Pregenerated sensors for PSMG2 (Homo sapiens)
Ensembl gene IDs: ENSG00000128789Ensembl transcript IDs: ENST00000317615.11, ENST00000400512.1, ENST00000400514.2, ENST00000585331.6, ENST00000585853.2, ENST00000586445.5, ENST00000586587.1, ENST00000588824.1, ENST00000589405.5, ENST00000590217.5
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGGGGAAGACCACTGCCAAAGAGTAATCTCCAAGAACTTGGTATTTTCCACCGTGATGTTGTCCCCTTCTaGAACAAATTTCAGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GGRPLPKSNLQELGIFHRDVVPF*NKFQQN Trigger: GTTCTGCTGAAATTTGTTTCAGAAGGGGACAACATC...ACGGTGGAAAATACCAAGTTCTTGGAGATTACTCTTTGGCAGTGGTCTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| 3UTR CAA 90 bp | AGCCACTCATTAAGATACTCAACAAGACCTAATGCATCTGGGATGTaGTCCCCTTCTGAAACAAATTTCAGCAGAACTGCCATTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: SHSLRYSTRPNASGM*SPSETNFSRTAIWI Trigger: AATCCAAATGGCAGTTCTGCTGAAATTTGTTTCAGAAGGGGACAACATCCCAGATGCATTAGGTCTTGTTGAGTATCTTAATGAGTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAAGACCACTGCCAAAGAGTAATCTCCAAGAACTTGGTATTTTCCACCGTTGTTTAACAGCTGTGTaGGTAGTAAGTGTTTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: GGRPLPKSNLQELGIFHRCLTAV*VVSVLG Trigger: ACCCAAAACACTTACTACCAACACAGCTGTTAAACA...ACGGTGGAAAATACCAAGTTCTTGGAGATTACTCTTTGGCAGTGGTCTTCCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| 3UTR TCA 72 bp | GATACTGTGGGGTCATCGCTAAGTGGTTTGAGTATCTaGAGCCACTCATTAAGATACTCAACAAGACCTAAT | + |
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Preference number: 3 (lower is better) Translates to: DTVGSSLSGLSI*SHSLRYSTRPN Trigger: ATTAGGTCTTGTTGAGTATCTTAATGAGTGGCTTCAGATACTCAAACCACTTAGCGATGACCCCACAGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| 3UTR-3UTR CAA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCTGTTTAACAGCTGTGTaGGTAGTAAGTGTTTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPCLTAV*VVSVLG Trigger: ACCCAAAACACTTACTACCAACACAGCTGTTAAACA...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR TCA 90 bp | GGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTTTGAGTCTGGCATTAGGAGGGTaGAGCCGGCAAGGTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GIFHREADTVGSSLSGLSLALGG*SRQGRG Trigger: CCCCCGACCTTGCCGGCTTCACCCTCCTAATGCCAG...ACTCAAACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CCA 90 bp | GGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTTTGAGTATGGTCGCAGTGGGGTaGCCAGCAGGGACTAACCGC | + |
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Preference number: 4 (lower is better) Translates to: GIFHREADTVGSSLSGLSMVAVG*PAGTNR Trigger: GCGGTTAGTCCCTGCTGGCCACCCCACTGCGACCAT...ACTCAAACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR TCA 90 bp | GGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTTTGAGTTGGTATTTTCCACCGTaGGGCAGATACTGTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GIFHREADTVGSSLSGLSWYFPP*GRYCGV Trigger: GACCCCACAGTATCTGCCTCACGGTGGAAAATACCA...ACTCAAACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR GCA 90 bp | GAACTTGGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTATTAGATCAGAAAAGTaGAGGGGGAAGACCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: ELGIFHREADTVGSSLSGIRSEK*RGKTTA Trigger: GGCAGTGGTCTTCCCCCTGCACTTTTCTGATCTAAT...ACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR TCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCCTGGCATTAGGAGGGTaGAGCCGGCAAGGTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPLALGG*SRQGRG Trigger: CCCCCGACCTTGCCGGCTTCACCCTCCTAATGCCAG...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317615.11 |
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| CDS-3UTR GCA 90 bp | CAGAAATTAGATCAGAAAAGTGCAGGGGGAAGACCACTGCCAAAGAGTAATCTCCAGGGGGAAGACCACTaGCAAAGAGTAATCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKLDQKSAGGRPLPKSNLQGEDH*QRVISK Trigger: CTTGGAGATTACTCTTTGGCAGTGGTCTTCCCCCTG...GAGATTACTCTTTGGCAGTGGTCTTCCCCCTGCACTTTTCTGATCTAATTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCATGGTCGCAGTGGGGTaGCCAGCAGGGACTAACCGC | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPMVAVG*PAGTNR Trigger: GCGGTTAGTCCCTGCTGGCCACCCCACTGCGACCAT...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317615.11 |
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| CDS-3UTR CCA 90 bp | CTTGGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTTTGAGATCCATTGCAAGCTaGCCAACATTTCCAACAGAT | + |
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Preference number: 4 (lower is better) Translates to: LGIFHREADTVGSSLSGLRSIAS*PTFPTD Trigger: ATCTGTTGGAAATGTTGGCCAGCTTGCAATGGATCT...CAAACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CCA 90 bp | GAACTTGGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTTTCTGTGGTCGCATATaGATTGTTTCCAACCATTGG | + |
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Preference number: 4 (lower is better) Translates to: ELGIFHREADTVGSSLSGFCGRI*IVSNHW Trigger: CCAATGGTTGGAAACAATCCATATGCGACCACAGAA...ACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR TCA 90 bp | CTTGGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTTTGAGTGGTTTGAGTATCTaGAGCCACTCATTAAGATAC | + |
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Preference number: 4 (lower is better) Translates to: LGIFHREADTVGSSLSGLSGLSI*SHSLRY Trigger: GTATCTTAATGAGTGGCTTCAGATACTCAAACCACT...CAAACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CCA 90 bp | CAGAAATTAGATCAGAAAAGTGCAGGGGGAAGACCACTGCCAAAGAGTAATCTCGGGGTCATCGCTAAGTaGTTTGAGTATCTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKLDQKSAGGRPLPKSNLGVIAK*FEYLKP Trigger: TGGCTTCAGATACTCAAACCACTTAGCGATGACCCC...GAGATTACTCTTTGGCAGTGGTCTTCCCCCTGCACTTTTCTGATCTAATTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR TCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCCAGATACTGCTGGCCTaGAGATGGGAGTGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPQILLA*RWEWRG Trigger: CCCTCTCCACTCCCATCTTCAGGCCAGCAGTATCTG...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585331.6 |
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| CDS-3UTR CCA 90 bp | GGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTTTGAGTTTGAATTTCCTTCTGTaGTCGCATATGGATTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIFHREADTVGSSLSGLSLNFLL*SHMDCF Trigger: GAAACAATCCATATGCGACCACAGAAGGAAATTCAA...ACTCAAACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR TCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCTGGTATTTTCCACCGTaGGGCAGATACTGTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPWYFPP*GRYCGV Trigger: GACCCCACAGTATCTGCCTCACGGTGGAAAATACCA...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR TCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCTGCTTGAAAGAACAATaGCTCTGGCACAGCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPCLKEQ*LWHSHC Trigger: GCAGTGGCTGTGCCAGAGTCATTGTTCTTTCAAGCA...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR GCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCCAGGGGGAAGACCACTaGCAAAGAGTAATCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPQGEDH*QRVISK Trigger: CTTGGAGATTACTCTTTGGCAGTGGTCTTCCCCCTG...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCTCCAACAGATACTGCTaGCCTGAAGATGGGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPSNRYC*PEDGSG Trigger: TCCACTCCCATCTTCAGGCCAGCAGTATCTGTTGGA...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585331.6 |
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| CDS-3UTR TCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCCATAGAGTGTTTTTGTaGTACCTCCTCCCGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPHRVFL*YLLPEC Trigger: GCATTCCGGGAGGAGGTATCACAAAAACACTCTATG...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR GCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCTACCTCCTCCCGGAATaGGGATACAAAACTCGGAAT | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPYLLPE*GYKTRN Trigger: ATTCCGAGTTTTGTATCCGCATTCCGGGAGGAGGTA...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR GCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCATTAGATCAGAAAAGTaGAGGGGGAAGACCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPIRSEK*RGKTTA Trigger: GGCAGTGGTCTTCCCCCTGCACTTTTCTGATCTAAT...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCGGGGTCATCGCTAAGTaGTTTGAGTATCTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPGVIAK*FEYLKP Trigger: TGGCTTCAGATACTCAAACCACTTAGCGATGACCCC...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR TCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCGATGTTGTCCCCTTCTaGAACAAATTTCAGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPDVVPF*NKFQQN Trigger: GTTCTGCTGAAATTTGTTTCAGAAGGGGACAACATC...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCAGATCCATTGCAAGCTaGCCAACATTTCCAACAGAT | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPRSIAS*PTFPTD Trigger: ATCTGTTGGAAATGTTGGCCAGCTTGCAATGGATCT...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCTTCTGTGGTCGCATATaGATTGTTTCCAACCATTGG | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPFCGRI*IVSNHW Trigger: CCAATGGTTGGAAACAATCCATATGCGACCACAGAA...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR TCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCAGTGGTTTGAGTATCTaGAGCCACTCATTAAGATAC | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPSGLSI*SHSLRY Trigger: GTATCTTAATGAGTGGCTTCAGATACTCAAACCACT...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCATTGTTTCCAACCATTaGCACAAGACAATCGGTATA | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPIVSNH*HKTIGI Trigger: TATACCGATTGTCTTGTGCCAATGGTTGGAAACAAT...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CCA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCTTGAATTTCCTTCTGTaGTCGCATATGGATTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPLNFLL*SHMDCF Trigger: GAAACAATCCATATGCGACCACAGAAGGAAATTCAA...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS CCA 90 bp | CAAGGTCGGGGGCCGACTCCCCGCAGGGAACGAACATGGTCGCAGTaGGGTGGCCAGCAGGGACTAACCGCGGCCCTGGCAAGAACGAGG | + |
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Preference number: 5 (lower is better) Translates to: QGRGPTPRRERTWSQ*GGQQGLTAALARTR Trigger: CCTCGTTCTTGCCAGGGCCGCGGTTAGTCCCTGCTGGCCACCCCACTGCGACCATGTTCGTTCCCTGCGGGGAGTCGGCCCCCGACCTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000317615.11 ENST00000586587.1 ENST00000590217.5 |
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| CDS-3UTR CAA 90 bp | GGGGGAAGACCACTGCCAAAGAGTAATCTCCAAGAACTTGGTATTTTCCACCGTGTGGTCGCATATGGATaGTTTCCAACCATTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: GGRPLPKSNLQELGIFHRVVAYG*FPTIGT Trigger: TGTGCCAATGGTTGGAAACAATCCATATGCGACCAC...ACGGTGGAAAATACCAAGTTCTTGGAGATTACTCTTTGGCAGTGGTCTTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CAA 90 bp | GAACTTGGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTCAGCAGAACTGCCATTaGGATTTCTTTAGAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: ELGIFHREADTVGSSLSGQQNCH*DFFRTA Trigger: AGCTGTTCTAAAGAAATCCAAATGGCAGTTCTGCTG...ACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CAA 90 bp | GAACTTGGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTAATGCATCTGGGATGTaGTCCCCTTCTGAAACAAAT | + |
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Preference number: 5 (lower is better) Translates to: ELGIFHREADTVGSSLSGNASGM*SPSETN Trigger: ATTTGTTTCAGAAGGGGACAACATCCCAGATGCATT...ACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CAA 90 bp | GAACTTGGTATTTTCCACCGTGAGGCAGATACTGTGGGGTCATCGCTAAGTGGTTGTTTAACAGCTGTGTaGGTAGTAAGTGTTTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: ELGIFHREADTVGSSLSGCLTAV*VVSVLG Trigger: ACCCAAAACACTTACTACCAACACAGCTGTTAAACA...ACCACTTAGCGATGACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CAA 90 bp | CAGAAATTAGATCAGAAAAGTGCAGGGGGAAGACCACTGCCAAAGAGTAATCTCGTAATCTCCAAGAACTaGGTATTTTCCACCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: QKLDQKSAGGRPLPKSNLVISKN*VFSTVR Trigger: CCTCACGGTGGAAAATACCAAGTTCTTGGAGATTAC...GAGATTACTCTTTGGCAGTGGTCTTCCCCCTGCACTTTTCTGATCTAATTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CAA 90 bp | CAGAAATTAGATCAGAAAAGTGCAGGGGGAAGACCACTGCCAAAGAGTAATCTCGATTGTTTCCAACCATaGGCACAAGACAATCGGTAT | + |
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Preference number: 5 (lower is better) Translates to: QKLDQKSAGGRPLPKSNLDCFQP*AQDNRY Trigger: ATACCGATTGTCTTGTGCCAATGGTTGGAAACAATC...GAGATTACTCTTTGGCAGTGGTCTTCCCCCTGCACTTTTCTGATCTAATTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586587.1 |
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| CDS-3UTR CAA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCGTGGTCGCATATGGATaGTTTCCAACCATTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPVVAYG*FPTIGT Trigger: TGTGCCAATGGTTGGAAACAATCCATATGCGACCAC...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CAA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCGAGCCACCAGCTTTCTaGAAGGCAATGAATACACTT | + |
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Preference number: 5 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPEPPAF*KAMNTL Trigger: AAGTGTATTCATTGCCTTCAAGAAAGCTGGTGGCTC...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CAA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCGTAATCTCCAAGAACTaGGTATTTTCCACCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPVISKN*VFSTVR Trigger: CCTCACGGTGGAAAATACCAAGTTCTTGGAGATTAC...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CAA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCGATTGTTTCCAACCATaGGCACAAGACAATCGGTAT | + |
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Preference number: 5 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPDCFQP*AQDNRY Trigger: ATACCGATTGTCTTGTGCCAATGGTTGGAAACAATC...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CAA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCCAGCAGAACTGCCATTaGGATTTCTTTAGAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPQQNCH*DFFRTA Trigger: AGCTGTTCTAAAGAAATCCAAATGGCAGTTCTGCTG...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS-3UTR CAA 90 bp | ATTGTACAAAATTTACATTTGGTGCATATGATGAAAAGCATGGCAAAGAGACCCAATGCATCTGGGATGTaGTCCCCTTCTGAAACAAAT | + |
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Preference number: 5 (lower is better) Translates to: IVQNLHLVHMMKSMAKRPNASGM*SPSETN Trigger: ATTTGTTTCAGAAGGGGACAACATCCCAGATGCATT...GGGTCTCTTTGCCATGCTTTTCATCATATGCACCAAATGTAAATTTTGTACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317615.11 ENST00000585331.6 |
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| CDS GCA 72 bp | AGGGCCCAGGGCCCGGCGGGGAGGCTTCAGCGGGCCTaGATTTTCTTAGGCATCCGCTCCAGGCGGGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: RAQGPAGRLQRA*IFLGIRSRRVQ Trigger: TTGAACCCGCCTGGAGCGGATGCCTAAGAAAATGCAGGCCCGCTGAAGCCTCCCCGCCGGGCCCTGGGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000400512.1 ENST00000400514.2 ENST00000585853.2 |
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| CDS GCA 72 bp | TTGGAGGAGGAGGTAAACAGGAGCAGTGGTGCACTCTaGTGGCCTTTCTCTTGGAAGAGAAATGAGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LEEEVNRSSGAL*WPFSWKRNEVL Trigger: GAGAACCTCATTTCTCTTCCAAGAGAAAGGCCAGCAGAGTGCACCACTGCTCCTGTTTACCTCCTCCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589405.5 |
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| CDS CAA 72 bp | ACCCCATGGCTGCATGAAAAACCAGCCTTTCTGTCCTaGGCTACAGCAGATAAGGTATGTTCTGACCTACTC | + |
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Preference number: 6 (lower is better) Translates to: TPWLHEKPAFLS*ATADKVCSDLL Trigger: GAGTAGGTCAGAACATACCTTATCTGCTGTAGCCAAGGACAGAAAGGCTGGTTTTTCATGCAGCCATGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588824.1 |
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| CDS CAA 90 bp | TTCGAGCTGGACGGCTTCTTGATACTCCAAGGCAAGCAGCAAGATTaGTTAATGTCCTTGGTTATGAACGAGCCCCTGTTATTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: FELDGFLILQGKQQD*LMSLVMNEPLLLEE Trigger: CTCCTCCAATAACAGGGGCTCGTTCATAACCAAGGACATTAACAAATCTTGCTGCTTGCCTTGGAGTATCAAGAAGCCGTCCAGCTCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589405.5 |
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| CDS CAA 90 bp | GGCTTCTTGATACTCCAAGGCAAGCAGCAAGATTTGTTAATGTCCTaGGTTATGAACGAGCCCCTGTTATTGGAGGAGGAGGTAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: GFLILQGKQQDLLMS*VMNEPLLLEEEVNR Trigger: CCTGTTTACCTCCTCCTCCAATAACAGGGGCTCGTTCATAACCAAGGACATTAACAAATCTTGCTGCTTGCCTTGGAGTATCAAGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589405.5 |
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| CDS TCA 72 bp | ATTGCCACAGCCTTTGGAGTAAAACAGCTCAGAGCTTaGACCTGGCTCTGTTGCATAATAGCTGTAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: IATAFGVKQLRA*TWLCCIIAVAP Trigger: AGGAGCTACAGCTATTATGCAACAGAGCCAGGTTCAAGCTCTGAGCTGTTTTACTCCAAAGGCTGTGGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586445.5 |
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| CDS CAA 90 bp | GACCAGTCTGTTCCTATGTTAAACCACTTCGAGCTGGACGGCTTCTaGATACTCCAAGGCAAGCAGCAAGATTTGTTAATGTCCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: DQSVPMLNHFELDGF*ILQGKQQDLLMSLV Trigger: AACCAAGGACATTAACAAATCTTGCTGCTTGCCTTGGAGTATCAAGAAGCCGTCCAGCTCGAAGTGGTTTAACATAGGAACAGACTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589405.5 |
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| CDS CAA 72 bp | ATACTCCAAGGCAAGCAGCAAGATTTGTTAATGTCCTaGGTTATGAACGAGCCCCTGTTATTGGAGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: ILQGKQQDLLMS*VMNEPLLLEEE Trigger: CTCCTCCTCCAATAACAGGGGCTCGTTCATAACCAAGGACATTAACAAATCTTGCTGCTTGCCTTGGAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589405.5 |
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| CDS CAA 72 bp | GACGGCTTCTTGATACTCCAAGGCAAGCAGCAAGATTaGTTAATGTCCTTGGTTATGAACGAGCCCCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: DGFLILQGKQQD*LMSLVMNEPLL Trigger: TAACAGGGGCTCGTTCATAACCAAGGACATTAACAAATCTTGCTGCTTGCCTTGGAGTATCAAGAAGCCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589405.5 |
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| CDS CCA 72 bp | TCCTTCTGTGGTCGCATATGGATTGTTTCCAACCATTaGCACAAGACAATCGGTATAGAAGTAACCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: SFCGRIWIVSNH*HKTIGIEVTNL Trigger: AAGATTGGTTACTTCTATACCGATTGTCTTGTGCCAATGGTTGGAAACAATCCATATGCGACCACAGAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000317615.11 ENST00000585331.6 ENST00000586445.5 ENST00000586587.1 ENST00000590217.5 |
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| CDS CCA 72 bp | ACCTGCAAATTATGTACATGTTTATATTCCAGGCGCTaGTTTAGCTTTTGGGAGAAGTCAGTGAGGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: TCKLCTCLYSRR*FSFWEKSVRKT Trigger: GGTTTTCCTCACTGACTTCTCCCAAAAGCTAAACCAGCGCCTGGAATATAAACATGTACATAATTTGCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400514.2 |
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| CDS CAA 72 bp | TTCCTTCTGTGGTCGCATATGGATTGTTTCCAACCATaGGCACAAGACAATCGGTATAGAAGTAACCAATCT | + |
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Preference number: 6 (lower is better) Translates to: FLLWSHMDCFQP*AQDNRYRSNQS Trigger: AGATTGGTTACTTCTATACCGATTGTCTTGTGCCAATGGTTGGAAACAATCCATATGCGACCACAGAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000317615.11 ENST00000585331.6 ENST00000586445.5 ENST00000586587.1 ENST00000590217.5 |
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