Pregenerated sensors for PSMG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000183527Ensembl transcript IDs: ENST00000331573.8, ENST00000380900.2, ENST00000411828.5, ENST00000431628.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACTCGGAAGACCGCGGAGCCCCGGCCTTAGGCGCCGTCGCGGCTaGCAGGCCCGCGCACCTTCCAGCTGCGGTGAGCGCGCTGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PLGRPRSPGLRRRRG*QARAPSSCGERAAL Trigger: AAGGGCAGCGCGCTCACCGCAGCTGGAAGGTGCGCGGGCCTGGCAGCCGCGACGGCGCCTAAGGCCGGGGCTCCGCGGTCTTCCGAGTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR CCA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTaGGAAAGTCTGGGTGAAGAGGCTATCTGTCAGATATTACTAAAA | + |
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Preference number: 1 (lower is better) Translates to: KRTADTRRASLEREP*ESLGEEAICQILLK Trigger: TTTTAGTAATATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| 3UTR TCA 90 bp | GTACTATATTCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTTaGAATTCTGTGTTTTTAGGGCTCTCAGGAAAGGAGAAGGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: VLYSVVLAMDNTPSL*NSVFLGLSGKEKEG Trigger: GCCTTCCTTCTCCTTTCCTGAGAGCCCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGAATATAGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| 3UTR-3UTR GCA 90 bp | GATGTTTTTGTTTGTCTTCGAAGGAGCCGCACTTCCCTGGGGCTGGCGCCGCTGCGCGCACCTTCCAGCTaGGGTGAGCGCGCTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: DVFVCLRRSRTSLGLAPLRAPSS*GERAAL Trigger: AAGGGCAGCGCGCTCACCGCAGCTGGAAGGTGCGCG...CAGCGGCGCCAGCCCCAGGGAAGTGCGGCTCCTTCGAAGACAAACAAAAACATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAAGGTCGTGTACTATATTCGGTTGTTCTAGCAATGGACAACACGCCGAGTGGGGCTGGCGCCGCTaGACGCCGCGGCTTCACGGA | + |
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Preference number: 2 (lower is better) Translates to: AGRSCTIFGCSSNGQHAEWGWRR*TPRLHG Trigger: TCCGTGAAGCCGCGGCGTCCAGCGGCGCCAGCCCCA...CTCGGCGTGTTGTCCATTGCTAGAACAACCGAATATAGTACACGACCTTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR-3UTR GCA 90 bp | GTAAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAACCGAGGCGGGGGAAATaGTTGAGCCCAGGAGGTCGA | + |
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Preference number: 2 (lower is better) Translates to: VRELLTRAEPALKESPGKPRRGK*LSPGGR Trigger: TCGACCTCCTGGGCTCAAGCATTTCCCCCGCCTCGG...TTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCGACATGTGAGAATAGTTATCTGCATGTTCTTCCTTGGACAAGAGCCAAAAGGAGCCGCACTTCCCTaGGGCTGGCGCCGCTGGACG | + |
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Preference number: 2 (lower is better) Translates to: CRHVRIVICMFFLGQEPKGAALP*GWRRWT Trigger: CGTCCAGCGGCGCCAGCCCCAGGGAAGTGCGGCTCC...TTTTGGCTCTTGTCCAAGGAAGAACATGCAGATAACTATTCTCACATGTCGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCTTAGAACTGCTGCAGGAAGGTCGTGTACTATATTCGGTTGTTCTAGCAACCTTCCAGCTGCGGTaGGCGCGCTGCCCTTATCCC | + |
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Preference number: 2 (lower is better) Translates to: SSLELLQEGRVLYSVVLATFQLR*ARCPYP Trigger: GGGATAAGGGCAGCGCGCTCACCGCAGCTGGAAGGT...TGCTAGAACAACCGAATATAGTACACGACCTTCCTGCAGCAGTTCTAAGCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR-3UTR TCA 90 bp | GAGCCCTGGGAAAGTCTGGGTGAAGAGGCTATCTGTCAGATATTACTAAAAAGTGGCGGGGGAAATGCTTaGGCCCAGGAGGTCGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: EPWESLGEEAICQILLKSGGGNA*AQEVED Trigger: ATCCTCGACCTCCTGGGCTCAAGCATTTCCCCCGCC...ACTTTTTAGTAATATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAGGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAAGGTCGTGTACTATATTCGGTTGTTCTAGCAATGGACAACACGCCGAGGTGAGAATAGTTATCTaGATGTTCTTCCTTGGACAA | + |
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Preference number: 2 (lower is better) Translates to: AGRSCTIFGCSSNGQHAEVRIVI*MFFLGQ Trigger: TTGTCCAAGGAAGAACATGCAGATAACTATTCTCAC...CTCGGCGTGTTGTCCATTGCTAGAACAACCGAATATAGTACACGACCTTCCTGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| 3UTR CAA 90 bp | TGTACTATATTCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTaGAAATTCTGTGTTTTTAGGGCTCTCAGGAAAGGAGAAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: CTIFGCSSNGQHAES*KFCVFRALRKGEGR Trigger: CCTTCCTTCTCCTTTCCTGAGAGCCCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGAATATAGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCTGGGAAAGTCTGGGTGAAGAGGCTATCTGTCAGATATTACTAAAAAGTCTCCCCTTAAAGGAATaGACAAGTAATATACACTAC | + |
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Preference number: 2 (lower is better) Translates to: EPWESLGEEAICQILLKSLPLKE*TSNIHY Trigger: GTAGTGTATATTACTTGTCCATTCCTTTAAGGGGAG...ACTTTTTAGTAATATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAGGGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTTGGGGAATATTCTTAACCAAACCCTTCAAGCTTCTGGTAGAAAGTATACAAGTACAGAATTGCTaGGATTTTCCATACTTGACA | + |
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Preference number: 2 (lower is better) Translates to: VLWGIFLTKPFKLLVESIQVQNC*DFPYLT Trigger: TGTCAAGTATGGAAAATCCCAGCAATTCTGTACTTG...TATACTTTCTACCAGAAGCTTGAAGGGTTTGGTTAAGAATATTCCCCAAAGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| 3UTR GCA 72 bp | AGACCGCGGAGCCCCGGCCTTAGGCGCCGTCGCGGCTaGCAGGCCCGCGCACCTTCCAGCTGCGGTGAGCGC | + |
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Preference number: 3 (lower is better) Translates to: RPRSPGLRRRRG*QARAPSSCGER Trigger: GCGCTCACCGCAGCTGGAAGGTGCGCGGGCCTGGCAGCCGCGACGGCGCCTAAGGCCGGGGCTCCGCGGTCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR CCA 72 bp | TTCGAAGGAGCCGCACTTCCCTGGGGCTGGCGCCGCTaGACGCCGCGGCTTCACGGAGACCCAGGGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: FEGAALPWGWRR*TPRLHGDPGPK Trigger: CTTGGGCCCTGGGTCTCCGTGAAGCCGCGGCGTCCAGCGGCGCCAGCCCCAGGGAAGTGCGGCTCCTTCGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR-3UTR CAA 90 bp | GTAAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAAGGCGGGGGAAATGCTaGAGCCCAGGAGGTCGAGGA | + |
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Preference number: 3 (lower is better) Translates to: VRELLTRAEPALKESPGKRRGKC*SPGGRG Trigger: TCCTCGACCTCCTGGGCTCAAGCATTTCCCCCGCCT...TTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| 3UTR CCA 72 bp | GCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTaGGAAAGTCTGGGTGAAGAGGCTATCTGTCAGATA | + |
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Preference number: 3 (lower is better) Translates to: ADTRRASLEREP*ESLGEEAICQI Trigger: TATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| 3UTR TCA 72 bp | TCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTTaGAATTCTGTGTTTTTAGGGCTCTCAGGAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SVVLAMDNTPSL*NSVFLGLSGKE Trigger: CTCCTTTCCTGAGAGCCCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| 3UTR-3UTR CAA 90 bp | AGTAGCTTAGAACTGCTGCAGGAAGGTCGTGTACTATATTCGGTTGTTCTAGCACAACACGCCGAGTCTTaGAAATTCTGTGTTTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: SSLELLQEGRVLYSVVLAQHAES*KFCVFR Trigger: CCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTG...TGCTAGAACAACCGAATATAGTACACGACCTTCCTGCAGCAGTTCTAAGCTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| 3UTR GCA 72 bp | GCCACTGATACTGTTGATCTTCTGCAACATAGCAACTaGACTGACAGAGAAAAACCGAGGGATTGGATTTTA | + |
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Preference number: 3 (lower is better) Translates to: ATDTVDLLQHSN*TDREKPRDWIL Trigger: TAAAATCCAATCCCTCGGTTTTTCTCTGTCAGTGCAGTTGCTATGTTGCAGAAGATCAACAGTATCAGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| 3UTR-3UTR CAA 90 bp | CAAACCCTTCAAGCTTCTGGTAGAAAGTATAGGCTTAAAAGCTTCCACTGTGATCAAAGATGTTTTTGTTaGTCTTCGAAGGAGCCGCAC | + |
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Preference number: 3 (lower is better) Translates to: QTLQASGRKYRLKSFHCDQRCFC*SSKEPH Trigger: GTGCGGCTCCTTCGAAGACAAACAAAAACATCTTTG...ATCACAGTGGAAGCTTTTAAGCCTATACTTTCTACCAGAAGCTTGAAGGGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAATTCTGTGTTTTTAGGGCTCTTCCAAAGATGTTTTaGTTTGTCTTCGAAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: CSSNGQHAESLKFCVFRALPKMF*FVFEGA Trigger: GGCTCCTTCGAAGACAAACAAAAACATCTTTGGAAG...AGCCCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR CCA 72 bp | TCGACATGTGAGAATAGTTATCTGCATGTTCTTCCTTaGACAAGAGCCAAAAACCTTTTCCAGCCACTGATA | + |
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Preference number: 3 (lower is better) Translates to: STCENSYLHVLP*TRAKNLFQPLI Trigger: TATCAGTGGCTGGAAAAGGTTTTTGGCTCTTGTCCAAGGAAGAACATGCAGATAACTATTCTCACATGTCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| 3UTR-3UTR CAA 90 bp | TTACACCTAATTAACTACACTTTGCCACATGAATACCATCTGCTGATATCTGTAAATGCTTGGCTTATTTaGGTTGTGAATAATACCACC | + |
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Preference number: 3 (lower is better) Translates to: LHLINYTLPHEYHLLISVNAWLI*VVNNTT Trigger: GGTGGTATTATTCACAACCAAAATAAGCCAAGCATT...TACAGATATCAGCAGATGGTATTCATGTGGCAAAGTGTAGTTAATTAGGTGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR CCA 90 bp | AGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTCCGCCCCGTGACCGGCTaGACACAACTGCAGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: RELLTRAEPALKESPGKVRPVTG*TQLQRR Trigger: GCGGCGCTGCAGTTGTGTCCAGCCGGTCACGGGGCG...GACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR CCA 90 bp | CTGGGGCTGGCGCCGCTGGACGCCGCGGCTTCACGGAGACCCAGGGCCCAAGCAAAGGAAGGCTGCCGGTaGATTCTGAGGTTTTATAAT | + |
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Preference number: 4 (lower is better) Translates to: LGLAPLDAAASRRPRAQAKEGCR*ILRFYN Trigger: ATTATAAAACCTCAGAATCCACCGGCAGCCTTCCTT...TGCTTGGGCCCTGGGTCTCCGTGAAGCCGCGGCGTCCAGCGGCGCCAGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| CDS-3UTR TCA 90 bp | GTAAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGCCATAGCCGCCCCGTaGCCGGCTGGACACAACTGC | + |
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Preference number: 4 (lower is better) Translates to: VRELLTRAEPALKESPGKAIAAP*PAGHNC Trigger: GCAGTTGTGTCCAGCCGGTCACGGGGCGGCTATGGC...TTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR GCA 90 bp | GTAAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAACTCTTCCGCGCCAGCTaGAGACGCACCTCCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VRELLTRAEPALKESPGKLFRAS*RRTSLS Trigger: GGACAGGGAGGTGCGTCTGCAGCTGGCGCGGAAGAG...TTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR TCA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTGGCGGGGGAAATGCTTaGGCCCAGGAGGTCGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: KRTADTRRASLEREPWESGGGNA*AQEVED Trigger: ATCCTCGACCTCCTGGGCTCAAGCATTTCCCCCGCC...ACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR TCA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTGCGCAGAGCCAGCCTTaGAAGAGAGCCCTGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KRTADTRRASLEREPWESAQSQP*KRALGK Trigger: CTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGC...ACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR GCA 90 bp | TTTTGTTTGTCTTCGAAGGAGCCGCACTTCCCTGGGGCTGGCGCCGCTGGACGCAAGGAGAAGGAAGGCTaGCGGTGGATTCTGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FCLSSKEPHFPGAGAAGRKEKEG*RWILRF Trigger: AAACCTCAGAATCCACCGGCAGCCTTCCTTCTCCTT...GCGTCCAGCGGCGCCAGCCCCAGGGAAGTGCGGCTCCTTCGAAGACAAACAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| CDS-3UTR CCA 90 bp | AACCTTTTCCAGCCACTGATACTGTTGATCTTCTGCAACATAGCAACTGCACTGTGGGGCTGGCGCCGCTaGACGCCGCGGCTTCACGGA | + |
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Preference number: 4 (lower is better) Translates to: NLFQPLILLIFCNIATALWGWRR*TPRLHG Trigger: TCCGTGAAGCCGCGGCGTCCAGCGGCGCCAGCCCCA...CAGTGCAGTTGCTATGTTGCAGAAGATCAACAGTATCAGTGGCTGGAAAAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| CDS-3UTR CCA 90 bp | GGTTGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAATTCTGTGTTTTTAGGGGAGCCGCACTTCCCTaGGGCTGGCGCCGCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: GCSSNGQHAESLKFCVFRGAALP*GWRRWT Trigger: CGTCCAGCGGCGCCAGCCCCAGGGAAGTGCGGCTCC...CCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| 3UTR CAA 72 bp | ACTGTAAGAGAACTGCTGACACGCGCAGAGCCAGCCTaGAAAGAGAGCCCTGGGAAAGTCTGGGTGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TVRELLTRAEPA*KESPGKVWVKR Trigger: CCTCTTCACCCAGACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTTACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR GCA 90 bp | CACGCCGAGTCTTTGAAATTCTGTGTTTTTAGGGCTCTCAGGAAAGGAGAAGGACTCTTCCGCGCCAGCTaGAGACGCACCTCCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HAESLKFCVFRALRKGEGLFRAS*RRTSLS Trigger: GGACAGGGAGGTGCGTCTGCAGCTGGCGCGGAAGAG...TCCTTCTCCTTTCCTGAGAGCCCTAAAAACACAGAATTTCAAAGACTCGGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| CDS-3UTR GCA 90 bp | TTAGAACTGCTGCAGGAAGGTCGTGTACTATATTCGGTTGTTCTAGCAATGGACCGCGCACCTTCCAGCTaGGGTGAGCGCGCTGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: LELLQEGRVLYSVVLAMDRAPSS*GERAAL Trigger: AAGGGCAGCGCGCTCACCGCAGCTGGAAGGTGCGCG...GTCCATTGCTAGAACAACCGAATATAGTACACGACCTTCCTGCAGCAGTTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| CDS-3UTR TCA 90 bp | AGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTCGCTGCCGGTGGATTCTaGGGTTTTATAATCGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: RELLTRAEPALKESPGKVAAGGF*GFIIGN Trigger: GTTACCGATTATAAAACCTCAGAATCCACCGGCAGC...GACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR TCA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTCTGGGAAAGTCTGGGTaGAGAGGCTATCTGTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: KRTADTRRASLEREPWESLGKSG*RGYLSD Trigger: ATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAG...ACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR GCA 90 bp | TGGACAAGAGCCAAAAACCTTTTCCAGCCACTGATACTGTTGATCTTCTGCAACCTCTTCCGCGCCAGCTaGAGACGCACCTCCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: WTRAKNLFQPLILLIFCNLFRAS*RRTSLS Trigger: GGACAGGGAGGTGCGTCTGCAGCTGGCGCGGAAGAG...GTTGCAGAAGATCAACAGTATCAGTGGCTGGAAAAGGTTTTTGGCTCTTGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
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| CDS-3UTR GCA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTAAGGAGAAGGAAGGCTaGCGGTGGATTCTGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: KRTADTRRASLEREPWESKEKEG*RWILRF Trigger: AAACCTCAGAATCCACCGGCAGCCTTCCTTCTCCTT...ACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAATTCTGTGTTTTTAGGGCTACCTTCCAGCTGCGGTaGGCGCGCTGCCCTTATCCC | + |
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Preference number: 4 (lower is better) Translates to: CSSNGQHAESLKFCVFRATFQLR*ARCPYP Trigger: GGGATAAGGGCAGCGCGCTCACCGCAGCTGGAAGGT...AGCCCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| CDS-3UTR GCA 90 bp | GAGCCCTGGGAAAGTCTGGGTGAAGAGGCTATCTGTCAGATATTACTAAAAAGTCCGAGGCGGGGGAAATaGTTGAGCCCAGGAGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: EPWESLGEEAICQILLKSPRRGK*LSPGGR Trigger: TCGACCTCCTGGGCTCAAGCATTTCCCCCGCCTCGG...ACTTTTTAGTAATATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAGGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR GCA 90 bp | TTACACCTAATTAACTACACTTTGCCACATGAATACCATCTGCTGATATCTGTACCGGCTGGACACAACTaGAGCGCCGCGGGACCGCAC | + |
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Preference number: 4 (lower is better) Translates to: LHLINYTLPHEYHLLISVPAGHN*SAAGPH Trigger: GTGCGGTCCCGCGGCGCTGCAGTTGTGTCCAGCCGG...TACAGATATCAGCAGATGGTATTCATGTGGCAAAGTGTAGTTAATTAGGTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR GCA 90 bp | GCTTTGGGGAATATTCTTAACCAAACCCTTCAAGCTTCTGGTAGAAAGTATAGGCTGCCCTTATCCCGGTaGCTCACCTCTTCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: ALGNILNQTLQASGRKYRLPLSR*LTSSAP Trigger: TGGCGCGGAAGAGGTGAGGCACCGGGATAAGGGCAG...CCTATACTTTCTACCAGAAGCTTGAAGGGTTTGGTTAAGAATATTCCCCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411828.5 |
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| CDS-3UTR GCA 90 bp | GTAAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAATACTGTTGATCTTCTaGAACATAGCAACTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: VRELLTRAEPALKESPGKILLIF*NIATAL Trigger: CAGTGCAGTTGCTATGTTGCAGAAGATCAACAGTAT...TTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR GCA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTGTGAGAATAGTTATCTaGATGTTCTTCCTTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: KRTADTRRASLEREPWESVRIVI*MFFLGQ Trigger: TTGTCCAAGGAAGAACATGCAGATAACTATTCTCAC...ACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
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| CDS-3UTR CCA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTCTCCCCTTAAAGGAATaGACAAGTAATATACACTAC | + |
|
Preference number: 4 (lower is better) Translates to: KRTADTRRASLEREPWESLPLKE*TSNIHY Trigger: GTAGTGTATATTACTTGTCCATTCCTTTAAGGGGAG...ACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCCTTCAAGCTTCTGGTAGAAAGTATAGGCTTAAAAGCTTCCACTGTGATAAGGAGAAGGAAGGCTaGCGGTGGATTCTGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLQASGRKYRLKSFHCDKEKEG*RWILRF Trigger: AAACCTCAGAATCCACCGGCAGCCTTCCTTCTCCTT...ATCACAGTGGAAGCTTTTAAGCCTATACTTTCTACCAGAAGCTTGAAGGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| 3UTR CAA 72 bp | ACAAGAGCCAAAAACCTTTTCCAGCCACTGATACTGTaGATCTTCTGCAACATAGCAACTGCACTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRAKNLFQPLIL*IFCNIATALTE Trigger: CTCTGTCAGTGCAGTTGCTATGTTGCAGAAGATCAACAGTATCAGTGGCTGGAAAAGGTTTTTGGCTCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| 3UTR CAA 72 bp | TTCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTaGAAATTCTGTGTTTTTAGGGCTCTCAGGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FGCSSNGQHAES*KFCVFRALRKG Trigger: TCCTTTCCTGAGAGCCCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR TCA 90 bp | TGTCGACATGTGAGAATAGTTATCTGCATGTTCTTCCTTGGACAAGAGCCAAAAGCTGCCGGTGGATTCTaGGGTTTTATAATCGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CRHVRIVICMFFLGQEPKAAGGF*GFIIGN Trigger: GTTACCGATTATAAAACCTCAGAATCCACCGGCAGC...TTTTGGCTCTTGTCCAAGGAAGAACATGCAGATAACTATTCTCACATGTCGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR TCA 90 bp | TTCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAATTCTGTGTTTTTGCTGCCGGTGGATTCTaGGGTTTTATAATCGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FGCSSNGQHAESLKFCVFAAGGF*GFIIGN Trigger: GTTACCGATTATAAAACCTCAGAATCCACCGGCAGC...AAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR CCA 90 bp | GAGCCCTGGGAAAGTCTGGGTGAAGAGGCTATCTGTCAGATATTACTAAAAAGTAAGGAAGGCTGCCGGTaGATTCTGAGGTTTTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: EPWESLGEEAICQILLKSKEGCR*ILRFYN Trigger: ATTATAAAACCTCAGAATCCACCGGCAGCCTTCCTT...ACTTTTTAGTAATATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAGGGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGCTTAGAACTGCTGCAGGAAGGTCGTGTACTATATTCGGTTGTTCTAGCAAAGGAAGGCTGCCGGTaGATTCTGAGGTTTTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLELLQEGRVLYSVVLAKEGCR*ILRFYN Trigger: ATTATAAAACCTCAGAATCCACCGGCAGCCTTCCTT...TGCTAGAACAACCGAATATAGTACACGACCTTCCTGCAGCAGTTCTAAGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR GCA 90 bp | CAAAAACCTTTTCCAGCCACTGATACTGTTGATCTTCTGCAACATAGCAACTGCGTGAGAATAGTTATCTaGATGTTCTTCCTTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QKPFPATDTVDLLQHSNCVRIVI*MFFLGQ Trigger: TTGTCCAAGGAAGAACATGCAGATAACTATTCTCAC...GCAGTTGCTATGTTGCAGAAGATCAACAGTATCAGTGGCTGGAAAAGGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR GCA 90 bp | TCGTGTACTATATTCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAAACACAAGTACAGAATTaGTGGGATTTTCCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCTIFGCSSNGQHAESLKTQVQN*WDFPYL Trigger: CAAGTATGGAAAATCCCAGCAATTCTGTACTTGTGT...TTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGAATATAGTACACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR GCA 90 bp | GCTTTGGGGAATATTCTTAACCAAACCCTTCAAGCTTCTGGTAGAAAGTATAGGGTGAGAATAGTTATCTaGATGTTCTTCCTTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGNILNQTLQASGRKYRVRIVI*MFFLGQ Trigger: TTGTCCAAGGAAGAACATGCAGATAACTATTCTCAC...CCTATACTTTCTACCAGAAGCTTGAAGGGTTTGGTTAAGAATATTCCCCAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR GCA 90 bp | TTCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAATTCTGTGTTTTTACACAAGTACAGAATTaGTGGGATTTTCCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGCSSNGQHAESLKFCVFTQVQN*WDFPYL Trigger: CAAGTATGGAAAATCCCAGCAATTCTGTACTTGTGT...AAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAATTCTGTGTTTTTAGGGCTAGTATCTCAGTGCTTTaGGGAATATTCTTAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSNGQHAESLKFCVFRASISVL*GIFLTK Trigger: TTTGGTTAAGAATATTCCCCAAAGCACTGAGATACT...AGCCCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR TCA 90 bp | TTACACCTAATTAACTACACTTTGCCACATGAATACCATCTGCTGATATCTGTAAACACGCCGAGTCTTTaGAATTCTGTGTTTTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHLINYTLPHEYHLLISVNTPSL*NSVFLG Trigger: CCCTAAAAACACAGAATTTCAAAGACTCGGCGTGTT...TACAGATATCAGCAGATGGTATTCATGTGGCAAAGTGTAGTTAATTAGGTGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CCA 90 bp | TTCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAATTCTGTGTTTTTAGTATCTCAGTGCTTTaGGGAATATTCTTAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FGCSSNGQHAESLKFCVFSISVL*GIFLTK Trigger: TTTGGTTAAGAATATTCCCCAAAGCACTGAGATACT...AAAAACACAGAATTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR GCA 90 bp | TTACACCTAATTAACTACACTTTGCCACATGAATACCATCTGCTGATATCTGTAACACAAGTACAGAATTaGTGGGATTTTCCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLINYTLPHEYHLLISVTQVQN*WDFPYL Trigger: CAAGTATGGAAAATCCCAGCAATTCTGTACTTGTGT...TACAGATATCAGCAGATGGTATTCATGTGGCAAAGTGTAGTTAATTAGGTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CCA 90 bp | TTACACCTAATTAACTACACTTTGCCACATGAATACCATCTGCTGATATCTGTACAAGTACAGAATTGCTaGGATTTTCCATACTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LHLINYTLPHEYHLLISVQVQNC*DFPYLT Trigger: TGTCAAGTATGGAAAATCCCAGCAATTCTGTACTTG...TACAGATATCAGCAGATGGTATTCATGTGGCAAAGTGTAGTTAATTAGGTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CCA 90 bp | TTACACCTAATTAACTACACTTTGCCACATGAATACCATCTGCTGATATCTGTAAGTATCTCAGTGCTTTaGGGAATATTCTTAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHLINYTLPHEYHLLISVSISVL*GIFLTK Trigger: TTTGGTTAAGAATATTCCCCAAAGCACTGAGATACT...TACAGATATCAGCAGATGGTATTCATGTGGCAAAGTGTAGTTAATTAGGTGTAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS GCA 90 bp | GACCGGCTGGACACAACTGCAGCGCCGCGGGACCGCACGCCGGCTTaGGCGAGACCACGCTCCCTCACCGCGCGGGCAATAAGTCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRLDTTAAPRDRTPA*ARPRSLTARAISPA Trigger: GGCGGGACTTATTGCCCGCGCGGTGAGGGAGCGTGGTCTCGCGCAAGCCGGCGTGCGGTCCCGCGGCGCTGCAGTTGTGTCCAGCCGGTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380900.2 |
||
| CDS GCA 90 bp | GGCCTTAGGCGCCGTCGCGGCTGCCAGGCCCGCGCACCTTCCAGCTaGGGTGAGCGCGCTGCCCTTATCCCGGTGCCTCACCTCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GLRRRRGCQARAPSS*GERAALIPVPHLFR Trigger: GCGGAAGAGGTGAGGCACCGGGATAAGGGCAGCGCGCTCACCGCAGCTGGAAGGTGCGCGGGCCTGGCAGCCGCGACGGCGCCTAAGGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411828.5 |
||
| CDS TCA 90 bp | GCCTTCACCACCTCTCCGAAGAACGTGGCCGCCATAGCCGCCCCGTaGCCGGCTGGACACAACTGCAGCGCCGCGGGACCGCACGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AFTTSPKNVAAIAAP*PAGHNCSAAGPHAG Trigger: GCCGGCGTGCGGTCCCGCGGCGCTGCAGTTGTGTCCAGCCGGTCACGGGGCGGCTATGGCGGCCACGTTCTTCGGAGAGGTGGTGAAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331573.8 ENST00000380900.2 |
||
| CDS CCA 90 bp | CACCTCTCCGAAGAACGTGGCCGCCATAGCCGCCCCGTGACCGGCTaGACACAACTGCAGCGCCGCGGGACCGCACGCCGGCTTGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HLSEERGRHSRPVTG*TQLQRRGTARRLAR Trigger: TCGCGCAAGCCGGCGTGCGGTCCCGCGGCGCTGCAGTTGTGTCCAGCCGGTCACGGGGCGGCTATGGCGGCCACGTTCTTCGGAGAGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331573.8 ENST00000380900.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTCGCGCAGAGCCAGCCTaGAAAGAGAGCCCTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRTADTRRASLEREPWESRAEPA*KESPGK Trigger: TTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCG...ACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CAA 90 bp | GATGTTTTTGTTTGTCTTCGAAGGAGCCGCACTTCCCTGGGGCTGGCGCCGCTGCTTCCAAAGATGTTTTaGTTTGTCTTCGAAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DVFVCLRRSRTSLGLAPLLPKMF*FVFEGA Trigger: GGCTCCTTCGAAGACAAACAAAAACATCTTTGGAAG...CAGCGGCGCCAGCCCCAGGGAAGTGCGGCTCCTTCGAAGACAAACAAAAACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000411828.5 |
||
| CDS-3UTR CAA 90 bp | AGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTCCAACACGCCGAGTCTTaGAAATTCTGTGTTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RELLTRAEPALKESPGKVQHAES*KFCVFR Trigger: CCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTG...GACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTCTTCCAAAGATGTTTTaGTTTGTCTTCGAAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRTADTRRASLEREPWESLPKMF*FVFEGA Trigger: GGCTCCTTCGAAGACAAACAAAAACATCTTTGGAAG...ACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAGTCAACACAAGTACAGAATaGCTGGGATTTTCCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: RELLTRAEPALKESPGKVNTSTE*LGFSIL Trigger: AAGTATGGAAAATCCCAGCAATTCTGTACTTGTGTT...GACTTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGAGAACTGCTGACACGCGCAGAGCCAGCCTTGAAAGAGAGCCCTGGGAAAAATGCTTGGCTTATTTaGGTTGTGAATAATACCACC | + |
|
Preference number: 5 (lower is better) Translates to: VRELLTRAEPALKESPGKNAWLI*VVNNTT Trigger: GGTGGTATTATTCACAACCAAAATAAGCCAAGCATT...TTTCCCAGGGCTCTCTTTCAAGGCTGGCTCTGCGCGTGTCAGCAGTTCTCTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCCTGGGAAAGTCTGGGTGAAGAGGCTATCTGTCAGATATTACTAAAAAGTCAAAGATGTTTTTGTTaGTCTTCGAAGGAGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EPWESLGEEAICQILLKSQRCFC*SSKEPH Trigger: GTGCGGCTCCTTCGAAGACAAACAAAAACATCTTTG...ACTTTTTAGTAATATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAGGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAACCTTTTCCAGCCACTGATACTGTTGATCTTCTGCAACATAGCAACTGCCAAAGATGTTTTTGTTaGTCTTCGAAGGAGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QKPFPATDTVDLLQHSNCQRCFC*SSKEPH Trigger: GTGCGGCTCCTTCGAAGACAAACAAAAACATCTTTG...GCAGTTGCTATGTTGCAGAAGATCAACAGTATCAGTGGCTGGAAAAGGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000411828.5 |
||
| CDS-3UTR CAA 90 bp | AACCTTTTCCAGCCACTGATACTGTTGATCTTCTGCAACATAGCAACTGCACTGCAACACGCCGAGTCTTaGAAATTCTGTGTTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLFQPLILLIFCNIATALQHAES*KFCVFR Trigger: CCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTG...CAGTGCAGTTGCTATGTTGCAGAAGATCAACAGTATCAGTGGCTGGAAAAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR CAA 90 bp | CAAACCCTTCAAGCTTCTGGTAGAAAGTATAGGCTTAAAAGCTTCCACTGTGATCAACACGCCGAGTCTTaGAAATTCTGTGTTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTLQASGRKYRLKSFHCDQHAES*KFCVFR Trigger: CCTAAAAACACAGAATTTCAAAGACTCGGCGTGTTG...ATCACAGTGGAAGCTTTTAAGCCTATACTTTCTACCAGAAGCTTGAAGGGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR CAA 90 bp | GAGCCCTGGGAAAGTCTGGGTGAAGAGGCTATCTGTCAGATATTACTAAAAAGTCTAATTAACTACACTTaGCCACATGAATACCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPWESLGEEAICQILLKSLINYT*PHEYHL Trigger: CAGATGGTATTCATGTGGCAAAGTGTAGTTAATTAG...ACTTTTTAGTAATATCTGACAGATAGCCTCTTCACCCAGACTTTCCCAGGGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGTACTATATTCGGTTGTTCTAGCAATGGACAACACGCCGAGTCTTTGAAAAACACAAGTACAGAATaGCTGGGATTTTCCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: SCTIFGCSSNGQHAESLKNTSTE*LGFSIL Trigger: AAGTATGGAAAATCCCAGCAATTCTGTACTTGTGTT...TTTCAAAGACTCGGCGTGTTGTCCATTGCTAGAACAACCGAATATAGTACACGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS-3UTR CAA 90 bp | TTACACCTAATTAACTACACTTTGCCACATGAATACCATCTGCTGATATCTGTACAGCCACTGATACTGTaGATCTTCTGCAACATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHLINYTLPHEYHLLISVQPLIL*IFCNIA Trigger: TGCTATGTTGCAGAAGATCAACAGTATCAGTGGCTG...TACAGATATCAGCAGATGGTATTCATGTGGCAAAGTGTAGTTAATTAGGTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331573.8 |
||
| CDS-3UTR CAA 90 bp | TGTCGACATGTGAGAATAGTTATCTGCATGTTCTTCCTTGGACAAGAGCCAAAAAACACAAGTACAGAATaGCTGGGATTTTCCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: CRHVRIVICMFFLGQEPKNTSTE*LGFSIL Trigger: AAGTATGGAAAATCCCAGCAATTCTGTACTTGTGTT...TTTTGGCTCTTGTCCAAGGAAGAACATGCAGATAACTATTCTCACATGTCGACA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000411828.5 ENST00000431628.1 |
||
| CDS CCA 72 bp | GAAGAACGTGGCCGCCATAGCCGCCCCGTGACCGGCTaGACACAACTGCAGCGCCGCGGGACCGCACGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: EERGRHSRPVTG*TQLQRRGTARR Trigger: CCGGCGTGCGGTCCCGCGGCGCTGCAGTTGTGTCCAGCCGGTCACGGGGCGGCTATGGCGGCCACGTTCTTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331573.8 ENST00000380900.2 |
||
| CDS CAA 72 bp | GGACACAACTGCAGCGCCGCGGGACCGCACGCCGGCTaGCGCGAGACCACGCTCCCTCACCGCGCGGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GHNCSAAGPHAG*RETTLPHRAGN Trigger: ATTGCCCGCGCGGTGAGGGAGCGTGGTCTCGCGCAAGCCGGCGTGCGGTCCCGCGGCGCTGCAGTTGTGTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380900.2 |
||
| CDS GCA 72 bp | GACACAACTGCAGCGCCGCGGGACCGCACGCCGGCTTaGGCGAGACCACGCTCCCTCACCGCGCGGGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: DTTAAPRDRTPA*ARPRSLTARAI Trigger: TATTGCCCGCGCGGTGAGGGAGCGTGGTCTCGCGCAAGCCGGCGTGCGGTCCCGCGGCGCTGCAGTTGTGTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380900.2 |
||
| CDS TCA 72 bp | ACCTCTCCGAAGAACGTGGCCGCCATAGCCGCCCCGTaGCCGGCTGGACACAACTGCAGCGCCGCGGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: TSPKNVAAIAAP*PAGHNCSAAGP Trigger: CGGTCCCGCGGCGCTGCAGTTGTGTCCAGCCGGTCACGGGGCGGCTATGGCGGCCACGTTCTTCGGAGAGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331573.8 ENST00000380900.2 |
||
| CDS TCA 72 bp | TCGCGGCTGCCAGGCCCGCGCACCTTCCAGCTGCGGTaGGCGCGCTGCCCTTATCCCGGTGCCTCACCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRLPGPRTFQLR*ARCPYPGASPL Trigger: AAGAGGTGAGGCACCGGGATAAGGGCAGCGCGCTCACCGCAGCTGGAAGGTGCGCGGGCCTGGCAGCCGCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411828.5 |
||
| CDS GCA 72 bp | CTTCGAAGGAGCCGCACTTCCCTCTTCCGCGCCAGCTaGAGACGCACCTCCCTGTCCTCGGGCGTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRRSRTSLFRAS*RRTSLSSGVSL Trigger: GAGGGAGACGCCCGAGGACAGGGAGGTGCGTCTGCAGCTGGCGCGGAAGAGGGAAGTGCGGCTCCTTCGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331573.8 ENST00000380900.2 |
||
| CDS GCA 72 bp | CTTCCAGCTGCGGTGAGCGCGCTGCCCTTATCCCGGTaGCTCACCTCTTCCGCGCCAGCTGCAGACGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LPAAVSALPLSR*LTSSAPAADAP Trigger: AGGTGCGTCTGCAGCTGGCGCGGAAGAGGTGAGGCACCGGGATAAGGGCAGCGCGCTCACCGCAGCTGGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411828.5 |
||
| CDS CAA 90 bp | TGGAGCACGGATATTTTTCTAGCAAAGAAACTTCCAAAGATGTTTTaGTTTGTCTTCGAAGGAGCCGCACTTCCCTCTTCCGCGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSTDIFLAKKLPKMF*FVFEGAALPSSAPA Trigger: AGCTGGCGCGGAAGAGGGAAGTGCGGCTCCTTCGAAGACAAACAAAAACATCTTTGGAAGTTTCTTTGCTAGAAAAATATCCGTGCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331573.8 ENST00000380900.2 |
||