCTTAAAGCCCTCTTaGTGTCGCCTCAGTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: CFDLKGSMIPVLLVLTLLGLKPS*CRLSSS Trigger: GGAGGAACTGAGGCGACAGCAAGAGGGCTTTAAGCC...CAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR TCA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTCTGGAGAAAGGTTCTTaGCAGTCAAGGCTGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSLEKGS*QSRLLH Trigger: ATGGAGCAGCCTTGACTGTCAAGAACCTTTCTCCAG...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR TCA 90 bp | CTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGCCATGGGTTCCACAATaGCTGGACGAGGGGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: LQSFKSEVLDLSQILAKKPWVPQ*LDEGSL Trigger: CAACGACCCCTCGTCCAGTCATTGTGGAACCCATGG...CTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR TCA 90 bp | TTAGACTTATCCCAAATCCTTGCTAAGAAGTCAAGACCACTATGGAATTCACACCTGGAGAAAGGTTCTTaGCAGTCAAGGCTGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LDLSQILAKKSRPLWNSHLEKGS*QSRLLH Trigger: ATGGAGCAGCCTTGACTGTCAAGAACCTTTCTCCAG...GTGTGAATTCCATAGTGGTCTTGACTTCTTAGCAAGGATTTGGGATAAGTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | TCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGTGCAGGAGGTTTTGCTaGAAACTCTACAAAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLHSKVGISRRLLPGSEKCRRFC*KLYKTF Trigger: AAAGGTTTTGTAGAGTTTGCAGCAAAACCTCCTGCA...CTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTTTCCAGAGCCTTTCGTaGAGGAGGTTTTGCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSFQSLS*RRFCCK Trigger: TTTGCAGCAAAACCTCCTGCACGAAAGGCTCTGGAA...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | TCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGCGCCTCATTAGATCTTaGCTCATTAGCATTAATTGG | + |
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Preference number: 4 (lower is better) Translates to: SLHSKVGISRRLLPGSEKRLIRS*LISINW Trigger: CCAATTAATGCTAATGAGGCAAGATCTAATGAGGCG...CTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | CTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGGGCTTAAAGCCCTCTTaGTGTCGCCTCAGTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LQSFKSEVLDLSQILAKKGLKPS*CRLSSS Trigger: GGAGGAACTGAGGCGACAGCAAGAGGGCTTTAAGCC...CTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | GGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAAGGCAAGTGCTATGATTaGCCAGACATCCATAAACTG | + |
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Preference number: 4 (lower is better) Translates to: GKCYDCPDIHKLLVWSKKGKCYD*PDIHKL Trigger: CAGTTTATGGATGTCTGGGCAATCATAGCACTTGCC...TTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR CCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATCTGCATCAGCTTCTCTaGCAAGCCATCTTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNLHQLL*QAIFII Trigger: GATGATGAAGATGGCTTGCCAGAGAAGCTGATGCAG...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CCA 90 bp | GCTAATGGTCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTATTTTCCATGTAGTTTaGCTTAAAGCCCTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ANGPYTAKLGFLDVSFQVIFHVV*LKALLL Trigger: CAGCAAGAGGGCTTTAAGCCAAACTACATGGAAAAT...AACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGACCATTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR TCA 90 bp | TGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTCATATTAACATCATCTTACTaGGTTCGCCTCGGACACCGG | + |
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Preference number: 4 (lower is better) Translates to: CYDCPDIHKLLVWSKKFILTSSY*VRLGHR Trigger: CCGGTGTCCGAGGCGAACTCAGTAAGATGATGTTAA...TATGAATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | CTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGGGTGCCGTCCAGCTCTaGTTTTGCAATTTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LQSFKSEVLDLSQILAKKGAVQL*FCNFSQ Trigger: CTGGCTGAAATTGCAAAAGCAGAGCTGGACGGCACC...CTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | TCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGAGCCTTCCATCGAGATaGATACTCAAATTCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: SLHSKVGISRRLLPGSEKSLPSR*ILKFKC Trigger: ACATTTGAATTTGAGTATGCATCTCGATGGAAGGCT...CTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | AGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGTCAAGATCCTCACGCCGCCGATaGTCCTCTTCATGTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: SFKSEVLDLSQILAKKSRSSRRR*SSSCLS Trigger: ACTAAGACATGAAGAGGAGCATCGGCGGCGTGAGGA...TCTTGACTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CCA 90 bp | TCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGAAGTCAAGACCACTATaGAATTCACACTGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: SLHSKVGISRRLLPGSEKKSRPL*NSHCFL Trigger: TAGAAAGCAGTGTGAATTCCATAGTGGTCTTGACTT...CTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR TCA 90 bp | TTAGACTTATCCCAAATCCTTGCTAAGAAGTCAAGACCACTATGGAATTCACACAATTACACTGCAAGCTaGACTTCGGGTAACTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LDLSQILAKKSRPLWNSHNYTAS*TSGNFS Trigger: GCTGAAGTTACCCGAAGTTCAGCTTGCAGTGTAATT...GTGTGAATTCCATAGTGGTCTTGACTTCTTAGCAAGGATTTGGGATAAGTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | TCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGTTCATGCAGTTAACATaGTTCAAAGCTTTAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SLHSKVGISRRLLPGSEKFMQLT*FKALSL Trigger: CAGACTTAAAGCTTTGAAGCATGTTAACTGCATGAA...CTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CCA 90 bp | GGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAAATTTTCCATGTAGTTTaGCTTAAAGCCCTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GKCYDCPDIHKLLVWSKKIFHVV*LKALLL Trigger: CAGCAAGAGGGCTTTAAGCCAAACTACATGGAAAAT...TTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR TCA 90 bp | TTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGAATTCTACTGGACCAAACTaGGAAAATGCTTGCTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: FDLKGSMIPVLLVLTLLNSTGPN*ENACSS Trigger: GCTAGAGCAAGCATTTTCTCAGTTTGGTCCAGTAGA...ATTCAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR TCA 90 bp | ATGTTTTTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTAAATTACACTGCAAGCTaGACTTCGGGTAACTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: MFLNGKCYDCPDIHKLLVNYTAS*TSGNFS Trigger: GCTGAAGTTACCCGAAGTTCAGCTTGCAGTGTAATT...TACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAAAAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR GCA 90 bp | ATGTTTTTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATCGTGCAGGAGGTTTTaGTGCAAACTCTACAAAACC | + |
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Preference number: 4 (lower is better) Translates to: MFLNGKCYDCPDIHKLLVSCRRF*CKLYKT Trigger: GGTTTTGTAGAGTTTGCAGCAAAACCTCCTGCACGA...TACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAAAAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | CTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGTTCCAGAGCCTTTCGTaGAGGAGGTTTTGCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LQSFKSEVLDLSQILAKKFQSLS*RRFCCK Trigger: TTTGCAGCAAAACCTCCTGCACGAAAGGCTCTGGAA...CTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTCGCCTCATTAGATCTTaGCTCATTAGCATTAATTGG | + |
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Preference number: 4 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSRLIRS*LISINW Trigger: CCAATTAATGCTAATGAGGCAAGATCTAATGAGGCG...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | GGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTTTTAAATGGCAAGTaGTATGATTGCCCAGACATC | + |
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Preference number: 4 (lower is better) Translates to: GKCYDCPDIHKLLVWSKKFLNGK*YDCPDI Trigger: GATGTCTGGGCAATCATAGCACTTGCCATTTAAAAA...TTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR CCA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTCTCATTGGAAACAACTaGAGAAAGGTTCTTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSLIGNN*RKVLDS Trigger: ACTGTCAAGAACCTTTCTCCAGTTGTTTCCAATGAG...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATATTTTCCATGTAGTTTaGCTTAAAGCCCTCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNIFHVV*LKALLL Trigger: CAGCAAGAGGGCTTTAAGCCAAACTACATGGAAAAT...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR TCA 90 bp | CTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGTCTACTGGACCAAACTaGGAAAATGCTTGCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSFKSEVLDLSQILAKKSTGPN*ENACSS Trigger: GCTAGAGCAAGCATTTTCTCAGTTTGGTCCAGTAGA...CTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | ATGTTTTTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATTCTCAATGCGCACTTaGTTCAGGTTTCCTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: MFLNGKCYDCPDIHKLLVFSMRT*FRFPLN Trigger: GTTAAGAGGAAACCTGAAGCAAGTGCGCATTGAGAA...TACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAAAAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTATTTGCTTCCGTTTTTaGAACTCTTGGTTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSICFRF*NSWFLS Trigger: ACTCAGAAACCAAGAGTTGCAAAAACGGAAGCAAAT...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTTTTTTAAATGGCAAGTaGTATGATTGCCCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSFLNGK*YDCPDI Trigger: GATGTCTGGGCAATCATAGCACTTGCCATTTAAAAA...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR GCA 90 bp | GGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAAAATGCAAAGGAAAACTaGAGTTTACACTTATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKCYDCPDIHKLLVWSKKNAKEN*SLHLFW Trigger: CCAGAATAAGTGTAAACTGCAGTTTTCCTTTGCATT...TTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR CCA 90 bp | CTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGGCTCTAGCAGCTCATTaGAAACAACTGGAGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSFKSEVLDLSQILAKKALAAH*KQLEKG Trigger: ACCTTTCTCCAGTTGTTTCCAATGAGCTGCTAGAGC...CTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR TCA 90 bp | TGTTTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGTCCCACAAAATGTTTTaGCCTGAAAGGAAGTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CFDLKGSMIPVLLVLTLLSHKMF*PERKYD Trigger: ATCATACTTCCTTTCAGGTCAAAACATTTTGTGGGA...CAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR GCA 90 bp | CTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGTTCTCAATGCGCACTTaGTTCAGGTTTCCTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSFKSEVLDLSQILAKKFSMRT*FRFPLN Trigger: GTTAAGAGGAAACCTGAAGCAAGTGCGCATTGAGAA...CTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | TTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGAATTGCAGGAGGTTTTGCTaGAAACTCTACAAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FDLKGSMIPVLLVLTLLNCRRFC*KLYKTF Trigger: AAAGGTTTTGTAGAGTTTGCAGCAAAACCTCCTGCA...ATTCAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTGTCTTAGTTGTATTTaGTTCCGTTTTTGCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASAMIAQTSINCLYGVRNCLSCI*FRFCNS Trigger: AGAGTTGCAAAAACGGAAGCAAATACAACTAAGACA...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAATGCAAAGGAAAACTaGAGTTTACACTTATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSNAKEN*SLHLFW Trigger: CCAGAATAAGTGTAAACTGCAGTTTTCCTTTGCATT...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR GCA 90 bp | ATGTTTTTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTAAGCCAAAACCCTCAATaGAAAGGAAAACTGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MFLNGKCYDCPDIHKLLVSQNPQ*KGKLQF Trigger: AAACTGCAGTTTTCCTTTGCATTGAGGGTTTTGGCT...TACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAAAAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR TCA 90 bp | TTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGAATTCCCACAAAATGTTTTaGCCTGAAAGGAAGTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: FDLKGSMIPVLLVLTLLNSHKMF*PERKYD Trigger: ATCATACTTCCTTTCAGGTCAAAACATTTTGTGGGA...ATTCAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR GCA 90 bp | ATGTTTTTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTAAGCCTTCCATCGAGATaGATACTCAAATTCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: MFLNGKCYDCPDIHKLLVSLPSR*ILKFKC Trigger: ACATTTGAATTTGAGTATGCATCTCGATGGAAGGCT...TACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAAAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR GCA 90 bp | TTAGACTTATCCCAAATCCTTGCTAAGAAGTCAAGACCACTATGGAATTCACACTGTCTTAGTTGTATTTaGTTCCGTTTTTGCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLSQILAKKSRPLWNSHCLSCI*FRFCNS Trigger: AGAGTTGCAAAAACGGAAGCAAATACAACTAAGACA...GTGTGAATTCCATAGTGGTCTTGACTTCTTAGCAAGGATTTGGGATAAGTCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | TGTTTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGCAGACATCCATAAACTaGTTGTATGGAGTAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CFDLKGSMIPVLLVLTLLQTSIN*LYGVRN Trigger: ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTG...CAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS-3UTR CCA 90 bp | ATGCTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGCTCATTGGAAACAACTaGAGAAAGGTTCTTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLQSFKSEVLDLSQILAKLIGNN*RKVLDS Trigger: ACTGTCAAGAACCTTTCTCCAGTTGTTTCCAATGAG...CTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | CTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGATTTGCTTCCGTTTTTaGAACTCTTGGTTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSFKSEVLDLSQILAKKICFRF*NSWFLS Trigger: ACTCAGAAACCAAGAGTTGCAAAAACGGAAGCAAAT...CTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR GCA 90 bp | ATGTTTTTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTACAGACATCCATAAACTaGTTGTATGGAGTAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MFLNGKCYDCPDIHKLLVQTSIN*LYGVRN Trigger: ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTG...TACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAAAAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS GCA 90 bp | GAAGGTGACGCCACCACGCATCCCCGCAGCACACACTCCTTCCTGTaGCGACTCCCGCTATTTGCTTGCCTGAGCCAGTTCATGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGDATTHPRSTHSFL*RLPLFACLSQFMFQ Trigger: CTGAAACATGAACTGGCTCAGGCAAGCAAATAGCGGGAGTCGGCACAGGAAGGAGTGTGTGCTGCGGGGATGCGTGGTGGCGTCACCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS GCA 90 bp | CACCGGATACAGGCGCCCGCTGCAGCTGCACATTCAAAATGGCGCTaGCACAAACTGCAGTTAGAAGAAGAGACGCCGGTGCAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRIQAPAAAAHSKWR*HKLQLEEETPVQVP Trigger: TGGGACTTGCACCGGCGTCTCTTCTTCTAACTGCAGTTTGTGGCAGCGCCATTTTGAATGTGCAGCTGCAGCGGGCGCCTGTATCCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427943.1 ENST00000619300.4 |
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| CDS CCA 90 bp | CTCGGACACCGGATACAGGCGCCCGCTGCAGCTGCACATTCAAAATaGCGCTGCCACAAACTGCAGTTAGAAGAAGAGACGCCGGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGHRIQAPAAAAHSK*RCHKLQLEEETPVQ Trigger: TTGCACCGGCGTCTCTTCTTCTAACTGCAGTTTGTGGCAGCGCCATTTTGAATGTGCAGCTGCAGCGGGCGCCTGTATCCGGTGTCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427943.1 ENST00000619300.4 |
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| CDS GCA 90 bp | GACTCCAGGGCGCGAAGGCGGGCCGGGTTTTTCTCAATGCGCACTTaGTTCAGGTTTCCTCTTAACATCATCTTACTGAGTTCGCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: DSRARRRAGFFSMRT*FRFPLNIILLSSPR Trigger: CCGAGGCGAACTCAGTAAGATGATGTTAAGAGGAAACCTGAAGCAAGTGCGCATTGAGAAAAACCCGGCCCGCCTTCGCGCCCTGGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000338910.9 ENST00000427943.1 ENST00000471658.5 ENST00000492741.5 ENST00000619300.4 |
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| CDS TCA 90 bp | TCTCAATGCGCACTTGCTTCAGGTTTCCTCTTAACATCATCTTACTaGGTTCGCCTCGGACACCGGATACAGGCGCCCGCTGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQCALASGFLLTSSY*VRLGHRIQAPAAAA Trigger: TGCAGCTGCAGCGGGCGCCTGTATCCGGTGTCCGAGGCGAACTCAGTAAGATGATGTTAAGAGGAAACCTGAAGCAAGTGCGCATTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427943.1 ENST00000619300.4 |
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| CDS-3UTR CAA 90 bp | ACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGCCTCACTAAGCCACGGTCCCGGTaGATGAAGACTTCGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TAKLGFLDVSFQVRKSLTKPRSR*MKTSLG Trigger: GCCCAGCGAAGTCTTCATCAACCGGGACCGTGGCTT...AGTGAGGCTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS GCA 90 bp | GCATCCCCGCAGCACACACTCCTTCCTGTGCCGACTCCCGCTATTTaGTTGCCTGAGCCAGTTCATGTTTCAGTAAGAACGATTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASPQHTLLPVPTPAI*LPEPVHVSVRTIFL Trigger: GAGAAAAATCGTTCTTACTGAAACATGAACTGGCTCAGGCAAGCAAATAGCGGGAGTCGGCACAGGAAGGAGTGTGTGCTGCGGGGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CCA 90 bp | TGGAAACAAGATCAGGAAACAAGATCAAGGACTCATCTGTCCGCCTaGCACCACTTTAGTTTTGAAGGTGACGCCACCACGCATCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WKQDQETRSRTHLSA*HHFSFEGDATTHPR Trigger: GCGGGGATGCGTGGTGGCGTCACCTTCAAAACTAAAGTGGTGCCAGGCGGACAGATGAGTCCTTGATCTTGTTTCCTGATCTTGTTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS TCA 90 bp | GCAGCACACACTCCTTCCTGTGCCGACTCCCGCTATTTGCTTGCCTaGGCCAGTTCATGTTTCAGTAAGAACGATTTTTCTCCCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: AAHTPSCADSRYLLA*ASSCFSKNDFSPNS Trigger: ACTGTTGGGAGAAAAATCGTTCTTACTGAAACATGAACTGGCTCAGGCAAGCAAATAGCGGGAGTCGGCACAGGAAGGAGTGTGTGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS-3UTR CAA 90 bp | TCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGGTCTTCTCGCCCGGCTaGAGGAAACTCTTGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLHSKVGISRRLLPGSEKVFSPG*RKLLMS Trigger: CGACATCAAGAGTTTCCTCAAGCCGGGCGAGAAGAC...CTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | GCTAATGGTCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCTGGACGAGGGGTCGTaGTTAGCAAGAATGCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ANGPYTAKLGFLDVSFQVLDEGS*LARMPH Trigger: ATGGGGCATTCTTGCTAACAACGACCCCTCGTCCAG...AACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGACCATTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | TCCTTACACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGTGGCTTAAAGCCCTCTaGCTGTCGCCTCAGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLHSKVGISRRLLPGSEKWLKAL*LSPQFL Trigger: GAGGAACTGAGGCGACAGCAAGAGGGCTTTAAGCCA...CTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | ACAGCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGCCTCACTGGCTTGAGGAAACTCTaGATGTCGATAGTGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: TAKLGFLDVSFQVRKSLTGLRKL*MSIVNP Trigger: GGGGTTCACTATCGACATCAAGAGTTTCCTCAAGCC...AGTGAGGCTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | TTCCAGGTTCGGAAAAGCCTCACTAGGCAAGTGGCAAGACTGAAAGGAAGTATGTGCTCTAGCAGCTCATaGGAAACAACTGGAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQVRKSLTRQVARLKGSMCSSSS*ETTGER Trigger: CCTTTCTCCAGTTGTTTCCAATGAGCTGCTAGAGCA...CATACTTCCTTTCAGTCTTGCCACTTGCCTAGTGAGGCTTTTCCGAACCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGTTGGGATTTCTAGACGTCTCCTTCCAGGTTCGGAAAAGCCTCACTAGGTTCGTGCAGGAGGTTTaGCTGCAAACTCTACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AKLGFLDVSFQVRKSLTRFVQEV*LQTLQN Trigger: GTTTTGTAGAGTTTGCAGCAAAACCTCCTGCACGAA...CCTAGTGAGGCTTTTCCGAACCTGGAAGGAGACGTCTAGAAATCCCAACTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | GGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATGGCTTAAAGCCCTCTaGCTGTCGCCTCAGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GKCYDCPDIHKLLVWSKKWLKAL*LSPQFL Trigger: GAGGAACTGAGGCGACAGCAAGAGGGCTTTAAGCCA...TTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS GCA 90 bp | AGCGTTGAAAAGGAGGGATTTCTTGGCTATTCTGAATTTGTGCATTaGTGCCATACTACTTCCCAACACGAACCAGCAAGACCACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SVEKEGFLGYSEFVH*CHTTSQHEPARPPH Trigger: GTGTGGTGGTCTTGCTGGTTCGTGTTGGGAAGTAGTATGGCAGCAATGCACAAATTCAGAATAGCCAAGAAATCCCTCCTTTTCAACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS GCA 90 bp | CACAGAGCGTTGAAAAGGAGGGATTTCTTGGCTATTCTGAATTTGTaGATTGCTGCCATACTACTTCCCAACACGAACCAGCAAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HRALKRRDFLAILNL*IAAILLPNTNQQDH Trigger: GTGGTCTTGCTGGTTCGTGTTGGGAAGTAGTATGGCAGCAATGCACAAATTCAGAATAGCCAAGAAATCCCTCCTTTTCAACGCTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS-3UTR CAA 90 bp | TGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTCATAAAGCCACGGTCCCGGTaGATGAAGACTTCGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CYDCPDIHKLLVWSKKFIKPRSR*MKTSLG Trigger: GCCCAGCGAAGTCTTCATCAACCGGGACCGTGGCTT...TATGAATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CAA 90 bp | TGTTTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGCGTAGAGGTCTGCTCTaGAGAATGGTGCCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CFDLKGSMIPVLLVLTLLRRGLL*RMVPSS Trigger: GCTGGACGGCACCATTCTCAAGAGCAGACCTCTACG...CAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CAA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTCTGGACGAGGGGTCGTaGTTAGCAAGAATGCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSLDEGS*LARMPH Trigger: ATGGGGCATTCTTGCTAACAACGACCCCTCGTCCAG...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CAA 90 bp | GCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTGGCTTAAAGCCCTCTaGCTGTCGCCTCAGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASAMIAQTSINCLYGVRNWLKAL*LSPQFL Trigger: GAGGAACTGAGGCGACAGCAAGAGGGCTTTAAGCCA...ATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492741.5 ENST00000635562.1 |
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| CDS GCA 90 bp | CTTGTATTGCAAAATCCCACAAAGGATCCTCACTCCCACTGTGTCTaGAAAACCGTATTCCACTTGTACCAAGGCAGGGAATACCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLQNPTKDPHSHCV*KTVFHLYQGREYQC Trigger: ACATTGGTATTCCCTGCCTTGGTACAAGTGGAATACGGTTTTGCAGACACAGTGGGAGTGAGGATCCTTTGTGGGATTTTGCAATACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS GCA 90 bp | GTTGAAAAGGAGGGATTTCTTGGCTATTCTGAATTTGTGCATTGCTaGCATACTACTTCCCAACACGAACCAGCAAGACCACCACACCAA | + |
|
Preference number: 5 (lower is better) Translates to: VEKEGFLGYSEFVHC*HTTSQHEPARPPHQ Trigger: TTGGTGTGGTGGTCTTGCTGGTTCGTGTTGGGAAGTAGTATGGCAGCAATGCACAAATTCAGAATAGCCAAGAAATCCCTCCTTTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS-3UTR CAA 90 bp | TGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTCATAGTCTTCTCGCCCGGCTaGAGGAAACTCTTGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CYDCPDIHKLLVWSKKFIVFSPG*RKLLMS Trigger: CGACATCAAGAGTTTCCTCAAGCCGGGCGAGAAGAC...TATGAATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CAA 90 bp | AGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGTCAAGACGTAGAGGTCTGCTCTaGAGAATGGTGCCGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SFKSEVLDLSQILAKKSRRRGLL*RMVPSS Trigger: GCTGGACGGCACCATTCTCAAGAGCAGACCTCTACG...TCTTGACTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS CCA 90 bp | AGTGGCAAGACTGTGAAGACAATGAAGGTTCAGAATTCAGTCAAATaGAAACAAGATCAGGAAACAAGATCAAGGACTCATCTGTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SGKTVKTMKVQNSVK*KQDQETRSRTHLSA Trigger: GGCGGACAGATGAGTCCTTGATCTTGTTTCCTGATCTTGTTTCCATTTGACTGAATTCTGAACCTTCATTGTCTTCACAGTCTTGCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS-3UTR CAA 90 bp | TGTTTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGGGCTTGAGGAAACTCTaGATGTCGATAGTGAACCCC | + |
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Preference number: 5 (lower is better) Translates to: CFDLKGSMIPVLLVLTLLGLRKL*MSIVNP Trigger: GGGGTTCACTATCGACATCAAGAGTTTCCTCAAGCC...CAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CAA 90 bp | ATGCTTCAAAGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGCGTTCGAAGAGCCTCTaGAAGTCCTCCTCCGTGATG | + |
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Preference number: 5 (lower is better) Translates to: MLQSFKSEVLDLSQILAKRSKSL*KSSSVM Trigger: CATCACGGAGGAGGACTTCAAGAGGCTCTTCGAACG...CTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCTTTGAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | AAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGTCAAGACCACTAACTGGAGAAAGGTTCTaGACAGTCAAGGCTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: KSEVLDLSQILAKKSRPLTGERF*TVKAAP Trigger: TGGAGCAGCCTTGACTGTCAAGAACCTTTCTCCAGT...TAGTGGTCTTGACTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | TGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTAAGAAATTCATAACTGGAGAAAGGTTCTaGACAGTCAAGGCTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: CYDCPDIHKLLVWSKKFITGERF*TVKAAP Trigger: TGGAGCAGCCTTGACTGTCAAGAACCTTTCTCCAGT...TATGAATTTCTTACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CAA 90 bp | TGTTTTGACCTGAAAGGAAGTATGATTCCAGTACTTCTGGTCTTAACTCTTCTGTGCTCTAGCAGCTCATaGGAAACAACTGGAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: CFDLKGSMIPVLLVLTLLCSSSS*ETTGER Trigger: CCTTTCTCCAGTTGTTTCCAATGAGCTGCTAGAGCA...CAGAAGAGTTAAGACCAGAAGTACTGGAATCATACTTCCTTTCAGGTCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CAA 90 bp | TTAAATGGCAAGTGCTATGATTGCCCAGACATCCATAAACTGCTTGTATGGAGTTTCGTGCAGGAGGTTTaGCTGCAAACTCTACAAAAC | + |
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Preference number: 5 (lower is better) Translates to: LNGKCYDCPDIHKLLVWSFVQEV*LQTLQN Trigger: GTTTTGTAGAGTTTGCAGCAAAACCTCCTGCACGAA...ACTCCATACAAGCAGTTTATGGATGTCTGGGCAATCATAGCACTTGCCATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492741.5 |
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| CDS-3UTR CAA 90 bp | AGCTTTAAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGTCAAGACCTTACACAGCAAAGTaGGGATTTCTAGACGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SFKSEVLDLSQILAKKSRPYTAK*GFLDVS Trigger: GGAGACGTCTAGAAATCCCAACTTTGCTGTGTAAGG...TCTTGACTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTTAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS-3UTR CAA 90 bp | AAGTCTGAAGTTTTAGACTTATCCCAAATCCTTGCTAAGAAGTCAAGACCACTAACTTATCCCAAATCCTaGCTAAGAAGTCAAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: KSEVLDLSQILAKKSRPLTYPKS*LRSQDH Trigger: GTGGTCTTGACTTCTTAGCAAGGATTTGGGATAAGT...TAGTGGTCTTGACTTCTTAGCAAGGATTTGGGATAAGTCTAAAACTTCAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471658.5 |
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| CDS GCA 72 bp | GCCACCACGCATCCCCGCAGCACACACTCCTTCCTGTaGCGACTCCCGCTATTTGCTTGCCTGAGCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ATTHPRSTHSFL*RLPLFACLSQF Trigger: GAACTGGCTCAGGCAAGCAAATAGCGGGAGTCGGCACAGGAAGGAGTGTGTGCTGCGGGGATGCGTGGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 90 bp | CGGCAGCGCTGCGTGTACGTCTTCTCGCCCGGCTTGAGGAAACTCTaGATGTCGATAGTGAACCCCATCTCCTCGTCCGGGTGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RQRCVYVFSPGLRKL*MSIVNPISSSGWSS Trigger: AGAGGACCACCCGGACGAGGAGATGGGGTTCACTATCGACATCAAGAGTTTCCTCAAGCCGGGCGAGAAGACGTACACGCAGCGCTGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000338910.9 ENST00000427943.1 ENST00000471658.5 ENST00000492741.5 ENST00000619300.4 |
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| CDS CAA 90 bp | CCCACGAAGAGGCGGCAGCGCTGCGTGTACGTCTTCTCGCCCGGCTaGAGGAAACTCTTGATGTCGATAGTGAACCCCATCTCCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PTKRRQRCVYVFSPG*RKLLMSIVNPISSS Trigger: GGACGAGGAGATGGGGTTCACTATCGACATCAAGAGTTTCCTCAAGCCGGGCGAGAAGACGTACACGCAGCGCTGCCGCCTCTTCGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000338910.9 ENST00000427943.1 ENST00000471658.5 ENST00000492741.5 ENST00000619300.4 |
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| CDS GCA 72 bp | TCGCCTCGGACACCGGATACAGGCGCCCGCTGCAGCTaGACATTCAAAATGGCGCTGCCACAAACTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SPRTPDTGARCS*TFKMALPQTAV Trigger: AACTGCAGTTTGTGGCAGCGCCATTTTGAATGTGCAGCTGCAGCGGGCGCCTGTATCCGGTGTCCGAGGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427943.1 ENST00000619300.4 |
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| CDS CAA 72 bp | AGGCGGCAGCGCTGCGTGTACGTCTTCTCGCCCGGCTaGAGGAAACTCTTGATGTCGATAGTGAACCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: RRQRCVYVFSPG*RKLLMSIVNPI Trigger: GATGGGGTTCACTATCGACATCAAGAGTTTCCTCAAGCCGGGCGAGAAGACGTACACGCAGCGCTGCCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000338910.9 ENST00000427943.1 ENST00000471658.5 ENST00000492741.5 ENST00000619300.4 |
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| CDS CAA 72 bp | CAAGGACTCATCTGTCCGCCTGGCACCACTTTAGTTTaGAAGGTGACGCCACCACGCATCCCCGCAGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: QGLICPPGTTLV*KVTPPRIPAAH Trigger: GTGTGCTGCGGGGATGCGTGGTGGCGTCACCTTCAAAACTAAAGTGGTGCCAGGCGGACAGATGAGTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 72 bp | TGCGTGTACGTCTTCTCGCCCGGCTTGAGGAAACTCTaGATGTCGATAGTGAACCCCATCTCCTCGTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CVYVFSPGLRKL*MSIVNPISSSG Trigger: CCCGGACGAGGAGATGGGGTTCACTATCGACATCAAGAGTTTCCTCAAGCCGGGCGAGAAGACGTACACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000338910.9 ENST00000427943.1 ENST00000471658.5 ENST00000492741.5 ENST00000619300.4 |
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| CDS CCA 72 bp | CGGATACAGGCGCCCGCTGCAGCTGCACATTCAAAATaGCGCTGCCACAAACTGCAGTTAGAAGAAGAGACG | + |
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Preference number: 6 (lower is better) Translates to: RIQAPAAAAHSK*RCHKLQLEEET Trigger: CGTCTCTTCTTCTAACTGCAGTTTGTGGCAGCGCCATTTTGAATGTGCAGCTGCAGCGGGCGCCTGTATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427943.1 ENST00000619300.4 |
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| CDS CAA 90 bp | AAACAAGATCAAGGACTCATCTGTCCGCCTGGCACCACTTTAGTTTaGAAGGTGACGCCACCACGCATCCCCGCAGCACACACTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KQDQGLICPPGTTLV*KVTPPRIPAAHTPS Trigger: GGAAGGAGTGTGTGCTGCGGGGATGCGTGGTGGCGTCACCTTCAAAACTAAAGTGGTGCCAGGCGGACAGATGAGTCCTTGATCTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS TCA 72 bp | GCACTTGCTTCAGGTTTCCTCTTAACATCATCTTACTaGGTTCGCCTCGGACACCGGATACAGGCGCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: ALASGFLLTSSY*VRLGHRIQAPA Trigger: AGCGGGCGCCTGTATCCGGTGTCCGAGGCGAACTCAGTAAGATGATGTTAAGAGGAAACCTGAAGCAAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427943.1 ENST00000619300.4 |
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| CDS TCA 72 bp | GATTTTGCCATGTTGTCCAAGCTCGTATGGAACTCCTaGGCGCAGGCAATCCTCCAGCCTTGGCTTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: DFAMLSKLVWNS*AQAILQPWLPK Trigger: TTTGGGAAGCCAAGGCTGGAGGATTGCCTGCGCTCAGGAGTTCCATACGAGCTTGGACAACATGGCAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS GCA 72 bp | CAGCACACACTCCTTCCTGTGCCGACTCCCGCTATTTaGTTGCCTGAGCCAGTTCATGTTTCAGTAAGAACG | + |
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Preference number: 6 (lower is better) Translates to: QHTLLPVPTPAI*LPEPVHVSVRT Trigger: CGTTCTTACTGAAACATGAACTGGCTCAGGCAAGCAAATAGCGGGAGTCGGCACAGGAAGGAGTGTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 90 bp | TCCCCGCAGCACACACTCCTTCCTGTGCCGACTCCCGCTATTTGCTaGCCTGAGCCAGTTCATGTTTCAGTAAGAACGATTTTTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPQHTLLPVPTPAIC*PEPVHVSVRTIFLP Trigger: TGGGAGAAAAATCGTTCTTACTGAAACATGAACTGGCTCAGGCAAGCAAATAGCGGGAGTCGGCACAGGAAGGAGTGTGTGCTGCGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS GCA 72 bp | GCGCGAAGGCGGGCCGGGTTTTTCTCAATGCGCACTTaGTTCAGGTTTCCTCTTAACATCATCTTACTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARRRAGFFSMRT*FRFPLNIILLS Trigger: ACTCAGTAAGATGATGTTAAGAGGAAACCTGAAGCAAGTGCGCATTGAGAAAAACCCGGCCCGCCTTCGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000338910.9 ENST00000427943.1 ENST00000471658.5 ENST00000492741.5 ENST00000619300.4 |
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| CDS CCA 72 bp | GATCAGGAAACAAGATCAAGGACTCATCTGTCCGCCTaGCACCACTTTAGTTTTGAAGGTGACGCCACCACG | + |
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Preference number: 6 (lower is better) Translates to: DQETRSRTHLSA*HHFSFEGDATT Trigger: CGTGGTGGCGTCACCTTCAAAACTAAAGTGGTGCCAGGCGGACAGATGAGTCCTTGATCTTGTTTCCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 72 bp | CCATGTGTAGCGAAGCGAATCCGTAGAGGTCTGCTCTaGAGAATGGTGCCGTCCAGCTCTGCTTTTGCAATT | + |
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Preference number: 6 (lower is better) Translates to: PCVAKRIRRGLL*RMVPSSSAFAI Trigger: AATTGCAAAAGCAGAGCTGGACGGCACCATTCTCAAGAGCAGACCTCTACGGATTCGCTTCGCTACACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000338910.9 ENST00000427943.1 ENST00000471658.5 ENST00000492741.5 ENST00000619300.4 |
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| CDS CAA 72 bp | CCTCACTCCCACTGTGTCTGCAAAACCGTATTCCACTaGTACCAAGGCAGGGAATACCAATGTGTGTGTCGT | + |
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Preference number: 6 (lower is better) Translates to: PHSHCVCKTVFH*YQGREYQCVCR Trigger: ACGACACACACATTGGTATTCCCTGCCTTGGTACAAGTGGAATACGGTTTTGCAGACACAGTGGGAGTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 72 bp | CACACACTCCTTCCTGTGCCGACTCCCGCTATTTGCTaGCCTGAGCCAGTTCATGTTTCAGTAAGAACGATT | + |
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Preference number: 6 (lower is better) Translates to: HTLLPVPTPAIC*PEPVHVSVRTI Trigger: AATCGTTCTTACTGAAACATGAACTGGCTCAGGCAAGCAAATAGCGGGAGTCGGCACAGGAAGGAGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 90 bp | ACAAAGGATCCTCACTCCCACTGTGTCTGCAAAACCGTATTCCACTaGTACCAAGGCAGGGAATACCAATGTGTGTGTCGTGCTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TKDPHSHCVCKTVFH*YQGREYQCVCRAPS Trigger: TGATGGAGCACGACACACACATTGGTATTCCCTGCCTTGGTACAAGTGGAATACGGTTTTGCAGACACAGTGGGAGTGAGGATCCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS GCA 72 bp | TCTCTGTGTCGGATCATTTCTTCCTCACGCCGCCGATaGTCCTCTTCATGTCTTAGTTGTATTTGCTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SLCRIISSSRRR*SSSCLSCICFR Trigger: ACGGAAGCAAATACAACTAAGACATGAAGAGGAGCATCGGCGGCGTGAGGAAGAAATGATCCGACACAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338910.9 ENST00000471658.5 ENST00000492741.5 ENST00000619300.4 |
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| CDS GCA 72 bp | CAAAATCCCACAAAGGATCCTCACTCCCACTGTGTCTaGAAAACCGTATTCCACTTGTACCAAGGCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QNPTKDPHSHCV*KTVFHLYQGRE Trigger: TTCCCTGCCTTGGTACAAGTGGAATACGGTTTTGCAGACACAGTGGGAGTGAGGATCCTTTGTGGGATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS TCA 72 bp | ACTCCTTCCTGTGCCGACTCCCGCTATTTGCTTGCCTaGGCCAGTTCATGTTTCAGTAAGAACGATTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TPSCADSRYLLA*ASSCFSKNDFS Trigger: AGAAAAATCGTTCTTACTGAAACATGAACTGGCTCAGGCAAGCAAATAGCGGGAGTCGGCACAGGAAGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 90 bp | GAAATGGCAGACATAATTTTCCATGTAGTTTGGCTTAAAGCCCTCTaGCTGTCGCCTCAGTTCCTCCTGTTCTCTGTGTCGGATCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: EMADIIFHVVWLKAL*LSPQFLLFSVSDHF Trigger: GAAATGATCCGACACAGAGAACAGGAGGAACTGAGGCGACAGCAAGAGGGCTTTAAGCCAAACTACATGGAAAATTATGTCTGCCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635562.1 |
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| CDS CAA 90 bp | ACAGGCCCTCTTGTACAGATTGTTGATACCTCAGCACAACACAGCTaGAAACCTTGTATTGCAAAATCCCACAAAGGATCCTCACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TGPLVQIVDTSAQHS*KPCIAKSHKGSSLP Trigger: TGGGAGTGAGGATCCTTTGTGGGATTTTGCAATACAAGGTTTCAAGCTGTGTTGTGCTGAGGTATCAACAATCTGTACAAGAGGGCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 72 bp | CTTGTACAGATTGTTGATACCTCAGCACAACACAGCTaGAAACCTTGTATTGCAAAATCCCACAAAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: LVQIVDTSAQHS*KPCIAKSHKGS Trigger: GGATCCTTTGTGGGATTTTGCAATACAAGGTTTCAAGCTGTGTTGTGCTGAGGTATCAACAATCTGTACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS GCA 72 bp | TATGTGAAATATGTATGCAGAAACTGTAGACAAGACTaGCTGCAAGTAAAGGGGATCCACAGATACCCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: YVKYVCRNCRQD*LQVKGIHRYPN Trigger: ATTAGGGTATCTGTGGATCCCCTTTACTTGCAGGCAGTCTTGTCTACAGTTTCTGCATACATATTTCACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 72 bp | GCTCCATCAGAAAAAGACTCTTACCCTAGTAAGACCTaGATCAATGTTCTTCAAAGAGCACATACCCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: APSEKDSYPSKT*INVLQRAHTQN Trigger: GTTTTGGGTATGTGCTCTTTGAAGAACATTGATCAAGGTCTTACTAGGGTAAGAGTCTTTTTCTGATGGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 90 bp | GTGTGTCGTGCTCCATCAGAAAAAGACTCTTACCCTAGTAAGACCTaGATCAATGTTCTTCAAAGAGCACATACCCAAAACATTTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: VCRAPSEKDSYPSKT*INVLQRAHTQNISI Trigger: TATTGAAATGTTTTGGGTATGTGCTCTTTGAAGAACATTGATCAAGGTCTTACTAGGGTAAGAGTCTTTTTCTGATGGAGCACGACACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS TCA 72 bp | CTTCTGGTCTTAACTCTTCTGAATTACACTGCAAGCTaGACTTCGGGTAACTTCAGCCACATTTTCTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LLVLTLLNYTAS*TSGNFSHIFFY Trigger: ATAAAAGAAAATGTGGCTGAAGTTACCCGAAGTTCAGCTTGCAGTGTAATTCAGAAGAGTTAAGACCAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000471658.5 ENST00000492741.5 ENST00000497722.2 ENST00000635251.1 ENST00000635562.1 |
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| CDS TCA 72 bp | CTCCATCAGAAAAAGACTCTTACCCTAGTAAGACCTTaGTCAATGTTCTTCAAAGAGCACATACCCAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LHQKKTLTLVRP*SMFFKEHIPKT Trigger: TGTTTTGGGTATGTGCTCTTTGAAGAACATTGATCAAGGTCTTACTAGGGTAAGAGTCTTTTTCTGATGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS CAA 72 bp | TCCAAAAATATTGGAAATCATTACCCTAGATCAGTGTaGTTAAAACCCATTTGGGACTCAATTTGCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SKNIGNHYPRSV*LKPIWDSICLR Trigger: TCTCAGGCAAATTGAGTCCCAAATGGGTTTTAACAACACTGATCTAGGGTAATGATTTCCAATATTTTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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| CDS TCA 72 bp | GTAATTGAGGTTTCGATACCATGTAGTGCTGCGTGCTaGTTATTTCCATTCAGTAAGGATTTTCTTTTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: VIEVSIPCSAAC*LFPFSKDFLFN Trigger: ATTAAAAAGAAAATCCTTACTGAATGGAAATAATCAGCACGCAGCACTACATGGTATCGAAACCTCAATTAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635251.1 |
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