RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSME4 (Homo sapiens)

Ensembl gene IDs: ENSG00000068878

Ensembl transcript IDs: ENST00000389993.7, ENST00000404125.6, ENST00000466539.1, ENST00000481518.1, ENST00000488687.5

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGTCTGTGGGAAGTGCACAGACACAGACTTCACTTCTGTGTCTTaGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCC +
Preference number: 1 (lower is better)
Translates to: PVCGKCTDTDFTSVS*SSNPSGHWLGSGLA
Trigger: GGCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGTGAAGTCTGTGTCTGTGCACTTCCCACAGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
3UTR GCA 90 bp AATCGCTGGCCACGTCTGTACAATACAGTCCCAATCATGAAGGTTTaGCAAGCACACACCACTGTGATTTCCAAGGAGACAGTACAAGGC +
Preference number: 1 (lower is better)
Translates to: NRWPRLYNTVPIMKV*QAHTTVISKETVQG
Trigger: GCCTTGTACTGTCTCCTTGGAAATCACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGGGACTGTATTGTACAGACGTGGCCAGCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 90 bp AGCAACTGGCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTaGACAGACACAGACTTCACTTCTGTGTCTTGGTCGAGCAATCCA +
Preference number: 1 (lower is better)
Translates to: SNWLYSAPKTPVCGK*TDTDFTSVSWSSNP
Trigger: TGGATTGCTCGACCAAGACACAGAAGTGAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGCCAGTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
3UTR TCA 90 bp AAGTCGACATGCATCTACAAAGGATCCTCCTTCACCACTCAATGGTaGTTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTTCCGGGGATC +
Preference number: 1 (lower is better)
Translates to: KSTCIYKGSSFTTQW*FQQQFKKPVKFPGI
Trigger: GATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAAGGAGGATCCTTTGTAGATGCATGTCGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 90 bp ACAAGCTCCCCAGTCATTATAAGTTTCTACGGTAATATTGGACAGTaGTGTTCTAAGCAGAGGGCACAGAAGCTCCCAAAGCTTCTCCAC +
Preference number: 1 (lower is better)
Translates to: TSSPVIISFYGNIGQ*CSKQRAQKLPKLLH
Trigger: GTGGAGAAGCTTTGGGAGCTTCTGTGCCCTCTGCTTAGAACAGCACTGTCCAATATTACCGTAGAAACTTATAATGACTGGGGAGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 90 bp GTCCTTGATAGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTaGCACACTGCAGTATTCTGTAGGGTAGATAAGTGTGGTAGAACG +
Preference number: 1 (lower is better)
Translates to: VLDRKVFRRRLVKAT*HTAVFCRVDKCGRT
Trigger: CGTTCTACCACACTTATCTACCCTACAGAATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTATCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR TCA 90 bp CCTTCACCACTCAATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTaGAGTTTCCGGGGATCTCTGCTTTCACAGGATGTTGCTATACAA +
Preference number: 1 (lower is better)
Translates to: PSPLNGDSNSSSKSQ*SFRGSLLSQDVAIQ
Trigger: TTGTATAGCAACATCCTGTGAAAGCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 90 bp CATCGCTGGGTGCTTTCATGTGAATCTGCAACCAAATGTTCTAAATaGGGCTTCAGAACTGGCAGGAAGGCATCATCAAAATTCCTGAAT +
Preference number: 1 (lower is better)
Translates to: HRWVLSCESATKCSK*GFRTGRKASSKFLN
Trigger: ATTCAGGAATTTTGATGATGCCTTCCTGCCAGTTCTGAAGCCCCATTTAGAACATTTGGTTGCAGATTCACATGAAAGCACCCAGCGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR TCA 90 bp TATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTaGGAAGCTGTGGAATGCAGACTAACGAGATCTAACACAGAAACC +
Preference number: 1 (lower is better)
Translates to: YSGNTSGQVGKSNGN*EAVECRLTRSNTET
Trigger: GGTTTCTGTGTTAGATCTCGTTAGTCTGCATTCCACAGCTTCTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
3UTR CCA 90 bp AGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTaGCAAAGATACATCTATCATGAATATGTAGGTCAGCACACTTCC +
Preference number: 1 (lower is better)
Translates to: SSKLRDMRRYGWCGI*QRYIYHEYVGQHTS
Trigger: GGAAGTGTGCTGACCTACATATTCATGATAGATGTATCTTTGCCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR TCA 90 bp AGAGGTTTCAATTTCTCCAGAATTCGAGCAGTAAACTCAGGGACATaGGGCGATATGGTTGGTGTGGTATTTGGCAAAGATACATCTATC +
Preference number: 1 (lower is better)
Translates to: RGFNFSRIRAVNSGT*GDMVGVVFGKDTSI
Trigger: GATAGATGTATCTTTGCCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATTCTGGAGAAATTGAAACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 90 bp CTCCAGAATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTaGTGTGGTATTTGGCAAAGATACATCTATCATGAATATGTAGGT +
Preference number: 1 (lower is better)
Translates to: LQNSSSKLRDMRRYG*CGIWQRYIYHEYVG
Trigger: ACCTACATATTCATGATAGATGTATCTTTGCCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATTCTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 90 bp CCTTTCAACGGAGGTAGGAGGTTTCCAGAGCCAATTAAACAGTTGTaGACTATAGTCAGACTCTGTAGAATATCATCTCTAGACATTTCA +
Preference number: 1 (lower is better)
Translates to: PFNGGRRFPEPIKQL*TIVRLCRISSLDIS
Trigger: TGAAATGTCTAGAGATGATATTCTACAGAGTCTGACTATAGTGCACAACTGTTTAATTGGCTCTGGAAACCTCCTACCTCCGTTGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 90 bp TTAGAACCTCTGATTAAACCAGCTATAATTTCTGCAACACATCGCTaGGTGCTTTCATGTGAATCTGCAACCAAATGTTCTAAATGGGGC +
Preference number: 1 (lower is better)
Translates to: LEPLIKPAIISATHR*VLSCESATKCSKWG
Trigger: GCCCCATTTAGAACATTTGGTTGCAGATTCACATGAAAGCACCCAGCGATGTGTTGCAGAAATTATAGCTGGTTTAATCAGAGGTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 90 bp ATCCATTTATTGGGTTTTAAACTAGTTACACAACTGAAATCAGTTTaGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTT +
Preference number: 1 (lower is better)
Translates to: IHLLGFKLVTQLKSV*HYFIQGLRLCMPTL
Trigger: AAGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAGTTGTGTAACTAGTTTAAAACCCAATAAATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404125.6
3UTR TCA 90 bp CTGTATGAACTTGTAGATAAACGAAGAAGATCTCTGATCATATCTTaGTGTATCTTTTTGTATTCACAACCCTCAACAGTTAGTGTCCGT +
Preference number: 1 (lower is better)
Translates to: LYELVDKRRRSLIIS*CIFLYSQPSTVSVR
Trigger: ACGGACACTAACTGTTGAGGGTTGTGAATACAAAAAGATACATCAAGATATGATCAGAGATCTTCTTCGTTTATCTACAAGTTCATACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CAA 90 bp TCCAGTCTGTGGGAAGTGCACAGACACAGACTTCACTTCTGTGTCTaGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGC +
Preference number: 2 (lower is better)
Translates to: SSLWEVHRHRLHFCV*VEQSIRSLVRFRTC
Trigger: GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGTGAAGTCTGTGTCTGTGCACTTCCCACAGACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
3UTR-3UTR TCA 90 bp CATGCACCAAGTCCTAGCACCCCAGCATGGCGTTTGACCAACTCTGCAGAAGGAGTAGAACGGAGAAGATaGTGCAAAAGGTTACAAGAC +
Preference number: 2 (lower is better)
Translates to: HAPSPSTPAWRLTNSAEGVERRR*CKRLQD
Trigger: GTCTTGTAACCTTTTGCATCATCTTCTCCGTTCTAC...TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGGACTTGGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CAA 90 bp CAATCGCTGGCCACGTCTGTACAATACAGTCCCAATCATGAAGGTTaGCCAAGCACACACCACTGTGATTTCCAAGGAGACAGTACAAGG +
Preference number: 2 (lower is better)
Translates to: QSLATSVQYSPNHEG*PSTHHCDFQGDSTR
Trigger: CCTTGTACTGTCTCCTTGGAAATCACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGGGACTGTATTGTACAGACGTGGCCAGCGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR TCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGCACAATGCTGGAGTTTaGCGAGCTCAGGCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWHNAGV*RAQAEE
Trigger: TTCTTCAGCCTGAGCTCGTCAAACTCCAGCATTGTG...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCCTTGTCAAAGCCACCTaGCACACTGCAGTATTCTGT +
Preference number: 2 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCLVKAT*HTAVFC
Trigger: ACAGAATACTGCAGTGTGCCAGGTGGCTTTGACAAG...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR TCA 90 bp ATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTTCCGGGGATCTCTGCATACAGTCCCAATCATaGAGGTTTGCCAAGCACACA +
Preference number: 2 (lower is better)
Translates to: MVIPTAVQKASEVSGDLCIQSQS*RFAKHT
Trigger: TGTGTGCTTGGCAAACCTTCATGATTGGGACTGTAT...GCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR GCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACCAGGACCACTGCTGTaGTTAGGTCTGTATTCAGTC +
Preference number: 2 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTPGPLL*LGLYSV
Trigger: GACTGAATACAGACCTAAGCACAGCAGTGGTCCTGG...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
3UTR-3UTR CCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCCTTCAAAGATTCTTCTaGGCAGCACTTTACAGCAGC +
Preference number: 2 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCLQRFF*AALYSS
Trigger: GCTGCTGTAAAGTGCTGCCCAGAAGAATCTTTGAAG...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CCA 90 bp ATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTTCCGGGGATCTCTGCATAACACTGCAGCAGTaGGGAACAAAGAGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: MVIPTAVQKASEVSGDLCITLQQ*GTKSFK
Trigger: TTTGAAGCTCTTTGTTCCCCACTGCTGCAGTGTTAT...GCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGTCACCAGCAATAATTTaGGTGGGTTTAGGGCATCCA +
Preference number: 2 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWSPAII*VGLGHP
Trigger: TGGATGCCCTAAACCCACCCAAATTATTGCTGGTGA...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGTCTGCAACACATCGCTaGGTGCTTTCATGTGAATCT +
Preference number: 2 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKSATHR*VLSCES
Trigger: AGATTCACATGAAAGCACCCAGCGATGTGTTGCAGA...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR TCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCTCATTCATTGTAAGCTaGGTTATAACACTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFSFIVS*VITLQQ
Trigger: CTGCTGCAGTGTTATAACTCAGCTTACAATGAATGA...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTCCATCCCCACAATGCTaGAGTTTGACGAGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: VASVQCLANAISTVYTLFPSPQC*SLTSSG
Trigger: GCCTGAGCTCGTCAAACTCCAGCATTGTGGGGATGG...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR TCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGAAACAATCTCACTATTaGTGGCTTTTCCAGGGACAT +
Preference number: 2 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWKQSHY*WLFQGH
Trigger: ATGTCCCTGGAAAAGCCATCAATAGTGAGATTGTTT...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR GCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGCAGGGCAGGTTTCTTTaGTCCACACCATCTAGCAAG +
Preference number: 2 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSQGRFL*STPSSK
Trigger: CTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTG...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CCA 90 bp ATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTTCCGGGGATCTCTGCAAATGTAGGGTTCTTTaGAGAATCTTTACAAGCTGC +
Preference number: 2 (lower is better)
Translates to: MVIPTAVQKASEVSGDLCKCRVL*RIFTSC
Trigger: GCAGCTTGTAAAGATTCTCCAAAGAACCCTACATTT...GCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR GCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGCCAATCATGAAGGTTTaGCAAGCACACACCACTGTG +
Preference number: 2 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSPIMKV*QAHTTV
Trigger: CACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGG...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CAA 90 bp TCTCCTTTCAACGGAGGTAGGAGGTTTCCAGAGCCAATTAAACAGTaGTGCACTATAGTCAGACTCTGTAGAATATCATCTCTAGACATT +
Preference number: 2 (lower is better)
Translates to: SPFNGGRRFPEPIKQ*CTIVRLCRISSLDI
Trigger: AATGTCTAGAGATGATATTCTACAGAGTCTGACTATAGTGCACAACTGTTTAATTGGCTCTGGAAACCTCCTACCTCCGTTGAAAGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR TCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGCCACTGGGGCAATCTTaGAAAACAAAGGTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSPLGQS*KTKVEA
Trigger: AGCTTCTACCTTTGTTTTTCAAGATTGCCCCAGTGG...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGATGGTCAGCTTTTTGTaGGTTCTTTTTAGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKMVSFL*VLFSCL
Trigger: TAAACAGCTAAAAAGAACCCACAAAAAGCTGACCAT...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR TCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGAAGAGTTTAATGCCCTaGGTTCGCTCATCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSKSLMP*VRSSSS
Trigger: TGAAGAAGATGAGCGAACTCAGGGCATTAAACTCTT...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR GCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGGCACCCTTGAATTGTTaGTGTGTAACACCTTGTCTA +
Preference number: 2 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSAPLNC*CVTPCL
Trigger: TAGACAAGGTGTTACACAGCAACAATTCAAGGGTGC...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR GCA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATAAGTTGTTCTGTAACTaGTGTAGAAAAGGATCTTCC +
Preference number: 2 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHKLFCN*CRKGSS
Trigger: GGAAGATCCTTTTCTACAGCAGTTACAGAACAACTT...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR GCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTTACTTCAGTAGTCTGTaGAATAGTTCAGGCACTCTC +
Preference number: 2 (lower is better)
Translates to: VASVQCLANAISTVYTLFYFSSL*NSSGTL
Trigger: GAGAGTGCCTGAACTATTGCACAGACTACTGAAGTA...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGGAGGCAAAAACGTCGTaGATTAAACTTATCTTTTCC +
Preference number: 2 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSEAKTS*IKLIFS
Trigger: GGAAAAGATAAGTTTAATCCACGACGTTTTTGCCTC...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR GCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTCTTTCGAACTACAATTaGATCATGGTTGAGATTCTC +
Preference number: 2 (lower is better)
Translates to: VASVQCLANAISTVYTLFLSNYN*IMVEIL
Trigger: GAGAATCTCAACCATGATGCAATTGTAGTTCGAAAG...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp ACATGCCACTGGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGTATTCAGAAGGAGGCTaGTCAAAGCCACCTGGCACA +
Preference number: 3 (lower is better)
Translates to: TCHWIPRFHKSPGLPQSLYSEGG*SKPPGT
Trigger: TGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATA...CAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp CATGCACCAAGTCCTAGCACCCCAGCATGGCGTTTGACCAACTCTGCAGAAGGACAGTACAAGGCACCCTaGAATTGTTGCTGTGTAACA +
Preference number: 3 (lower is better)
Translates to: HAPSPSTPAWRLTNSAEGQYKAP*NCCCVT
Trigger: TGTTACACAGCAACAATTCAAGGGTGCCTTGTACTG...TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGGACTTGGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 72 bp GCAAAAGACACTTCTTCTGAAGAAGGAACATGCCACTaGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCC +
Preference number: 3 (lower is better)
Translates to: AKDTSSEEGTCH*IPRFHKSPGLP
Trigger: GGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGTTCCTTCTTCAGAAGAAGTGTCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAACAAGGCACCCTTGAATaGTTGCTGTGTAACACCTTG +
Preference number: 3 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQQGTLE*LLCNTL
Trigger: CAAGGTGTTACACAGCAACAATTCAAGGGTGCCTTG...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp TGGGTGAGTTTGGGTTCCAAGTACTTCAGTAGTCTGTaGAATAGTTCAGGCACTCTCCATTCTTGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: WVSLGSKYFSSL*NSSGTLHSCWA
Trigger: TGCCCAGCAAGAATGGAGAGTGCCTGAACTATTGCACAGACTACTGAAGTACTTGGAACCCAAACTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTaGACAGACACAGACTTCACTTCTGTGTCTTGGTCG +
Preference number: 3 (lower is better)
Translates to: LYSAPKTPVCGK*TDTDFTSVSWS
Trigger: CGACCAAGACACAGAAGTGAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
3UTR CCA 72 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTaGTTAGGTTCAGGACTTGCCCTCTTTTCCTTCCCT +
Preference number: 3 (lower is better)
Translates to: TSVSWSSNPSGH*LGSGLALFSFP
Trigger: AGGGAAGGAAAAGAGGGCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
3UTR CCA 72 bp GGGAAGTGCACAGACACAGACTTCACTTCTGTGTCTTaGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCA +
Preference number: 3 (lower is better)
Translates to: GKCTDTDFTSVS*SSNPSGHWLGS
Trigger: TGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGTGAAGTCTGTGTCTGTGCACTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
3UTR-3UTR CAA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCGGTTTGCCCCAGTCCTaGATAGGAAAGTATTCAGAA +
Preference number: 3 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTGLPQS*IGKYSE
Trigger: TTCTGAATACTTTCCTATCAAGGACTGGGGCAAACC...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp TATACAAGCTCCCCAGTCATTATAAGTTTCTACGGTAATATTGGACAGTGCTGTCACAAGTCCCCGGGTTaGCCCCAGTCCTTGATAGGA +
Preference number: 3 (lower is better)
Translates to: YTSSPVIISFYGNIGQCCHKSPG*PQSLIG
Trigger: TCCTATCAAGGACTGGGGCAAACCCGGGGACTTGTG...ACAGCACTGTCCAATATTACCGTAGAAACTTATAATGACTGGGGAGCTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp CCACGTCTGTACAATACAGTCCCAATCATGAAGGTTTaGCAAGCACACACCACTGTGATTTCCAAGGAGACA +
Preference number: 3 (lower is better)
Translates to: PRLYNTVPIMKV*QAHTTVISKET
Trigger: TGTCTCCTTGGAAATCACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGGGACTGTATTGTACAGACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp AGGATCCTCCTTCACCACTCAATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGTCCAGTATACAACTTaGTCTCTTCCAAGGACACCA +
Preference number: 3 (lower is better)
Translates to: RILLHHSMVIPTAVQKASVQYTT*SLPRTP
Trigger: TGGTGTCCTTGGAAGAGACAAAGTTGTATACTGGAC...ACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAAGGAGGATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAAGATTTCTTTACTAAGTaGAAGCTTTTCCATCGGGAG +
Preference number: 3 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQDFFTK*KLFHRE
Trigger: CTCCCGATGGAAAAGCTTCAACTTAGTAAAGAAATC...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR TCA 72 bp CTCAATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTaGAGTTTCCGGGGATCTCTGCTTTCACAGGATGTT +
Preference number: 3 (lower is better)
Translates to: LNGDSNSSSKSQ*SFRGSLLSQDV
Trigger: AACATCCTGTGAAAGCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp GGTAGGTCAGTACTGTGTATCGTGCATGCCAAGAACTaGTTCTTGCTGTTTGTTTTAGCACCTGAAGTACCA +
Preference number: 3 (lower is better)
Translates to: GRSVLCIVHAKN*FLLFVLAPEVP
Trigger: TGGTACTTCAGGTGCTAAAACAAACAGCAAGAAGCAGTTCTTGGCATGCACGATACACAGTACTGACCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp TTTGGCACTACTTTATACAGGGATTACGCCTGTGTATaGCGACACTTAAATACTGTACCAGGACCACTGCTG +
Preference number: 3 (lower is better)
Translates to: FGTTLYRDYACV*RHLNTVPGPLL
Trigger: CAGCAGTGGTCCTGGTACAGTATTTAAGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
3UTR CCA 72 bp AGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTaGCACACTGCAGTATTCTGTAGGGTAGATAAGTGT +
Preference number: 3 (lower is better)
Translates to: RKVFRRRLVKAT*HTAVFCRVDKC
Trigger: ACACTTATCTACCCTACAGAATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 72 bp CATGGTGACACAAGAAGATCGGTGAGAACAAGCAGTTaGTCATCAGTGAATTGCTGTTTATGTTCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: HGDTRRSVRTSS*SSVNCCLCSCQ
Trigger: CTGGCAGGAACATAAACAGCAATTCACTGATGACCAACTGCTTGTTCTCACCGATCTTCTTGTGTCACCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATAAGTACCAAAGGCACTaGATGAGGGTAAAGCAACCC +
Preference number: 3 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHKYQRH*MRVKQP
Trigger: GGGTTGCTTTACCCTCATCAAGTGCCTTTGGTACTT...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp CCAGTCATTATAAGTTTCTACGGTAATATTGGACAGTaGTGTTCTAAGCAGAGGGCACAGAAGCTCCCAAAG +
Preference number: 3 (lower is better)
Translates to: PVIISFYGNIGQ*CSKQRAQKLPK
Trigger: CTTTGGGAGCTTCTGTGCCCTCTGCTTAGAACAGCACTGTCCAATATTACCGTAGAAACTTATAATGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp TGCCGACACTTAAATACTGTACCAGGACCACTGCTGTaGTTAGGTCTGTATTCAGTCATTCAGCATGTAGAT +
Preference number: 3 (lower is better)
Translates to: CRHLNTVPGPLL*LGLYSVIQHVD
Trigger: ATCTACATGCTGAATGACTGAATACAGACCTAAGCACAGCAGTGGTCCTGGTACAGTATTTAAGTGTCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
3UTR TCA 72 bp GTCTATCAGGCCTTAAGAACTCCAAAACCAAGGGAATaGTATCTCTGCAACAGAAGTTATATGCTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: VYQALRTPKPRE*YLCNRSYMLPR
Trigger: CCTTGGGAGCATATAACTTCTGTTGCAGAGATATCATTCCCTTGGTTTTGGAGTTCTTAAGGCCTGATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR TCA 72 bp TGCATCTACAAAGGATCCTCCTTCACCACTCAATGGTaGTTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTT +
Preference number: 3 (lower is better)
Translates to: CIYKGSSFTTQW*FQQQFKKPVKF
Trigger: AAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAAGGAGGATCCTTTGTAGATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 72 bp GTGCTTTCATGTGAATCTGCAACCAAATGTTCTAAATaGGGCTTCAGAACTGGCAGGAAGGCATCATCAAAA +
Preference number: 3 (lower is better)
Translates to: VLSCESATKCSK*GFRTGRKASSK
Trigger: TTTTGATGATGCCTTCCTGCCAGTTCTGAAGCCCCATTTAGAACATTTGGTTGCAGATTCACATGAAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 72 bp TCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTaGTGTGGTATTTGGCAAAGATACATCTATCATGAA +
Preference number: 3 (lower is better)
Translates to: SSSKLRDMRRYG*CGIWQRYIYHE
Trigger: TTCATGATAGATGTATCTTTGCCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp GGAGGTAGGAGGTTTCCAGAGCCAATTAAACAGTTGTaGACTATAGTCAGACTCTGTAGAATATCATCTCTA +
Preference number: 3 (lower is better)
Translates to: GGRRFPEPIKQL*TIVRLCRISSL
Trigger: TAGAGATGATATTCTACAGAGTCTGACTATAGTGCACAACTGTTTAATTGGCTCTGGAAACCTCCTACCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp TATACAAGCTCCCCAGTCATTATAAGTTTCTACGGTAATATTGGACAGTGCTGTAAACAACCATATTCTTaGGCCAGGTGTAGTATCCCC +
Preference number: 3 (lower is better)
Translates to: YTSSPVIISFYGNIGQCCKQPYS*ARCSIP
Trigger: GGGGATACTACACCTGGCCAAAGAATATGGTTGTTT...ACAGCACTGTCCAATATTACCGTAGAAACTTATAATGACTGGGGAGCTTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR-3UTR CAA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTCAATCCATCAGGTCATaGGTTAGGTTCAGGACTTGC +
Preference number: 3 (lower is better)
Translates to: VASVQCLANAISTVYTLFQSIRS*VRFRTC
Trigger: GCAAGTCCTGAACCTAACCAATGACCTGATGGATTG...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
3UTR CCA 72 bp CTGATTAAACCAGCTATAATTTCTGCAACACATCGCTaGGTGCTTTCATGTGAATCTGCAACCAAATGTTCT +
Preference number: 3 (lower is better)
Translates to: LIKPAIISATHR*VLSCESATKCS
Trigger: AGAACATTTGGTTGCAGATTCACATGAAAGCACCCAGCGATGTGTTGCAGAAATTATAGCTGGTTTAATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR GCA 72 bp AAGTTGTTCTGTAACTGCTGTAGAAAAGGATCTTCCTaGACTTGCCATCAGCCATTTCAATATGGTTTTCAA +
Preference number: 3 (lower is better)
Translates to: KLFCNCCRKGSS*TCHQPFQYGFQ
Trigger: TTGAAAACCATATTGAAATGGCTGATGGCAAGTGCAGGAAGATCCTTTTCTACAGCAGTTACAGAACAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 72 bp AGAAGTTTCCTTATAACTGTAGCAATTACTTCTCGGTaGTTCTCTCGAGACAGATCATATTCAAGTCCAGTA +
Preference number: 3 (lower is better)
Translates to: RSFLITVAITSR*FSRDRSYSSPV
Trigger: TACTGGACTTGAATATGATCTGTCTCGAGAGAACCACCGAGAAGTAATTGCTACAGTTATAAGGAAACTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CCA 72 bp TTGGGTTTTAAACTAGTTACACAACTGAAATCAGTTTaGCACTACTTTATACAGGGATTACGCCTGTGTATG +
Preference number: 3 (lower is better)
Translates to: LGFKLVTQLKSV*HYFIQGLRLCM
Trigger: CATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAGTTGTGTAACTAGTTTAAAACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404125.6
3UTR TCA 72 bp ATTGTGAAGTCCAAGCCAATTGTTTCATACTGCCTATaGATCTTTTCTGCAAGATCATCAAACAATCTCACT +
Preference number: 3 (lower is better)
Translates to: IVKSKPIVSYCL*IFSARSSNNLT
Trigger: AGTGAGATTGTTTGATGATCTTGCAGAAAAGATTCATAGGCAGTATGAAACAATTGGCTTGGACTTCACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCCGGGCCACAGCTCTTaGAGCTGCACGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLPGHSS*SCTARP
Trigger: GGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGG...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ACATGCCACTGGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGTTGATCTGGGCCAGCTaGAAGTCGGACTCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: TCHWIPRFHKSPGLPQSLLIWAS*KSDSAS
Trigger: AGACGCCGAGTCCGACTTGCAGCTGGCCCAGATCAA...CAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCCGGGCCACAGCTCTTaGAGCTGCACGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLPGHSS*SCTARP
Trigger: GGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCACAGCTCTTGGAGCTaGACGGCCCGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLHSSWS*TARPRL
Trigger: CAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTG...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGCGGCTCTCAGTTCGTTaGCGGCGGCAGCGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATERLSVR*RRQRPL
Trigger: GAGCGGCCGCTGCCGCCGCCAACGAACTGAGAGCCG...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAAATGTGGAGAGTTTCCTaGTCCAGAAGAGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQMWRVS*SRRGPR
Trigger: CCGGGGGCCTCTTCTGGACCAGGAAACTCTCCACAT...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp CATGCACCAAGTCCTAGCACCCCAGCATGGCGTTTGACCAACTCTGCAGAAGGAAAGCACACACCACTGTaGTTTCCAAGGAGACAGTAC +
Preference number: 4 (lower is better)
Translates to: HAPSPSTPAWRLTNSAEGKHTPL*FPRRQY
Trigger: GTACTGTCTCCTTGGAAATCACAGTGGTGTGTGCTT...TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGGACTTGGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGAGCGCGGCACATGTCTaGCACCATGCGACCTGCTAC +
Preference number: 4 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKSAAHV*HHATCY
Trigger: GTAGCAGGTCGCATGGTGGCAGACATGTGCCGCGCT...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGTGGCCGGCGTGCTGCTaGGCCCCACGCGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTWPACC*APRGSQ
Trigger: CTGAGAGCCGCGTGGGGCCCAGCAGCACGCCGGCCA...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTCTAGGCCCCCTTCCCTaGCCGGCGTGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFLGPLP*PACCWA
Trigger: GGCCCAGCAGCACGCCGGCCAGGGAAGGGGGCCTAG...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp CATGCACCAAGTCCTAGCACCCCAGCATGGCGTTTGACCAACTCTGCAGAAGGACCAATTCAGGTCTCATaGGTGCAAGATTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: HAPSPSTPAWRLTNSAEGPIQVS*VQDSAK
Trigger: CTTTGCAGAATCTTGCACTCATGAGACCTGAATTGG...TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGGACTTGGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATCACAGCTCTTGGAGCTaGACGGCCCGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNHSSWS*TARPRL
Trigger: CAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTG...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp CATGCACCAAGTCCTAGCACCCCAGCATGGCGTTTGACCAACTCTGCAGAAGGACATTGTGGGAGATTTTaGACTGAAACCCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HAPSPSTPAWRLTNSAEGHCGRF*TETQRP
Trigger: TGGCCTTTGGGTTTCAGTGCAAAATCTCCCACAATG...TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGGACTTGGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCGGCACTCTCCATTCTTaGTGGGCAAGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFGTLHS*WARPPC
Trigger: ACAAGGTGGCCTTGCCCAGCAAGAATGGAGAGTGCC...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCCTAGCACCCCAGCATaGCGTTTGACCAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLPSTPA*RLTNSA
Trigger: TGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGG...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAAGAGAGCCACCACAGATaGTACCTGAGGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQESHHR*YLRVWN
Trigger: ATTCCACACCCTCAGGTACCATCTGTGGTGGCTCTC...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCTGCTTGGCTAAGCCCTaGAGAAACAATCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFCLAKP*RNNRWP
Trigger: TGGCCAGCGATTGTTTCTTCAGGGCTTAGCCAAGCA...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp CATGCACCAAGTCCTAGCACCCCAGCATGGCGTTTGACCAACTCTGCAGAAGGACAAAGTTGCTCAAAATaGATCTGCATAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: HAPSPSTPAWRLTNSAEGQSCSK*ICIGLS
Trigger: GGACAGTCCTATGCAGATTCATTTTGAGCAACTTTG...TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGGACTTGGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACATTGATCTGGGCCAGCTaGAAGTCGGACTCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTLIWAS*KSDSAS
Trigger: AGACGCCGAGTCCGACTTGCAGCTGGCCCAGATCAA...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp ATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGATAGGAAAGTATGGACTAACACTTGACTaGTTCCCACTGGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: IPRFHKSPGLPQSLIGKYGLTLD*FPLGGS
Trigger: TGAACCTCCCAGTGGGAAGCAGTCAAGTGTTAGTCC...ATACTTTCCTATCAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp CATGCACCAAGTCCTAGCACCCCAGCATGGCGTTTGACCAACTCTGCAGAAGGATACTTCAGTAGTCTGTaGAATAGTTCAGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: HAPSPSTPAWRLTNSAEGYFSSL*NSSGTL
Trigger: GAGAGTGCCTGAACTATTGCACAGACTACTGAAGTA...TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGGACTTGGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CAA 72 bp CACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATaGGTTAGGTTCAGGACTTGCCCTCTTTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HFCVLVEQSIRS*VRFRTCPLFLP
Trigger: GGGAAGGAAAAGAGGGCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATGCCAAGACTTGGGACTAACACTTaGCTGCTTCCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: IKYHGLEVGQYCVSCMPRLGTNT*LLPTGR
Trigger: CCTCCCAGTGGGAAGCAGTCAAGTGTTAGTCCCAAG...TCTTGGCATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTCTTGGGACTAACACTTaGCTGCTTCCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTLGTNT*LLPTGR
Trigger: CCTCCCAGTGGGAAGCAGTCAAGTGTTAGTCCCAAG...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTAAACCATCTGCCTCCTaGTACCAAACTGCGGGCTAC +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLKPSAS*YQTAGY
Trigger: GTAGCCCGCAGTTTGGTATCAGGAGGCAGATGGTTT...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCCACAATGCTGGAGTTTaGCGAGCTCAGGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFHNAGV*RAQAEE
Trigger: TTCTTCAGCCTGAGCTCGTCAAACTCCAGCATTGTG...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCGTAAACTCAGGGACATaGGGCGATATGGTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFVNSGT*GDMVGV
Trigger: CACACCAACCATATCGCCTCATGTCCCTGAGTTTAC...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTGGACTAACACTTGACTaGTTCCCACTGGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLGLTLD*FPLGGS
Trigger: TGAACCTCCCAGTGGGAAGCAGTCAAGTGTTAGTCC...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ACATGCCACTGGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGCCAATTAAACAGTTGTaGACTATAGTCAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: TCHWIPRFHKSPGLPQSLPIKQL*TIVRLC
Trigger: ACAGAGTCTGACTATAGTGCACAACTGTTTAATTGG...CAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCCCAGTCTGTGGGAAGTaGACAGACACAGACTTCACT +
Preference number: 4 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTPVCGK*TDTDFT
Trigger: AGTGAAGTCTGTGTCTGTGCACTTCCCACAGACTGG...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCCCAGGACCACTGCTGTaGTTAGGTCTGTATTCAGTC +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFPGPLL*LGLYSV
Trigger: GACTGAATACAGACCTAAGCACAGCAGTGGTCCTGG...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCAGATTCTGCAAAGCCTaGGCTGCTTCTAGACTACCG +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCRFCKA*AASRLP
Trigger: CGGTAGTCTAGAAGCAGCCCAGGCTTTGCAGAATCT...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCACTCTCCATTCTTGCTaGGCAAGGCCACCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTTLHSC*ARPPCS
Trigger: ACTACAAGGTGGCCTTGCCCAGCAAGAATGGAGAGT...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CAA 72 bp CCCCAGTCCTTGATAGGAAAGTATTCAGAAGGAGGCTaGTCAAAGCCACCTGGCACACTGCAGTATTCTGTA +
Preference number: 4 (lower is better)
Translates to: PQSLIGKYSEGG*SKPPGTLQYSV
Trigger: TACAGAATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTATCAAGGACTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CAA 72 bp GCCACGTCTGTACAATACAGTCCCAATCATGAAGGTTaGCCAAGCACACACCACTGTGATTTCCAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ATSVQYSPNHEG*PSTHHCDFQGD
Trigger: GTCTCCTTGGAAATCACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGGGACTGTATTGTACAGACGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
3UTR CAA 72 bp TGGGAAGTGCACAGACACAGACTTCACTTCTGTGTCTaGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: WEVHRHRLHFCV*VEQSIRSLVRF
Trigger: GAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGTGAAGTCTGTGTCTGTGCACTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TTTGGAGAATCTTTACAAGCTGCTCCCTATAAAGAAGCAACTTCCTTCCATCCAGGCCCAGGTTGCATTTaGTCTGGGCCAGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: FGESLQAAPYKEATSFHPGPGCI*SGPAAS
Trigger: ACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCC...TGGATGGAAGGAAGTTGCTTCTTTATAGGGAGCAGCTTGTAAAGATTCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCGATACCAGCAACAGCTaGGATAGCCATCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFDTSNS*DSHLSN
Trigger: GTTCGAAAGATGGCTATCTCAGCTGTTGCTGGTATC...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAACTGGGTGCTTTCATGTaGATCTGCAACCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQLGAFM*ICNQMF
Trigger: GAACATTTGGTTGCAGATTCACATGAAAGCACCCAG...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTAGTTCAAAAAGCCAGTaGAGTTTCCGGGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLSSKSQ*SFRGSL
Trigger: CAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCTGCCAGTTGTCATGGTaGGTCCTTCGGAAATTGGAT +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCCQLSW*VLRKLD
Trigger: ATCCAATTTCCGAAGGACTCACCATGACAACTGGCA...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ATAGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTGGCACACTGCAGTATAGGCGGGCAAATCCCTaGATCATGCTGATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: IGKYSEGGLSKPPGTLQYRRANP*IMLISS
Trigger: ACTGGAAATCAGCATGATGCAGGGATTTGCCCGCCT...ATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTCTCAGCGGTGGCATCTaGTGGAAAATATGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFLSGGI*WKIWSA
Trigger: TGCCGACCATATTTTCCAGCAGATGCCACCGCTGAG...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp CTGCAGCAGTGGGGAACAAAGAGCTTCAAAGATTCTTCTGGGCAGCACTTTACACTTCAGGAAACCATCTaGCTCCTGATACCAAACTGC +
Preference number: 4 (lower is better)
Translates to: LQQWGTKSFKDSSGQHFTLQETI*LLIPNC
Trigger: GCAGTTTGGTATCAGGAGGCAGATGGTTTCCTGAAG...TGTAAAGTGCTGCCCAGAAGAATCTTTGAAGCTCTTTGTTCCCCACTGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTTTTCCATCCCCACAATaGTGGAGTTTGACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLFPSPQ*WSLTSS
Trigger: TGAGCTCGTCAAACTCCAGCATTGTGGGGATGGAAA...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAAACTGTGTATCGTGCATaGCAAGAACTGCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQTVYRA*QELLLA
Trigger: AGCAAGAAGCAGTTCTTGGCATGCACGATACACAGT...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp ATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGATAGGAAAGTATCAGTACTGTGTATCGTaGATGCCAAGAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: IPRFHKSPGLPQSLIGKYQYCVS*MPRTAS
Trigger: AGAAGCAGTTCTTGGCATGCACGATACACAGTACTG...ATACTTTCCTATCAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTAGCGGTGGCATCTGCTaGAAAATATGGTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFSGGIC*KIWSAA
Trigger: AGCTGCCGACCATATTTTCCAGCAGATGCCACCGCT...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGAGATTCTGCAAAGCCTaGGCTGCTTCTAGACTACCG +
Preference number: 4 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWRFCKA*AASRLP
Trigger: CGGTAGTCTAGAAGCAGCCCAGGCTTTGCAGAATCT...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGATAGGAAAGTATTCACCAGCAATAATTTaGGTGGGTTTAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: IPRFHKSPGLPQSLIGKYSPAII*VGLGHP
Trigger: TGGATGCCCTAAACCCACCCAAATTATTGCTGGTGA...ATACTTTCCTATCAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCGGACATGAGGCGATATaGTTGGTGTGGTATTTGGCA +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCGHEAI*LVWYLA
Trigger: TGCCAAATACCACACCAACCATATCGCCTCATGTCC...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGCCTAGCACCCCAGCATaGCGTTTGACCAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATEPSTPA*RLTNSA
Trigger: TGCAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGG...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACACCCATCATGGCGGTaGTCCATATTACAGCATGTC +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTHPSWR*SILQHV
Trigger: GACATGCTGTAATATGGATCACCGCCATGATGGGTG...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTATACAGTCCCAATCATaGAGGTTTGCCAAGCACACA +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLIQSQS*RFAKHT
Trigger: TGTGTGCTTGGCAAACCTTCATGATTGGGACTGTAT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTAGTTCAAAAAGCCAGTaGAGTTTCCGGGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLSSKSQ*SFRGSL
Trigger: CAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACT...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTGTAAACTCAGGGACATaGGGCGATATGGTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTVNSGT*GDMVGV
Trigger: CACACCAACCATATCGCCTCATGTCCCTGAGTTTAC...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp TCAAGTCCAGTATACAACTTTGTCTCTTCCAAGGACACCATACTTGGTACTAAGCCCCAGCATGGCGTTTaGCCAACTCTGCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SSPVYNFVSSKDTILGTKPQHGV*PTLQKE
Trigger: TTCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGG...CTTAGTACCAAGTATGGTGTCCTTGGAAGAGACAAAGTTGTATACTGGACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTACACAAGAAGATCGGTaGGAACAAGCAGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLTQEDR*EQAVGH
Trigger: ATGACCAACTGCTTGTTCTCACCGATCTTCTTGTGT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGCTCCTGATACCAAACTaGGGGCTACTCCAATTACAC +
Preference number: 4 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWLLIPN*GLLQLH
Trigger: GTGTAATTGGAGTAGCCCGCAGTTTGGTATCAGGAG...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCTCCTGATACCAAACTaGGGGCTACTCCAATTACAC +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLLLIPN*GLLQLH
Trigger: GTGTAATTGGAGTAGCCCGCAGTTTGGTATCAGGAG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGACATGTCTGCCACCATaGGACCTGCTACTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWTCLPP*DLLLLF
Trigger: AAACAAGAGTAGCAGGTCGCATGGTGGCAGACATGT...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTACATGTCTGCCACCATaGGACCTGCTACTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLTCLPP*DLLLLF
Trigger: AAACAAGAGTAGCAGGTCGCATGGTGGCAGACATGT...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCCAATCATGAAGGTTTaGCAAGCACACACCACTGTG +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLPIMKV*QAHTTV
Trigger: CACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp AGGATCCTCCTTCACCACTCAATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGCTTTCACAGGATGTTaGTATACAAGCTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RILLHHSMVIPTAVQKASAFTGC*YTSSPV
Trigger: GACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGC...ACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAAGGAGGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCTTTCACAGGATGTTaGTATACAAGCTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLAFTGC*YTSSPV
Trigger: GACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGC...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACCAGTCTGTGGGAAGTaGACAGACACAGACTTCACT +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTPVCGK*TDTDFT
Trigger: AGTGAAGTCTGTGTCTGTGCACTTCCCACAGACTGG...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCATCTGCTGGAAAATATaGTCGGCAGCTTTTCACGAG +
Preference number: 4 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTICWKI*SAAFHE
Trigger: CTCGTGAAAAGCTGCCGACCATATTTTCCAGCAGAT...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGAGCGGTGGCATCTGCTaGAAAATATGGTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATESGGIC*KIWSAA
Trigger: AGCTGCCGACCATATTTTCCAGCAGATGCCACCGCT...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGCTAGCATCTCAGCGGTaGCATCTGCTGGAAAATATG +
Preference number: 4 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKLASQR*HLLENM
Trigger: CATATTTTCCAGCAGATGCCACCGCTGAGATGCTAG...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAAATAACACTGCAGCAGTaGGGAACAAAGAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQITLQQ*GTKSFK
Trigger: TTTGAAGCTCTTTGTTCCCCACTGCTGCAGTGTTAT...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGAAGGAACATGCCACTaGATTCCCAGATTCCACAAG +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLEGTCH*IPRFHK
Trigger: CTTGTGGAATCTGGGAATCCAGTGGCATGTTCCTTC...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATCCATCCCCACAATGCTaGAGTTTGACGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNPSPQC*SLTSSG
Trigger: GCCTGAGCTCGTCAAACTCCAGCATTGTGGGGATGG...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp CTGCAGCAGTGGGGAACAAAGAGCTTCAAAGATTCTTCTGGGCAGCACTTTACATCTGCAACACATCGCTaGGTGCTTTCATGTGAATCT +
Preference number: 4 (lower is better)
Translates to: LQQWGTKSFKDSSGQHFTSATHR*VLSCES
Trigger: AGATTCACATGAAAGCACCCAGCGATGTGTTGCAGA...TGTAAAGTGCTGCCCAGAAGAATCTTTGAAGCTCTTTGTTCCCCACTGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCTCTGCAACACATCGCTaGGTGCTTTCATGTGAATCT +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCSATHR*VLSCES
Trigger: AGATTCACATGAAAGCACCCAGCGATGTGTTGCAGA...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAAAGTTGGGAAATCAAATaGCAACTGAGAAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQSWEIK*QLRSCG
Trigger: TCCACAGCTTCTCAGTTGCCATTTGATTTCCCAACT...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCAATCCATCAGGTCATTaGTTAGGTTCAGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFNPSGH*LGSGLA
Trigger: GGCAAGTCCTGAACCTAACCAATGACCTGATGGATT...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTAAAAACTCCAGTCTGTaGGAAGTGCACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLKNSSL*EVHRHR
Trigger: TCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATCACCCATCATGGCGGTaGTCCATATTACAGCATGTC +
Preference number: 4 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHHPSWR*SILQHV
Trigger: GACATGCTGTAATATGGATCACCGCCATGATGGGTG...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGGCCAAGAGGACAGGCTaGATAATGCATTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKAKRTG*IMHCTK
Trigger: CTTTGTACAATGCATTATTCAGCCTGTCCTCTTGGC...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCCAATTCAGGTCTCATaGGTGCAAGATTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLPIQVS*VQDSAK
Trigger: CTTTGCAGAATCTTGCACTCATGAGACCTGAATTGG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATAAACCATCTGCCTCCTaGTACCAAACTGCGGGCTAC +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNKPSAS*YQTAGY
Trigger: GTAGCCCGCAGTTTGGTATCAGGAGGCAGATGGTTT...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTAAATTCAGCTGTGGCTaGACAAAGTTCTCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLKFSCG*TKFSFH
Trigger: GTGGAACGAGAACTTTGTTCAGCCACAGCTGAATTT...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATGCCAAGATTGACGAGCTCAGGCTaGAGAAAGGAGTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: IKYHGLEVGQYCVSCMPRLTSSG*RKESKR
Trigger: TCTTTTGGACTCCTTTCTTCAGCCTGAGCTCGTCAA...TCTTGGCATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCCCAAAACCAAGGGAATaGTATCTCTGCAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCPKPRE*YLCNRS
Trigger: ACTTCTGTTGCAGAGATATCATTCCCTTGGTTTTGG...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTATACAGTCCCAATCATaGAGGTTTGCCAAGCACACA +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLIQSQS*RFAKHT
Trigger: TGTGTGCTTGGCAAACCTTCATGATTGGGACTGTAT...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCAAGAGTTTAATGCCCTaGGTTCGCTCATCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTKSLMP*VRSSSS
Trigger: TGAAGAAGATGAGCGAACTCAGGGCATTAAACTCTT...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACATGCCAGTTGTCATGGTaGGTCCTTCGGAAATTGGAT +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTCQLSW*VLRKLD
Trigger: ATCCAATTTCCGAAGGACTCACCATGACAACTGGCA...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGAAGAGATTTACTAGTTaGCCCTCCCATTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKKRFTS*PSHCGR
Trigger: TCTCCCACAATGGGAGGGGCAACTAGTAAATCTCTT...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCCCAGCTAAGTGTTTTTaGACTAGCTTACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFPAKCF*TSLLGP
Trigger: TGGACCAAGTAAGCTAGTGCAAAAACACTTAGCTGG...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGTTCAGGTCTCATGAGTaGAAGATTCTGCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKFRSHE*KILQSL
Trigger: CAGGCTTTGCAGAATCTTGCACTCATGAGACCTGAA...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp CTGCAGCAGTGGGGAACAAAGAGCTTCAAAGATTCTTCTGGGCAGCACTTTACATGCCACCATGCGACCTaGTACTCTTGTTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: LQQWGTKSFKDSSGQHFTCHHAT*YSCFKY
Trigger: ATATTTGAAACAAGAGTAGCAGGTCGCATGGTGGCA...TGTAAAGTGCTGCCCAGAAGAATCTTTGAAGCTCTTTGTTCCCCACTGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGAGCGCGGCACATGTCTaGCACCATGCGACCTGCTAC +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLSAAHV*HHATCY
Trigger: GTAGCAGGTCGCATGGTGGCAGACATGTGCCGCGCT...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp AGGATCCTCCTTCACCACTCAATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTTCTGAAGAAGGAACATaGCACTGGATTCCCAGATTC +
Preference number: 4 (lower is better)
Translates to: RILLHHSMVIPTAVQKASSEEGT*HWIPRF
Trigger: GAATCTGGGAATCCAGTGGCATGTTCCTTCTTCAGA...ACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAAGGAGGATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGGGTAATATTGGACAGTaGTGTTCTAAGCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWGNIGQ*CSKQRA
Trigger: TGCCCTCTGCTTAGAACAGCACTGTCCAATATTACC...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCTTTACTAAAGTCATTTaGATCCACCCCAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFFTKVI*IHPRQC
Trigger: GCATTGCCTGGGGTGGATCCAAATGACTTTAGTAAA...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCCCTCAAATTCAGCTGTaGCTGAACAAAGTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTPQIQL*LNKVLV
Trigger: AACGAGAACTTTGTTCAGCCACAGCTGAATTTGAGG...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCAACAACCATATTCTTTaGCCAGGTGTAGTATCCCCA +
Preference number: 4 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFNNHIL*PGVVSP
Trigger: TGGGGATACTACACCTGGCCAAAGAATATGGTTGTT...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp CTGCAGCAGTGGGGAACAAAGAGCTTCAAAGATTCTTCTGGGCAGCACTTTACAATGAGGCGATATGGTTaGTGTGGTATTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LQQWGTKSFKDSSGQHFTMRRYG*CGIWQR
Trigger: TCTTTGCCAAATACCACACCAACCATATCGCCTCAT...TGTAAAGTGCTGCCCAGAAGAATCTTTGAAGCTCTTTGTTCCCCACTGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCACTTCCGGACAAGTTaGGAAATCAAATGGCAACTG +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLHFRTS*EIKWQL
Trigger: CAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGTTCCTTCCCTCTTCATaGCTCTCCAGACCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATEFLPSS*LSRPKV
Trigger: AACCTTGGGTCTGGAGAGCCATGAAGAGGGAAGGAA...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGAATCCATCAGGTCATTaGTTAGGTTCAGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWNPSGH*LGSGLA
Trigger: GGCAAGTCCTGAACCTAACCAATGACCTGATGGATT...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTTTCACTTCTGTGTCTTaGTCGAGCAATCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLFTSVS*SSNPSG
Trigger: ACCTGATGGATTGCTCGACCAAGACACAGAAGTGAA...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGGGCCCAGGTTGCATTTaGTCTGGGCCAGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLGPGCI*SGPAAS
Trigger: ACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCC...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp AGGATCCTCCTTCACCACTCAATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTATCCCTGCATCATGCTaGTTTCCAGTTTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: RILLHHSMVIPTAVQKASIPASC*FPVLEL
Trigger: CAATTCCAAAACTGGAAATCAGCATGATGCAGGGAT...ACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAAGGAGGATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCTCATTCATTGTAAGCTaGGTTATAACACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTSFIVS*VITLQQ
Trigger: CTGCTGCAGTGTTATAACTCAGCTTACAATGAATGA...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTGCCTTATTTCTCACCTaGCTGTATGAACTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLALFLT*LYELVD
Trigger: ATCTACAAGTTCATACAGTCAGGTGAGAAATAAGGC...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTCTGGGTGCTTTCATGTaGATCTGCAACCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTLGAFM*ICNQMF
Trigger: GAACATTTGGTTGCAGATTCACATGAAAGCACCCAG...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp ATAGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTGGCACACTGCAGTATTTCACCACTCAATGGTaGTTCCAACAGCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: IGKYSEGGLSKPPGTLQYFTTQW*FQQQFK
Trigger: TTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAA...ATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGCTTCATCCACATCCATaGGAGGTTTCAATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKLHPHP*EVSISP
Trigger: TGGAGAAATTGAAACCTCTCATGGATGTGGATGAAG...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTCCACTGGGGCAATCTTaGAAAACAAAGGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFPLGQS*KTKVEA
Trigger: AGCTTCTACCTTTGTTTTTCAAGATTGCCCCAGTGG...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATCCCCAGCATGGCGTTTaGCCAACTCTGCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNPQHGV*PTLQKE
Trigger: TTCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGG...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCTGGTCTTGGATGCCATaGTCATACTGGGTAATTATT +
Preference number: 4 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTWSWMP*SYWVII
Trigger: AATAATTACCCAGTATGATCATGGCATCCAAGACCA...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp ATAGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTGGCACACTGCAGTATTTTCTTAATGAGTTCTaGGACTCTGGTCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: IGKYSEGGLSKPPGTLQYFLNEF*DSGLGC
Trigger: GCATCCAAGACCAGAGTCTCAGAACTCATTAAGAAA...ATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTTTCAGGTCTCATGAGTaGAAGATTCTGCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTFRSHE*KILQSL
Trigger: CAGGCTTTGCAGAATCTTGCACTCATGAGACCTGAA...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACATCTGAAGAAGGAACATaGCACTGGATTCCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTSEEGT*HWIPRF
Trigger: GAATCTGGGAATCCAGTGGCATGTTCCTTCTTCAGA...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTAGTGTCCGTAGCTCATaGTGTAACATTACTCTATCA +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLSVRSS*CNITLS
Trigger: TGATAGAGTAATGTTACAGCATGAGCTACGGACACT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ATAGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTGGCACACTGCAGTATGCACCCTTGAATTGTTaGTGTGTAACACCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: IGKYSEGGLSKPPGTLQYAPLNC*CVTPCL
Trigger: TAGACAAGGTGTTACACAGCAACAATTCAAGGGTGC...ATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTACCAGCTATAATTTCTaGAACACATCGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTTSYNF*NTSLGA
Trigger: AGCACCCAGCGATGTGTTGCAGAAATTATAGCTGGT...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATGGCACTCTCCATTCTTaGTGGGCAAGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNGTLHS*WARPPC
Trigger: ACAAGGTGGCCTTGCCCAGCAAGAATGGAGAGTGCC...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp ATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTTCCGGGGATCTCTGCGTGCATGCCAAGAACTaGTTCTTGCTGTTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: MVIPTAVQKASEVSGDLCVHAKN*FLLFVL
Trigger: TAAAACAAACAGCAAGAAGCAGTTCTTGGCATGCAC...GCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGGTTAGGTTCAGGACTTaGCCTCTTTTCCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATEVRFRT*PLFLPS
Trigger: AGAGGGAAGGAAAAGAGGGCAAGTCCTGAACCTAAC...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCTGTACAGGGTGTGTTaGAAGATGACATTCACCAAT +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLLYRVC*KMTFTN
Trigger: ATTGGTGAATGTCATCTTGCAACACACCCTGTACAG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCGATTACGCCTGTGTATaGCGACACTTAAATACTGTA +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCDYACV*RHLNTV
Trigger: TACAGTATTTAAGTGTCGGCATACACAGGCGTAATC...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTAAAGTCGAATATATGTaGAGAGTTTCCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLKVEYM*RVSWSR
Trigger: TCTGGACCAGGAAACTCTCCACATATATTCGACTTT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACAATCTGCTGGAAAATATaGTCGGCAGCTTTTCACGAG +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTICWKI*SAAFHE
Trigger: CTCGTGAAAAGCTGCCGACCATATTTTCCAGCAGAT...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp TCAAGTCCAGTATACAACTTTGTCTCTTCCAAGGACACCATACTTGGTACTAAGTTGACTGCTTCCCACTaGGAGGTTCAAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSPVYNFVSSKDTILGTKLTASH*EVQASQ
Trigger: CTGAGAAGCTTGAACCTCCCAGTGGGAAGCAGTCAA...CTTAGTACCAAGTATGGTGTCCTTGGAAGAGACAAAGTTGTATACTGGACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGTTTACTAAAGTCATTTaGATCCACCCCAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWFTKVI*IHPRQC
Trigger: GCATTGCCTGGGGTGGATCCAAATGACTTTAGTAAA...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATGAAGGAACATGCCACTaGATTCCCAGATTCCACAAG +
Preference number: 4 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHEGTCH*IPRFHK
Trigger: CTTGTGGAATCTGGGAATCCAGTGGCATGTTCCTTC...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGCCATCCCCACAATGCTaGAGTTTGACGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTPSPQC*SLTSSG
Trigger: GCCTGAGCTCGTCAAACTCCAGCATTGTGGGGATGG...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTGCAATTACTTCTCGGTaGTTCTCTCGAGACAGATCA +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFAITSR*FSRDRS
Trigger: TGATCTGTCTCGAGAGAACCACCGAGAAGTAATTGC...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTGCAATTACTTCTCGGTaGTTCTCTCGAGACAGATCA +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTAITSR*FSRDRS
Trigger: TGATCTGTCTCGAGAGAACCACCGAGAAGTAATTGC...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTTCACCAGCAATAATTTaGGTGGGTTTAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFSPAII*VGLGHP
Trigger: TGGATGCCCTAAACCCACCCAAATTATTGCTGGTGA...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAAGAGGCAAAAACGTCGTaGATTAAACTTATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQEAKTS*IKLIFS
Trigger: GGAAAAGATAAGTTTAATCCACGACGTTTTTGCCTC...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTAAAAACTCCAGTCTGTaGGAAGTGCACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFKNSSL*EVHRHR
Trigger: TCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTT...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTATCCCTGCATCATGCTaGTTTCCAGTTTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFIPASC*FPVLEL
Trigger: CAATTCCAAAACTGGAAATCAGCATGATGCAGGGAT...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCCTCCAAATCAGCTCTTaGAAGAAGTTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTLQISS*KKFLFL
Trigger: AAGAAAAAGGAACTTCTTTCAAGAGCTGATTTGGAG...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATGTAGCTGTGAGCTGGTaGGGTTCTGTTAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNVAVSW*GSVNVS
Trigger: AGAGACATTAACAGAACCTCACCAGCTCACAGCTAC...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATAAGCACACACCACTGTaGTTTCCAAGGAGACAGTAC +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNKHTPL*FPRRQY
Trigger: GTACTGTCTCCTTGGAAATCACAGTGGTGTGTGCTT...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGTGCTTGGCTAAGCCCTaGAGAAACAATCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTCLAKP*RNNRWP
Trigger: TGGCCAGCGATTGTTTCTTCAGGGCTTAGCCAAGCA...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ATAGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTGGCACACTGCAGTATAAACAATCTCACTATTaGTGGCTTTTCCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: IGKYSEGGLSKPPGTLQYKQSHY*WLFQGH
Trigger: ATGTCCCTGGAAAAGCCATCAATAGTGAGATTGTTT...ATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGTCCATAACATGGTTCTaGATTTCTTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKSITWF*ISSSTS
Trigger: GGATGTGGATGAAGAAATTCAGAACCATGTTATGGA...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTCAAAGTTGCTCAAAATaGATCTGCATAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFQSCSK*ICIGLS
Trigger: GGACAGTCCTATGCAGATTCATTTTGAGCAACTTTG...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTGCAGTTGGTCATCAGTaGATTGCTGTTTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFAVGHQ*IAVYVP
Trigger: AGGAACATAAACAGCAATTCACTGATGACCAACTGC...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTCCAGCTAAGTGTTTTTaGACTAGCTTACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTPAKCF*TSLLGP
Trigger: TGGACCAAGTAAGCTAGTGCAAAAACACTTAGCTGG...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTTGCCACCATGCGACCTaGTACTCTTGTTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFCHHAT*YSCFKY
Trigger: ATATTTGAAACAAGAGTAGCAGGTCGCATGGTGGCA...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp TATACAAGCTCCCCAGTCATTATAAGTTTCTACGGTAATATTGGACAGTGCTGTCAGGGCAGGTTTCTTTaGTCCACACCATCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: YTSSPVIISFYGNIGQCCQGRFL*STPSSK
Trigger: CTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTG...ACAGCACTGTCCAATATTACCGTAGAAACTTATAATGACTGGGGAGCTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCAAATATAATCTGTTCTaGCTCTGTCATATCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCKYNLF*LCHILP
Trigger: AGGGAGGATATGACAGAGGCAGAACAGATTATATTT...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTAAATATAATCTGTTCTaGCTCTGTCATATCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLKYNLF*LCHILP
Trigger: AGGGAGGATATGACAGAGGCAGAACAGATTATATTT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCAAGTTGTTCTGTAACTaGTGTAGAAAAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCKLFCN*CRKGSS
Trigger: GGAAGATCCTTTTCTACAGCAGTTACAGAACAACTT...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTTCCGGGGATCTCTGCTGTTGTGTAAAAGGTTaGATCTGTACAATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: MVIPTAVQKASEVSGDLCCCVKG*ICTMSC
Trigger: GCAAGACATTGTACAGATGCAACCTTTTACACAACA...GCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTTGTTGTGTAAAAGGTTaGATCTGTACAATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLCCVKG*ICTMSC
Trigger: GCAAGACATTGTACAGATGCAACCTTTTACACAACA...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGAGGTTGCATTTGATCTaGGCCAGCTGCAAGTCGGAC +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTRLHLI*ASCKSD
Trigger: GTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTAAAGTCGAATATATGTaGAGAGTTTCCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLKVEYM*RVSWSR
Trigger: TCTGGACCAGGAAACTCTCCACATATATTCGACTTT...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCTATCTTTGGTACATATaGATCCCAATCTATGTACCC +
Preference number: 4 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCYLWYI*IPIYVP
Trigger: GGGTACATAGATTGGGATCCATATGTACCAAAGATA...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATCTTCAAAGATTCTTCTaGGCAGCACTTTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHLQRFF*AALYSS
Trigger: GCTGCTGTAAAGTGCTGCCCAGAAGAATCTTTGAAG...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTATAACACTGCAGCAGTaGGGAACAAAGAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTITLQQ*GTKSFK
Trigger: TTTGAAGCTCTTTGTTCCCCACTGCTGCAGTGTTAT...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp CTGCAGCAGTGGGGAACAAAGAGCTTCAAAGATTCTTCTGGGCAGCACTTTACAAAATGTAGGGTTCTTTaGAGAATCTTTACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LQQWGTKSFKDSSGQHFTKCRVL*RIFTSC
Trigger: GCAGCTTGTAAAGATTCTCCAAAGAACCCTACATTT...TGTAAAGTGCTGCCCAGAAGAATCTTTGAAGCTCTTTGTTCCCCACTGCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACAATGAGGCGATATGGTTaGTGTGGTATTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTMRRYG*CGIWQR
Trigger: TCTTTGCCAAATACCACACCAACCATATCGCCTCAT...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATGAGAGCCACCACAGATaGTACCTGAGGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNESHHR*YLRVWN
Trigger: ATTCCACACCCTCAGGTACCATCTGTGGTGGCTCTC...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATCCAGCGCCCATTATTTaGAGGATGGTAAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHPAPII*RMVKRC
Trigger: ACATCTTTTTACCATCCTTCAAATAATGGGCGCTGG...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp TATACAAGCTCCCCAGTCATTATAAGTTTCTACGGTAATATTGGACAGTGCTGTGTAGCTGTGAGCTGGTaGGGTTCTGTTAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: YTSSPVIISFYGNIGQCCVAVSW*GSVNVS
Trigger: AGAGACATTAACAGAACCTCACCAGCTCACAGCTAC...ACAGCACTGTCCAATATTACCGTAGAAACTTATAATGACTGGGGAGCTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACAAAACAATCTCACTATTaGTGGCTTTTCCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTKQSHY*WLFQGH
Trigger: ATGTCCCTGGAAAAGCCATCAATAGTGAGATTGTTT...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp TCAAGTCCAGTATACAACTTTGTCTCTTCCAAGGACACCATACTTGGTACTAAGCCACTGGGGCAATCTTaGAAAACAAAGGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSPVYNFVSSKDTILGTKPLGQS*KTKVEA
Trigger: AGCTTCTACCTTTGTTTTTCAAGATTGCCCCAGTGG...CTTAGTACCAAGTATGGTGTCCTTGGAAGAGACAAAGTTGTATACTGGACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATGCAGTTGGTCATCAGTaGATTGCTGTTTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHAVGHQ*IAVYVP
Trigger: AGGAACATAAACAGCAATTCACTGATGACCAACTGC...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTTGGTCTTGGATGCCATaGTCATACTGGGTAATTATT +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFWSWMP*SYWVII
Trigger: AATAATTACCCAGTATGATCATGGCATCCAAGACCA...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCAGAGTAGAAAATGTTaGTATGAACTGGAATGTGAT +
Preference number: 4 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLQSRKC*YELECD
Trigger: ATCACATTCCAGTTCATAGCAACATTTTCTACTCTG...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTAGTGTCCGTAGCTCATaGTGTAACATTACTCTATCA +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTSVRSS*CNITLS
Trigger: TGATAGAGTAATGTTACAGCATGAGCTACGGACACT...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAACAGGGCAGGTTTCTTTaGTCCACACCATCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQQGRFL*STPSSK
Trigger: CTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTG...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGCTTTCGAACTACAATTaGATCATGGTTGAGATTCTC +
Preference number: 4 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWLSNYN*IMVEIL
Trigger: GAGAATCTCAACCATGATGCAATTGTAGTTCGAAAG...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGTACTTCAGTAGTCTGTaGAATAGTTCAGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATEYFSSL*NSSGTL
Trigger: GAGAGTGCCTGAACTATTGCACAGACTACTGAAGTA...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGAGGTTGCATTTGATCTaGGCCAGCTGCAAGTCGGAC +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLRLHLI*ASCKSD
Trigger: GTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCT...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATTTGACTGCTTCCCACTaGGAGGTTCAAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNLTASH*EVQASQ
Trigger: CTGAGAAGCTTGAACCTCCCAGTGGGAAGCAGTCAA...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGACTCTCCATTCTTGCTaGGCAAGGCCACCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTTLHSC*ARPPCS
Trigger: ACTACAAGGTGGCCTTGCCCAGCAAGAATGGAGAGT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGGGACATGAGGCGATATaGTTGGTGTGGTATTTGGCA +
Preference number: 4 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSGHEAI*LVWYLA
Trigger: TGCCAAATACCACACCAACCATATCGCCTCATGTCC...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATACTCTGCAGAAGGAATaGTATCTCCTACAGAACCAG +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNTLQKE*YLLQNQ
Trigger: CTGGTTCTGTAGGAGATACCATTCCTTCTGCAGAGT...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGAGTTGGGAAATCAAATaGCAACTGAGAAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATESWEIK*QLRSCG
Trigger: TCCACAGCTTCTCAGTTGCCATTTGATTTCCCAACT...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATCACTTCCGGACAAGTTaGGAAATCAAATGGCAACTG +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNHFRTS*EIKWQL
Trigger: CAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTG...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATTTCACTTCTGTGTCTTaGTCGAGCAATCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNFTSVS*SSNPSG
Trigger: ACCTGATGGATTGCTCGACCAAGACACAGAAGTGAA...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp AGGATCCTCCTTCACCACTCAATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTAAAAATGGCATTCAGTaGGTACAAAGCCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: RILLHHSMVIPTAVQKASKNGIQ*VQSPKS
Trigger: TGATTTTGGGCTTTGTACCCACTGAATGCCATTTTT...ACTGGCTTTTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAAGGAGGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCAACTGAAATCAGTTTaGCACTACTTTATACAGGGA +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLQLKSV*HYFIQG
Trigger: TCCCTGTATAAAGTAGTGCCAAACTGATTTCAGTTG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
3UTR CAA 72 bp AACGGAGGTAGGAGGTTTCCAGAGCCAATTAAACAGTaGTGCACTATAGTCAGACTCTGTAGAATATCATCT +
Preference number: 4 (lower is better)
Translates to: NGGRRFPEPIKQ*CTIVRLCRISS
Trigger: AGATGATATTCTACAGAGTCTGACTATAGTGCACAACTGTTTAATTGGCTCTGGAAACCTCCTACCTCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATAAGTCTGTAACATCTTaGTCAGTAAGCTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHKSVTS*SVSLWL
Trigger: TAGCCACAAGCTTACTGATCAAGATGTTACAGACTT...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGTCATTCATTGTAAGCTaGGTTATAACACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATESFIVS*VITLQQ
Trigger: CTGCTGCAGTGTTATAACTCAGCTTACAATGAATGA...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATGTAGAACGGAGAAGATaGTGCAAAAGGTTACAAGAC +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNVERRR*CKRLQD
Trigger: GTCTTGTAACCTTTTGCATCATCTTCTCCGTTCTAC...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATTTGACGAGCTCAGGCTaGAGAAAGGAGTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNLTSSG*RKESKR
Trigger: TCTTTTGGACTCCTTTCTTCAGCCTGAGCTCGTCAA...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTGTTTCATACTGCCTATaGATCTTTTCTGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFVSYCL*IFSARS
Trigger: TGATCTTGCAGAAAAGATTCATAGGCAGTATGAAAC...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATGATACCAGCAACAGCTaGGATAGCCATCTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNDTSNS*DSHLSN
Trigger: GTTCGAAAGATGGCTATCTCAGCTGTTGCTGGTATC...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATTTCACCACTCAATGGTaGTTCCAACAGCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNFTTQW*FQQQFK
Trigger: TTTGAACTGCTGTTGGAATCACCATTGAGTGGTGAA...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATGTCATCTCAATAGGCTaGGGATCATTTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNVISIG*GSFRCA
Trigger: TGCACATCTAAATGATCCTCAGCCTATTGAGATGAC...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTCCACCTTTTCAAATGTCCAGTGCTTAGAACCTCTGATTAAACCAGCTATATGCATAATAGCATGGTaGCACAAGAAGATCGGTGAG +
Preference number: 4 (lower is better)
Translates to: FSTFSNVQCLEPLIKPAICIIAW*HKKIGE
Trigger: CTCACCGATCTTCTTGTGTCACCATGCTATTATGCA...TATAGCTGGTTTAATCAGAGGTTCTAAGCACTGGACATTTGAAAAGGTGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATTTTCTTAATGAGTTCTaGGACTCTGGTCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNFLNEF*DSGLGC
Trigger: GCATCCAAGACCAGAGTCTCAGAACTCATTAAGAAA...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGCTTCAGGAAACCATCTaGCTCCTGATACCAAACTGC +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTLQETI*LLIPNC
Trigger: GCAGTTTGGTATCAGGAGGCAGATGGTTTCCTGAAG...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGTTTCCATCCCCACAATaGTGGAGTTTGACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTFPSPQ*WSLTSS
Trigger: TGAGCTCGTCAAACTCCAGCATTGTGGGGATGGAAA...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTCCAATTAAACAGTTGTaGACTATAGTCAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFPIKQL*TIVRLC
Trigger: ACAGAGTCTGACTATAGTGCACAACTGTTTAATTGG...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATCCAATCATGAAGGTTTaGCAAGCACACACCACTGTG +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNPIMKV*QAHTTV
Trigger: CACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGG...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTTTCGAACTACAATTaGATCATGGTTGAGATTCTC +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTLSNYN*IMVEIL
Trigger: GAGAATCTCAACCATGATGCAATTGTAGTTCGAAAG...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp TTCTCCACCTTTTCAAATGTCCAGTGCTTAGAACCTCTGATTAAACCAGCTATACAACACATCGCTGGGTaGTTTCATGTGAATCTGCAA +
Preference number: 4 (lower is better)
Translates to: FSTFSNVQCLEPLIKPAIQHIAG*FHVNLQ
Trigger: TTGCAGATTCACATGAAAGCACCCAGCGATGTGTTG...TATAGCTGGTTTAATCAGAGGTTCTAAGCACTGGACATTTGAAAAGGTGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATAGAAAAGGATCTTCCTaGACTTGCCATCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNRKGSS*TCHQPF
Trigger: AAATGGCTGATGGCAAGTGCAGGAAGATCCTTTTCT...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAAGTTAGGTTCAGGACTTaGCCTCTTTTCCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQVRFRT*PLFLPS
Trigger: AGAGGGAAGGAAAAGAGGGCAAGTCCTGAACCTAAC...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGGTCTCTTCTCTTGTTTaGTCCAATGTGCTACTTTCT +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATEVSSLV*SNVLLS
Trigger: AGAAAGTAGCACATTGGAGCAAACAAGAGAAGAGAC...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATCTAGCATCTCAGCGGTaGCATCTGCTGGAAAATATG +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNLASQR*HLLENM
Trigger: CATATTTTCCAGCAGATGCCACCGCTGAGATGCTAG...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTTATCTTTGGTACATATaGATCCCAATCTATGTACCC +
Preference number: 4 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFYLWYI*IPIYVP
Trigger: GGGTACATAGATTGGGATCCATATGTACCAAAGATA...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTAAATGTAGGGTTCTTTaGAGAATCTTTACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: EISLALLYTGITPVYADTKCRVL*RIFTSC
Trigger: GCAGCTTGTAAAGATTCTCCAAAGAACCCTACATTT...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGCTTGTCAAAGCCACCTaGCACACTGCAGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTLVKAT*HTAVFC
Trigger: ACAGAATACTGCAGTGTGCCAGGTGGCTTTGACAAG...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTATGGTCAGCTTTTTGTaGGTTCTTTTTAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLMVSFL*VLFSCL
Trigger: TAAACAGCTAAAAAGAACCCACAAAAAGCTGACCAT...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACAGAGGCAAAAACGTCGTaGATTAAACTTATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTEAKTS*IKLIFS
Trigger: GGAAAAGATAAGTTTAATCCACGACGTTTTTGCCTC...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGGGTTATAAAATACCATaGTCTGGAGGTAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATEGYKIP*SGGRSV
Trigger: TACTGACCTACCTCCAGACCATGGTATTTTATAACC...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATGCCAAGAGGACAGGCTaGATAATGCATTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNAKRTG*IMHCTK
Trigger: CTTTGTACAATGCATTATTCAGCCTGTCCTCTTGGC...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTCCACCTTTTCAAATGTCCAGTGCTTAGAACCTCTGATTAAACCAGCTATAGTAGAACGGAGAAGATaGTGCAAAAGGTTACAAGAC +
Preference number: 4 (lower is better)
Translates to: FSTFSNVQCLEPLIKPAIVERRR*CKRLQD
Trigger: GTCTTGTAACCTTTTGCATCATCTTCTCCGTTCTAC...TATAGCTGGTTTAATCAGAGGTTCTAAGCACTGGACATTTGAAAAGGTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGGTCATCTCAATAGGCTaGGGATCATTTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSVISIG*GSFRCA
Trigger: TGCACATCTAAATGATCCTCAGCCTATTGAGATGAC...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAATGCATAATAGCATGGTaGCACAAGAAGATCGGTGAG +
Preference number: 4 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQCIIAW*HKKIGE
Trigger: CTCACCGATCTTCTTGTGTCACCATGCTATTATGCA...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAACATTGTGGGAGATTTTaGACTGAAACCCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQHCGRF*TETQRP
Trigger: TGGCCTTTGGGTTTCAGTGCAAAATCTCCCACAATG...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGAAGAGATTTACTAGTTaGCCCTCCCATTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTKRFTS*PSHCGR
Trigger: TCTCCCACAATGGGAGGGGCAACTAGTAAATCTCTT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACAGAGTAGAAAATGTTaGTATGAACTGGAATGTGAT +
Preference number: 4 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTQSRKC*YELECD
Trigger: ATCACATTCCAGTTCATAGCAACATTTTCTACTCTG...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATCAACACATCGCTGGGTaGTTTCATGTGAATCTGCAA +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNQHIAG*FHVNLQ
Trigger: TTGCAGATTCACATGAAAGCACCCAGCGATGTGTTG...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGACCAGCTATAATTTCTaGAACACATCGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTTSYNF*NTSLGA
Trigger: AGCACCCAGCGATGTGTTGCAGAAATTATAGCTGGT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGACTGTGTATCGTGCATaGCAAGAACTGCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTTVYRA*QELLLA
Trigger: AGCAAGAAGCAGTTCTTGGCATGCACGATACACAGT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATCAGTACTGTGTATCGTaGATGCCAAGAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNQYCVS*MPRTAS
Trigger: AGAAGCAGTTCTTGGCATGCACGATACACAGTACTG...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGGTCATCAGTGAATTaGTGTTTATGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSWSSVN*CLCSCQ
Trigger: CTGGCAGGAACATAAACAGCAATTCACTGATGACCA...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAACTTCAAAGATTCTTCTaGGCAGCACTTTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQLQRFF*AALYSS
Trigger: GCTGCTGTAAAGTGCTGCCCAGAAGAATCTTTGAAG...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCTTGTCAAAGCCACCTaGCACACTGCAGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLLVKAT*HTAVFC
Trigger: ACAGAATACTGCAGTGTGCCAGGTGGCTTTGACAAG...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTACCAAATGTTCTAAATaGGGCTTCAGAACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFTKCSK*GFRTGR
Trigger: CCTGCCAGTTCTGAAGCCCCATTTAGAACATTTGGT...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGACCAAATGTTCTAAATaGGGCTTCAGAACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTTKCSK*GFRTGR
Trigger: CCTGCCAGTTCTGAAGCCCCATTTAGAACATTTGGT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGGGTTGGTGTGGTATTTaGCAAAGATACATCTATCAT +
Preference number: 4 (lower is better)
Translates to: ISILETLPDKLGNQMATEGWCGI*QRYIYH
Trigger: ATGATAGATGTATCTTTGCCAAATACCACACCAACC...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATACTCTGCAGAAGGAATaGTATCTCCTACAGAACCAG +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNTLQKE*YLLQNQ
Trigger: CTGGTTCTGTAGGAGATACCATTCCTTCTGCAGAGT...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp TATACAAGCTCCCCAGTCATTATAAGTTTCTACGGTAATATTGGACAGTGCTGTGTGAGAACAAGCAGTTaGTCATCAGTGAATTGCTGT +
Preference number: 4 (lower is better)
Translates to: YTSSPVIISFYGNIGQCCVRTSS*SSVNCC
Trigger: ACAGCAATTCACTGATGACCAACTGCTTGTTCTCAC...ACAGCACTGTCCAATATTACCGTAGAAACTTATAATGACTGGGGAGCTTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAACCAAAACCAAGGGAATaGTATCTCTGCAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQPKPRE*YLCNRS
Trigger: ACTTCTGTTGCAGAGATATCATTCCCTTGGTTTTGG...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp TTTGGAGAATCTTTACAAGCTGCTCCCTATAAAGAAGCAACTTCCTTCCATCCAGTTTCATACTGCCTATaGATCTTTTCTGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: FGESLQAAPYKEATSFHPVSYCL*IFSARS
Trigger: TGATCTTGCAGAAAAGATTCATAGGCAGTATGAAAC...TGGATGGAAGGAAGTTGCTTCTTTATAGGGAGCAGCTTGTAAAGATTCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATCTTCATCCACATCCATaGGAGGTTTCAATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNLHPHP*EVSISP
Trigger: TGGAGAAATTGAAACCTCTCATGGATGTGGATGAAG...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGACACAAGAAGATCGGTaGGAACAAGCAGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLTQEDR*EQAVGH
Trigger: ATGACCAACTGCTTGTTCTCACCGATCTTCTTGTGT...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTGCACCCTTGAATTGTTaGTGTGTAACACCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFAPLNC*CVTPCL
Trigger: TAGACAAGGTGTTACACAGCAACAATTCAAGGGTGC...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGGGTAATATTGGACAGTaGTGTTCTAAGCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLGNIGQ*CSKQRA
Trigger: TGCCCTCTGCTTAGAACAGCACTGTCCAATATTACC...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGAGAAAAGGATCTTCCTaGACTTGCCATCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTRKGSS*TCHQPF
Trigger: AAATGGCTGATGGCAAGTGCAGGAAGATCCTTTTCT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR GCA 90 bp TTTGGAGAATCTTTACAAGCTGCTCCCTATAAAGAAGCAACTTCCTTCCATCCAAAGTTGTTCTGTAACTaGTGTAGAAAAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: FGESLQAAPYKEATSFHPKLFCN*CRKGSS
Trigger: GGAAGATCCTTTTCTACAGCAGTTACAGAACAACTT...TGGATGGAAGGAAGTTGCTTCTTTATAGGGAGCAGCTTGTAAAGATTCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR GCA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGTGGTCATCAGTGAATTaGTGTTTATGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTWSSVN*CLCSCQ
Trigger: CTGGCAGGAACATAAACAGCAATTCACTGATGACCA...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAACCTCAAATTCAGCTGTaGCTGAACAAAGTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQPQIQL*LNKVLV
Trigger: AACGAGAACTTTGTTCAGCCACAGCTGAATTTGAGG...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATGGTTGGTGTGGTATTTaGCAAAGATACATCTATCAT +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNGWCGI*QRYIYH
Trigger: ATGATAGATGTATCTTTGCCAAATACCACACCAACC...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTGTGAGAACAAGCAGTTaGTCATCAGTGAATTGCTGT +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFVRTSS*SSVNCC
Trigger: ACAGCAATTCACTGATGACCAACTGCTTGTTCTCAC...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATAAAAATGGCATTCAGTaGGTACAAAGCCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNKNGIQ*VQSPKS
Trigger: TGATTTTGGGCTTTGTACCCACTGAATGCCATTTTT...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp TTCTCCACCTTTTCAAATGTCCAGTGCTTAGAACCTCTGATTAAACCAGCTATATTTTCTTTAACAAGTTaGTCAAAAGGCGGGCAAATC +
Preference number: 4 (lower is better)
Translates to: FSTFSNVQCLEPLIKPAIFSLTS*SKGGQI
Trigger: GATTTGCCCGCCTTTTGATCAACTTGTTAAAGAAAA...TATAGCTGGTTTAATCAGAGGTTCTAAGCACTGGACATTTGAAAAGGTGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR TCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCCAGCGCCCATTATTTaGAGGATGGTAAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLPAPII*RMVKRC
Trigger: ACATCTTTTTACCATCCTTCAAATAATGGGCGCTGG...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATAAGTCTGTAACATCTTaGTCAGTAAGCTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNKSVTS*SVSLWL
Trigger: TAGCCACAAGCTTACTGATCAAGATGTTACAGACTT...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTGCCTTATTTCTCACCTaGCTGTATGAACTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFALFLT*LYELVD
Trigger: ATCTACAAGTTCATACAGTCAGGTGAGAAATAAGGC...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTTCCATAACATGGTTCTaGATTTCTTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFSITWF*ISSSTS
Trigger: GGATGTGGATGAAGAAATTCAGAACCATGTTATGGA...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR TCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGAAGAGTTTAATGCCCTaGGTTCGCTCATCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLKSLMP*VRSSSS
Trigger: TGAAGAAGATGAGCGAACTCAGGGCATTAAACTCTT...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR GCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTGTGCATGCCAAGAACTaGTTCTTGCTGTTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFVHAKN*FLLFVL
Trigger: TAAAACAAACAGCAAGAAGCAGTTCTTGGCATGCAC...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp TTTGGAGAATCTTTACAAGCTGCTCCCTATAAAGAAGCAACTTCCTTCCATCCAATGGTCAGCTTTTTGTaGGTTCTTTTTAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: FGESLQAAPYKEATSFHPMVSFL*VLFSCL
Trigger: TAAACAGCTAAAAAGAACCCACAAAAAGCTGACCAT...TGGATGGAAGGAAGTTGCTTCTTTATAGGGAGCAGCTTGTAAAGATTCTCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CCA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATATTGTCATTTTCCACTaGGGCAATCTTGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: FLMSSETLVLDAMIILGNIVIFH*GNLEKQ
Trigger: TTGTTTTTCAAGATTGCCCCAGTGGAAAATGACAAT...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTGGTTATAAAATACCATaGTCTGGAGGTAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFGYKIP*SGGRSV
Trigger: TACTGACCTACCTCCAGACCATGGTATTTTATAACC...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTGACCTGTATTACAGATaGGTATTCTCCATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFDLYYR*VFSIPS
Trigger: ACTTGGAATGGAGAATACCCATCTGTAATACAGGTC...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAAGACCTGTATTACAGATaGGTATTCTCCATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQDLYYR*VFSIPS
Trigger: ACTTGGAATGGAGAATACCCATCTGTAATACAGGTC...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR TCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCTCCAAATCAGCTCTTaGAAGAAGTTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLLQISS*KKFLFL
Trigger: AAGAAAAAGGAACTTCTTTCAAGAGCTGATTTGGAG...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CCA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTATTGTCATTTTCCACTaGGGCAATCTTGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: VASVQCLANAISTVYTLFIVIFH*GNLEKQ
Trigger: TTGTTTTTCAAGATTGCCCCAGTGGAAAATGACAAT...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CCA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGATTTCTTTGGAACATTaGGTGAGGATTGTACTAAAC +
Preference number: 4 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLISLEH*VRIVLN
Trigger: GTTTAGTACAATCCTCACCCAATGTTCCAAAGAAAT...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS GCA 90 bp CCCCACCCCTCTCCGGGCTCCGCCTCCTCCGCGTCTTCGTCGCCCTaGGGCCGCTGGCGGCCCGTCGCCCTCGGACCGATCGCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: PHPSPGSASSASSSP*GRWRPVALGPIARP
Trigger: GGGCCTAGCGATCGGTCCGAGGGCGACGGGCCGCCAGCGGCCGCAGGGCGACGAAGACGCGGAGGAGGCGGAGCCCGGAGAGGGGTGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS CCA 90 bp CCCTCGGACCGATCGCTAGGCCCCCTTCCCTGGCCGGCGTGCTGCTaGGCCCCACGCGGCTCTCAGTTCGTTGGCGGCGGCAGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: PSDRSLGPLPWPACC*APRGSQFVGGGSGR
Trigger: GCGGCCGCTGCCGCCGCCAACGAACTGAGAGCCGCGTGGGGCCCAGCAGCACGCCGGCCAGGGAAGGGGGCCTAGCGATCGGTCCGAGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS GCA 90 bp CCGTCGCCCTCGGACCGATCGCTAGGCCCCCTTCCCTGGCCGGCGTaGTGCTGGGCCCCACGCGGCTCTCAGTTCGTTGGCGGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: PSPSDRSLGPLPWPA*CWAPRGSQFVGGGS
Trigger: GCTGCCGCCGCCAACGAACTGAGAGCCGCGTGGGGCCCAGCAGCACGCCGGCCAGGGAAGGGGGCCTAGCGATCGGTCCGAGGGCGACGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS TCA 90 bp CGGGCCACAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTTGCATTTaGTCTGGGCCAGCTGCAAGTCGGACTCGGCGTCTAGCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: RATALGAARPGPGCI*SGPAASRTRRLAAP
Trigger: CGGAGCGGCTAGACGCCGAGTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CCA 90 bp GTGGAGAGTTTCCTGGTCCAGAAGAGGCCCCCGGGCCACAGCTCTTaGAGCTGCACGGCCCGGCCCAGGTTGCATTTGATCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VESFLVQKRPPGHSS*SCTARPRLHLIWAS
Trigger: GCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACCAGGAAACTCTCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS GCA 90 bp AGTTTCCTGGTCCAGAAGAGGCCCCCGGGCCACAGCTCTTGGAGCTaGACGGCCCGGCCCAGGTTGCATTTGATCTGGGCCAGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: SFLVQKRPPGHSSWS*TARPRLHLIWASCK
Trigger: CTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACCAGGAAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS-3UTR CAA 90 bp ACATGCCACTGGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGCACAAGTCCCCGGGTTaGCCCCAGTCCTTGATAGGA +
Preference number: 5 (lower is better)
Translates to: TCHWIPRFHKSPGLPQSLHKSPG*PQSLIG
Trigger: TCCTATCAAGGACTGGGGCAAACCCGGGGACTTGTG...CAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp CTGCAGCAGTGGGGAACAAAGAGCTTCAAAGATTCTTCTGGGCAGCACTTTACAACGGCCCGGCCCAGGTaGCATTTGATCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LQQWGTKSFKDSSGQHFTTARPR*HLIWAS
Trigger: GCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGT...TGTAAAGTGCTGCCCAGAAGAATCTTTGAAGCTCTTTGTTCCCCACTGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ACATGCCACTGGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGCTTCACTTCTGTGTCTaGGTCGAGCAATCCATCAGG +
Preference number: 5 (lower is better)
Translates to: TCHWIPRFHKSPGLPQSLLHFCV*VEQSIR
Trigger: CCTGATGGATTGCTCGACCAAGACACAGAAGTGAAG...CAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCGGCCCAGGTTGCATTaGATCTGGGCCAGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLRPRLH*IWASCK
Trigger: CTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCG...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTACGGCCCGGCCCAGGTaGCATTTGATCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFTARPR*HLIWAS
Trigger: GCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGT...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACATGCCACTGGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGCATGAGGCGATATGGTaGGTGTGGTATTTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TCHWIPRFHKSPGLPQSLHEAIW*VWYLAK
Trigger: CTTTGCCAAATACCACACCAACCATATCGCCTCATG...CAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTAGGCACTCTCCATTCTaGCTGGGCAAGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLRHSPF*LGKATL
Trigger: CAAGGTGGCCTTGCCCAGCAAGAATGGAGAGTGCCT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACATGCCACTGGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGACACTTCCGGACAAGTaGGGAAATCAAATGGCAACT +
Preference number: 5 (lower is better)
Translates to: TCHWIPRFHKSPGLPQSLTLPDK*GNQMAT
Trigger: AGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGT...CAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATGCGGCTCTCAGTTCGTaGGCGGCGGCAGCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNAALSS*AAAAAA
Trigger: AGCGGCCGCTGCCGCCGCCAACGAACTGAGAGCCGC...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp AGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATCGGCCCAGGTTGCATTaGATCTGGGCCAGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RGYKIPWSGGRSVLCIVHRPRLH*IWASCK
Trigger: CTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCG...ATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ACATGCCACTGGATTCCCAGATTCCACAAGTCCCCGGGTTTGCCCCAGTCCTTGTGGTTGGTGTGGTATTaGGCAAAGATACATCTATCA +
Preference number: 5 (lower is better)
Translates to: TCHWIPRFHKSPGLPQSLWLVWY*AKIHLS
Trigger: TGATAGATGTATCTTTGCCAAATACCACACCAACCA...CAAGGACTGGGGCAAACCCGGGGACTTGTGGAATCTGGGAATCCAGTGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTTATTCAGAAGGAGGCTaGTCAAAGCCACCTGGCACA +
Preference number: 5 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLYSEGG*SKPPGT
Trigger: TGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATA...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCCCCAATCATGAAGGTTaGCCAAGCACACACCACTGT +
Preference number: 5 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFPNHEG*PSTHHC
Trigger: ACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGGG...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTACCCCAGCATGGCGTTaGACCAACTCTGCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFTPAWR*TNSAEG
Trigger: TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGT...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ATAGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTGGCACACTGCAGTATTATTCAGAAGGAGGCTaGTCAAAGCCACCTGGCACA +
Preference number: 5 (lower is better)
Translates to: IGKYSEGGLSKPPGTLQYYSEGG*SKPPGT
Trigger: TGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATA...ATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCCAAGGCACCCTTGAATaGTTGCTGTGTAACACCTTG +
Preference number: 5 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCQGTLE*LLCNTL
Trigger: CAAGGTGTTACACAGCAACAATTCAAGGGTGCCTTG...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAACAGTACAAGGCACCCTaGAATTGTTGCTGTGTAACA +
Preference number: 5 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQQYKAP*NCCCVT
Trigger: TGTTACACAGCAACAATTCAAGGGTGCCTTGTACTG...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCATCACCAGCAATAATTaGGGTGGGTTTAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTITSNN*GGFRAS
Trigger: GGATGCCCTAAACCCACCCAAATTATTGCTGGTGAT...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTTCCGGGGATCTCTGCAAGTACCAAAGGCACTaGATGAGGGTAAAGCAACCC +
Preference number: 5 (lower is better)
Translates to: MVIPTAVQKASEVSGDLCKYQRH*MRVKQP
Trigger: GGGTTGCTTTACCCTCATCAAGTGCCTTTGGTACTT...GCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCTTCACTTCTGTGTCTaGGTCGAGCAATCCATCAGG +
Preference number: 5 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLLHFCV*VEQSIR
Trigger: CCTGATGGATTGCTCGACCAAGACACAGAAGTGAAG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS CCA 90 bp GGTATTACCAATTCAGGTCTCATGAGTGCAAGATTCTGCAAAGCCTaGGCTGCTTCTAGACTACCGGTTTTGCTAAACATAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: GITNSGLMSARFCKA*AASRLPVLLNIAKR
Trigger: CCTCTTGGCTATGTTTAGCAAAACCGGTAGTCTAGAAGCAGCCCAGGCTTTGCAGAATCTTGCACTCATGAGACCTGAATTGGTAATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCTCTAGACTACCGGTTTaGCTAAACATAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTSRLPV*LNIAKR
Trigger: CCTCTTGGCTATGTTTAGCAAAACCGGTAGTCTAGA...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCTCTAGACTACCGGTTTaGCTAAACATAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFSRLPV*LNIAKR
Trigger: CCTCTTGGCTATGTTTAGCAAAACCGGTAGTCTAGA...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCGTCCAGTATACAACTTaGTCTCTTCCAAGGACACCA +
Preference number: 5 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFVQYTT*SLPRTP
Trigger: TGGTGTCCTTGGAAGAGACAAAGTTGTATACTGGAC...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGGGCACCCTTGAATTGTaGCTGTGTAACACCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKGTLEL*LCNTLS
Trigger: AGACAAGGTGTTACACAGCAACAATTCAAGGGTGCC...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGGCACCCTTGAATTGTaGCTGTGTAACACCTTGTCT +
Preference number: 5 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLGTLEL*LCNTLS
Trigger: AGACAAGGTGTTACACAGCAACAATTCAAGGGTGCC...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCAAGGCACCCTTGAATaGTTGCTGTGTAACACCTTG +
Preference number: 5 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLQGTLE*LLCNTL
Trigger: CAAGGTGTTACACAGCAACAATTCAAGGGTGCCTTG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTCCCAATCATGAAGGTTaGCCAAGCACACACCACTGT +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFPNHEG*PSTHHC
Trigger: ACAGTGGTGTGTGCTTGGCAAACCTTCATGATTGGG...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCAAACAACCATATTCTTaGGCCAGGTGTAGTATCCCC +
Preference number: 5 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFKQPYS*ARCSIP
Trigger: GGGGATACTACACCTGGCCAAAGAATATGGTTGTTT...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCAGGATCTTCCTGCACTaGCCATCAGCCATTTCAATA +
Preference number: 5 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFRIFLH*PSAISI
Trigger: TATTGAAATGGCTGATGGCAAGTGCAGGAAGATCCT...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATACCCCAGCATGGCGTTaGACCAACTCTGCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: FLMSSETLVLDAMIILGNTPAWR*TNSAEG
Trigger: TCCTTCTGCAGAGTTGGTCAAACGCCATGCTGGGGT...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp AATTCGAGCAGTAAACTCAGGGACATGAGGCGATATGGTTGGTGTGGTATTTGGGGTGAGAACAAGCAGTaGGTCATCAGTGAATTGCTG +
Preference number: 5 (lower is better)
Translates to: NSSSKLRDMRRYGWCGIWGENKQ*VISELL
Trigger: CAGCAATTCACTGATGACCAACTGCTTGTTCTCACC...CCAAATACCACACCAACCATATCGCCTCATGTCCCTGAGTTTACTGCTCGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCACACTTCCGGACAAGTaGGGAAATCAAATGGCAACT +
Preference number: 5 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCTLPDK*GNQMAT
Trigger: AGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGT...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp TGGCTAAGCCCTGAAGAAACAATCGCTGGCCACGTCTGTACAATACAGTCCCAACATCTGTACAATGTCTaGCCAATGCTATCTCTACAG +
Preference number: 5 (lower is better)
Translates to: WLSPEETIAGHVCTIQSQHLYNV*PMLSLQ
Trigger: CTGTAGAGATAGCATTGGCAAGACATTGTACAGATG...TTGGGACTGTATTGTACAGACGTGGCCAGCGATTGTTTCTTCAGGGCTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS GCA 90 bp AGTACAGGGGGTATTACCAATTCAGGTCTCATGAGTGCAAGATTCTaGAAAGCCTGGGCTGCTTCTAGACTACCGGTTTTGCTAAACATA +
Preference number: 5 (lower is better)
Translates to: STGGITNSGLMSARF*KAWAASRLPVLLNI
Trigger: TATGTTTAGCAAAACCGGTAGTCTAGAAGCAGCCCAGGCTTTGCAGAATCTTGCACTCATGAGACCTGAATTGGTAATACCCCCTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp TTTGGAGAATCTTTACAAGCTGCTCCCTATAAAGAAGCAACTTCCTTCCATCCATTTGCACTAGCTTACTaGGTCCACCCATCATGGCGG +
Preference number: 5 (lower is better)
Translates to: FGESLQAAPYKEATSFHPFALAY*VHPSWR
Trigger: CCGCCATGATGGGTGGACCAAGTAAGCTAGTGCAAA...TGGATGGAAGGAAGTTGCTTCTTTATAGGGAGCAGCTTGTAAAGATTCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCGAGCCAATTAAACAGTaGTGCACTATAGTCAGACTC +
Preference number: 5 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFEPIKQ*CTIVRL
Trigger: GAGTCTGACTATAGTGCACAACTGTTTAATTGGCTC...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ATGGTGATTCCAACAGCAGTTCAAAAAGCCAGTGAAGTTTCCGGGGATCTCTGCGTTTCTACGGTAATATaGGACAGTGCTGTTCTAAGC +
Preference number: 5 (lower is better)
Translates to: MVIPTAVQKASEVSGDLCVSTVI*DSAVLS
Trigger: GCTTAGAACAGCACTGTCCAATATTACCGTAGAAAC...GCAGAGATCCCCGGAAACTTCACTGGCTTTTTGAACTGCTGTTGGAATCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAAAGGCACTCTCCATTCTaGCTGGGCAAGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQRHSPF*LGKATL
Trigger: CAAGGTGGCCTTGCCCAGCAAGAATGGAGAGTGCCT...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTTCCACTGGGGCAATCTaGAAAAACAAAGGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLSTGAI*KNKGRS
Trigger: GCTTCTACCTTTGTTTTTCAAGATTGCCCCAGTGGA...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTAAGTACCAAAGGCACTaGATGAGGGTAAAGCAACCC +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFKYQRH*MRVKQP
Trigger: GGGTTGCTTTACCCTCATCAAGTGCCTTTGGTACTT...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp GCTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTAAAGTCTGTAACATCTaGATCAGTAAGCTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: ALFSTKNSSLWEVHRHRLKVCNI*ISKLVA
Trigger: AGCCACAAGCTTACTGATCAAGATGTTACAGACTTT...AAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTGGTTTGCCCCAGTCCTaGATAGGAAAGTATTCAGAA +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFGLPQS*IGKYSE
Trigger: TTCTGAATACTTTCCTATCAAGGACTGGGGCAAACC...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCACAAGTCCCCGGGTTaGCCCCAGTCCTTGATAGGA +
Preference number: 5 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLHKSPG*PQSLIG
Trigger: TCCTATCAAGGACTGGGGCAAACCCGGGGACTTGTG...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp CTCTATTCAGCACCAAAAACTCCAGTCTGTGGGAAGTGCACAGACACAGACTTCGATTTCTTTACTAAGTaGAAGCTTTTCCATCGGGAG +
Preference number: 5 (lower is better)
Translates to: LYSAPKTPVCGKCTDTDFDFFTK*KLFHRE
Trigger: CTCCCGATGGAAAAGCTTCAACTTAGTAAAGAAATC...GAAGTCTGTGTCTGTGCACTTCCCACAGACTGGAGTTTTTGGTGCTGAATAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ATAGGAAAGTATTCAGAAGGAGGCTTGTCAAAGCCACCTGGCACACTGCAGTATGGCATTCTTTTCCTGTaGGCGTTTAATTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: IGKYSEGGLSKPPGTLQYGILFL*AFNSFL
Trigger: AAGGAAGGAATTAAACGCCAACAGGAAAAGAATGCC...ATACTGCAGTGTGCCAGGTGGCTTTGACAAGCCTCCTTCTGAATACTTTCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTAAACAACCATATTCTTaGGCCAGGTGTAGTATCCCC +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFKQPYS*ARCSIP
Trigger: GGGGATACTACACCTGGCCAAAGAATATGGTTGTTT...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTTCCACTGGGGCAATCTaGAAAAACAAAGGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFSTGAI*KNKGRS
Trigger: GCTTCTACCTTTGTTTTTCAAGATTGCCCCAGTGGA...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGTTCTCGAACCTCCAGTaGTTCGTCCTCCAAAAGACT +
Preference number: 5 (lower is better)
Translates to: ISILETLPDKLGNQMATEFSNLQ*FVLQKT
Trigger: AGTCTTTTGGAGGACGAACAACTGGAGGTTCGAGAA...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACTTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTCATCTGTACAATGTCTaGCCAATGCTATCTCTACAG +
Preference number: 5 (lower is better)
Translates to: TSVSWSSNPSGHWLGSGLHLYNV*PMLSLQ
Trigger: CTGTAGAGATAGCATTGGCAAGACATTGTACAGATG...AAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAATTTGCACTAGCTTACTaGGTCCACCCATCATGGCGG +
Preference number: 5 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQFALAY*VHPSWR
Trigger: CCGCCATGATGGGTGGACCAAGTAAGCTAGTGCAAA...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACAAACCAAGAGGGCTTCTaGTATCTTTCACGATGCAAT +
Preference number: 5 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTNQEGF*YLSRCN
Trigger: ATTGCATCGTGAAAGATACAAGAAGCCCTCTTGGTT...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGTGCGACCTGCTACTCTaGTTTCAAATATATGTGAAG +
Preference number: 5 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKCDLLL*FQIYVK
Trigger: CTTCACATATATTTGAAACAAGAGTAGCAGGTCGCA...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp GAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACACTGAGCCAATTAAACAGTaGTGCACTATAGTCAGACTC +
Preference number: 5 (lower is better)
Translates to: EISLALLYTGITPVYADTEPIKQ*CTIVRL
Trigger: GAGTCTGACTATAGTGCACAACTGTTTAATTGGCTC...AGTGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGGATTTCTTTACTAAGTaGAAGCTTTTCCATCGGGAG +
Preference number: 5 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKDFFTK*KLFHRE
Trigger: CTCCCGATGGAAAAGCTTCAACTTAGTAAAGAAATC...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp TTCTGTGTCTTGGTCGAGCAATCCATCAGGTCATTGGTTAGGTTCAGGACTTGCTTAATGGTCAGCTTTTaGTGGGTTCTTTTTAGCTGT +
Preference number: 5 (lower is better)
Translates to: FCVLVEQSIRSLVRFRTCLMVSF*WVLFSC
Trigger: ACAGCTAAAAAGAACCCACAAAAAGCTGACCATTAA...GCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACCAAGACACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATCATGAGGCGATATGGTaGGTGTGGTATTTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: FLMSSETLVLDAMIILGNHEAIW*VWYLAK
Trigger: CTTTGCCAAATACCACACCAACCATATCGCCTCATG...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp TTTGGAGAATCTTTACAAGCTGCTCCCTATAAAGAAGCAACTTCCTTCCATCCATTCTCGAACCTCCAGTaGTTCGTCCTCCAAAAGACT +
Preference number: 5 (lower is better)
Translates to: FGESLQAAPYKEATSFHPFSNLQ*FVLQKT
Trigger: AGTCTTTTGGAGGACGAACAACTGGAGGTTCGAGAA...TGGATGGAAGGAAGTTGCTTCTTTATAGGGAGCAGCTTGTAAAGATTCTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp TTTGGAGAATCTTTACAAGCTGCTCCCTATAAAGAAGCAACTTCCTTCCATCCATCTGAGACTCTGGTCTaGGATGCCATGATCATACTG +
Preference number: 5 (lower is better)
Translates to: FGESLQAAPYKEATSFHPSETLV*DAMIIL
Trigger: CAGTATGATCATGGCATCCAAGACCAGAGTCTCAGA...TGGATGGAAGGAAGTTGCTTCTTTATAGGGAGCAGCTTGTAAAGATTCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp TCAAATTTCCAGGGCAGGTTTCTTTGCTCCACACCATCTAGCAAGGTGTCTACCATGTTGTGTAAAAGGTaGCATCTGTACAATGTCTTG +
Preference number: 5 (lower is better)
Translates to: SNFQGRFLCSTPSSKVSTMLCKR*HLYNVL
Trigger: CAAGACATTGTACAGATGCAACCTTTTACACAACAT...GGTAGACACCTTGCTAGATGGTGTGGAGCAAAGAAACCTGCCCTGGAAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp CTGAAATCAGTTTGGCACTACTTTATACAGGGATTACGCCTGTGTATGCCGACATTTCTGTCTCTTCTCTaGTTTGCTCCAATGTGCTAC +
Preference number: 5 (lower is better)
Translates to: LKSVWHYFIQGLRLCMPTFLSLL*FAPMCY
Trigger: GTAGCACATTGGAGCAAACAAGAGAAGAGACAGAAA...TGTCGGCATACACAGGCGTAATCCCTGTATAAAGTAGTGCCAAACTGATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGACTGTACAGGGTGTGTaGCAAGATGACATTCACCAA +
Preference number: 5 (lower is better)
Translates to: ISILETLPDKLGNQMATETVQGV*QDDIHQ
Trigger: TTGGTGAATGTCATCTTGCAACACACCCTGTACAGT...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS TCA 90 bp CTGCGGGCTACTCCAATTACACAACTTAAAGTAGCTGTGAGCTGGTaGGGTTCTGTTAATGTCTCTAATGCAGGATATGTTCTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: LRATPITQLKVAVSW*GSVNVSNAGYVLSS
Trigger: ACTTGAAAGAACATATCCTGCATTAGAGACATTAACAGAACCTCACCAGCTCACAGCTACTTTAAGTTGTGTAATTGGAGTAGCCCGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp GGGGATCTCTGCTTTCACAGGATGTTGCTATACAAGCTCCCCAGTCATTATAAGCATTTGTTAAAAATCTaGGGACTAACACTTGACTGC +
Preference number: 5 (lower is better)
Translates to: GDLCFHRMLLYKLPSHYKHLLKI*GLTLDC
Trigger: GCAGTCAAGTGTTAGTCCCAAGATTTTTAACAAATG...CTTATAATGACTGGGGAGCTTGTATAGCAACATCCTGTGAAAGCAGAGATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTTGCGACCTGCTACTCTaGTTTCAAATATATGTGAAG +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFCDLLL*FQIYVK
Trigger: CTTCACATATATTTGAAACAAGAGTAGCAGGTCGCA...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGGGCATTCTTTTCCTGTaGGCGTTTAATTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: ISILETLPDKLGNQMATEGILFL*AFNSFL
Trigger: AAGGAAGGAATTAAACGCCAACAGGAAAAGAATGCC...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTTGGTTGGTGTGGTATTaGGCAAAGATACATCTATCA +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFWLVWY*AKIHLS
Trigger: TGATAGATGTATCTTTGCCAAATACCACACCAACCA...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp TCAAGTCCAGTATACAACTTTGTCTCTTCCAAGGACACCATACTTGGTACTAAGGCCAAGAACTGCTTCTaGCTGTTTGTTTTAGCACCT +
Preference number: 5 (lower is better)
Translates to: SSPVYNFVSSKDTILGTKAKNCF*LFVLAP
Trigger: AGGTGCTAAAACAAACAGCAAGAAGCAGTTCTTGGC...CTTAGTACCAAGTATGGTGTCCTTGGAAGAGACAAAGTTGTATACTGGACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS GCA 90 bp CGAGCAAAGAGATTTACTAGTTGCCCCTCCCATTGTGGGAGATTTTaGACTGAAACCCAAAGGCCAATTAATTCATCAAACCAAAGTTTA +
Preference number: 5 (lower is better)
Translates to: RAKRFTSCPSHCGRF*TETQRPINSSNQSL
Trigger: TAAACTTTGGTTTGATGAATTAATTGGCCTTTGGGTTTCAGTGCAAAATCTCCCACAATGGGAGGGGCAACTAGTAAATCTCTTTGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS-3UTR CAA 90 bp ATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGTGCATGCCAAGACCTAGGTGCTCTGTCTaGGAATATAATATTCTTTCT +
Preference number: 5 (lower is better)
Translates to: IKYHGLEVGQYCVSCMPRPRCSV*EYNILS
Trigger: AGAAAGAATATTATATTCCAAGACAGAGCACCTAGG...TCTTGGCATGCACGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ATCAGTATTCTGGAAACACTTCCGGACAAGTTGGGAAATCAAATGGCAACTGAGATAAGTGATGGCCTTTaGCATGGTTACATCAAAAGG +
Preference number: 5 (lower is better)
Translates to: ISILETLPDKLGNQMATEISDGL*HGYIKR
Trigger: CCTTTTGATGTAACCATGCAAAAGGCCATCACTTAT...CTCAGTTGCCATTTGATTTCCCAACTTGTCCGGAAGTGTTTCCAGAATACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp AATAAAGAGGTTATAAAATACCATGGTCTGGAGGTAGGTCAGTACTGTGTATCGGCCAGCGCCCATTATTaGAAGGATGGTAAAAAGATG +
Preference number: 5 (lower is better)
Translates to: NKEVIKYHGLEVGQYCVSASAHY*KDGKKM
Trigger: CATCTTTTTACCATCCTTCAAATAATGGGCGCTGGC...CGATACACAGTACTGACCTACCTCCAGACCATGGTATTTTATAACCTCTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389993.7
CDS-3UTR CAA 90 bp ACGAGATCTAACACAGAAACCACCAAAATGATGAGAGCTCAGCAGAGGCAGTTTTTAATGGTCAGCTTTTaGTGGGTTCTTTTTAGCTGT +
Preference number: 5 (lower is better)
Translates to: TRSNTETTKMMRAQQRQFLMVSF*WVLFSC
Trigger: ACAGCTAAAAAGAACCCACAAAAAGCTGACCATTAA...AAACTGCCTCTGCTGAGCTCTCATCATTTTGGTGGTTTCTGTGTTAGATCTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAAATCACCAGCAATAATTaGGGTGGGTTTAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQITSNN*GGFRAS
Trigger: GGATGCCCTAAACCCACCCAAATTATTGCTGGTGAT...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAAGGTGAGAACAAGCAGTaGGTCATCAGTGAATTGCTG +
Preference number: 5 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQGENKQ*VISELL
Trigger: CAGCAATTCACTGATGACCAACTGCTTGTTCTCACC...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATAAAGTCTGTAACATCTaGATCAGTAAGCTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FLMSSETLVLDAMIILGNKVCNI*ISKLVA
Trigger: AGCCACAAGCTTACTGATCAAGATGTTACAGACTTT...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATCAGTACAAGGCACCCTaGAATTGTTGCTGTGTAACA +
Preference number: 5 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNQYKAP*NCCCVT
Trigger: TGTTACACAGCAACAATTCAAGGGTGCCTTGTACTG...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGAGGATCTTCCTGCACTaGCCATCAGCCATTTCAATA +
Preference number: 5 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTRIFLH*PSAISI
Trigger: TATTGAAATGGCTGATGGCAAGTGCAGGAAGATCCT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGGCCAAGAACTGCTTCTaGCTGTTTGTTTTAGCACCT +
Preference number: 5 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTAKNCF*LFVLAP
Trigger: AGGTGCTAAAACAAACAGCAAGAAGCAGTTCTTGGC...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGTCTGAGACTCTGGTCTaGGATGCCATGATCATACTG +
Preference number: 5 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLSETLV*DAMIIL
Trigger: CAGTATGATCATGGCATCCAAGACCAGAGTCTCAGA...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAATCCATCAGGTCATaGGTTAGGTTCAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLQSIRS*VRFRTC
Trigger: GCAAGTCCTGAACCTAACCAATGACCTGATGGATTG...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp TTCTTAATGAGTTCTGAGACTCTGGTCTTGGATGCCATGATCATACTGGGTAATCATGTGGTGTTAGCATaGAGAGATGCACACAAAAAT +
Preference number: 5 (lower is better)
Translates to: FLMSSETLVLDAMIILGNHVVLA*RDAHKN
Trigger: ATTTTTGTGTGCATCTCTCAATGCTAACACCACATG...ATTACCCAGTATGATCATGGCATCCAAGACCAGAGTCTCAGAACTCATTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp ATACTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGGCCAGCGCCCATTATTaGAAGGATGGTAAAAAGATG +
Preference number: 5 (lower is better)
Translates to: ILKIYCSVPLRKTVQGVLASAHY*KDGKKM
Trigger: CATCTTTTTACCATCCTTCAAATAATGGGCGCTGGC...CAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGAACCAAGAGGGCTTCTaGTATCTTTCACGATGCAAT +
Preference number: 5 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTNQEGF*YLSRCN
Trigger: ATTGCATCGTGAAAGATACAAGAAGCCCTCTTGGTT...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGCAAACAATCTCACTATaGATGGCTTTTCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTQTISL*MAFPGT
Trigger: TGTCCCTGGAAAAGCCATCAATAGTGAGATTGTTTG...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAACAAACAATCTCACTATaGATGGCTTTTCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQQTISL*MAFPGT
Trigger: TGTCCCTGGAAAAGCCATCAATAGTGAGATTGTTTG...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAAGTTTCTACGGTAATATaGGACAGTGCTGTTCTAAGC +
Preference number: 5 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQVSTVI*DSAVLS
Trigger: GCTTAGAACAGCACTGTCCAATATTACCGTAGAAAC...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp AAACTTGTCATAGGCAAACATGTGGTGTTAGCATTGAGAGATGCACACAAAAATTGTCTCTTCTCTTGTTaGCTCCAATGTGCTACTTTC +
Preference number: 5 (lower is better)
Translates to: KLVIGKHVVLALRDAHKNCLFSC*LQCATF
Trigger: GAAAGTAGCACATTGGAGCAAACAAGAGAAGAGACA...ATTTTTGTGTGCATCTCTCAATGCTAACACCACATGTTTGCCTATGACAAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS-3UTR CAA 90 bp GTTGCATCTGTACAATGTCTTGCCAATGCTATCTCTACAGTTTATACACTCTTTATAAGTGATGGCCTTTaGCATGGTTACATCAAAAGG +
Preference number: 5 (lower is better)
Translates to: VASVQCLANAISTVYTLFISDGL*HGYIKR
Trigger: CCTTTTGATGTAACCATGCAAAAGGCCATCACTTAT...AAAGAGTGTATAAACTGTAGAGATAGCATTGGCAAGACATTGTACAGATGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp AAATGGCATTCAGTGGGTACAAAGCCCAAAATCACTATAATAAAGAACTACACGCATTTGTTAAAAATCTaGGGACTAACACTTGACTGC +
Preference number: 5 (lower is better)
Translates to: KWHSVGTKPKITIIKNYTHLLKI*GLTLDC
Trigger: GCAGTCAAGTGTTAGTCCCAAGATTTTTAACAAATG...CGTGTAGTTCTTTATTATAGTGATTTTGGGCTTTGTACCCACTGAATGCCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS-3UTR CAA 90 bp CTAAAAATATACTGTAGTGTTCCTTTAAGGAAGACTGTACAGGGTGTGTTGCAAATGTTGTGTAAAAGGTaGCATCTGTACAATGTCTTG +
Preference number: 5 (lower is better)
Translates to: LKIYCSVPLRKTVQGVLQMLCKR*HLYNVL
Trigger: CAAGACATTGTACAGATGCAACCTTTTACACAACAT...TTGCAACACACCCTGTACAGTCTTCCTTAAAGGAACACTACAGTATATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS GCA 72 bp TCTCCGGGCTCCGCCTCCTCCGCGTCTTCGTCGCCCTaGGGCCGCTGGCGGCCCGTCGCCCTCGGACCGATC +
Preference number: 6 (lower is better)
Translates to: SPGSASSASSSP*GRWRPVALGPI
Trigger: GATCGGTCCGAGGGCGACGGGCCGCCAGCGGCCGCAGGGCGACGAAGACGCGGAGGAGGCGGAGCCCGGAGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404125.6
CDS CAA 90 bp CCGGGCCACAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTTGCATTaGATCTGGGCCAGCTGCAAGTCGGACTCGGCGTCTAGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: PGHSSWSCTARPRLH*IWASCKSDSASSRS
Trigger: GGAGCGGCTAGACGCCGAGTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CAA 90 bp AGGCCCCCGGGCCACAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTaGCATTTGATCTGGGCCAGCTGCAAGTCGGACTCGGCGTCTAGC +
Preference number: 6 (lower is better)
Translates to: RPPGHSSWSCTARPR*HLIWASCKSDSASS
Trigger: GCTAGACGCCGAGTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS GCA 72 bp GTCCAGAAGAGGCCCCCGGGCCACAGCTCTTGGAGCTaGACGGCCCGGCCCAGGTTGCATTTGATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: VQKRPPGHSSWS*TARPRLHLIWA
Trigger: GGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CCA 72 bp TGGAGCTGCACGGCCCGGCCCAGGTTGCATTTGATCTaGGCCAGCTGCAAGTCGGACTCGGCGTCTAGCCGC +
Preference number: 6 (lower is better)
Translates to: WSCTARPRLHLI*ASCKSDSASSR
Trigger: GCGGCTAGACGCCGAGTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CCA 72 bp TTCCTGGTCCAGAAGAGGCCCCCGGGCCACAGCTCTTaGAGCTGCACGGCCCGGCCCAGGTTGCATTTGATC +
Preference number: 6 (lower is better)
Translates to: FLVQKRPPGHSS*SCTARPRLHLI
Trigger: GATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACCAGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CAA 72 bp GGCCACAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTaGCATTTGATCTGGGCCAGCTGCAAGTCGGACTCG +
Preference number: 6 (lower is better)
Translates to: GHSSWSCTARPR*HLIWASCKSDS
Trigger: CGAGTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CAA 90 bp TGTGGAGAGTTTCCTGGTCCAGAAGAGGCCCCCGGGCCACAGCTCTaGGAGCTGCACGGCCCGGCCCAGGTTGCATTTGATCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: CGEFPGPEEAPGPQL*ELHGPAQVAFDLGQ
Trigger: CTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACCAGGAAACTCTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS TCA 72 bp GCTCTTGGAGCTGCACGGCCCGGCCCAGGTTGCATTTaGTCTGGGCCAGCTGCAAGTCGGACTCGGCGTCTA +
Preference number: 6 (lower is better)
Translates to: ALGAARPGPGCI*SGPAASRTRRL
Trigger: TAGACGCCGAGTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CAA 72 bp AGCTCTTGGAGCTGCACGGCCCGGCCCAGGTTGCATTaGATCTGGGCCAGCTGCAAGTCGGACTCGGCGTCT +
Preference number: 6 (lower is better)
Translates to: SSWSCTARPRLH*IWASCKSDSAS
Trigger: AGACGCCGAGTCCGACTTGCAGCTGGCCCAGATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CAA 72 bp TTTCCTGGTCCAGAAGAGGCCCCCGGGCCACAGCTCTaGGAGCTGCACGGCCCGGCCCAGGTTGCATTTGAT +
Preference number: 6 (lower is better)
Translates to: FPGPEEAPGPQL*ELHGPAQVAFD
Trigger: ATCAAATGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACCAGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS TCA 72 bp CGTGTTAGCCAGGATGGTCTTGATCTTCTGACCTCGTaGTCCGCCCACGTCAGCCTCCTAAAGTGCTGCGAT +
Preference number: 6 (lower is better)
Translates to: RVSQDGLDLLTS*SAHVSLLKCCD
Trigger: ATCGCAGCACTTTAGGAGGCTGACGTGGGCGGATCACGAGGTCAGAAGATCAAGACCATCCTGGCTAACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488687.5
CDS CCA 72 bp TTCTCCCATAAAGTCGAATATATGTGGAGAGTTTCCTaGTCCAGAAGAGGCCCCCGGGCCACAGCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: FSHKVEYMWRVS*SRRGPRATALG
Trigger: TCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACCAGGAAACTCTCCACATATATTCGACTTTATGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CCA 72 bp GAAAGAACACATGCACCAAGTCCTAGCACCCCAGCATaGCGTTTGACCAACTCTCCAGTTGTTCGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: ERTHAPSPSTPA*RLTNSPVVRPP
Trigger: TGGAGGACGAACAACTGGAGAGTTGGTCAAACGCCATGCTGGGGTGCTAGGACTTGGTGCATGTGTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466539.1
CDS GCA 72 bp TTCTGGGCAGCACTTTACAGCAGCGCGGCACATGTCTaGCACCATGCGACCTGCTACTCTTGTTTCAAATAT +
Preference number: 6 (lower is better)
Translates to: FWAALYSSAAHV*HHATCYSCFKY
Trigger: ATATTTGAAACAAGAGTAGCAGGTCGCATGGTGGCAGACATGTGCCGCGCTGCTGTAAAGTGCTGCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS GCA 72 bp AGCACTTTACAGCAGCGCGGCACATGTCTGCCACCATaGGACCTGCTACTCTTGTTTCAAATATATGTGAAG +
Preference number: 6 (lower is better)
Translates to: STLQQRGTCLPP*DLLLLFQIYVK
Trigger: CTTCACATATATTTGAAACAAGAGTAGCAGGTCGCATGGTGGCAGACATGTGCCGCGCTGCTGTAAAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS TCA 72 bp CATATGTGTAGGACCTTCAGGAAACCATCTGCCTCCTaGTACCAAACTGCGGGCTACTCCAATTACACAACT +
Preference number: 6 (lower is better)
Translates to: HMCRTFRKPSAS*YQTAGYSNYTT
Trigger: AGTTGTGTAATTGGAGTAGCCCGCAGTTTGGTATCAGGAGGCAGATGGTTTCCTGAAGGTCCTACACATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS GCA 72 bp GGTATTACCAATTCAGGTCTCATGAGTGCAAGATTCTaGAAAGCCTGGGCTGCTTCTAGACTACCGGTTTTG +
Preference number: 6 (lower is better)
Translates to: GITNSGLMSARF*KAWAASRLPVL
Trigger: CAAAACCGGTAGTCTAGAAGCAGCCCAGGCTTTGCAGAATCTTGCACTCATGAGACCTGAATTGGTAATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS CCA 72 bp ACATTAAAGGTCGCCATTCTTCTAGCATCTCAGCGGTaGCATCTGCTGGAAAATATGGTCGGCAGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: TLKVAILLASQR*HLLENMVGSFS
Trigger: TGAAAAGCTGCCGACCATATTTTCCAGCAGATGCCACCGCTGAGATGCTAGAAGAATGGCGACCTTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CAA 90 bp GTAAGCTTGTGGCTATCAGGCACAGGAGTTAACCAAGAGGGCTTCTaGTATCTTTCACGATGCAATCTTCTAACAACACTGTTTGGCAAC +
Preference number: 6 (lower is better)
Translates to: VSLWLSGTGVNQEGF*YLSRCNLLTTLFGN
Trigger: GTTGCCAAACAGTGTTGTTAGAAGATTGCATCGTGAAAGATACAAGAAGCCCTCTTGGTTAACTCCTGTGCCTGATAGCCACAAGCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS CCA 72 bp AATTCAGGTCTCATGAGTGCAAGATTCTGCAAAGCCTaGGCTGCTTCTAGACTACCGGTTTTGCTAAACATA +
Preference number: 6 (lower is better)
Translates to: NSGLMSARFCKA*AASRLPVLLNI
Trigger: TATGTTTAGCAAAACCGGTAGTCTAGAAGCAGCCCAGGCTTTGCAGAATCTTGCACTCATGAGACCTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS CAA 72 bp TGGCTATCAGGCACAGGAGTTAACCAAGAGGGCTTCTaGTATCTTTCACGATGCAATCTTCTAACAACACTG +
Preference number: 6 (lower is better)
Translates to: WLSGTGVNQEGF*YLSRCNLLTTL
Trigger: CAGTGTTGTTAGAAGATTGCATCGTGAAAGATACAAGAAGCCCTCTTGGTTAACTCCTGTGCCTGATAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS GCA 72 bp CGTAGCTATTGTCATTTTCCACTGGGGCAATCACTGTaGTTTCTGCTTTACAGGTATGTCATTTCATCCTTC +
Preference number: 6 (lower is better)
Translates to: RSYCHFPLGQSL*FLLYRYVISSF
Trigger: GAAGGATGAAATGACATACCTGTAAAGCAGAAAGCACAGTGATTGCCCCAGTGGAAAATGACAATAGCTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466539.1
CDS GCA 72 bp AGATTTACTAGTTGCCCCTCCCATTGTGGGAGATTTTaGACTGAAACCCAAAGGCCAATTAATTCATCAAAC +
Preference number: 6 (lower is better)
Translates to: RFTSCPSHCGRF*TETQRPINSSN
Trigger: GTTTGATGAATTAATTGGCCTTTGGGTTTCAGTGCAAAATCTCCCACAATGGGAGGGGCAACTAGTAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS CCA 72 bp TCTTTTCAGTTCATCGTAGCTATTGTCATTTTCCACTaGGGCAATCACTGTGCTTTCTGCTTTACAGGTATG +
Preference number: 6 (lower is better)
Translates to: SFQFIVAIVIFH*GNHCAFCFTGM
Trigger: CATACCTGTAAAGCAGAAAGCACAGTGATTGCCCCAGTGGAAAATGACAATAGCTACGATGAACTGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466539.1
CDS CAA 90 bp TCCATATTACAGCATGTCCTATATCATAAGCATTTGTTAAAAATCTaGGGACTAACACTTGACTGCTTCCCACTGGGAGGTTCAAGCTTC +
Preference number: 6 (lower is better)
Translates to: SILQHVLYHKHLLKI*GLTLDCFPLGGSSF
Trigger: GAAGCTTGAACCTCCCAGTGGGAAGCAGTCAAGTGTTAGTCCCAAGATTTTTAACAAATGCTTATGATATAGGACATGCTGTAATATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS GCA 72 bp TTCTTTAACAAGTTGATCAAAAGGCGGGCAAATCCCTaGATCATGCTGATTTCCAGTTTTGGAATTGATACC +
Preference number: 6 (lower is better)
Translates to: FFNKLIKRRANP*IMLISSFGIDT
Trigger: GGTATCAATTCCAAAACTGGAAATCAGCATGATGCAGGGATTTGCCCGCCTTTTGATCAACTTGTTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389993.7
ENST00000404125.6
ENST00000481518.1
CDS TCA 72 bp ACTCCAATTACACAACTTAAAGTAGCTGTGAGCTGGTaGGGTTCTGTTAATGTCTCTAATGCAGGATATGTT +
Preference number: 6 (lower is better)
Translates to: TPITQLKVAVSW*GSVNVSNAGYV
Trigger: AACATATCCTGCATTAGAGACATTAACAGAACCTCACCAGCTCACAGCTACTTTAAGTTGTGTAATTGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389993.7
ENST00000404125.6
CDS TCA 72 bp TGTCAGATCACAAACACAGTTTACAAAAGTACTAAATaGAGCGTGTACACAGTCCATTTCAAATTGGAATGG +
Preference number: 6 (lower is better)
Translates to: CQITNTVYKSTK*SVYTVHFKLEW
Trigger: CCATTCCAATTTGAAATGGACTGTGTACACGCTTCATTTAGTACTTTTGTAAACTGTGTTTGTGATCTGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488687.5
CDS GCA 72 bp CTTACATCCTATGTGATTCTTATGAATTTCACAGGCTaGTGTCAGATCACAAACACAGTTTACAAAAGTACT +
Preference number: 6 (lower is better)
Translates to: LTSYVILMNFTG*CQITNTVYKST
Trigger: AGTACTTTTGTAAACTGTGTTTGTGATCTGACAGCAGCCTGTGAAATTCATAAGAATCACATAGGATGTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488687.5
CDS CCA 72 bp AGTAACAAAGACACAGACCAACCTAATTTCTGTAATTaGCATACATCATGGAGACTTACATCCTATGTGATT +
Preference number: 6 (lower is better)
Translates to: SNKDTDQPNFCN*HTSWRLTSYVI
Trigger: AATCACATAGGATGTAAGTCTCCATGATGTATGCCAATTACAGAAATTAGGTTGGTCTGTGTCTTTGTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488687.5