Pregenerated sensors for PSORS1C3 (Homo sapiens)
Ensembl gene IDs: ENSG00000226422Ensembl transcript IDs: ENST00000376242.2, ENST00000412143.1, ENST00000414348.1, ENST00000425066.1, ENST00000428067.1, ENST00000444400.1, ENST00000450562.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGGCTCTGGCCTTCAGTCTGAGAACCAGCTTCTCCCAAGCTCTTaGGTCCCTGGCCTGAGCCCAGGATGCACGGGGCTCTGCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: LGSGLQSENQLLPSS*VPGLSPGCTGLCPP Trigger: AGGTGGGCAGAGCCCCGTGCATCCTGGGCTCAGGCCAGGGACCCAAGAGCTTGGGAGAAGCTGGTTCTCAGACTGAAGGCCAGAGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000376242.2 ENST00000412143.1 ENST00000414348.1 ENST00000425066.1 ENST00000428067.1 ENST00000444400.1 ENST00000450562.1 |
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| CDS GCA 90 bp | TGGCCTGAGCCCAGGATGCACGGGGCTCTGCCCACCTGCCCTCCTTaGAGCATCATAAGAAAGGGTGGTCATCCAGGTAGCCTGAGACTT | + |
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Preference number: 5 (lower is better) Translates to: WPEPRMHGALPTCPP*SIIRKGGHPGSLRL Trigger: AAGTCTCAGGCTACCTGGATGACCACCCTTTCTTATGATGCTGCAAGGAGGGCAGGTGGGCAGAGCCCCGTGCATCCTGGGCTCAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000376242.2 ENST00000412143.1 ENST00000414348.1 ENST00000425066.1 ENST00000428067.1 ENST00000444400.1 ENST00000450562.1 |
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| CDS CCA 72 bp | GGCCTTCAGTCTGAGAACCAGCTTCTCCCAAGCTCTTaGGTCCCTGGCCTGAGCCCAGGATGCACGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GLQSENQLLPSS*VPGLSPGCTGL Trigger: GAGCCCCGTGCATCCTGGGCTCAGGCCAGGGACCCAAGAGCTTGGGAGAAGCTGGTTCTCAGACTGAAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000376242.2 ENST00000412143.1 ENST00000414348.1 ENST00000425066.1 ENST00000428067.1 ENST00000444400.1 ENST00000450562.1 |
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| CDS GCA 72 bp | CCCAGGATGCACGGGGCTCTGCCCACCTGCCCTCCTTaGAGCATCATAAGAAAGGGTGGTCATCCAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PRMHGALPTCPP*SIIRKGGHPGS Trigger: GCTACCTGGATGACCACCCTTTCTTATGATGCTGCAAGGAGGGCAGGTGGGCAGAGCCCCGTGCATCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000376242.2 ENST00000412143.1 ENST00000414348.1 ENST00000425066.1 ENST00000428067.1 ENST00000444400.1 ENST00000450562.1 |
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| CDS CAA 72 bp | GACTTGCTCTCGACCCGGTCTAGGAAACCACTTATTTaGACTTCCGAGGCCTGTCAATCTCAAATAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: DLLSTRSRKPLI*TSEACQSQIEE Trigger: CTCCTCTATTTGAGATTGACAGGCCTCGGAAGTCAAAATAAGTGGTTTCCTAGACCGGGTCGAGAGCAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376242.2 ENST00000412143.1 ENST00000414348.1 ENST00000425066.1 ENST00000428067.1 ENST00000444400.1 ENST00000450562.1 |
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| CDS CAA 90 bp | ACCAATAGAGACTTGCTCTCGACCCGGTCTAGGAAACCACTTATTTaGACTTCCGAGGCCTGTCAATCTCAAATAGAGGAGTCAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: TNRDLLSTRSRKPLI*TSEACQSQIEESTL Trigger: GAGAGTTGACTCCTCTATTTGAGATTGACAGGCCTCGGAAGTCAAAATAAGTGGTTTCCTAGACCGGGTCGAGAGCAAGTCTCTATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376242.2 ENST00000412143.1 ENST00000414348.1 ENST00000425066.1 ENST00000428067.1 ENST00000444400.1 ENST00000450562.1 |
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