RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSMD9 (Homo sapiens)

Ensembl gene IDs: ENSG00000110801

Ensembl transcript IDs: ENST00000261817.6, ENST00000361485.5, ENST00000535293.5, ENST00000537407.5, ENST00000538613.5, ENST00000540962.5, ENST00000541212.6, ENST00000542602.1, ENST00000543699.5, ENST00000544254.1, ENST00000544724.5

Found 623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCACACAACCGTCCTGCCTGCCTCCTCACCGGGCACCGCGTGTTaGAGACAATTCCAGCTGGCTGGGGGCAGATATGACACAGGGTGC +
Preference number: 1 (lower is better)
Translates to: QHTTVLPASSPGTAC*RQFQLAGGRYDTGC
Trigger: GCACCCTGTGTCATATCTGCCCCCAGCCAGCTGGAATTGTCTGCAACACGCGGTGCCCGGTGAGGAGGCAGGCAGGACGGTTGTGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR CCA 90 bp TGCCTGCCTCCTCACCGGGCACCGCGTGTTGCAGACAATTCCAGCTaGCTGGGGGCAGATATGACACAGGGTGCACCAGCTTGCGGTTCT +
Preference number: 1 (lower is better)
Translates to: CLPPHRAPRVADNSS*LGADMTQGAPACGS
Trigger: AGAACCGCAAGCTGGTGCACCCTGTGTCATATCTGCCCCCAGCCAGCTGGAATTGTCTGCAACACGCGGTGCCCGGTGAGGAGGCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR CCA 90 bp AACATCTCATGGAAGACGGCAACAGGTGGCCACACGGGTTTCCACTaGGACCCCTGCAGGAAACCAGCCAGAGCCACTGAGGCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: NISWKTATGGHTGFH*DPCRKPARATEAEG
Trigger: GCCTTCTGCCTCAGTGGCTCTGGCTGGTTTCCTGCAGGGGTCCCAGTGGAAACCCGTGTGGCCACCTGTTGCCGTCTTCCATGAGATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR TCA 90 bp GGGCACCGCGTGTTGCAGACAATTCCAGCTGGCTGGGGGCAGATATaGCACAGGGTGCACCAGCTTGCGGTTCTCAGCACAAAGCGTTTC +
Preference number: 1 (lower is better)
Translates to: GHRVLQTIPAGWGQI*HRVHQLAVLSTKRF
Trigger: GAAACGCTTTGTGCTGAGAACCGCAAGCTGGTGCACCCTGTGTCATATCTGCCCCCAGCCAGCTGGAATTGTCTGCAACACGCGGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR GCA 90 bp ACTGAATTTCCAGGTCTCATGGATGCAGCACACAACCGTCCTGCCTaGCTCCTCACCGGGCACCGCGTGTTGCAGACAATTCCAGCTGGC +
Preference number: 1 (lower is better)
Translates to: TEFPGLMDAAHNRPA*LLTGHRVLQTIPAG
Trigger: GCCAGCTGGAATTGTCTGCAACACGCGGTGCCCGGTGAGGAGGCAGGCAGGACGGTTGTGTGCTGCATCCATGAGACCTGGAAATTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR TCA 90 bp GGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTTCACAGAGCCGAACTCCACAATCTC +
Preference number: 1 (lower is better)
Translates to: GLPLTVLHHTANVMQ*LEVLGVHRAELHNL
Trigger: GAGATTGTGGAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540962.5
3UTR GCA 90 bp TTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGGGTGTTCACAGAGCCGAACTCCACA +
Preference number: 1 (lower is better)
Translates to: FRGFPSLCCTTLPML*SDWKFWVFTEPNST
Trigger: TGTGGAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540962.5
3UTR GCA 90 bp TCACTGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTaGCAATGTTATGCAGTGACTGGAAGTTCTGGGTGTTCACAGAGC +
Preference number: 1 (lower is better)
Translates to: SLSHSGASPHCAAPH*QCYAVTGSSGCSQS
Trigger: GCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540962.5
3UTR GCA 90 bp TCTGTATCCAACCACAGCAAAACCAGTCCCAAGGAACACAGGGCTTaGCTGGCAGAACTGCCAAAACAGAAAGCGGTGTGCAAGAACTGG +
Preference number: 1 (lower is better)
Translates to: SVSNHSKTSPKEHRA*LAELPKQKAVCKNW
Trigger: CCAGTTCTTGCACACCGCTTTCTGTTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTTGGGACTGGTTTTGCTGTGGTTGGATACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR GCA 90 bp AGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAG +
Preference number: 1 (lower is better)
Translates to: REDAFLLLFPRDNHL*RGIMLQPSSPFPAQ
Trigger: CTGGGCAGGAAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCAAAGATGATTGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR CCA 90 bp ACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCC +
Preference number: 1 (lower is better)
Translates to: TSLFQILMLQGEKTS*KSLDPSPGQGKMLS
Trigger: GGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR CCA 90 bp CTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTaGTATCTGTATCCAACCACAGCAAAACCAGTCCCAAGGAACACA +
Preference number: 1 (lower is better)
Translates to: LWLEAHSNTNPIKAS*YLYPTTAKPVPRNT
Trigger: TGTGTTCCTTGGGACTGGTTTTGCTGTGGTTGGATACAGATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR CCA 90 bp TCGCCCAATAGGAAGGCTTTGGAATTGAGTGTGAGAACCTGTGGCTaGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATC +
Preference number: 1 (lower is better)
Translates to: SPNRKALELSVRTCG*KHTAIPIPSRQAGI
Trigger: GATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGTTCTCACACTCAATTCCAAAGCCTTCCTATTGGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR CCA 90 bp ACCAGCTTGCGGTTCTCAGCACAAAGCGTTTCCGCAAAACCGGTCTaGCTATATCTATTAGGATCATTCCACGTCAAAGTGGCTCTCCAC +
Preference number: 1 (lower is better)
Translates to: TSLRFSAQSVSAKPV*LYLLGSFHVKVALH
Trigger: GTGGAGAGCCACTTTGACGTGGAATGATCCTAATAGATATAGCCAGACCGGTTTTGCGGAAACGCTTTGTGCTGAGAACCGCAAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR GCA 90 bp AAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTT +
Preference number: 1 (lower is better)
Translates to: KNALIQGDYTGGPQY*HHTEVQVTSLFQIL
Trigger: AAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR TCA 90 bp GGCTACCAGAGGGGAATACGTATGGCTGTCAGGTCAAATAGAGTTTaGGGGAATTCGCCCAATAGGAAGGCTTTGGAATTGAGTGTGAGA +
Preference number: 1 (lower is better)
Translates to: GYQRGIRMAVRSNRV*GNSPNRKALELSVR
Trigger: TCTCACACTCAATTCCAAAGCCTTCCTATTGGGCGAATTCCCTCAAACTCTATTTGACCTGACAGCCATACGTATTCCCCTCTGGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR GCA 90 bp GCACAGTACTTAACCATTTCCGTATCCACAGCAGCAAGGCCTCAGTaGAAAGAAATATGTTGGTCAAAGCCTGACTTTGCAATTGCTAGC +
Preference number: 1 (lower is better)
Translates to: AQYLTISVSTAARPQ*KEICWSKPDFAIAS
Trigger: GCTAGCAATTGCAAAGTCAGGCTTTGACCAACATATTTCTTTGCACTGAGGCCTTGCTGCTGTGGATACGGAAATGGTTAAGTACTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR CAA 90 bp CAATTCCAGCTGGCTGGGGGCAGATATGACACAGGGTGCACCAGCTaGCGGTTCTCAGCACAAAGCGTTTCCGCAAAACCGGTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: QFQLAGGRYDTGCTS*RFSAQSVSAKPVWL
Trigger: TAGCCAGACCGGTTTTGCGGAAACGCTTTGTGCTGAGAACCGCAAGCTGGTGCACCCTGTGTCATATCTGCCCCCAGCCAGCTGGAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR-3UTR GCA 90 bp GGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACGGCTTCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 2 (lower is better)
Translates to: GRLHWWATVLPPHRSSGYGFPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCC...GTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp GGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGCCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 2 (lower is better)
Translates to: GGPQYCHHTEVQVTSLFQPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...CTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCGGCTTCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 2 (lower is better)
Translates to: ITLVGHSTATTQKFRLQAGFPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCC...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp GGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 2 (lower is better)
Translates to: GRLHWWATVLPPHRSSGYGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...GTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR CCA 90 bp CGTCAAAGTGGCTCTCCACTAACATCTCATGGAAGACGGCAACAGGTGGCCACACCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 2 (lower is better)
Translates to: RQSGSPLTSHGRRQQVATPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...TGTGGCCACCTGTTGCCGTCTTCCATGAGATGTTAGTGGAGAGCCACTTTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR-3UTR CCA 90 bp CCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGTCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: PRPKSRAREDAFLLLFPRSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...CCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCCCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 2 (lower is better)
Translates to: ITLVGHSTATTQKFRLQAPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR CCA 90 bp TGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCATCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: WWATVLPPHRSSGYKPLPSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...TGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR GCA 90 bp ACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCGGCTTCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 2 (lower is better)
Translates to: TATTQKFRLQASSRSLCFGFPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCC...GAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR CAA 90 bp ATCTGTATCCAACCACAGCAAAACCAGTCCCAAGGAACACAGGGCTaGCCTGGCAGAACTGCCAAAACAGAAAGCGGTGTGCAAGAACTG +
Preference number: 2 (lower is better)
Translates to: ICIQPQQNQSQGTQG*PGRTAKTESGVQEL
Trigger: CAGTTCTTGCACACCGCTTTCTGTTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTTGGGACTGGTTTTGCTGTGGTTGGATACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR TCA 90 bp TTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCCGTGGCCTAATTTGTaGAAGAGGCCAAGCCTAAGT +
Preference number: 2 (lower is better)
Translates to: LHWWATVLPPHRSSGYKPPWPNL*KRPSLS
Trigger: ACTTAGGCTTGGCCTCTTTCACAAATTAGGCCACGG...AGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp ACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATCAAGGAACACAGGGCTTaGCTGGCAGAACTGCCAAAA +
Preference number: 2 (lower is better)
Translates to: TCGWKHTAIPIPSRQAGIKEHRA*LAELPK
Trigger: TTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTT...GATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR GCA 90 bp ATAATCACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 2 (lower is better)
Translates to: IITPVPARITSAHLPTIQQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...CTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537407.5
3UTR-3UTR CCA 90 bp GTTACTGTTCCCCAGGGACAATCATCTTTGCAGAGGAATAATGTTGCAGCCCAGGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 2 (lower is better)
Translates to: VTVPQGQSSLQRNNVAAQGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...CTGGGCTGCAACATTATTCCTCTGCAAAGATGATTGTCCCTGGGGAACAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp CAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 2 (lower is better)
Translates to: QASSRSLCFRERRQVGNPGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...GGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR CCA 90 bp CTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCACCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 2 (lower is better)
Translates to: LPPHRSSGYKPLPDPYASPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...TGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR CCA 90 bp TGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGCCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 2 (lower is better)
Translates to: CHHTEVQVTSLFQILMLQPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...CTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp AGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: SLFQILMLQGEKTSWKSLGGPQY*HHTEVQ
Trigger: CTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC...TAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp GTTACTGTTCCCCAGGGACAATCATCTTTGCAGAGGAATAATGTTGCAGCCCAGCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 2 (lower is better)
Translates to: VTVPQGQSSLQRNNVAAQQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...CTGGGCTGCAACATTATTCCTCTGCAAAGATGATTGTCCCTGGGGAACAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp GCAAACATTGGTAAACACAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGATTAGCTATGCATGGTaGTGCACGCCTGTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: ANIGKHSMSVATRGEYVWISYAW*CTPVVP
Trigger: TGGGACCACAGGCGTGCACCACCATGCATAGCTAAT...CCATACGTATTCCCCTCTGGTAGCCACAGACATGCTGTGTTTACCAATGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR CAA 90 bp TACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTC +
Preference number: 2 (lower is better)
Translates to: YKPLPDPYASGREDK*EIPRPKSRAREDAF
Trigger: GAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR CAA 90 bp AAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAATCATCTTaGCAGAGGAATAATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: KGRCFPVTVPQGQSS*QRNNVAAQQSFSCP
Trigger: TGGGCAGGAAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCAAAGATGATTGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR TCA 90 bp CTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCCCGTGGCCTAATTTGTaGAAGAGGCCAAGCCTAAGT +
Preference number: 2 (lower is better)
Translates to: LPDPYASGREDKLEIPRPPWPNL*KRPSLS
Trigger: ACTTAGGCTTGGCCTCTTTCACAAATTAGGCCACGG...GGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR TCA 90 bp CAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCCGTGGCCTAATTTGTaGAAGAGGCCAAGCCTAAGT +
Preference number: 2 (lower is better)
Translates to: QYCHHTEVQVTSLFQILMPWPNL*KRPSLS
Trigger: ACTTAGGCTTGGCCTCTTTCACAAATTAGGCCACGG...CATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCTCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 2 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFSSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp GGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACTCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 2 (lower is better)
Translates to: GRLHWWATVLPPHRSSGYSSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...GTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp GAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCTGTGCTGCACCACACTaGCAATGTTATGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: EDKLEIPRPKSRAREDAFCAAPH*QCYAVT
Trigger: AGTCACTGCATAACATTGGCAGTGTGGTGCAGCACA...GAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR GCA 90 bp TGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGTTCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 2 (lower is better)
Translates to: CHHTEVQVTSLFQILMLQFPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA...CTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR GCA 90 bp AGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 2 (lower is better)
Translates to: STATTQKFRLQASSRSLCFPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA...GCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR GCA 90 bp GTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 2 (lower is better)
Translates to: VQVTSLFQILMLQGEKTSQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...ACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp CAGTACTTAACCATTTCCGTATCCACAGCAGCAAGGCCTCAGTGCAAAGAAATAGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 2 (lower is better)
Translates to: QYLTISVSTAARPQCKEIGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...TATTTCTTTGCACTGAGGCCTTGCTGCTGTGGATACGGAAATGGTTAAGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR CCA 90 bp AGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTATCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: SLFQILMLQGEKTSWKSLSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...TAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR TCA 90 bp CAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTT +
Preference number: 2 (lower is better)
Translates to: QASSRSLCFRERRQVGNPANVMQ*LEVLGV
Trigger: AACACCCAGAACTTCCAGTCACTGCATAACATTGGC...GGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540962.5
3UTR-3UTR CCA 90 bp GAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: EKTSWKSLDPSPGQGKMLGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...AAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
3UTR-3UTR CCA 90 bp AGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: SSPFPAQRVGTSLSWCFSGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...GGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp ACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATCCATAAGAAATTCAGCTaGGGTGACAACAGGGTCATA +
Preference number: 2 (lower is better)
Translates to: TCGWKHTAIPIPSRQAGIHKKFS*GDNRVI
Trigger: TATGACCCTGTTGTCACCCCAGCTGAATTTCTTATG...GATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR CCA 90 bp GTTTTTAAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCAGTGACTGGAAGTTCTaGGTGTTCACAGAGCCGAAC +
Preference number: 2 (lower is better)
Translates to: VFKNALIQGDYTGGPQYCSDWKF*VFTEPN
Trigger: GTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACT...GCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTTAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540962.5
3UTR-3UTR CCA 90 bp GTTACTGTTCCCCAGGGACAATCATCTTTGCAGAGGAATAATGTTGCAGCCCAGGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: VTVPQGQSSLQRNNVAAQGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...CTGGGCTGCAACATTATTCCTCTGCAAAGATGATTGTCCCTGGGGAACAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR TCA 90 bp GCAAACATTGGTAAACACAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGTGGGGAAATGAACACTaGTACCATGGAGAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: ANIGKHSMSVATRGEYVWWGNEH*YHGEEK
Trigger: TTTTTCCTCTCCATGGTATCAGTGTTCATTTCCCCA...CCATACGTATTCCCCTCTGGTAGCCACAGACATGCTGTGTTTACCAATGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR GCA 90 bp CTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCATCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 2 (lower is better)
Translates to: LPPHRSSGYKPLPDPYASSSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...TGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp CAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 2 (lower is better)
Translates to: QASSRSLCFRERRQVGNPSSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...GGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR GCA 90 bp GTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGG +
Preference number: 2 (lower is better)
Translates to: VQVTSLFQILMLQGEKTSTLPML*SDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGT...ACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR GCA 90 bp GAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 2 (lower is better)
Translates to: EIPRPKSRAREDAFLLLFRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...GAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp CACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: HRSSGYKPLPDPYASGREGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...TTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR CCA 90 bp AGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: SLFQILMLQGEKTSWKSLGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...TAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR CCA 90 bp TGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACA +
Preference number: 2 (lower is better)
Translates to: CHHTEVQVTSLFQILMLQMLCSD*KFWVFT
Trigger: TGTGAACACCCAGAACTTCCAGTCACTGCATAACAT...CTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540962.5
3UTR-3UTR GCA 90 bp CTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 2 (lower is better)
Translates to: LPDPYASGREDKLEIPRPRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...GGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CCA 90 bp CCAATCCCATCAAGGCAAGCTGGTATCTGTATCCAACCACAGCAAAACCAGTCCAATAATTCAAAGTATTaGCAGGAATCCCTGAGAACC +
Preference number: 2 (lower is better)
Translates to: PIPSRQAGICIQPQQNQSNNSKY*QESLRT
Trigger: GGTTCTCAGGGATTCCTGCCAATACTTTGAATTATT...GGACTGGTTTTGCTGTGGTTGGATACAGATACCAGCTTGCCTTGATGGGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR GCA 90 bp GTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAAAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 2 (lower is better)
Translates to: VTSLFQILMLQGEKTSWKRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...TTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR GCA 72 bp ACCGTCCTGCCTGCCTCCTCACCGGGCACCGCGTGTTaGAGACAATTCCAGCTGGCTGGGGGCAGATATGAC +
Preference number: 3 (lower is better)
Translates to: TVLPASSPGTAC*RQFQLAGGRYD
Trigger: GTCATATCTGCCCCCAGCCAGCTGGAATTGTCTGCAACACGCGGTGCCCGGTGAGGAGGCAGGCAGGACGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR CCA 72 bp TGGAAGACGGCAACAGGTGGCCACACGGGTTTCCACTaGGACCCCTGCAGGAAACCAGCCAGAGCCACTGAG +
Preference number: 3 (lower is better)
Translates to: WKTATGGHTGFH*DPCRKPARATE
Trigger: CTCAGTGGCTCTGGCTGGTTTCCTGCAGGGGTCCCAGTGGAAACCCGTGTGGCCACCTGTTGCCGTCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR GCA 72 bp CCAGGTCTCATGGATGCAGCACACAACCGTCCTGCCTaGCTCCTCACCGGGCACCGCGTGTTGCAGACAATT +
Preference number: 3 (lower is better)
Translates to: PGLMDAAHNRPA*LLTGHRVLQTI
Trigger: AATTGTCTGCAACACGCGGTGCCCGGTGAGGAGGCAGGCAGGACGGTTGTGTGCTGCATCCATGAGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR GCA 72 bp ATTTCCAGGTCTCATGGATGCAGCACACAACCGTCCTaGCTGCCTCCTCACCGGGCACCGCGTGTTGCAGAC +
Preference number: 3 (lower is better)
Translates to: ISRSHGCSTQPS*LPPHRAPRVAD
Trigger: GTCTGCAACACGCGGTGCCCGGTGAGGAGGCAGGCAGGACGGTTGTGTGCTGCATCCATGAGACCTGGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
3UTR GCA 72 bp CCAGTCCCAAGGAACACAGGGCTTGCCTGGCAGAACTaGCAAAACAGAAAGCGGTGTGCAAGAACTGGGGAA +
Preference number: 3 (lower is better)
Translates to: PVPRNTGLAWQN*QNRKRCARTGE
Trigger: TTCCCCAGTTCTTGCACACCGCTTTCTGTTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTTGGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR GCA 72 bp CATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTaGCAATGTTATGCAGTGACTGGAAGTTCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: HSGASPHCAAPH*QCYAVTGSSGC
Trigger: ACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR GCA 72 bp TTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGGGTGTTCACAGAGCCG +
Preference number: 3 (lower is better)
Translates to: FPSLCCTTLPML*SDWKFWVFTEP
Trigger: CGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540962.5
3UTR TCA 72 bp CTCACTGTGCTGCACCACACTGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTTCACAGAGCCGAACTC +
Preference number: 3 (lower is better)
Translates to: LTVLHHTANVMQ*LEVLGVHRAEL
Trigger: GAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540962.5
3UTR GCA 72 bp ATCACTGTCACATTCAGGGGCTTCCCCTCACTGTGCTaGACCACACTGCCAATGTTATGCAGTGACTGGAAG +
Preference number: 3 (lower is better)
Translates to: ITVTFRGFPSLC*TTLPMLCSDWK
Trigger: CTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
3UTR CCA 72 bp ACAGCAAAACCAGTCCCAAGGAACACAGGGCTTGCCTaGCAGAACTGCCAAAACAGAAAGCGGTGTGCAAGA +
Preference number: 3 (lower is better)
Translates to: TAKPVPRNTGLA*QNCQNRKRCAR
Trigger: TCTTGCACACCGCTTTCTGTTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTTGGGACTGGTTTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR CAA 90 bp GGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCATAACTTCCGCCCACTaGCCCACAATCCAGGGAATT +
Preference number: 3 (lower is better)
Translates to: GHSTATTQKFRLQASSRSITSAH*PTIQGI
Trigger: AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTAT...GGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
3UTR-3UTR CAA 90 bp GGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 3 (lower is better)
Translates to: GREDKLEIPRPKSRAREDGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...ATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
3UTR-3UTR CAA 90 bp AATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 3 (lower is better)
Translates to: NVAAQQSFSCPACWNKSKGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...CTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CAA 90 bp GCAAACATTGGTAAACACAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGCAAGGAACACAGGGCTaGCCTGGCAGAACTGCCAAA +
Preference number: 3 (lower is better)
Translates to: ANIGKHSMSVATRGEYVWQGTQG*PGRTAK
Trigger: TTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTTG...CCATACGTATTCCCCTCTGGTAGCCACAGACATGCTGTGTTTACCAATGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR CAA 90 bp GGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 3 (lower is better)
Translates to: GPQYCHHTEVQVTSLFQICRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...GATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CAA 90 bp CACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 3 (lower is better)
Translates to: HWWATVLPPHRSSGYKPLCRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...AAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CAA 90 bp TTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 3 (lower is better)
Translates to: LEIPRPKSRAREDAFLLLGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...CAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
3UTR GCA 72 bp TTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAGGTTACAAGCCTCTTC +
Preference number: 3 (lower is better)
Translates to: LIQGDYTGGPQY*HHTEVQVTSLF
Trigger: GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR GCA 72 bp CAGAGGAATAATGTTGCAGCCCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTT +
Preference number: 3 (lower is better)
Translates to: QRNNVAAQQSFS*PACWNKSKLVF
Trigger: AAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACATTATTCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR CCA 72 bp TTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAG +
Preference number: 3 (lower is better)
Translates to: FQILMLQGEKTS*KSLDPSPGQGK
Trigger: CTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
3UTR CCA 72 bp GAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTaGTATCTGTATCCAACCACAGCAAAACCAGTCCCA +
Preference number: 3 (lower is better)
Translates to: EAHSNTNPIKAS*YLYPTTAKPVP
Trigger: TGGGACTGGTTTTGCTGTGGTTGGATACAGATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR CCA 72 bp AGGAAGGCTTTGGAATTGAGTGTGAGAACCTGTGGCTaGAAGCACACAGCAATACCAATCCCATCAAGGCAA +
Preference number: 3 (lower is better)
Translates to: RKALELSVRTCG*KHTAIPIPSRQ
Trigger: TTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGTTCTCACACTCAATTCCAAAGCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR-3UTR CAA 90 bp AGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 3 (lower is better)
Translates to: SSGYKPLPDPYASGREDKCRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...CTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CAA 90 bp GCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGCAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 3 (lower is better)
Translates to: ATTQKFRLQASSRSLCFRQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...CCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR-3UTR CAA 90 bp CCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGCAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 3 (lower is better)
Translates to: PPHRSSGYKPLPDPYASGQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...CCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
3UTR TCA 72 bp AGGGGAATACGTATGGCTGTCAGGTCAAATAGAGTTTaGGGGAATTCGCCCAATAGGAAGGCTTTGGAATTG +
Preference number: 3 (lower is better)
Translates to: RGIRMAVRSNRV*GNSPNRKALEL
Trigger: CAATTCCAAAGCCTTCCTATTGGGCGAATTCCCTCAAACTCTATTTGACCTGACAGCCATACGTATTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR GCA 72 bp TGGTCAAAGCCTGACTTTGCAATTGCTAGCCTGTTTTaGCCAACTTTCTATGAAGCTCTTCTGACCCCATCT +
Preference number: 3 (lower is better)
Translates to: WSKPDFAIASLF*PTFYEALLTPS
Trigger: AGATGGGGTCAGAAGAGCTTCATAGAAAGTTGGGCAAAACAGGCTAGCAATTGCAAAGTCAGGCTTTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
3UTR GCA 72 bp TTAACCATTTCCGTATCCACAGCAGCAAGGCCTCAGTaGAAAGAAATATGTTGGTCAAAGCCTGACTTTGCA +
Preference number: 3 (lower is better)
Translates to: LTISVSTAARPQ*KEICWSKPDFA
Trigger: TGCAAAGTCAGGCTTTGACCAACATATTTCTTTGCACTGAGGCCTTGCTGCTGTGGATACGGAAATGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACGTCACGACGCCGGCCTaGGAGGAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDVTTPA*EEPPLC
Trigger: GCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGAC...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp GGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGGTCACGACGCCGGCCTaGGAGGAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GGPQYCHHTEVQVTSLFQVTTPA*EEPPLC
Trigger: GCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGAC...CTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCCCTCGTCGGACATCGTaGACCCCGGGCCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: GHSTATTQKFRLQASSRSPRRTS*TPGRDS
Trigger: GGAGTCGCGGCCCGGGGTTCACGATGTCCGACGAGG...GGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
CDS-3UTR TCA 90 bp GACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAGCTCCTGGACGTCGCTaGCAGTCACGACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: DPSPGQGKMLSCYCSPGTAPGRR*QSRRRP
Trigger: AGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGC...TGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR TCA 90 bp CCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGCTCCTGGACGTCGCTaGCAGTCACGACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PRPKSRAREDAFLLLFPRAPGRR*QSRRRP
Trigger: AGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGC...CCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp GGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCGTCACGACGCCGGCCTaGGAGGAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GHSTATTQKFRLQASSRSVTTPA*EEPPLC
Trigger: GCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGAC...GGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAATTCCGTCACGACGCCGGCCTaGGAGGAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSTCQNNFRPLAHNPGNSVTTPA*EEPPLC
Trigger: GCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGAC...GGAATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR CCA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACACCCGCGATGCTGGCTaGGGAGCCGGGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDTRDAG*GAGADA
Trigger: AGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGGT...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR TCA 90 bp AGAACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTCCTCGTCGGACATCGTaGACCCCGGGCCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: RTCGWKHTAIPIPSRQAGPRRTS*TPGRDS
Trigger: GGAGTCGCGGCCCGGGGTTCACGATGTCCGACGAGG...ACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp CAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCCCCCTCGTCGGACATCGTaGACCCCGGGCCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: QSFSCPACWNKSKLVFFPPRRTS*TPGRDS
Trigger: GGAGTCGCGGCCCGGGGTTCACGATGTCCGACGAGG...GGGGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000537407.5
ENST00000540962.5
CDS-3UTR GCA 90 bp CAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGCGAGCGTGCAGCTGGTaGAGGGCCTCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QGEKTSWKSLDPSPGQGKRACSW*RASSTC
Trigger: GCAGGTGGAGGAGGCCCTGCACCAGCTGCACGCTCG...CTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCCGAGCGTGCAGCTGGTaGAGGGCCTCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GHSTATTQKFRLQASSRSRACSW*RASSTC
Trigger: GCAGGTGGAGGAGGCCCTGCACCAGCTGCACGCTCG...GGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTCCTTGTCGCGAGCGTaGAGCTGGTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGRLHWWATVLPPHRSSGSLSRA*SWCRAS
Trigger: GGAGGCCCTGCACCAGCTGCACGCTCGCGACAAGGA...ACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCCTTGCAGACCCGCGATaGTGGCTGGGGAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ITLVGHSTATTQKFRLQALADPR*WLGSRG
Trigger: GCCCCGGCTCCCCAGCCAGCATCGCGGGTCTGCAAG...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp TGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCCTGGATTACCGCGATaGTGGCTGGGGAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CHIQGLPLTVLHHTANVMPGLPR*WLGSRG
Trigger: GCCCCGGCTCCCCAGCCAGCATCGCGGTAATCCAGG...CATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR TCA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTCCTCGTCGGACATCGTaGACCCCGGGCCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCPRRTS*TPGRDS
Trigger: GGAGTCGCGGCCCGGGGTTCACGATGTCCGACGAGG...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
CDS-3UTR TCA 90 bp AAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACGCTCCTGGACGTCGCTaGCAGTCACGACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: KNALIQGDYTGGPQYCHHAPGRR*QSRRRP
Trigger: AGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGC...GTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp CTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGGTACAGGTCCACGTCTaGCCGGGGGTAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: LDPSPGQGKMLSCYCSPGVQVHV*PGVALT
Trigger: TGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTAC...CCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACGGCAGGAGGACTGCTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDGRRTA*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGCAGTCCTCCTGCC...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCGAGGAGCCTCCGCTCTaGCTCGCTTCCTCGTCGGAC +
Preference number: 4 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFEEPPL*LASSSD
Trigger: GTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTC...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp TCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGAGGAGCCTCCGCTCTaGCTCGCTTCCTCGTCGGAC +
Preference number: 4 (lower is better)
Translates to: SLDPSPGQGKMLSCYCSPEEPPL*LASSSD
Trigger: GTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTC...TGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp TTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGGTCACGACGCCGGCCTaGGAGGAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LEIPRPKSRAREDAFLLLVTTPA*EEPPLC
Trigger: GCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGAC...CAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp TCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGCGGCTGAGGCAGTaGCCACAGCGTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLDPSPGQGKMLSCYCSPGRLRQ*PQRQGF
Trigger: GAAGCCTTGACGCTGTGGGCACTGCCTCAGCCGCCC...TGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp AGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACCTGGATTACCGCGATaGTGGCTGGGGAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: REITLVGHSTATTQKFRLPGLPR*WLGSRG
Trigger: GCCCCGGCTCCCCAGCCAGCATCGCGGTAATCCAGG...TAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CCA 90 bp AGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCAGTGACTGGCTGGCGGTGCGGACTTaGTACAGGTCCACGTCTGAC +
Preference number: 4 (lower is better)
Translates to: RGFPSLCCTTLPMLCSDWLAVRT*YRSTSD
Trigger: GTCAGACGTGGACCTGTACCAAGTCCGCACCGCCAG...CCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CCA 90 bp GACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACATTTGGCGAAGGCCCGTaGAGGGCCCTGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: DPSPGQGKMLSCYCSPGTFGEGP*RALALT
Trigger: AGTGAGAGCCAGGGCCCTCCACGGGCCTTCGCCAAA...TGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp CTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGGGTGGTGCACGCCTGTaGTCCCAGATACTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LDPSPGQGKMLSCYCSPGGGARL*SQILGR
Trigger: CCGCCCAAGTATCTGGGACCACAGGCGTGCACCACC...CCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACGGTGGTGCACGCCTGTaGTCCCAGATACTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDGGARL*SQILGR
Trigger: CCGCCCAAGTATCTGGGACCACAGGCGTGCACCACC...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCTACCGCGATGCTGGCTaGGGAGCCGGGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: GPQYCHHTEVQVTSLFQIYRDAG*GAGADA
Trigger: AGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGTA...GATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CCA 90 bp CCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTCTGACACCTGGCTGCTaGCCCTGGAAGCTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGRLHWWATVLPPHRSSGLTPGC*PWKLEG
Trigger: CCCCTCTAGCTTCCAGGGCCAGCAGCCAGGTGTCAG...ACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR TCA 90 bp CTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCCCTCGTCGGACATCGTaGACCCCGGGCCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: LPDPYASGREDKLEIPRPPRRTS*TPGRDS
Trigger: GGAGTCGCGGCCCGGGGTTCACGATGTCCGACGAGG...GGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
CDS-3UTR TCA 90 bp GGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACCTGGGGAGCCGGGGCTaGTGCTGTTCACTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GRLHWWATVLPPHRSSGYLGSRG*CCSLWR
Trigger: TCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAG...GTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCGAGCGTGCAGCTGGTaGAGGGCCTCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: KSLDPSPGQGKMLSCYCSRACSW*RASSTC
Trigger: GCAGGTGGAGGAGGCCCTGCACCAGCTGCACGCTCG...GGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACCGAGCGTGCAGCTGGTaGAGGGCCTCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SWKSLDPSPGQGKMLSCYRACSW*RASSTC
Trigger: GCAGGTGGAGGAGGCCCTGCACCAGCTGCACGCTCG...GTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATCTCCTTGTCGCGAGCGTaGAGCTGGTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TCGWKHTAIPIPSRQAGISLSRA*SWCRAS
Trigger: GGAGGCCCTGCACCAGCTGCACGCTCGCGACAAGGA...GATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp GGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATTCCTTGTCGCGAGCGTaGAGCTGGTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GREDKLEIPRPKSRAREDSLSRA*SWCRAS
Trigger: GGAGGCCCTGCACCAGCTGCACGCTCGCGACAAGGA...ATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp TCACTGTGCTGCACCACACTGCCAATGTTATGCAGTGACTGGAAGTTCTGGGTGGCCATGTCCCGGGCCTaGTTCTCCTTGTCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: SLCCTTLPMLCSDWKFWVAMSRA*FSLSRA
Trigger: CGCTCGCGACAAGGAGAAGCAGGCCCGGGACATGGC...CACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR GCA 90 bp TGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGCTTGCAGACCCGCGATaGTGGCTGGGGAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CHHTEVQVTSLFQILMLQLADPR*WLGSRG
Trigger: GCCCCGGCTCCCCAGCCAGCATCGCGGGTCTGCAAG...CTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp GCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGCACAACCGTCCTGCCTaGCTCCTCACCGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: ATTQKFRLQASSRSLCFRHNRPA*LLTGHR
Trigger: GCGGTGCCCGGTGAGGAGGCAGGCAGGACGGTTGTG...CCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR CCA 90 bp CAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGCTGTCAGGTCAAATAGATCGCGAGCGTGCAGCTaGTGCAGGGCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QHVCGYQRGIRMAVRSNRSRACS*CRASST
Trigger: GGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGCGA...TCTATTTGACCTGACAGCCATACGTATTCCCCTCTGGTAGCCACAGACATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp CCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGTCGCGAGCGTGCAGCTaGTGCAGGGCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PYASGREDKLEIPRPKSRSRACS*CRASST
Trigger: GGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGCGA...CCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTCGCGAGCGTGCAGCTaGTGCAGGGCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCSRACS*CRASST
Trigger: GGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGCGA...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACTTTGGCGAAGGCCCGTaGAGGGCCCTGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: GRLHWWATVLPPHRSSGYFGEGP*RALALT
Trigger: AGTGAGAGCCAGGGCCCTCCACGGGCCTTCGCCAAA...GTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp CCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTACCCGCGATGCTGGCTaGGGAGCCGGGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: PQYCHHTEVQVTSLFQILTRDAG*GAGADA
Trigger: AGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGGT...AAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR CCA 90 bp GCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGACCCGCGATGCTGGCTaGGGAGCCGGGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: ATTQKFRLQASSRSLCFRTRDAG*GAGADA
Trigger: AGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGGT...CCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR CCA 90 bp GATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCGACAGGACACCACGCTaGGCCACCTGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DYTGGPQYCHHTEVQVTSDRTPR*ATWEAS
Trigger: GGAGGCTTCCCAGGTGGCCCAGCGTGGTGTCCTGTC...GCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp CACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGGCTCCTGGACGTCGCTaGCAGTCACGACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: HTEVQVTSLFQILMLQGEAPGRR*QSRRRP
Trigger: AGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGC...CTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCGTACAGGTCCACGTCTaGCCGGGGGTAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: DYTGGPQYCHHTEVQVTSVQVHV*PGVALT
Trigger: TGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTAC...GCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp ATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCCCCTGGCTCTCACTCTaGCCCAGTTTGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: MLQPSSPFPAQRVGTSLSPWLSL*PSLRLM
Trigger: CATGAGCCGCAAACTGGGTCAGAGTGAGAGCCAGGG...GCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000543699.5
CDS-3UTR TCA 90 bp GGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCCCTGGCTCTCACTCTaGCCCAGTTTGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: GPQYCHHTEVQVTSLFQIPWLSL*PSLRLM
Trigger: CATGAGCCGCAAACTGGGTCAGAGTGAGAGCCAGGG...GATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp ATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCCCCTGGGCATGGACTTaGGTGGCCAACCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: MLQPSSPFPAQRVGTSLSPWAWT*VANPWI
Trigger: AATCCAGGGGTTGGCCACTCAAGTCCATGCCCAGGG...GCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR GCA 90 bp CCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGGAGGAGCCTCCGCTCTaGCTCGCTTCCTCGTCGGAC +
Preference number: 4 (lower is better)
Translates to: PPHRSSGYKPLPDPYASGEEPPL*LASSSD
Trigger: GTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTC...CCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTGAGGAGCCTCCGCTCTaGCTCGCTTCCTCGTCGGAC +
Preference number: 4 (lower is better)
Translates to: EKTSWKSLDPSPGQGKMLEEPPL*LASSSD
Trigger: GTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTC...AAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp ACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAGTCACGACGCCGGCCTaGGAGGAGCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TQKFRLQASSRSLCFRERVTTPA*EEPPLC
Trigger: GCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGAC...TCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCTCCTTGTCGCGAGCGTaGAGCTGGTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EIPRPKSRAREDAFLLLFSLSRA*SWCRAS
Trigger: GGAGGCCCTGCACCAGCTGCACGCTCGCGACAAGGA...GAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTGCCATGTCCCGGGCCTaGTTCTCCTTGTCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: PQYCHHTEVQVTSLFQILAMSRA*FSLSRA
Trigger: CGCTCGCGACAAGGAGAAGCAGGCCCGGGACATGGC...AAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGCTTGCAGACCCGCGATaGTGGCTGGGGAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SSGYKPLPDPYASGREDKLADPR*WLGSRG
Trigger: GCCCCGGCTCCCCAGCCAGCATCGCGGGTCTGCAAG...CTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp CTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAGGGGCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: LQGEKTSWKSLDPSPGQGRGPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGCCCCT...CCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS-3UTR GCA 90 bp AAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCGGGCGGCTGAGGCAGTaGCCACAGCGTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KSLDPSPGQGKMLSCYCSGRLRQ*PQRQGF
Trigger: GAAGCCTTGACGCTGTGGGCACTGCCTCAGCCGCCC...GGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp ACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAACCGGGCACCGCGTGTTaGAGACAATTCCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TQVQGKGRCFPVTVPQGQPGTAC*RQFQLA
Trigger: AGCCAGCTGGAATTGTCTGCAACACGCGGTGCCCGG...TTGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR CCA 90 bp TCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAACGCCGCATCAGCTCCTaGACGTCGCTGACAGTCACG +
Preference number: 4 (lower is better)
Translates to: SGREDKLEIPRPKSRARERRISS*TSLTVT
Trigger: CGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCG...TTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCTCGCGAGCGTGCAGCTaGTGCAGGGCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: DPYASGREDKLEIPRPKSSRACS*CRASST
Trigger: GGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGCGA...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp ATCACTGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGGGGCATGGACTTGAGTaGCCAACCCCTGGATTACCG +
Preference number: 4 (lower is better)
Translates to: ITVTFRGFPSLCCTTLPMGHGLE*PTPGLP
Trigger: CGGTAATCCAGGGGTTGGCCACTCAAGTCCATGCCC...CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CCA 90 bp CCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTGAAGACGGCAACAGGTaGCCACACGGGTTTCCACTG +
Preference number: 4 (lower is better)
Translates to: PGRLHWWATVLPPHRSSGEDGNR*PHGFPL
Trigger: CAGTGGAAACCCGTGTGGCCACCTGTTGCCGTCTTC...ACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR TCA 90 bp TCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGCTCCTGGACGTCGCTaGCAGTCACGACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SGYKPLPDPYASGREDKLAPGRR*QSRRRP
Trigger: AGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGC...CAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAGCTCCTGGACGTCGCTaGCAGTCACGACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GYKPLPDPYASGREDKLEAPGRR*QSRRRP
Trigger: AGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGC...TTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTGTACAGGTCCACGTCTaGCCGGGGGTAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: REDKLEIPRPKSRAREDAVQVHV*PGVALT
Trigger: TGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTAC...AGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACCCTGGCTCTCACTCTaGCCCAGTTTGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: REITLVGHSTATTQKFRLPWLSL*PSLRLM
Trigger: CATGAGCCGCAAACTGGGTCAGAGTGAGAGCCAGGG...TAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCTGGGGAGCCGGGGCTaGTGCTGTTCACTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: EIPRPKSRAREDAFLLLFLGSRG*CCSLWR
Trigger: TCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAG...GAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp TATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCACTGGGGAGCCGGGGCTaGTGCTGTTCACTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: YASGREDKLEIPRPKSRALGSRG*CCSLWR
Trigger: TCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAG...TGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCAACTGGGTGGCTAGGTaGCAGGGCAGGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: ITLVGHSTATTQKFRLQANWVAR*QGRERD
Trigger: GTCTCTCTCCCTGCCCTGTCACCTAGCCACCCAGTT...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp ACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCGAGGAGCCTCCGCTCTaGCTCGCTTCCTCGTCGGAC +
Preference number: 4 (lower is better)
Translates to: TATTQKFRLQASSRSLCFEEPPL*LASSSD
Trigger: GTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTC...GAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACCGAGCGTGCAGCTGGTaGAGGGCCTCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: RSSGYKPLPDPYASGREDRACSW*RASSTC
Trigger: GCAGGTGGAGGAGGCCCTGCACCAGCTGCACGCTCG...GTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCTCCTTGTCGCGAGCGTaGAGCTGGTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DPYASGREDKLEIPRPKSSLSRA*SWCRAS
Trigger: GGAGGCCCTGCACCAGCTGCACGCTCGCGACAAGGA...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCGCCATGTCCCGGGCCTaGTTCTCCTTGTCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: STATTQKFRLQASSRSLCAMSRA*FSLSRA
Trigger: CGCTCGCGACAAGGAGAAGCAGGCCCGGGACATGGC...GCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp TGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGCCATGTCCCGGGCCTaGTTCTCCTTGTCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: CHHTEVQVTSLFQILMLQAMSRA*FSLSRA
Trigger: CGCTCGCGACAAGGAGAAGCAGGCCCGGGACATGGC...CTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDGGPQY*HHTEVQ
Trigger: CTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTAGGGCCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: LNPGRLHWWATVLPPHRSRAPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGGCCCT...ACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS-3UTR GCA 90 bp CTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGGGCTTCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: LQGEKTSWKSLDPSPGQGGFPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCC...CCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp CAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGGGCTTCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: QGEKTSWKSLDPSPGQGKGFPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCC...CTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp TTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGCGCCGCATCAGCTCCTaGACGTCGCTGACAGTCACG +
Preference number: 4 (lower is better)
Translates to: LEIPRPKSRAREDAFLLLRRISS*TSLTVT
Trigger: CGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCG...CAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp AGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCCCCCTGGCGGTGCGGACTTaGTACAGGTCCACGTCTGAC +
Preference number: 4 (lower is better)
Translates to: SPFPAQRVGTSLSWCFSPLAVRT*YRSTSD
Trigger: GTCAGACGTGGACCTGTACCAAGTCCGCACCGCCAG...GGGGGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CCA 90 bp CTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTCTGGCGGTGCGGACTTaGTACAGGTCCACGTCTGAC +
Preference number: 4 (lower is better)
Translates to: LNPGRLHWWATVLPPHRSLAVRT*YRSTSD
Trigger: GTCAGACGTGGACCTGTACCAAGTCCGCACCGCCAG...ACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp CACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAATCGCGAGCGTGCAGCTaGTGCAGGGCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HRSSGYKPLPDPYASGRESRACS*CRASST
Trigger: GGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGCGA...TTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp TTCTCCAAAGGGAGCTACTATGGCCCTGACAGCCCAGCTGCTGAGGAAGCACAGTCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FSKGSYYGPDSPAAEEAQSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...CTGTGCTTCCTCAGCAGCTGGGCTGTCAGGGCCATAGTAGCTCCCTTTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp CTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGCCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: LDPSPGQGKMLSCYCSPGPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...CCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp AGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCGACAGGACACCACGCTaGGCCACCTGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: STATTQKFRLQASSRSLCDRTPR*ATWEAS
Trigger: GGAGGCTTCCCAGGTGGCCCAGCGTGGTGTCCTGTC...GCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp CAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGTACCGCGATGCTGGCTaGGGAGCCGGGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: QYCHHTEVQVTSLFQILMYRDAG*GAGADA
Trigger: AGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGTA...CATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CCA 90 bp TTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGCAGGTGGCTGACACCTaGCTGCTGGCCCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LEIPRPKSRAREDAFLLLQVADT*LLALEA
Trigger: AGCTTCCAGGGCCAGCAGCCAGGTGTCAGCCACCTG...CAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CCA 90 bp ACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAATTCCCACACGGGTTTCCACTaGGACCCCTGCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: TSTCQNNFRPLAHNPGNSHTGFH*DPCRKP
Trigger: TGGTTTCCTGCAGGGGTCCCAGTGGAAACCCGTGTG...GGAATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR TCA 90 bp CTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCGTACAGGTCCACGTCTaGCCGGGGGTAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: LPDPYASGREDKLEIPRPVQVHV*PGVALT
Trigger: TGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTAC...GGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTAGTACAGGTCCACGTCTaGCCGGGGGTAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLVQVHV*PGVALT
Trigger: TGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTAC...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAACATTCTGCAGGCATATaGTGTTGTGCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: ALIQGDYTGGPQYCHHTEHSAGI*CCAWRC
Trigger: GCACCGCCAGGCACAACATCATATGCCTGCAGAATG...TTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp CACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCATTCTGCAGGCATATaGTGTTGTGCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: HWWATVLPPHRSSGYKPLHSAGI*CCAWRC
Trigger: GCACCGCCAGGCACAACATCATATGCCTGCAGAATG...AAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCTGGCTCTCACTCTaGCCCAGTTTGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: EIPRPKSRAREDAFLLLFPWLSL*PSLRLM
Trigger: CATGAGCCGCAAACTGGGTCAGAGTGAGAGCCAGGG...GAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCCTGGCTCTCACTCTaGCCCAGTTTGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: RLHWWATVLPPHRSSGYKPWLSL*PSLRLM
Trigger: CATGAGCCGCAAACTGGGTCAGAGTGAGAGCCAGGG...CTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGGGGAGCCGGGGCTaGTGCTGTTCACTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLLGSRG*CCSLWR
Trigger: TCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAG...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCAGGCATATGATGTTGTaGCTGGCGGTGCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: MLQPSSPFPAQRVGTSLSRHMML*LAVRTW
Trigger: CCAAGTCCGCACCGCCAGGCACAACATCATATGCCT...GCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000543699.5
CDS-3UTR GCA 90 bp ATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGCATATGATGTTGTaGCTGGCGGTGCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: IPRPKSRAREDAFLLLFPRHMML*LAVRTW
Trigger: CCAAGTCCGCACCGCCAGGCACAACATCATATGCCT...GGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CGCCCACTTGCCCACAATCCAGGGAATTCCTATTTAGGGCCGTGGCCTAATTTGGGCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 4 (lower is better)
Translates to: RPLAHNPGNSYLGPWPNLGPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGCC...CAAATTAGGCCACGGCCCTAAATAGGAATTCCCTGGATTGTGGGCAAGTGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS-3UTR GCA 90 bp CAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: QGEKTSWKSLDPSPGQGKGGPQY*HHTEVQ
Trigger: CTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC...CTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAGCTATGCATGGTGGTaGACGCCTGTGGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LQGEKTSWKSLDPSPGQGSYAWW*TPVVPD
Trigger: ATCTGGGACCACAGGCGTGCACCACCATGCATAGCT...CCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp TGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAAGCTATGCATGGTGGTaGACGCCTGTGGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: WWATVLPPHRSSGYKPLPSYAWW*TPVVPD
Trigger: ATCTGGGACCACAGGCGTGCACCACCATGCATAGCT...TGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp CTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCCTACGGCTCCGCCCATaGGCCAAAACACCACAGCCG +
Preference number: 4 (lower is better)
Translates to: LPDPYASGREDKLEIPRPLRLRP*AKTPQP
Trigger: CGGCTGTGGTGTTTTGGCGCATGGGCGGAGCCGTAG...GGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS-3UTR GCA 90 bp ACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAAGCCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 4 (lower is better)
Translates to: TQVQGKGRCFPVTVPQGQAPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGGC...TTGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS-3UTR GCA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGCACACAACCGTCCTaGCTGCCTCCTCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: DPYASGREDKLEIPRPKSSTQPS*LPPHRA
Trigger: TGCCCGGTGAGGAGGCAGGCAGGACGGTTGTGTGCT...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR CCA 90 bp CAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCCGCCGCATCAGCTCCTaGACGTCGCTGACAGTCACG +
Preference number: 4 (lower is better)
Translates to: QASSRSLCFRERRQVGNPRRISS*TSLTVT
Trigger: CGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCG...GGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTCTGGCGGTGCGGACTTaGTACAGGTCCACGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCLAVRT*YRSTSD
Trigger: GTCAGACGTGGACCTGTACCAAGTCCGCACCGCCAG...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp ACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCTTTGGCGAAGGCCCGTaGAGGGCCCTGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: TATTQKFRLQASSRSLCFFGEGP*RALALT
Trigger: AGTGAGAGCCAGGGCCCTCCACGGGCCTTCGCCAAA...GAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 4 (lower is better)
Translates to: AQQSFSCPACWNKSKLVFGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...AAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CCA 90 bp TGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 4 (lower is better)
Translates to: WWATVLPPHRSSGYKPLPGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...TGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAGAGCTTGCTGCCCTCTaGTGGGTTCCTAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DPSPGQGKMLSCYCSPGTELAAL*WVPKEE
Trigger: TTCCTCTTTAGGAACCCACCAGAGGGCAGCAAGCTC...TGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCAGAAAGTAGGATGGTaGGTGCCAGGGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KSLDPSPGQGKMLSCYCSQKVGW*VPGPPH
Trigger: GTGAGGGGGCCCTGGCACCCACCATCCTACTTTCTG...GGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS-3UTR TCA 90 bp ATCACTGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGCGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: ITVTFRGFPSLCCTTLPMRHSWP*SALLSP
Trigger: AGGAGATAGAAGCGCAGATCAAGGCCAACTATGACG...CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540962.5
ENST00000543699.5
CDS-3UTR TCA 90 bp AGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACATTCTGCAGGCATATaGTGTTGTGCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: REITLVGHSTATTQKFRLHSAGI*CCAWRC
Trigger: GCACCGCCAGGCACAACATCATATGCCTGCAGAATG...TAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCCATTCTGCAGGCATATaGTGTTGTGCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: ITLVGHSTATTQKFRLQAHSAGI*CCAWRC
Trigger: GCACCGCCAGGCACAACATCATATGCCTGCAGAATG...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTCTGGGGAGCCGGGGCTaGTGCTGTTCACTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: VQVTSLFQILMLQGEKTSLGSRG*CCSLWR
Trigger: TCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAG...ACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACGAAATTCAGCTGGGGTaGCAACAGGGTCATATCAGC +
Preference number: 4 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDEIQLG*QQGHIS
Trigger: GCTGATATGACCCTGTTGTCACCCCAGCTGAATTTC...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp GGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTCTTCTGACCCCATCTaGGCTTTGGTTTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GHSTATTQKFRLQASSRSSSDPI*ALVWEG
Trigger: ACCCTCCCAAACCAAAGCTCAGATGGGGTCAGAAGA...GGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp ATAATAATCACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCGGCAGGAGGACTGCTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: IIITPVPARITSAHLPTIGRRTA*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGCAGTCCTCCTGCC...GATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATTATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp GACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGCACTTGCAGACCATATaGTGTTGTGCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: DKLEIPRPKSRAREDAFLHLQTI*CCAWRC
Trigger: GCACCGCCAGGCACAACATCATATGGTCTGCAAGTG...CAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540962.5
CDS-3UTR TCA 90 bp TTTAAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCCCTGGGCATGGACTTaGGTGGCCAACCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: FKNALIQGDYTGGPQYCHPWAWT*VANPWI
Trigger: AATCCAGGGGTTGGCCACTCAAGTCCATGCCCAGGG...GTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR TCA 90 bp AGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCGGCTGGGGGCAGATATaGCACAGGGTGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: STATTQKFRLQASSRSLCGWGQI*HRVHQL
Trigger: AAGCTGGTGCACCCTGTGTCATATCTGCCCCCAGCC...GCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR GCA 90 bp GGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATCTTCTATCTCCTCCTTaGGCCGCATCAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GREDKLEIPRPKSRAREDLLSPP*AASAPG
Trigger: TCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAG...ATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp AAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACCTTCTATCTCCTCCTTaGGCCGCATCAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KNALIQGDYTGGPQYCHHLLSPP*AASAPG
Trigger: TCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAG...GTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGTGTTGTGCCTGGCGGTaGGGACTTGGTACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RLHWWATVLPPHRSSGYKCCAWR*GLGTGP
Trigger: TGGACCTGTACCAAGTCCGCACCGCCAGGCACAACA...CTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTGTGCCTGGCGGTaGGGACTTGGTACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SWKSLDPSPGQGKMLSCYCCAWR*GLGTGP
Trigger: TGGACCTGTACCAAGTCCGCACCGCCAGGCACAACA...GTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTTGTTGTGCCTGGCGGTaGGGACTTGGTACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQYCHHTEVQVTSLFQILCCAWR*GLGTGP
Trigger: TGGACCTGTACCAAGTCCGCACCGCCAGGCACAACA...AAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGAGGCATATGATGTTGTaGCTGGCGGTGCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: DKLEIPRPKSRAREDAFLRHMML*LAVRTW
Trigger: CCAAGTCCGCACCGCCAGGCACAACATCATATGCCT...CAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CAGTACTTAACCATTTCCGTATCCACAGCAGCAAGGCCTCAGTGCAAAGAAATAGCCATGTCCCGGGCCTaGTTCTCCTTGTCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: QYLTISVSTAARPQCKEIAMSRA*FSLSRA
Trigger: CGCTCGCGACAAGGAGAAGCAGGCCCGGGACATGGC...TATTTCTTTGCACTGAGGCCTTGCTGCTGTGGATACGGAAATGGTTAAGTACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCACTCTGACCCAGTTTaGGGCTCATGGCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFHSDPV*GSWPLC
Trigger: ACAAAGAGGCCATGAGCCGCAAACTGGGTCAGAGTG...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAATTCCATCTCATCATCCACTTaGAGACCCGCGATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSTCQNNFRPLAHNPGNSISSST*RPAMLA
Trigger: AGCCAGCATCGCGGGTCTGCAAGTGGATGATGAGAT...GGAATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp ATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: IPRPKSRAREDAFLLLFPQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...GGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp GGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GREDKLEIPRPKSRAREDGGPQY*HHTEVQ
Trigger: CTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC...ATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGAGGAATAATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAGACCATATGATGTTGTaGCTGGCGGTGCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: RGIMLQPSSPFPAQRVGTDHMML*LAVRTW
Trigger: CCAAGTCCGCACCGCCAGGCACAACATCATATGGTC...TGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACATTATTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540962.5
CDS-3UTR GCA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTGGCTTCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCGFPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCC...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp CAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGTGGCTGACACCTGGCTaGTGGCCCTGGAAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: QYCHHTEVQVTSLFQILMWLTPG*WPWKLE
Trigger: CTCTAGCTTCCAGGGCCAGCAGCCAGGTGTCAGCCA...CATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp AGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCCAGGGGCTCTACTCATaGCCTCACAACTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSPFPAQRVGTSLSWCFSQGLYS*PHNYPG
Trigger: CCCAGGGTAGTTGTGAGGGCATGAGTAGAGCCCCTG...GGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp AAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACATCTCATCATCCACTTaGAGACCCGTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KNALIQGDYTGGPQYCHHISSST*RPVSPG
Trigger: CCCAGGGGACACGGGTCTGCAAGTGGATGATGAGAT...GTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR GCA 90 bp GATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCCGCCCACACTGCCATaGCCCAGTGATGGTAAATTG +
Preference number: 4 (lower is better)
Translates to: DYTGGPQYCHHTEVQVTSPPTLP*PSDGKL
Trigger: CAATTTACCATCACTGGGGCATGGCAGTGTGGGCGG...GCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR GCA 90 bp CAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGCTGTCAGGTCAAATAGACAGGGTGCACCAGCTTaGGGTTCTCAGCACAAAGCG +
Preference number: 4 (lower is better)
Translates to: QHVCGYQRGIRMAVRSNRQGAPA*GSQHKA
Trigger: CGCTTTGTGCTGAGAACCGCAAGCTGGTGCACCCTG...TCTATTTGACCTGACAGCCATACGTATTCCCCTCTGGTAGCCACAGACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR GCA 90 bp ACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATCTCCAGGTCTCATGGATaGAGCACACAACCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TCGWKHTAIPIPSRQAGISRSHG*STQPSC
Trigger: GCAGGACGGTTGTGTGCTGCATCCATGAGACCTGGA...GATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR CCA 90 bp GTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTCGCCGCATCAGCTCCTaGACGTCGCTGACAGTCACG +
Preference number: 4 (lower is better)
Translates to: VQVTSLFQILMLQGEKTSRRISS*TSLTVT
Trigger: CGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCG...ACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GCAAACATTGGTAAACACAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGCTGGCGGTGCGGACTTaGTACAGGTCCACGTCTGAC +
Preference number: 4 (lower is better)
Translates to: ANIGKHSMSVATRGEYVWLAVRT*YRSTSD
Trigger: GTCAGACGTGGACCTGTACCAAGTCCGCACCGCCAG...CCATACGTATTCCCCTCTGGTAGCCACAGACATGCTGTGTTTACCAATGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GTTTTTAAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCTTTGGCGAAGGCCCGTaGAGGGCCCTGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: VFKNALIQGDYTGGPQYCFGEGP*RALALT
Trigger: AGTGAGAGCCAGGGCCCTCCACGGGCCTTCGCCAAA...GCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTTAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAATTTGGCGAAGGCCCGTaGAGGGCCCTGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: GYKPLPDPYASGREDKLEFGEGP*RALALT
Trigger: AGTGAGAGCCAGGGCCCTCCACGGGCCTTCGCCAAA...TTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp ACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAATCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TQVQGKGRCFPVTVPQGQSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...TTGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp TCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAACCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: SGREDKLEIPRPKSRAREPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...TTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCTTGCTGCCCTCTGGTaGGTTCCTAAAGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFLAALW*VPKEEA
Trigger: AGCTTCCTCTTTAGGAACCCACCAGAGGGCAGCAAG...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp ATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCCTTGCTGCCCTCTGGTaGGTTCCTAAAGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: IPRPKSRAREDAFLLLFPLAALW*VPKEEA
Trigger: AGCTTCCTCTTTAGGAACCCACCAGAGGGCAGCAAG...GGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGAGACAGAAAGTAGGATaGTGGGTGCCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RLHWWATVLPPHRSSGYKRQKVG*WVPGPP
Trigger: AGGGGGCCCTGGCACCCACCATCCTACTTTCTGTCT...CTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS-3UTR CCA 90 bp AGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGCCTCCTTCCCACAGGTaGCTGACACCTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSGYKPLPDPYASGREDKPPSHR*LTPGCW
Trigger: CCAGCAGCCAGGTGTCAGCCACCTGTGGGAAGGAGG...CTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CCA 90 bp CGCCCACTTGCCCACAATCCAGGGAATTCCTATTTAGGGCCGTGGCCTAATTTGCCCTCACAACTACCCTaGGGTGGGCACTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RPLAHNPGNSYLGPWPNLPSQLP*GGHCVF
Trigger: AAAAACACAGTGCCCACCCCAGGGTAGTTGTGAGGG...CAAATTAGGCCACGGCCCTAAATAGGAATTCCCTGGATTGTGGGCAAGTGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR TCA 90 bp CGCCCACTTGCCCACAATCCAGGGAATTCCTATTTAGGGCCGTGGCCTAATTTGCGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: RPLAHNPGNSYLGPWPNLRHSWP*SALLSP
Trigger: AGGAGATAGAAGCGCAGATCAAGGCCAACTATGACG...CAAATTAGGCCACGGCCCTAAATAGGAATTCCCTGGATTGTGGGCAAGTGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAAGTACAGGTCCACGTCTaGCCGGGGGTAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: VTSLFQILMLQGEKTSWKVQVHV*PGVALT
Trigger: TGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTAC...TTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCATTCTGCAGGCATATaGTGTTGTGCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KSLDPSPGQGKMLSCYCSHSAGI*CCAWRC
Trigger: GCACCGCCAGGCACAACATCATATGCCTGCAGAATG...GGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp CCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGAACCAGCCAGAGCCACTaGGGCAGAAGGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLPDPYASGREDKLEIPRTSQSH*GRRLSA
Trigger: AGCAGAGAGCCTTCTGCCTCAGTGGCTCTGGCTGGT...TCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR GCA 90 bp CCAATCCCATCAAGGCAAGCTGGTATCTGTATCCAACCACAGCAAAACCAGTCCCTTCTATCTCCTCCTTaGGCCGCATCAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PIPSRQAGICIQPQQNQSLLSPP*AASAPG
Trigger: TCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAG...GGACTGGTTTTGCTGTGGTTGGATACAGATACCAGCTTGCCTTGATGGGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp AGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACCTTCTATCTCCTCCTTaGGCCGCATCAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SWKSLDPSPGQGKMLSCYLLSPP*AASAPG
Trigger: TCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAG...GTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp GACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAGCTCGTTCATCCCAATaGCTTTTTGGCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DPSPGQGKMLSCYCSPGTARSSQ*LFGFPA
Trigger: TGCTGGAAAGCCAAAAAGGCATTGGGATGAACGAGC...TGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTGTTGTGCCTGGCGGTaGGGACTTGGTACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QASSRSLCFRERRQVGNPCCAWR*GLGTGP
Trigger: TGGACCTGTACCAAGTCCGCACCGCCAGGCACAACA...GGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CACTGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTCACCTGCTTCATCACTaGCTTGTGATCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HCHIQGLPLTVLHHTANVHLLHH*LVIILQ
Trigger: CTGCAGAATGATCACAAGGCAGTGATGAAGCAGGTG...AACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR GCA 90 bp ACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAATTCACTCTGACCCAGTTTaGGGCTCATGGCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: TPVPARITSAHLPTIQGIHSDPV*GSWPLC
Trigger: ACAAAGAGGCCATGAGCCGCAAACTGGGTCAGAGTG...AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp AGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACACTCTGACCCAGTTTaGGGCTCATGGCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: REITLVGHSTATTQKFRLHSDPV*GSWPLC
Trigger: ACAAAGAGGCCATGAGCCGCAAACTGGGTCAGAGTG...TAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAATTATCTCATCATCCACTTaGAGACCCGCGATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TPVPARITSAHLPTIQGIISSST*RPAMLA
Trigger: AGCCAGCATCGCGGGTCTGCAAGTGGATGATGAGAT...AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp GACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: DKLEIPRPKSRAREDAFLQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...CAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp AGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: RLHWWATVLPPHRSSGYKGGPQY*HHTEVQ
Trigger: CTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC...CTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ATAATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: IMLQPSSPFPAQRVGTSLGGPQY*HHTEVQ
Trigger: CTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC...TAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR GCA 90 bp GAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCGGTGGGCCACAGTACTaGCACCACACAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: EDKLEIPRPKSRAREDAFGGPQY*HHTEVQ
Trigger: CTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC...GAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GCAAACATTGGTAAACACAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGGGCTTCCCCTCACTGTaGTGCACCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: ANIGKHSMSVATRGEYVWGFPSL*CTTLPM
Trigger: CATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCC...CCATACGTATTCCCCTCTGGTAGCCACAGACATGCTGTGTTTACCAATGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR GCA 90 bp GGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAATCTCCCCGCCCACACTaGCATGCCCCAGTGATGGTA +
Preference number: 4 (lower is better)
Translates to: GYKPLPDPYASGREDKLESPRPH*HAPVMV
Trigger: TACCATCACTGGGGCATGGCAGTGTGGGCGGGGAGA...TTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR GCA 90 bp ACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGATTCCACTGGGACCCCTaGAGGAAACCAGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TQKFRLQASSRSLCFRERFHWDP*RKPARA
Trigger: GGCTCTGGCTGGTTTCCTGCAGGGGTCCCAGTGGAA...TCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR CCA 90 bp TTTGCAATTGCTAGCCTGTTTTGCCCAACTTTCTATGAAGCTCTTCTGACCCCACGCCGCATCAGCTCCTaGACGTCGCTGACAGTCACG +
Preference number: 4 (lower is better)
Translates to: FAIASLFCPTFYEALLTPRRISS*TSLTVT
Trigger: CGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCG...TGGGGTCAGAAGAGCTTCATAGAAAGTTGGGCAAAACAGGCTAGCAATTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTCTGGCGGTGCGGACTTaGTACAGGTCCACGTCTGAC +
Preference number: 4 (lower is better)
Translates to: VQVTSLFQILMLQGEKTSLAVRT*YRSTSD
Trigger: GTCAGACGTGGACCTGTACCAAGTCCGCACCGCCAG...ACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCAGTGACTGGAAGTTCTaGGTGTTCACAGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFSDWKF*VFTEPN
Trigger: GTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACT...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp AGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTATCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: REITLVGHSTATTQKFRLSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...TAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCTCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DYTGGPQYCHHTEVQVTSSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...GCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp AAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACTCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KNALIQGDYTGGPQYCHHSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...GTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp TCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAATCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SGREDKLEIPRPKSRARESCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...TTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp CCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGCCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: PPHRSSGYKPLPDPYASGPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...CCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp AGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACCCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: SWKSLDPSPGQGKMLSCYPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...GTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGATTAGCTATGCATGGTaGTGCACGCCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GEKTSWKSLDPSPGQGKMISYAW*CTPVVP
Trigger: TGGGACCACAGGCGTGCACCACCATGCATAGCTAAT...CATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp TCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGAGTGTGAGAACCTGTaGCTGGAAGCACACAGCAAT +
Preference number: 4 (lower is better)
Translates to: SLDPSPGQGKMLSCYCSPECENL*LEAHSN
Trigger: ATTGCTGTGTGCTTCCAGCCACAGGTTCTCACACTC...TGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp TTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTGTGAAACCAGTCACATaGTTCAGGGGAGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LHWWATVLPPHRSSGYKPVKPVT*FRGGAL
Trigger: CAAAGCCCCTCCCCTGAACCATGTGACTGGTTTCAC...AGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CCA 90 bp ACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATCGCAGACAATTCCAGCTaGCTGGGGGCAGATATGACA +
Preference number: 4 (lower is better)
Translates to: TCGWKHTAIPIPSRQAGIADNSS*LGADMT
Trigger: TGTCATATCTGCCCCCAGCCAGCTGGAATTGTCTGC...GATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR TCA 90 bp ACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATCCGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: TCGWKHTAIPIPSRQAGIRHSWP*SALLSP
Trigger: AGGAGATAGAAGCGCAGATCAAGGCCAACTATGACG...GATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp CTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGTTCATCACTGCCTTGTaGTCATTCTGCAGGCATATG +
Preference number: 4 (lower is better)
Translates to: LDPSPGQGKMLSCYCSPGFITAL*SFCRHM
Trigger: CATATGCCTGCAGAATGATCACAAGGCAGTGATGAA...CCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp TCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SLDPSPGQGKMLSCYCSPANVMQ*LEVLGV
Trigger: AACACCCAGAACTTCCAGTCACTGCATAACATTGGC...TGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR TCA 90 bp GATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCCGTGGCCTAATTTGTaGAAGAGGCCAAGCCTAAGT +
Preference number: 4 (lower is better)
Translates to: DYTGGPQYCHHTEVQVTSPWPNL*KRPSLS
Trigger: ACTTAGGCTTGGCCTCTTTCACAAATTAGGCCACGG...GCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCGAAATTCAGCTGGGGTaGCAACAGGGTCATATCAGC +
Preference number: 4 (lower is better)
Translates to: ITLVGHSTATTQKFRLQAEIQLG*QQGHIS
Trigger: GCTGATATGACCCTGTTGTCACCCCAGCTGAATTTC...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp GGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACTCTATGAAGCTCTTCTaGCCCCATCTGAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GRLHWWATVLPPHRSSGYSMKLF*PHLSFG
Trigger: ACCAAAGCTCAGATGGGGTCAGAAGAGCTTCATAGA...GTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCTCTATGAAGCTCTTCTaGCCCCATCTGAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFSMKLF*PHLSFG
Trigger: ACCAAAGCTCAGATGGGGTCAGAAGAGCTTCATAGA...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp TGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGCACAGCATAGTGGGTTaGAGAGCGGCCCCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: CHHTEVQVTSLFQILMLQHSIVG*RAAPKN
Trigger: GTTTTTGGGGGCCGCTCTTCAACCCACTATGCTGTG...CTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp CTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCCTTCTATCTCCTCCTTaGGCCGCATCAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LPDPYASGREDKLEIPRPLLSPP*AASAPG
Trigger: TCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAG...GGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTTCTATCTCCTCCTTaGGCCGCATCAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLLLSPP*AASAPG
Trigger: TCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAG...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp GGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCGCTCGTTCATCCCAATaGCTTTTTGGCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GHSTATTQKFRLQASSRSARSSQ*LFGFPA
Trigger: TGCTGGAAAGCCAAAAAGGCATTGGGATGAACGAGC...GGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTATGTTGTGCCTGGCGGTaGGGACTTGGTACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLFQILMLQGEKTSWKSLCCAWR*GLGTGP
Trigger: TGGACCTGTACCAAGTCCGCACCGCCAGGCACAACA...TAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGCATATGATGTTGTaGCTGGCGGTGCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: DPYASGREDKLEIPRPKSRHMML*LAVRTW
Trigger: CCAAGTCCGCACCGCCAGGCACAACATCATATGCCT...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGCACCTGCTTCATCACTaGCTTGTGATCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QGEKTSWKSLDPSPGQGKHLLHH*LVIILQ
Trigger: CTGCAGAATGATCACAAGGCAGTGATGAAGCAGGTG...CTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTCACTCTGACCCAGTTTaGGGCTCATGGCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: REDKLEIPRPKSRAREDAHSDPV*GSWPLC
Trigger: ACAAAGAGGCCATGAGCCGCAAACTGGGTCAGAGTG...AGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCACTCTGACCCAGTTTaGGGCTCATGGCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: EDKLEIPRPKSRAREDAFHSDPV*GSWPLC
Trigger: ACAAAGAGGCCATGAGCCGCAAACTGGGTCAGAGTG...GAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCATCTCATCATCCACTTaGAGACCCGCGATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSPFPAQRVGTSLSWCFSISSST*RPAMLA
Trigger: AGCCAGCATCGCGGGTCTGCAAGTGGATGATGAGAT...GGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS-3UTR GCA 90 bp GAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: EKTSWKSLDPSPGQGKMLQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...AAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp CCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: PPHRSSGYKPLPDPYASGQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...CCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: KSLDPSPGQGKMLSCYCSQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...GGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp AGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCCAGCAGTCCTTTTCCTaGCCAGCGTGTTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: SSPFPAQRVGTSLSWCFSQQSFS*PACWNK
Trigger: CTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTG...GGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR GCA 90 bp ACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAAAATCACACCAGTACCTaGCAGAATAACTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: TQVQGKGRCFPVTVPQGQNHTST*QNNFRP
Trigger: TGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATT...TTGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp AGAACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTAAGGAACACAGGGCTTaGCTGGCAGAACTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: RTCGWKHTAIPIPSRQAGKEHRA*LAELPK
Trigger: TTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTT...ACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp GGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATTTCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 4 (lower is better)
Translates to: GREDKLEIPRPKSRAREDFPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA...ATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp GCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGCTCGTTCATCCCAATaGCTTTTTGCTGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALIQGDYTGGPQYCHHTEARSSQ*LFAGGK
Trigger: CTTTCCTCCAGCAAAAAGGCATTGGGATGAACGAGC...TTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp CCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGCAGAAGGCTCTCTGCTaGTGTCATTTTAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: PRPKSRAREDAFLLLFPRQKALC*CHFRRM
Trigger: CATTCTCCTAAAATGACAGCAGCAGAGAGCCTTCTG...CCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR CCA 90 bp TTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTAGTGACTGGAAGTTCTaGGTGTTCACAGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: LHWWATVLPPHRSSGYKPSDWKF*VFTEPN
Trigger: GTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACT...AGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp CACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCAGGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: HIQGLPLTVLHHTANVMQGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...CTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CCA 90 bp TCACTGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: SLSHSGASPHCAAPHCQCGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...ACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CCA 90 bp GGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACCCCATCAAGGCAAGCTaGTATCTGTATCCAACCACA +
Preference number: 4 (lower is better)
Translates to: GRLHWWATVLPPHRSSGYPIKAS*YLYPTT
Trigger: TGTGGTTGGATACAGATACCAGCTTGCCTTGATGGG...GTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GTTTTTAAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCGGGCATGGACTTGAGTaGCCAACCCCTGGATTACCG +
Preference number: 4 (lower is better)
Translates to: VFKNALIQGDYTGGPQYCGHGLE*PTPGLP
Trigger: CGGTAATCCAGGGGTTGGCCACTCAAGTCCATGCCC...GCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTTAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR TCA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTCGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCRHSWP*SALLSP
Trigger: AGGAGATAGAAGCGCAGATCAAGGCCAACTATGACG...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR TCA 90 bp AGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACCGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: SWKSLDPSPGQGKMLSCYRHSWP*SALLSP
Trigger: AGGAGATAGAAGCGCAGATCAAGGCCAACTATGACG...GTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR TCA 90 bp GGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCTTCATCACTGCCTTGTaGTCATTCTGCAGGCATATG +
Preference number: 4 (lower is better)
Translates to: GPQYCHHTEVQVTSLFQIFITAL*SFCRHM
Trigger: CATATGCCTGCAGAATGATCACAAGGCAGTGATGAA...GATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp TCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCATTCATCACTGCCTTGTaGTCATTCTGCAGGCATATG +
Preference number: 4 (lower is better)
Translates to: SLDPSPGQGKMLSCYCSPFITAL*SFCRHM
Trigger: CATATGCCTGCAGAATGATCACAAGGCAGTGATGAA...TGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCCCGTGGCCTAATTTGTaGAAGAGGCCAAGCCTAAGT +
Preference number: 4 (lower is better)
Translates to: KTSWKSLDPSPGQGKMLSPWPNL*KRPSLS
Trigger: ACTTAGGCTTGGCCTCTTTCACAAATTAGGCCACGG...GGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp TGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTCCGTGGCCTAATTTGTaGAAGAGGCCAAGCCTAAGT +
Preference number: 4 (lower is better)
Translates to: WKSLDPSPGQGKMLSCYCPWPNL*KRPSLS
Trigger: ACTTAGGCTTGGCCTCTTTCACAAATTAGGCCACGG...ACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATTTGCCCAACTTTCTATaGAGCTCTTCTGACCCCATC +
Preference number: 4 (lower is better)
Translates to: GREDKLEIPRPKSRAREDLPNFL*SSSDPI
Trigger: GATGGGGTCAGAAGAGCTTCATAGAAAGTTGGGCAA...ATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp TGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTTCTTACTAGCGAAGTaGAAGGAGCTTGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: WKSLDPSPGQGKMLSCYCFLLAK*KELAAL
Trigger: GAGGGCAGCAAGCTCCTTTCACTTCGCTAGTAAGAA...ACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAGTACACAAAAGCAGTaGAACCAGTCACATGGTTCA +
Preference number: 4 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDSTQKQ*NQSHGS
Trigger: TGAACCATGTGACTGGTTTCACTGCTTTTGTGTACT...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCGCTCGTTCATCCCAATaGCTTTTTGGCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ITLVGHSTATTQKFRLQAARSSQ*LFGFPA
Trigger: TGCTGGAAAGCCAAAAAGGCATTGGGATGAACGAGC...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp TTTGCAATTGCTAGCCTGTTTTGCCCAACTTTCTATGAAGCTCTTCTGACCCCATGTTGTGCCTGGCGGTaGGGACTTGGTACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FAIASLFCPTFYEALLTPCCAWR*GLGTGP
Trigger: TGGACCTGTACCAAGTCCGCACCGCCAGGCACAACA...TGGGGTCAGAAGAGCTTCATAGAAAGTTGGGCAAAACAGGCTAGCAATTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp ATAATAATCACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCAGGCATATGATGTTGTaGCTGGCGGTGCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: IIITPVPARITSAHLPTIRHMML*LAVRTW
Trigger: CCAAGTCCGCACCGCCAGGCACAACATCATATGCCT...GATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATTATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp TCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAACACCTGCTTCATCACTaGCTTGTGATCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGREDKLEIPRPKSRAREHLLHH*LVIILQ
Trigger: CTGCAGAATGATCACAAGGCAGTGATGAAGCAGGTG...TTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCCCCCACCTGCTTCATCACTaGCTTGTGATCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPFPAQRVGTSLSWCFSPHLLHH*LVIILQ
Trigger: CTGCAGAATGATCACAAGGCAGTGATGAAGCAGGTG...GGGGGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000543699.5
CDS-3UTR GCA 90 bp ACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATCCACCTGCTTCATCACTaGCTTGTGATCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TCGWKHTAIPIPSRQAGIHLLHH*LVIILQ
Trigger: CTGCAGAATGATCACAAGGCAGTGATGAAGCAGGTG...GATACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp GCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AQQSFSCPACWNKSKLVFTLPML*SDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGT...AAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR GCA 90 bp TCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLDPSPGQGKMLSCYCSPTLPML*SDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGT...TGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp GGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGTGTGCTGCACCACACTaGCAATGTTATGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: GEKTSWKSLDPSPGQGKMCAAPH*QCYAVT
Trigger: AGTCACTGCATAACATTGGCAGTGTGGTGCAGCACA...CATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp CTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTGTGCTGCACCACACTaGCAATGTTATGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LNPGRLHWWATVLPPHRSCAAPH*QCYAVT
Trigger: AGTCACTGCATAACATTGGCAGTGTGGTGCAGCACA...ACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCGCAGCAAGGCCTCAGTaGAAAGAAATATGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFAARPQ*KEICWS
Trigger: TGACCAACATATTTCTTTGCACTGAGGCCTTGCTGC...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp CCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAAGGAACACAGGGCTTaGCTGGCAGAACTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PPHRSSGYKPLPDPYASGKEHRA*LAELPK
Trigger: TTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTT...CCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp AGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCTTCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 4 (lower is better)
Translates to: SSPFPAQRVGTSLSWCFSFPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA...GGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR GCA 90 bp AGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGATCTCATCATCCACTTaGAGACCCGTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSGYKPLPDPYASGREDKISSST*RPVSPG
Trigger: CCCAGGGGACACGGGTCTGCAAGTGGATGATGAGAT...CTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CCA 90 bp CCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTAGTGACTGGAAGTTCTaGGTGTTCACAGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: PQYCHHTEVQVTSLFQILSDWKF*VFTEPN
Trigger: GTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACT...AAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp AGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTAGTGACTGGAAGTTCTaGGTGTTCACAGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: REDKLEIPRPKSRAREDASDWKF*VFTEPN
Trigger: GTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACT...AGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp AAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCAGTGACTGGAAGTTCTaGGTGTTCACAGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: KTSWKSLDPSPGQGKMLSSDWKF*VFTEPN
Trigger: GTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACT...GGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDMLCSD*KFWVFT
Trigger: TGTGAACACCCAGAACTTCCAGTCACTGCATAACAT...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp CCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: PGRLHWWATVLPPHRSSGMLCSD*KFWVFT
Trigger: TGTGAACACCCAGAACTTCCAGTCACTGCATAACAT...ACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp AGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTCCTGCCCAGCGTGTTaGAACAAGTCTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: STATTQKFRLQASSRSLCSCPAC*NKSKLV
Trigger: CACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGA...GCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: ALIQGDYTGGPQYCHHTEGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...TTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp TTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 4 (lower is better)
Translates to: FQILMLQGEKTSWKSLDPGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...TGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GTTTTTAAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: VFKNALIQGDYTGGPQYCPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...GCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTTAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp CTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGAGCTTGCTGCCCTCTaGTGGGTTCCTAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPPHRSSGYKPLPDPYASELAAL*WVPKEE
Trigger: TTCCTCTTTAGGAACCCACCAGAGGGCAGCAAGCTC...TGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGTTCGAGACCAACCTaGTCAACACAGGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: DPYASGREDKLEIPRPKSSSRPT*STQGDP
Trigger: AGGGTCTCCCTGTGTTGACCAGGTTGGTCTCGAACT...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp TTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGAACACAGGGCTTGCCTaGCAGAACTGCCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: LEIPRPKSRAREDAFLLLNTGLA*QNCQNR
Trigger: TCTGTTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTT...CAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp TGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTGTGAGAACCTGTGGCTaGAAGCACACAGCAATACCA +
Preference number: 4 (lower is better)
Translates to: WKSLDPSPGQGKMLSCYCVRTCG*KHTAIP
Trigger: TGGTATTGCTGTGTGCTTCCAGCCACAGGTTCTCAC...ACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp CCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGAACACAGCATGTCTGTaGCTACCAGAGGGGAATACG +
Preference number: 4 (lower is better)
Translates to: PYASGREDKLEIPRPKSRNTACL*LPEGNT
Trigger: CGTATTCCCCTCTGGTAGCCACAGACATGCTGTGTT...CCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTAGACAGCACCCAGCTGTaGCAGGGCTTTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLDSTQL*QGFDSS
Trigger: AGAAGAATCAAAGCCCTGCCACAGCTGGGTGCTGTC...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CCA 90 bp CACTGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTCCAATGCCTTTTTGCTaGAGGAAAGAAACGTGGTTA +
Preference number: 4 (lower is better)
Translates to: HCHIQGLPLTVLHHTANVPMPFC*RKETWL
Trigger: TAACCACGTTTCTTTCCTCCAGCAAAAAGGCATTGG...AACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CCA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTCCACTAACATCTCATaGAAGACGGCAACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCSTNIS*KTATGG
Trigger: GCCACCTGTTGCCGTCTTCCATGAGATGTTAGTGGA...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR TCA 90 bp GTTACTGTTCCCCAGGGACAATCATCTTTGCAGAGGAATAATGTTGCAGCCCAGCGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: VTVPQGQSSLQRNNVAAQRHSWP*SALLSP
Trigger: AGGAGATAGAAGCGCAGATCAAGGCCAACTATGACG...CTGGGCTGCAACATTATTCCTCTGCAAAGATGATTGTCCCTGGGGAACAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR TCA 90 bp AGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SWKSLDPSPGQGKMLSCYANVMQ*LEVLGV
Trigger: AACACCCAGAACTTCCAGTCACTGCATAACATTGGC...GTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR TCA 90 bp TGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: WKSLDPSPGQGKMLSCYCANVMQ*LEVLGV
Trigger: AACACCCAGAACTTCCAGTCACTGCATAACATTGGC...ACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR TCA 90 bp GAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: EIPRPKSRAREDAFLLLFANVMQ*LEVLGV
Trigger: AACACCCAGAACTTCCAGTCACTGCATAACATTGGC...GAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR TCA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACCGTGGCCTAATTTGTaGAAGAGGCCAAGCCTAAGT +
Preference number: 4 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLPWPNL*KRPSLS
Trigger: ACTTAGGCTTGGCCTCTTTCACAAATTAGGCCACGG...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp CAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGCTGTCAGGTCAAATAGATTGCCCAACTTTCTATaGAGCTCTTCTGACCCCATC +
Preference number: 4 (lower is better)
Translates to: QHVCGYQRGIRMAVRSNRLPNFL*SSSDPI
Trigger: GATGGGGTCAGAAGAGCTTCATAGAAAGTTGGGCAA...TCTATTTGACCTGACAGCCATACGTATTCCCCTCTGGTAGCCACAGACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp ACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCTTCTTACTAGCGAAGTaGAAGGAGCTTGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TATTQKFRLQASSRSLCFFLLAK*KELAAL
Trigger: GAGGGCAGCAAGCTCCTTTCACTTCGCTAGTAAGAA...GAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp AGAGGAATAATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACACAGACCCTTCTCCTCTaGAGTCATAATAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RGIMLQPSSPFPAQRVGTQTLLL*SHNKGD
Trigger: GTCACCTTTATTATGACTTCAGAGGAGAAGGGTCTG...TGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACATTATTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp TATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCATGTGCTGCACCACACTaGCAATGTTATGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: YASGREDKLEIPRPKSRACAAPH*QCYAVT
Trigger: AGTCACTGCATAACATTGGCAGTGTGGTGCAGCACA...TGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp TGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTGTGCTGCACCACACTaGCAATGTTATGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: WKSLDPSPGQGKMLSCYCCAAPH*QCYAVT
Trigger: AGTCACTGCATAACATTGGCAGTGTGGTGCAGCACA...ACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp CCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTTGTGCTGCACCACACTaGCAATGTTATGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: PQYCHHTEVQVTSLFQILCAAPH*QCYAVT
Trigger: AGTCACTGCATAACATTGGCAGTGTGGTGCAGCACA...AAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DPSPGQGKMLSCYCSPGTRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...TGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp CTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LDPSPGQGKMLSCYCSPGRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...CCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp CAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGTCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: QGEKTSWKSLDPSPGQGKSSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...CTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp GGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCTCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: GPQYCHHTEVQVTSLFQISSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...GATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp TCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCATCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: SLDPSPGQGKMLSCYCSPSSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...TGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CCAATCCCATCAAGGCAAGCTGGTATCTGTATCCAACCACAGCAAAACCAGTCCAATCACACCAGTACCTaGCAGAATAACTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PIPSRQAGICIQPQQNQSNHTST*QNNFRP
Trigger: TGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATT...GGACTGGTTTTGCTGTGGTTGGATACAGATACCAGCTTGCCTTGATGGGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp CAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGCTGTCAGGTCAAATAGAAATCACACCAGTACCTaGCAGAATAACTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QHVCGYQRGIRMAVRSNRNHTST*QNNFRP
Trigger: TGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATT...TCTATTTGACCTGACAGCCATACGTATTCCCCTCTGGTAGCCACAGACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCTTCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 4 (lower is better)
Translates to: DPYASGREDKLEIPRPKSFPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCTTCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 4 (lower is better)
Translates to: LPDPYASGREDKLEIPRPFPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA...GGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGTGACTGGAAGTTCTaGGTGTTCACAGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: DPYASGREDKLEIPRPKSSDWKF*VFTEPN
Trigger: GTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACT...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp CAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCCCGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: QSFSCPACWNKSKLVFFPGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...GGGGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CCA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: ITLVGHSTATTQKFRLQAGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: GREDKLEIPRPKSRAREDGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...ATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp GGTCAAAGCCTGACTTTGCAATTGCTAGCCTGTTTTGCCCAACTTTCTATGAAGGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GQSLTLQLLACFAQLSMKGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...CTTCATAGAAAGTTGGGCAAAACAGGCTAGCAATTGCAAAGTCAGGCTTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp TACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCGGGAGATTACACTGGTaGGCCACAGTACTGCCACCA +
Preference number: 4 (lower is better)
Translates to: YKPLPDPYASGREDKLEIGRLHW*ATVLPP
Trigger: TGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCC...GATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp AGGGTCATAAGAAATTCAGCTGGGGTGACAACAGGGTCATATCAGCACTGTAAACCAGGGAGATTACACTaGTGGGCCACAGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: RVIRNSAGVTTGSYQHCKPGRLH*WATVLP
Trigger: TGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGG...TTTACAGTGCTGATATGACCCTGTTGTCACCCCAGCTGAATTTCTTATGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCACCCCATCTGAGCTTTaGTTTGGGAGGGTCATAAGA +
Preference number: 4 (lower is better)
Translates to: KSLDPSPGQGKMLSCYCSTPSEL*FGRVIR
Trigger: TCTTATGACCCTCCCAAACCAAAGCTCAGATGGGGT...GGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAATTAGCTATGCATGGTaGTGCACGCCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLFQILMLQGEKTSWKSLISYAW*CTPVVP
Trigger: TGGGACCACAGGCGTGCACCACCATGCATAGCTAAT...TAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGAGTTCGAGACCAACCTaGTCAACACAGGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: SSGYKPLPDPYASGREDKSSRPT*STQGDP
Trigger: AGGGTCTCCCTGTGTTGACCAGGTTGGTCTCGAACT...CTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCAACACAGGGCTTGCCTaGCAGAACTGCCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: STATTQKFRLQASSRSLCNTGLA*QNCQNR
Trigger: TCTGTTTTGGCAGTTCTGCCAGGCAAGCCCTGTGTT...GCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp ACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAATTAGAGGGGAATACGTATaGCTGTCAGGTCAAATAGAG +
Preference number: 4 (lower is better)
Translates to: TPVPARITSAHLPTIQGIRGEYV*LSGQIE
Trigger: CTCTATTTGACCTGACAGCCATACGTATTCCCCTCT...AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTAAACACAGCATGTCTGTaGCTACCAGAGGGGAATACG +
Preference number: 4 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLNTACL*LPEGNT
Trigger: CGTATTCCCCTCTGGTAGCCACAGACATGCTGTGTT...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCTCCGCAAAACCGGTCTaGCTATATCTATTAGGATCA +
Preference number: 4 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFSAKPV*LYLLGS
Trigger: TGATCCTAATAGATATAGCCAGACCGGTTTTGCGGA...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR CCA 90 bp CCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGAATTTCCAGGTCTCATaGATGCAGCACACAACCGTC +
Preference number: 4 (lower is better)
Translates to: PYASGREDKLEIPRPKSRNFQVS*MQHTTV
Trigger: GACGGTTGTGTGCTGCATCCATGAGACCTGGAAATT...CCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR TCA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTTCATCACTGCCTTGTaGTCATTCTGCAGGCATATG +
Preference number: 4 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCFITAL*SFCRHM
Trigger: CATATGCCTGCAGAATGATCACAAGGCAGTGATGAA...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GTTACTGTTCCCCAGGGACAATCATCTTTGCAGAGGAATAATGTTGCAGCCCAGGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VTVPQGQSSLQRNNVAAQANVMQ*LEVLGV
Trigger: AACACCCAGAACTTCCAGTCACTGCATAACATTGGC...CTGGGCTGCAACATTATTCCTCTGCAAAGATGATTGTCCCTGGGGAACAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR TCA 90 bp CTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LPDPYASGREDKLEIPRPANVMQ*LEVLGV
Trigger: AACACCCAGAACTTCCAGTCACTGCATAACATTGGC...GGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AGGGTCATAAGAAATTCAGCTGGGGTGACAACAGGGTCATATCAGCACTGTAAATCTTCTGACCCCATCTaGGCTTTGGTTTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RVIRNSAGVTTGSYQHCKSSDPI*ALVWEG
Trigger: ACCCTCCCAAACCAAAGCTCAGATGGGGTCAGAAGA...TTTACAGTGCTGATATGACCCTGTTGTCACCCCAGCTGAATTTCTTATGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp CACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAAACTGCCACATACTaGTCACTTACACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HTEVQVTSLFQILMLQGEKTATY*SLTPGA
Trigger: AGCCCCTGGTGTAAGTGATCAGTATGTGGCAGTTTT...CTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp CCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PQYCHHTEVQVTSLFQILTLPML*SDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGT...AAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SWKSLDPSPGQGKMLSCYTLPML*SDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGT...GTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp TTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LEIPRPKSRAREDAFLLLTLPML*SDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGT...CAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR GCA 90 bp TTTAAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACTGTGCTGCACCACACTaGCAATGTTATGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: FKNALIQGDYTGGPQYCHCAAPH*QCYAVT
Trigger: AGTCACTGCATAACATTGGCAGTGTGGTGCAGCACA...GTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AATCACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NHTSTCQNNFRPLAHNPGRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...CCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp GCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: AQQSFSCPACWNKSKLVFRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...AAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR GCA 90 bp TGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: CHIQGLPLTVLHHTANVMRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...CATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR GCA 90 bp TTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTTCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: LHWWATVLPPHRSSGYKPSSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...AGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp AGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCCCCTCTTCCAGATCCTTATaGTTCAGGGAGAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: SPFPAQRVGTSLSWCFSPSSRSL*FRERRQ
Trigger: TTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGA...GGGGGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR GCA 90 bp TCACTGTGCTGCACCACACTGCCAATGTTATGCAGTGACTGGAAGTTCTGGGTGTTTGAATCTCAACTCTaGCATGTACAAGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLCCTTLPMLCSDWKFWVFESQL*HVQAGH
Trigger: ATGCCCAGCTTGTACATGGCAGAGTTGAGATTCAAA...CACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CCA 90 bp CTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: LNPGRLHWWATVLPPHRSMLCSD*KFWVFT
Trigger: TGTGAACACCCAGAACTTCCAGTCACTGCATAACAT...ACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: GEKTSWKSLDPSPGQGKMMLCSD*KFWVFT
Trigger: TGTGAACACCCAGAACTTCCAGTCACTGCATAACAT...CATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp AGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGAGAGGGGAATACGTATaGCTGTCAGGTCAAATAGAG +
Preference number: 4 (lower is better)
Translates to: RLHWWATVLPPHRSSGYKRGEYV*LSGQIE
Trigger: CTCTATTTGACCTGACAGCCATACGTATTCCCCTCT...CTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCACAACTACCCTGGGGTaGGCACTGTGTTTTTCATTT +
Preference number: 4 (lower is better)
Translates to: EIPRPKSRAREDAFLLLFTTTLG*ALCFSF
Trigger: AAATGAAAAACACAGTGCCCACCCCAGGGTAGTTGT...GAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR TCA 90 bp AGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SLFQILMLQGEKTSWKSLANVMQ*LEVLGV
Trigger: AACACCCAGAACTTCCAGTCACTGCATAACATTGGC...TAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp AGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCCATTTTAGGAGAATGTaGATAATTCTCCCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: STATTQKFRLQASSRSLCHFRRM*IILPAH
Trigger: GTGGGCGGGGAGAATTATTCACATTCTCCTAAAATG...GCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR GCA 90 bp TCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGCTCGTTCATCCCAATaGCTTTTTGGCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGYKPLPDPYASGREDKLARSSQ*LFGFPA
Trigger: TGCTGGAAAGCCAAAAAGGCATTGGGATGAACGAGC...CAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAGCTCGTTCATCCCAATaGCTTTTTGGCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TQKFRLQASSRSLCFRERARSSQ*LFGFPA
Trigger: TGCTGGAAAGCCAAAAAGGCATTGGGATGAACGAGC...TCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TATTQKFRLQASSRSLCFTLPML*SDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGT...GAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp TTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTATTGCTAGCCTGTTTTaGCCAACTTTCTATGAAGCT +
Preference number: 4 (lower is better)
Translates to: LHWWATVLPPHRSSGYKPIASLF*PTFYEA
Trigger: AGCTTCATAGAAAGTTGGGCAAAACAGGCTAGCAAT...AGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp CAGCATGTCTGTGGCTACCAGAGGGGAATACGTATGGCTGTCAGGTCAAATAGAAAACAGAAAGCGGTGTaGAAGAACTGGGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: QHVCGYQRGIRMAVRSNRKQKAV*KNWGNE
Trigger: TTCATTTCCCCAGTTCTTGCACACCGCTTTCTGTTT...TCTATTTGACCTGACAGCCATACGTATTCCCCTCTGGTAGCCACAGACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp GTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATTCCCCTCACTGTGCTaGACCACACTGCCAATGTTA +
Preference number: 4 (lower is better)
Translates to: VTSLFQILMLQGEKTSWKFPSLC*TTLPML
Trigger: TAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA...TTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp CAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGGACAGTAATGAAAACTaGCACATACTGATCACTTAC +
Preference number: 4 (lower is better)
Translates to: QGEKTSWKSLDPSPGQGKDSNEN*HILITY
Trigger: GTAAGTGATCAGTATGTGGCAGTTTTCATTACTGTC...CTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR GCA 90 bp CAGTACTTAACCATTTCCGTATCCACAGCAGCAAGGCCTCAGTGCAAAGAAATAAGATATGACACAGGGTaGACCAGCTTGCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QYLTISVSTAARPQCKEIRYDTG*TSLRFS
Trigger: TGAGAACCGCAAGCTGGTGCACCCTGTGTCATATCT...TATTTCTTTGCACTGAGGCCTTGCTGCTGTGGATACGGAAATGGTTAAGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR CCA 90 bp TACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCAGTGACTGGAAGTTCTaGGTGTTCACAGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: YKPLPDPYASGREDKLEISDWKF*VFTEPN
Trigger: GTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACT...GATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCMLCSD*KFWVFT
Trigger: TGTGAACACCCAGAACTTCCAGTCACTGCATAACAT...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CCA 90 bp CCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGCATAAGAAATTCAGCTaGGGTGACAACAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: PPHRSSGYKPLPDPYASGHKKFS*GDNRVI
Trigger: TATGACCCTGTTGTCACCCCAGCTGAATTTCTTATG...CCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp CACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAACCCCATCTGAGCTTTaGTTTGGGAGGGTCATAAGA +
Preference number: 4 (lower is better)
Translates to: HRSSGYKPLPDPYASGRETPSEL*FGRVIR
Trigger: TCTTATGACCCTCCCAAACCAAAGCTCAGATGGGGT...TTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GGTCAAAGCCTGACTTTGCAATTGCTAGCCTGTTTTGCCCAACTTTCTATGAAGGTGAGAACCTGTGGCTaGAAGCACACAGCAATACCA +
Preference number: 4 (lower is better)
Translates to: GQSLTLQLLACFAQLSMKVRTCG*KHTAIP
Trigger: TGGTATTGCTGTGTGCTTCCAGCCACAGGTTCTCAC...CTTCATAGAAAGTTGGGCAAAACAGGCTAGCAATTGCAAAGTCAGGCTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp AGGGTCATAAGAAATTCAGCTGGGGTGACAACAGGGTCATATCAGCACTGTAAAGAGTGTGAGAACCTGTaGCTGGAAGCACACAGCAAT +
Preference number: 4 (lower is better)
Translates to: RVIRNSAGVTTGSYQHCKECENL*LEAHSN
Trigger: ATTGCTGTGTGCTTCCAGCCACAGGTTCTCACACTC...TTTACAGTGCTGATATGACCCTGTTGTCACCCCAGCTGAATTTCTTATGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp AGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTCATCACTGCCTTGTaGTCATTCTGCAGGCATATG +
Preference number: 4 (lower is better)
Translates to: SSGYKPLPDPYASGREDKFITAL*SFCRHM
Trigger: CATATGCCTGCAGAATGATCACAAGGCAGTGATGAA...CTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR TCA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCCATTTTCAAGAGGTCTaGTCTACTCGTTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: DPYASGREDKLEIPRPKSHFQEV*STRSYP
Trigger: TGGATAGGAACGAGTAGATCAGACCTCTTGAAAATG...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp CACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGTGGGGAAATGAACACTaGTACCATGGAGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: HTEVQVTSLFQILMLQGEWGNEH*YHGEEK
Trigger: TTTTTCCTCTCCATGGTATCAGTGTTCATTTCCCCA...CTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp ATAATAATCACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: IIITPVPARITSAHLPTITLPML*SDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGT...GATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR GCA 90 bp TACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCTGTGCTGCACCACACTaGCAATGTTATGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: YKPLPDPYASGREDKLEICAAPH*QCYAVT
Trigger: AGTCACTGCATAACATTGGCAGTGTGGTGCAGCACA...GATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR GCA 90 bp ATAATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: IMLQPSSPFPAQRVGTSLRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...TAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR GCA 90 bp TGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTATTGCTAGCCTGTTTTaGCCAACTTTCTATGAAGCT +
Preference number: 4 (lower is better)
Translates to: WKSLDPSPGQGKMLSCYCIASLF*PTFYEA
Trigger: AGCTTCATAGAAAGTTGGGCAAAACAGGCTAGCAAT...ACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp CACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGTCAGGGGAGGGGCTTTaGAATTGGTTAGACTTTAAT +
Preference number: 4 (lower is better)
Translates to: HTEVQVTSLFQILMLQGESGEGL*NWLDFN
Trigger: ATTAAAGTCTAACCAATTGCAAAGCCCCTCCCCTGA...CTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CCA 90 bp ACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAATTAATAATTCAAAGTATTaGCAGGAATCCCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: TPVPARITSAHLPTIQGINNSKY*QESLRT
Trigger: GGTTCTCAGGGATTCCTGCCAATACTTTGAATTATT...AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp TACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCCATCAAGGCAAGCTaGTATCTGTATCCAACCACA +
Preference number: 4 (lower is better)
Translates to: YKPLPDPYASGREDKLEIPIKAS*YLYPTT
Trigger: TGTGGTTGGATACAGATACCAGCTTGCCTTGATGGG...GATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp ATAATAATCACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCATTCCACGTCAAAGTaGCTCTCCACTAACATCTCA +
Preference number: 4 (lower is better)
Translates to: IIITPVPARITSAHLPTIHSTSK*LSTNIS
Trigger: TGAGATGTTAGTGGAGAGCCACTTTGACGTGGAATG...GATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS-3UTR TCA 90 bp AGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTACATTTTCAAGAGGTCTaGTCTACTCGTTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: SLFQILMLQGEKTSWKSLHFQEV*STRSYP
Trigger: TGGATAGGAACGAGTAGATCAGACCTCTTGAAAATG...TAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp ACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGATGGGGAAATGAACACTaGTACCATGGAGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: TQKFRLQASSRSLCFRERWGNEH*YHGEEK
Trigger: TTTTTCCTCTCCATGGTATCAGTGTTCATTTCCCCA...TCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp TTTGCAATTGCTAGCCTGTTTTGCCCAACTTTCTATGAAGCTCTTCTGACCCCAGCAGCAAGGCCTCAGTaGAAAGAAATATGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FAIASLFCPTFYEALLTPAARPQ*KEICWS
Trigger: TGACCAACATATTTCTTTGCACTGAGGCCTTGCTGC...TGGGGTCAGAAGAGCTTCATAGAAAGTTGGGCAAAACAGGCTAGCAATTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp CACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAAAACAGAAAGCGGTGTaGAAGAACTGGGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: HRSSGYKPLPDPYASGREKQKAV*KNWGNE
Trigger: TTCATTTCCCCAGTTCTTGCACACCGCTTTCTGTTT...TTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GTTTTTAAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: VFKNALIQGDYTGGPQYCMLCSD*KFWVFT
Trigger: TGTGAACACCCAGAACTTCCAGTCACTGCATAACAT...GCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTTAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp TACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCGGAGAGAAGACAAGTTaGAAATCCCTAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: YKPLPDPYASGREDKLEIGEKTS*KSLDPS
Trigger: ACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC...GATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CCA 90 bp GTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTCATAAGAAATTCAGCTaGGGTGACAACAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: VQVTSLFQILMLQGEKTSHKKFS*GDNRVI
Trigger: TATGACCCTGTTGTCACCCCAGCTGAATTTCTTATG...ACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp TACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCATTGGCAGGAATCCCTaGGAACCATTTTACCATCTT +
Preference number: 4 (lower is better)
Translates to: YKPLPDPYASGREDKLEIIGRNP*EPFYHL
Trigger: AAGATGGTAAAATGGTTCTCAGGGATTCCTGCCAAT...GATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR TCA 90 bp AGGGTCATAAGAAATTCAGCTGGGGTGACAACAGGGTCATATCAGCACTGTAAAATTGGCAGGAATCCCTaGGAACCATTTTACCATCTT +
Preference number: 4 (lower is better)
Translates to: RVIRNSAGVTTGSYQHCKIGRNP*EPFYHL
Trigger: AAGATGGTAAAATGGTTCTCAGGGATTCCTGCCAAT...TTTACAGTGCTGATATGACCCTGTTGTCACCCCAGCTGAATTTCTTATGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp CAGTACTTAACCATTTCCGTATCCACAGCAGCAAGGCCTCAGTGCAAAGAAATAATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: QYLTISVSTAARPQCKEIMLCSD*KFWVFT
Trigger: TGTGAACACCCAGAACTTCCAGTCACTGCATAACAT...TATTTCTTTGCACTGAGGCCTTGCTGCTGTGGATACGGAAATGGTTAAGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR GCA 90 bp TTTGCAATTGCTAGCCTGTTTTGCCCAACTTTCTATGAAGCTCTTCTGACCCCAAGGGACAATCATCTTTaGAGAGGAATAATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FAIASLFCPTFYEALLTPRDNHL*RGIMLQ
Trigger: CTGCAACATTATTCCTCTGCAAAGATGATTGTCCCT...TGGGGTCAGAAGAGCTTCATAGAAAGTTGGGCAAAACAGGCTAGCAATTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp ACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAATAATTCAAAGTATTaGCAGGAATCCCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: TQKFRLQASSRSLCFRERNNSKY*QESLRT
Trigger: GGTTCTCAGGGATTCCTGCCAATACTTTGAATTATT...TCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CCA 90 bp GTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTGAGGGGCTTTGCAATTaGTTAGACTTTAATTTGAAT +
Preference number: 4 (lower is better)
Translates to: VQVTSLFQILMLQGEKTSEGLCN*LDFNLN
Trigger: ATTCAAATTAAAGTCTAACCAATTGCAAAGCCCCTC...ACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS TCA 90 bp CCTGCGAGGAGCCTCCGCTCTGCCTCGCTTCCTCGTCGGACATCGTaGACCCCGGGCCGCGACTCCAGAGACCCGGCTCCCGGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: PARSLRSASLPRRTS*TPGRDSRDPAPGLG
Trigger: CCCTAGCCCGGGAGCCGGGTCTCTGGAGTCGCGGCCCGGGGTTCACGATGTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTCGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
CDS GCA 90 bp ACGTCGCTGACAGTCACGACGCCGGCCTGCGAGGAGCCTCCGCTCTaGCTCGCTTCCTCGTCGGACATCGTGAACCCCGGGCCGCGACTC +
Preference number: 5 (lower is better)
Translates to: TSLTVTTPACEEPPL*LASSSDIVNPGPRL
Trigger: GAGTCGCGGCCCGGGGTTCACGATGTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGACTGTCAGCGACGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
CDS GCA 90 bp CGCCGCATCAGCTCCTGGACGTCGCTGACAGTCACGACGCCGGCCTaGGAGGAGCCTCCGCTCTGCCTCGCTTCCTCGTCGGACATCGTG +
Preference number: 5 (lower is better)
Translates to: RRISSWTSLTVTTPA*EEPPLCLASSSDIV
Trigger: CACGATGTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS GCA 90 bp TTGCGGCTCATGGCCTCTTTGTGGGCCTCAGCCATGTCCCGGGCCTaGTTCTCCTTGTCGCGAGCGTGCAGCTGGTGCAGGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRLMASLWASAMSRA*FSLSRACSWCRASS
Trigger: GGAGGAGGCCCTGCACCAGCTGCACGCTCGCGACAAGGAGAAGCAGGCCCGGGACATGGCTGAGGCCCACAAAGAGGCCATGAGCCGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000541212.6
ENST00000543699.5
ENST00000544724.5
CDS TCA 90 bp CATCATCCACTTGCAGACCCGCGATGCTGGCTGGGGAGCCGGGGCTaGTGCTGTTCACTTTGGCGAAGGCCCGTGGAGGGCCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: HHPLADPRCWLGSRG*CCSLWRRPVEGPGS
Trigger: AGAGCCAGGGCCCTCCACGGGCCTTCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGGTCTGCAAGTGGATGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
ENST00000544724.5
CDS CCA 90 bp GCCTTGATCTGCGCTTCTATCTCCTCCTTGCGCCGCATCAGCTCCTaGACGTCGCTGACAGTCACGACGCCGGCCTGCGAGGAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: ALICASISSLRRISS*TSLTVTTPACEEPP
Trigger: CGGAGGCTCCTCGCAGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGCGCAGATCAAGGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS CCA 90 bp GGCATGGACTTGAGTGGCCAACCCCTGGATTACCGCGATGCTGGCTaGGGAGCCGGGGCTGATGCTGTTCACTTTGGCGAAGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: GMDLSGQPLDYRDAG*GAGADAVHFGEGPW
Trigger: CCACGGGCCTTCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGTAATCCAGGGGTTGGCCACTCAAGTCCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS TCA 90 bp TATGATGTTGTGCCTGGCGGTGCGGACTTGGTACAGGTCCACGTCTaGCCGGGGGTAGCCCTCACAGTCCACCAGCGGCTCGTTCATCCC +
Preference number: 5 (lower is better)
Translates to: YDVVPGGADLVQVHV*PGVALTVHQRLVHP
Trigger: GGGATGAACGAGCCGCTGGTGGACTGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTACCAAGTCCGCACCGCCAGGCACAACATCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS TCA 90 bp CTGTTCACTTTGGCGAAGGCCCGTGGAGGGCCCTGGCTCTCACTCTaGCCCAGTTTGCGGCTCATGGCCTCTTTGTGGGCCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: LFTLAKARGGPWLSL*PSLRLMASLWASAM
Trigger: CATGGCTGAGGCCCACAAAGAGGCCATGAGCCGCAAACTGGGTCAGAGTGAGAGCCAGGGCCCTCCACGGGCCTTCGCCAAAGTGAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000541212.6
ENST00000543699.5
ENST00000544724.5
CDS GCA 90 bp AGTCCAGGAGAGGGAGTCCACAGGGAGGTGGCCAAAGGGCACCCCTaGTACAGGGCTCTTGCCAATTGGCTGGGTTTGGGAGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: SPGEGVHREVAKGHP*YRALANWLGLGGRP
Trigger: GGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCCCTGTGGACTCCCTCTCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 90 bp TCACACCCTCCTTCCCACAGGTGGCTGACACCTGGCTGCTGGCCCTaGAAGCTAGAGGGGAGTGAAAAGCCCAGACAGCACCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SHPPSHRWLTPGCWP*KLEGSEKPRQHPAV
Trigger: CACAGCTGGGTGCTGTCTGGGCTTTTCACTCCCCTCTAGCTTCCAGGGCCAGCAGCCAGGTGTCAGCCACCTGTGGGAAGGAGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS GCA 90 bp TCCACTCCTTCACACCCTCCTTCCCACAGGTGGCTGACACCTGGCTaGTGGCCCTGGAAGCTAGAGGGGAGTGAAAAGCCCAGACAGCAC +
Preference number: 5 (lower is better)
Translates to: STPSHPPSHRWLTPG*WPWKLEGSEKPRQH
Trigger: GTGCTGTCTGGGCTTTTCACTCCCCTCTAGCTTCCAGGGCCAGCAGCCAGGTGTCAGCCACCTGTGGGAAGGAGGGTGTGAAGGAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS CCA 90 bp ACTCCTTCACACCCTCCTTCCCACAGGTGGCTGACACCTGGCTGCTaGCCCTGGAAGCTAGAGGGGAGTGAAAAGCCCAGACAGCACCCA +
Preference number: 5 (lower is better)
Translates to: TPSHPPSHRWLTPGC*PWKLEGSEKPRQHP
Trigger: TGGGTGCTGTCTGGGCTTTTCACTCCCCTCTAGCTTCCAGGGCCAGCAGCCAGGTGTCAGCCACCTGTGGGAAGGAGGGTGTGAAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS GCA 90 bp TGCAGCATAATCCTGTGGTTGGCGAGAGGGTGGGGAACGTGGCACTaGACTCTCAGGGCAGCCAGGGTGCTGACCTCAGTACCATCTTCC +
Preference number: 5 (lower is better)
Translates to: CSIILWLARGWGTWH*TLRAARVLTSVPSS
Trigger: GGAAGATGGTACTGAGGTCAGCACCCTGGCTGCCCTGAGAGTGCAGTGCCACGTTCCCCACCCTCTCGCCAACCACAGGATTATGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361485.5
CDS CCA 90 bp CACCTCATGCAGGAAGGGGCAGTGGGTAACGGGGCCACCTCCTCCTaGGGTTCCTTTGAGGGCAGCTCTAGTAAAGATGACCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: HLMQEGAVGNGATSS*GSFEGSSSKDDQVC
Trigger: GCAGACCTGGTCATCTTTACTAGAGCTGCCCTCAAAGGAACCCCAGGAGGAGGTGGCCCCGTTACCCACTGCCCCTTCCTGCATGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS-3UTR CAA 90 bp GCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAACGGGCCTGCTTCTCCTaGTCGCGAGCGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ALIQGDYTGGPQYCHHTERACFS*SRACSW
Trigger: CCAGCTGCACGCTCGCGACAAGGAGAAGCAGGCCCG...TTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp AATCACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGCGGGCCTGCTTCTCCTaGTCGCGAGCGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NHTSTCQNNFRPLAHNPGRACFS*SRACSW
Trigger: CCAGCTGCACGCTCGCGACAAGGAGAAGCAGGCCCG...CCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS GCA 90 bp GCGAGCGTGCAGCTGGTGCAGGGCCTCCTCCACCTGCTTCATCACTaGCTTGTGATCATTCTGCAGGCATATGATGTTGTGCCTGGCGGT +
Preference number: 5 (lower is better)
Translates to: ASVQLVQGLLHLLHH*LVIILQAYDVVPGG
Trigger: ACCGCCAGGCACAACATCATATGCCTGCAGAATGATCACAAGGCAGTGATGAAGCAGGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000541212.6
ENST00000543699.5
CDS GCA 90 bp GCGAGCGTGCAGCTGGTGCAGGGCCTCCTCCACCTGCTTCATCACTaGCTTGTGATCATTCTGCAGGCCTGGGATGAGAACCACACATCA +
Preference number: 5 (lower is better)
Translates to: ASVQLVQGLLHLLHH*LVIILQAWDENHTS
Trigger: TGATGTGTGGTTCTCATCCCAGGCCTGCAGAATGATCACAAGGCAGTGATGAAGCAGGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS-3UTR CAA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCCGGGCCTGCTTCTCCTaGTCGCGAGCGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ITLVGHSTATTQKFRLQARACFS*SRACSW
Trigger: CCAGCTGCACGCTCGCGACAAGGAGAAGCAGGCCCG...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp GGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGCGGCTCATGGCCTCTTaGTGGGCCTCAGCCATGTCC +
Preference number: 5 (lower is better)
Translates to: GGPQYCHHTEVQVTSLFQRLMAS*WASAMS
Trigger: GGACATGGCTGAGGCCCACAAAGAGGCCATGAGCCG...CTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp GACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAGCTTCTATCTCCTCCTaGCGCCGCATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: DPSPGQGKMLSCYCSPGTASISS*RRISSW
Trigger: CCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGC...TGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CAA 90 bp ACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTCGGGCCTGCTTCTCCTaGTCGCGAGCGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TSWKSLDPSPGQGKMLSCRACFS*SRACSW
Trigger: CCAGCTGCACGCTCGCGACAAGGAGAAGCAGGCCCG...ACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp ATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCCGGCTCATGGCCTCTTaGTGGGCCTCAGCCATGTCC +
Preference number: 5 (lower is better)
Translates to: IPRPKSRAREDAFLLLFPRLMAS*WASAMS
Trigger: GGACATGGCTGAGGCCCACAAAGAGGCCATGAGCCG...GGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp TGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCGGCTCATGGCCTCTTaGTGGGCCTCAGCCATGTCC +
Preference number: 5 (lower is better)
Translates to: CHIQGLPLTVLHHTANVMRLMAS*WASAMS
Trigger: GGACATGGCTGAGGCCCACAAAGAGGCCATGAGCCG...CATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CAA 90 bp TCACTGTCACATTCAGGGGCTTCCCCTCACTGTGCTGCACCACACTGCCAATGTCTGATGCTGTTCACTTaGGCGAAGGCCCGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: SLSHSGASPHCAAPHCQCLMLFT*AKARGG
Trigger: CCCTCCACGGGCCTTCGCCAAAGTGAACAGCATCAG...ACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAAGCCCCTGAATGTGACAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS GCA 90 bp CACTCGCCTCCCTCCCTACCTGCTGCAAGAACTAACGAGCTGACCTaGAGAGTACTTAGCACATGCCACGCGCATACACAGCATAGTGGG +
Preference number: 5 (lower is better)
Translates to: HSPPSLPAARTNELT*RVLSTCHAHTQHSG
Trigger: CCCACTATGCTGTGTATGCGCGTGGCATGTGCTAAGTACTCTGCAGGTCAGCTCGTTAGTTCTTGCAGCAGGTAGGGAGGGAGGCGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS GCA 90 bp ATCTGCAGGCCACGCCAGCACAGCAGCTGGTATTTTGATACCTTGTaGCTGTCAGTGGGATTGCGGTACTACCTGACCTGCCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: ICRPRQHSSWYFDTL*LSVGLRYYLTCLLC
Trigger: GCAGAGGAGGCAGGTCAGGTAGTACCGCAATCCCACTGACAGGCACAAGGTATCAAAATACCAGCTGCTGTGCTGGCGTGGCCTGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS GCA 90 bp AGTCCACAGGGAGGTGGCCAAAGGGCACCCCTGCTACAGGGCTCTTaGCAATTGGCTGGGTTTGGGAGGAAGACCCAATGCTACAAAATC +
Preference number: 5 (lower is better)
Translates to: SPQGGGQRAPLLQGS*QLAGFGRKTQCYKI
Trigger: GATTTTGTAGCATTGGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCCCTGTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS-3UTR CAA 90 bp TGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGCTTCTATCTCCTCCTaGCGCCGCATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WWATVLPPHRSSGYKPLPASISS*RRISSW
Trigger: CCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGC...TGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp CTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTCGGCTCATGGCCTCTTaGTGGGCCTCAGCCATGTCC +
Preference number: 5 (lower is better)
Translates to: LNPGRLHWWATVLPPHRSRLMAS*WASAMS
Trigger: GGACATGGCTGAGGCCCACAAAGAGGCCATGAGCCG...ACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS TCA 90 bp CAGGGGCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTTCACAGAGCCGAACTCCACAATCTC +
Preference number: 5 (lower is better)
Translates to: QGPLTVLHHTANVMQ*LEVLGVHRAELHNL
Trigger: GAGATTGTGGAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS TCA 90 bp CAGGGCCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCAGTaGCTGGAAGTTCTGGGTGTTCACAGAGCCGAACTCCACAATCTC +
Preference number: 5 (lower is better)
Translates to: QGPLTVLHHTANVMQ*LEVLGVHRAELHNL
Trigger: GAGATTGTGGAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS TCA 90 bp AGGAGCACTCGCCTCCCTCCCTACCTGCTGCAAGAACTAACGAGCTaGCCTGCAGAGTACTTAGCACATGCCACGCGCATACACAGCATA +
Preference number: 5 (lower is better)
Translates to: RSTRLPPYLLQELTS*PAEYLAHATRIHSI
Trigger: TATGCTGTGTATGCGCGTGGCATGTGCTAAGTACTCTGCAGGTCAGCTCGTTAGTTCTTGCAGCAGGTAGGGAGGGAGGCGAGTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS TCA 90 bp CATCATCCACTTGCAGACCGCTTTCCAGCACGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCTCCTTGCGCCGCATCAGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: HHPLADRFPARHSWP*SALLSPPCAASAPG
Trigger: TCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGCGCAGATCAAGGCCAACTATGACGTGCTGGAAAGCGGTCTGCAAGTGGATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542602.1
CDS TCA 90 bp CACCATGGCAATCTGCAGGCCACGCCAGCACAGCAGCTGGTATTTTaGTACCTTGTGCCTGTCAGTGGGATTGCGGTACTACCTGACCTG +
Preference number: 5 (lower is better)
Translates to: HHGNLQATPAQQLVF*YLVPVSGIAVLPDL
Trigger: CAGGTCAGGTAGTACCGCAATCCCACTGACAGGCACAAGGTATCAAAATACCAGCTGCTGTGCTGGCGTGGCCTGCAGATTGCCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 90 bp GTAAAGATTTACATTTGCAGCATAATCCTGTGGTTGGCGAGAGGGTaGGGAACGTGGCACTGCACTCTCAGGGCAGCCAGGGTGCTGACC +
Preference number: 5 (lower is better)
Translates to: VKIYICSIILWLARG*GTWHCTLRAARVLT
Trigger: GGTCAGCACCCTGGCTGCCCTGAGAGTGCAGTGCCACGTTCCCCACCCTCTCGCCAACCACAGGATTATGCTGCAAATGTAAATCTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361485.5
CDS-3UTR CAA 90 bp AGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGCGGGCCTGCTTCTCCTaGTCGCGAGCGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSGYKPLPDPYASGREDKRACFS*SRACSW
Trigger: CCAGCTGCACGCTCGCGACAAGGAGAAGCAGGCCCG...CTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp CTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTCTGATGCTGTTCACTTaGGCGAAGGCCCGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LNPGRLHWWATVLPPHRSLMLFT*AKARGG
Trigger: CCCTCCACGGGCCTTCGCCAAAGTGAACAGCATCAG...ACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp AGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACCCCCTGGGCATGGACTaGAGTGGCCAACCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SWKSLDPSPGQGKMLSCYPLGMD*SGQPLD
Trigger: ATCCAGGGGTTGGCCACTCAAGTCCATGCCCAGGGG...GTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CAA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCACAGGGTGCACCAGCTaGCGGTTCTCAGCACAAAGC +
Preference number: 5 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFTGCTS*RFSAQS
Trigger: GCTTTGTGCTGAGAACCGCAAGCTGGTGCACCCTGT...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS GCA 90 bp ACATTCAGGGGCCCCTCACTGTGCTGCACCACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGGGTGTTCACAGAGCCGAACTCCACA +
Preference number: 5 (lower is better)
Translates to: TFRGPSLCCTTLPML*SDWKFWVFTEPNST
Trigger: TGTGGAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGCCCCTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS GCA 90 bp GGATCACTGTCACATTCAGGGGCCCCTCACTGTGCTGCACCACACTaGCAATGTTATGCAGTGACTGGAAGTTCTGGGTGTTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: GSLSHSGAPHCAAPH*QCYAVTGSSGCSQS
Trigger: GCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGCCCCTGAATGTGACAGTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS GCA 90 bp ATAGAGACAGAAAGTAGGATGGTGGGTGCCAGGGCCCCCTCACTGTaGTGCACCACACTGCCAATGTTATGCAGTGACTGGAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: IETESRMVGARAPSL*CTTLPMLCSDWKFW
Trigger: CCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGGCCCTGGCACCCACCATCCTACTTTCTGTCTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS GCA 90 bp TTGTGCCTGTCAGTGGGATTGCGGTACTACCTGACCTGCCTCCTCTaGCACTGTCACTTTGGAGCAAAGGCAAGACCCTCAGTCATGAAG +
Preference number: 5 (lower is better)
Translates to: LCLSVGLRYYLTCLL*HCHFGAKARPSVMK
Trigger: CTTCATGACTGAGGGTCTTGCCTTTGCTCCAAAGTGACAGTGGCAGAGGAGGCAGGTCAGGTAGTACCGCAATCCCACTGACAGGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS GCA 90 bp TCCTGGGGTTCCTTTGAGGGCAGCTCTAGTAAAGATGACCAGGTCTaGCCAATGTCTGAGAGCTGGCAGTTACCAGACACTGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SWGSFEGSSSKDDQV*PMSESWQLPDTVKA
Trigger: GGCCTTCACAGTGTCTGGTAACTGCCAGCTCTCAGACATTGGGCAGACCTGGTCATCTTTACTAGAGCTGCCCTCAAAGGAACCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS-3UTR CAA 90 bp AAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCGCTTCTATCTCCTCCTaGCGCCGCATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KSLDPSPGQGKMLSCYCSASISS*RRISSW
Trigger: CCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGC...GGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CAA 90 bp GAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCGCTTCTATCTCCTCCTaGCGCCGCATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EIPRPKSRAREDAFLLLFASISS*RRISSW
Trigger: CCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGC...GAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CAA 90 bp GATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCTGCAGGCATATGATGTaGTGCCTGGCGGTGCGGACT +
Preference number: 5 (lower is better)
Translates to: DYTGGPQYCHHTEVQVTSCRHMM*CLAVRT
Trigger: AGTCCGCACCGCCAGGCACAACATCATATGCCTGCA...GCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACGGCTCATGGCCTCTTaGTGGGCCTCAGCCATGTCC +
Preference number: 5 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLRLMAS*WASAMS
Trigger: GGACATGGCTGAGGCCCACAAAGAGGCCATGAGCCG...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp GACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGCGAAGTGAAAGGAGCTaGCTGCCCTCTGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: DKLEIPRPKSRAREDAFLRSERS*LPSGGF
Trigger: GAACCCACCAGAGGGCAGCAAGCTCCTTTCACTTCG...CAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp ACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGGGAATTCCCAAGGAACACAGGGCTaGCCTGGCAGAACTGCCAAA +
Preference number: 5 (lower is better)
Translates to: TSTCQNNFRPLAHNPGNSQGTQG*PGRTAK
Trigger: TTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTTG...GGAATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp ATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCAATCTCATCATCCACTaGCAGACCCGTGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: MLQPSSPFPAQRVGTSLSNLIIH*QTRVPW
Trigger: CCAGGGGACACGGGTCTGCAAGTGGATGATGAGATT...GCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CAA 90 bp GGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCAATCTCATCATCCACTaGCAGACCCGTGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: GPQYCHHTEVQVTSLFQINLIIH*QTRVPW
Trigger: CCAGGGGACACGGGTCTGCAAGTGGATGATGAGATT...GATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CAA 90 bp CAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCACCGGGCACCGCGTGTaGCAGACAATTCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: QASSRSLCFRERRQVGNPTGHRV*QTIPAG
Trigger: GCCAGCTGGAATTGTCTGCAACACGCGGTGCCCGGT...GGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541212.6
CDS TCA 90 bp TCATCCCAATGCCTTTTTGGCTTTCCAGCACGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCTCCTTGCGCCGCATCAGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SSQCLFGFPARHSWP*SALLSPPCAASAPG
Trigger: TCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGCGCAGATCAAGGCCAACTATGACGTGCTGGAAAGCCAAAAAGGCATTGGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS CCA 90 bp GGCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACAGAGCCGAACTCCACAATCTCATCA +
Preference number: 5 (lower is better)
Translates to: GPSLCCTTLPMLCSD*KFWVFTEPNSTISS
Trigger: TGATGAGATTGTGGAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS CCA 90 bp GCCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACAGAGCCGAACTCCACAATCTCATCA +
Preference number: 5 (lower is better)
Translates to: APSLCCTTLPMLCSD*KFWVFTEPNSTISS
Trigger: TGATGAGATTGTGGAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS CCA 90 bp AGGGAGGTGGCCAAAGGGCACCCCTGCTACAGGGCTCTTGCCAATTaGCTGGGTTTGGGAGGAAGACCCAATGCTACAAAATCTTTGATT +
Preference number: 5 (lower is better)
Translates to: REVAKGHPCYRALAN*LGLGGRPNATKSLI
Trigger: AATCAAAGATTTTGTAGCATTGGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS-3UTR CAA 90 bp GAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTGCAGGCATATGATGTaGTGCCTGGCGGTGCGGACT +
Preference number: 5 (lower is better)
Translates to: EKTSWKSLDPSPGQGKMLCRHMM*CLAVRT
Trigger: AGTCCGCACCGCCAGGCACAACATCATATGCCTGCA...AAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp CTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCACTGATGCTGTTCACTTaGGCGAAGGCCCGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LPPHRSSGYKPLPDPYASLMLFT*AKARGG
Trigger: CCCTCCACGGGCCTTCGCCAAAGTGAACAGCATCAG...TGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp TTTAAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCTGATGCTGTTCACTTaGGCGAAGGCCCGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: FKNALIQGDYTGGPQYCHLMLFT*AKARGG
Trigger: CCCTCCACGGGCCTTCGCCAAAGTGAACAGCATCAG...GTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp GGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 5 (lower is better)
Translates to: GGPQYCHHTEVQVTSLFQGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...CTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp CCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGATAACTTCCGCCCACTaGCCCACAATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: PRPKSRAREDAFLLLFPRITSAH*PTIQGI
Trigger: AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTAT...CCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp AGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTCGAAGTGAAAGGAGCTaGCTGCCCTCTGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: REDKLEIPRPKSRAREDARSERS*LPSGGF
Trigger: GAACCCACCAGAGGGCAGCAAGCTCCTTTCACTTCG...AGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp AGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACCCCCTGGGCATGGACTaGAGTGGCCAACCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: RSSGYKPLPDPYASGREDPLGMD*SGQPLD
Trigger: ATCCAGGGGTTGGCCACTCAAGTCCATGCCCAGGGG...GTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS-3UTR CAA 90 bp CACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGTGCAGGCATATGATGTaGTGCCTGGCGGTGCGGACT +
Preference number: 5 (lower is better)
Translates to: HTEVQVTSLFQILMLQGECRHMM*CLAVRT
Trigger: AGTCCGCACCGCCAGGCACAACATCATATGCCTGCA...CTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTATGCAGGCATATGATGTaGTGCCTGGCGGTGCGGACT +
Preference number: 5 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLCRHMM*CLAVRT
Trigger: AGTCCGCACCGCCAGGCACAACATCATATGCCTGCA...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp ACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGACTGATGCTGTTCACTTaGGCGAAGGCCCGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: TQKFRLQASSRSLCFRERLMLFT*AKARGG
Trigger: CCCTCCACGGGCCTTCGCCAAAGTGAACAGCATCAG...TCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp CCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAATCTCATCATCCACTaGCAGACCCGCGATGCTGGC +
Preference number: 5 (lower is better)
Translates to: PPHRSSGYKPLPDPYASGNLIIH*QTRDAG
Trigger: GCCAGCATCGCGGGTCTGCAAGTGGATGATGAGATT...CCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR CAA 90 bp AAGGAGCTTGCTGCCCTCTGGTGGGTTCCTAAAGAGGAAGCTGACAGGACACCATGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: KELAALWWVPKEEADRTPCRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...TGGTGTCCTGTCAGCTTCCTCTTTAGGAACCCACCAGAGGGCAGCAAGCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp CCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAATGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 5 (lower is better)
Translates to: PKSRAREDAFLLLFPRDNGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...ATTGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CAA 90 bp CACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 5 (lower is better)
Translates to: HWWATVLPPHRSSGYKPLGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...AAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp ACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 5 (lower is better)
Translates to: TGGPQYCHHTEVQVTSLFGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...GAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp ATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCATAACTTCCGCCCACTaGCCCACAATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: IPRPKSRAREDAFLLLFPITSAH*PTIQGI
Trigger: AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTAT...GGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS GCA 90 bp AGGTCCACAGCATCCCTAGACTCTGCAATGCCTGGCACAGGGAAGTaGTCAATACACAGCTGTTGGGGAATGGAACGAACGACTATTTAC +
Preference number: 5 (lower is better)
Translates to: RSTASLDSAMPGTGK*SIHSCWGMERTTIY
Trigger: GTAAATAGTCGTTCGTTCCATTCCCCAACAGCTGTGTATTGAGCACTTCCCTGTGCCAGGCATTGCAGAGTCTAGGGATGCTGTGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 90 bp TTCCCCTCACTGTGCTGCACCACACTGCCAATGTTATGCAGTGACTaGAAGTTCTGGGTGTTCACAGAGCCGAACTCCACAATCTCATCA +
Preference number: 5 (lower is better)
Translates to: FPSLCCTTLPMLCSD*KFWVFTEPNSTISS
Trigger: TGATGAGATTGTGGAGTTCGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000535293.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
ENST00000544254.1
ENST00000544724.5
CDS-3UTR CAA 90 bp TTTGCAATTGCTAGCCTGTTTTGCCCAACTTTCTATGAAGCTCTTCTGACCCCAGCTTCTATCTCCTCCTaGCGCCGCATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FAIASLFCPTFYEALLTPASISS*RRISSW
Trigger: CCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGC...TGGGGTCAGAAGAGCTTCATAGAAAGTTGGGCAAAACAGGCTAGCAATTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp GGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAATGCAGGCATATGATGTaGTGCCTGGCGGTGCGGACT +
Preference number: 5 (lower is better)
Translates to: GYKPLPDPYASGREDKLECRHMM*CLAVRT
Trigger: AGTCCGCACCGCCAGGCACAACATCATATGCCTGCA...TTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 5 (lower is better)
Translates to: ITLVGHSTATTQKFRLQAGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp AGAACCTGTGGCTGGAAGCACACAGCAATACCAATCCCATCAAGGCAAGCTGGTATAACTTCCGCCCACTaGCCCACAATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: RTCGWKHTAIPIPSRQAGITSAH*PTIQGI
Trigger: AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTAT...ACCAGCTTGCCTTGATGGGATTGGTATTGCTGTGTGCTTCCAGCCACAGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp ACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCCAAGGAACACAGGGCTaGCCTGGCAGAACTGCCAAA +
Preference number: 5 (lower is better)
Translates to: TATTQKFRLQASSRSLCFQGTQG*PGRTAK
Trigger: TTTGGCAGTTCTGCCAGGCAAGCCCTGTGTTCCTTG...GAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp GGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCCCAATAGGAAGGCTTaGGAATTGAGTGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: GPQYCHHTEVQVTSLFQIPNRKA*ELSVRT
Trigger: GGTTCTCACACTCAATTCCAAAGCCTTCCTATTGGG...GATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp AGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGCAGACCATATGATGTaGTGCCTGGCGGTGCGGACT +
Preference number: 5 (lower is better)
Translates to: SLFQILMLQGEKTSWKSLADHMM*CLAVRT
Trigger: AGTCCGCACCGCCAGGCACAACATCATATGGTCTGC...TAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540962.5
CDS CCA 90 bp GAACAAGTGGAGACATGCACTTGGGAGGCAGACTTACATAATACATaGTCACTTTCACTAGAAAAGCCCTCCCCCAGTGAGGTCCACAGC +
Preference number: 5 (lower is better)
Translates to: EQVETCTWEADLHNT*SLSLEKPSPSEVHS
Trigger: GCTGTGGACCTCACTGGGGGAGGGCTTTTCTAGTGAAAGTGACCATGTATTATGTAAGTCTGCCTCCCAAGTGCATGTCTCCACTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS-3UTR CAA 90 bp CACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAAATCTCATCATCCACTaGCAGACCCGCGATGCTGGC +
Preference number: 5 (lower is better)
Translates to: HRSSGYKPLPDPYASGRENLIIH*QTRDAG
Trigger: GCCAGCATCGCGGGTCTGCAAGTGGATGATGAGATT...TTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR CAA 90 bp GGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAAATCTCATCATCCACTaGCAGACCCGCGATGCTGGC +
Preference number: 5 (lower is better)
Translates to: GYKPLPDPYASGREDKLENLIIH*QTRDAG
Trigger: GCCAGCATCGCGGGTCTGCAAGTGGATGATGAGATT...TTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR CAA 90 bp AAGAATGCCTTAATCCAGGGAGATTACACTGGTGGGCCACAGTACTGCCACCACTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: KNALIQGDYTGGPQYCHHCRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...GTGGTGGCAGTACTGTGGCCCACCAGTGTAATCTCCCTGGATTAAGGCATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp GGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: GEKTSWKSLDPSPGQGKMCRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...CATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CAA 90 bp TATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAATAACTTCCGCCCACTaGCCCACAATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: YASGREDKLEIPRPKSRAITSAH*PTIQGI
Trigger: AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTAT...TGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS CCA 90 bp TTGCCTATCAAATTGGTAAAGATTTACATTTGCAGCATAATCCTGTaGTTGGCGAGAGGGTGGGGAACGTGGCACTGCACTCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LPIKLVKIYICSIIL*LARGWGTWHCTLRA
Trigger: TGCCCTGAGAGTGCAGTGCCACGTTCCCCACCCTCTCGCCAACCACAGGATTATGCTGCAAATGTAAATCTTTACCAATTTGATAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361485.5
CDS-3UTR CAA 90 bp CCACCACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: PPHRSSGYKPLPDPYASGCRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...CCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp GAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: EKTSWKSLDPSPGQGKMLCRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...AAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CAA 90 bp CTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGCAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: LQGEKTSWKSLDPSPGQGQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...CCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CAA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTAGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 5 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CAA 90 bp TATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCAGGGCACATCCCAATGCCTTTTaGCTGGAGGAAAGAAACGTG +
Preference number: 5 (lower is better)
Translates to: YASGREDKLEIPRPKSRAHPNAF*LEERNV
Trigger: CACGTTTCTTTCCTCCAGCAAAAAGGCATTGGGATG...TGCCCTGGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CAA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTAAATCTCATCATCCACTaGCAGACCGCTTTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLNLIIH*QTAFQH
Trigger: GTGCTGGAAAGCGGTCTGCAAGTGGATGATGAGATT...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542602.1
CDS-3UTR CAA 90 bp CACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: HTEVQVTSLFQILMLQGECRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...CTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp GTTACTGTTCCCCAGGGACAATCATCTTTGCAGAGGAATAATGTTGCAGCCCAGTGCAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: VTVPQGQSSLQRNNVAAQCRGIM*QPSSPF
Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTGCA...CTGGGCTGCAACATTATTCCTCTGCAAAGATGATTGTCCCTGGGGAACAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CAA 90 bp GTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTGGGAGAGAAGACAAGTaGGAAATCCCTAGACCCAAG +
Preference number: 5 (lower is better)
Translates to: VQVTSLFQILMLQGEKTSGREDK*EIPRPK
Trigger: CTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCC...ACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp ACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAATAACTTCCGCCCACTaGCCCACAATCCAGGGAATT +
Preference number: 5 (lower is better)
Translates to: TQKFRLQASSRSLCFRERITSAH*PTIQGI
Trigger: AATTCCCTGGATTGTGGGCAAGTGGGCGGAAGTTAT...TCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp AAGTTGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACCCAATAGGAAGGCTTaGGAATTGAGTGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: KLEIPRPKSRAREDAFLLPNRKA*ELSVRT
Trigger: GGTTCTCACACTCAATTCCAAAGCCTTCCTATTGGG...TAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp AGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACTTTAAACAGCAAACATaGGTAAACACAGCATGTCTG +
Preference number: 5 (lower is better)
Translates to: RPKSRAREDAFLLLFPRDFKQQT*VNTACL
Trigger: CAGACATGCTGTGTTTACCAATGTTTGCTGTTTAAA...GTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS-3UTR CAA 90 bp AGCAGTCCTTTTCCTGCCCAGCGTGTTGGAACAAGTCTAAGCTGGTGTTTTTCCCAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: SSPFPAQRVGTSLSWCFSQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...GGAAAAACACCAGCTTAGACTTGTTCCAACACGCTGGGCAGGAAAAGGACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000543699.5
CDS-3UTR CAA 90 bp ATAATCACACCAGTACCTGCCAGAATAACTTCCGCCCACTTGCCCACAATCCAGCAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: IITPVPARITSAHLPTIQQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...CTGGATTGTGGGCAAGTGGGCGGAAGTTATTCTGGCAGGTACTGGTGTGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
CDS-3UTR CAA 90 bp TGGAAATCCCTAGACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTCAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: WKSLDPSPGQGKMLSCYCQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...ACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGTCTAGGGATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS-3UTR CAA 90 bp ACCCAAGTCCAGGGCAAGGGAAGATGCTTTCCTGTTACTGTTCCCCAGGGACAATGGTTAGACTTTAATTaGAATCTCAACTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: TQVQGKGRCFPVTVPQGQWLDFN*NLNSAM
Trigger: CATGGCAGAGTTGAGATTCAAATTAAAGTCTAACCA...TTGTCCCTGGGGAACAGTAACAGGAAAGCATCTTCCCTTGCCCTGGACTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CAA 90 bp ATTACACTGGTGGGCCACAGTACTGCCACCACACAGAAGTTCAGGTTACAAGCCAGCTGTGGCAGGGCTTaGATTCTTCTGAAAATAAAA +
Preference number: 5 (lower is better)
Translates to: ITLVGHSTATTQKFRLQASCGRA*ILLKIK
Trigger: TTTTATTTTCAGAAGAATCAAAGCCCTGCCACAGCT...GGCTTGTAACCTGAACTTCTGTGTGGTGGCAGTACTGTGGCCCACCAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS GCA 90 bp GGAGCAGATGTGGGAAAAGAACCCAGATCTGAACAAGTGGAGACATaGACTTGGGAGGCAGACTTACATAATACATGGTCACTTTCACTA +
Preference number: 5 (lower is better)
Translates to: GADVGKEPRSEQVET*TWEADLHNTWSLSL
Trigger: TAGTGAAAGTGACCATGTATTATGTAAGTCTGCCTCCCAAGTGCATGTCTCCACTTGTTCAGATCTGGGTTCTTTTCCCACATCTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS GCA 90 bp CTGGAGAGGGAAGGAAAAATGGAAAATCAGGCTAGAGGTTCAGTGTaGTCCTGGTGGTCTCTAACCTTCAATACCCAATTTAATGCCAAG +
Preference number: 5 (lower is better)
Translates to: LEREGKMENQARGSV*SWWSLTFNTQFNAK
Trigger: CTTGGCATTAAATTGGGTATTGAAGGTTAGAGACCACCAGGAGCACACTGAACCTCTAGCCTGATTTTCCATTTTTCCTTCCCTCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS CCA 90 bp GAAGGAAAAATGGAAAATCAGGCTAGAGGTTCAGTGTGCTCCTGGTaGTCTCTAACCTTCAATACCCAATTTAATGCCAAGGTCACGAGC +
Preference number: 5 (lower is better)
Translates to: EGKMENQARGSVCSW*SLTFNTQFNAKVTS
Trigger: GCTCGTGACCTTGGCATTAAATTGGGTATTGAAGGTTAGAGACCACCAGGAGCACACTGAACCTCTAGCCTGATTTTCCATTTTTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS CCA 90 bp AGGGAAGGAAAAATGGAAAATCAGGCTAGAGGTTCAGTGTGCTCCTaGTGGTCTCTAACCTTCAATACCCAATTTAATGCCAAGGTCACG +
Preference number: 5 (lower is better)
Translates to: REGKMENQARGSVCS*WSLTFNTQFNAKVT
Trigger: CGTGACCTTGGCATTAAATTGGGTATTGAAGGTTAGAGACCACCAGGAGCACACTGAACCTCTAGCCTGATTTTCCATTTTTCCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS-3UTR CAA 90 bp GATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCAAGTCCCAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: DPYASGREDKLEIPRPKSQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...GGACTTGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS TCA 90 bp TCTGAAGTCATAATAAAGGTGACAGTAATGAAAACTGCCACATACTaGTCACTTACACCAGGGGCTCTACTCATGCCCTCACAACTACCC +
Preference number: 5 (lower is better)
Translates to: SEVIIKVTVMKTATY*SLTPGALLMPSQLP
Trigger: GGGTAGTTGTGAGGGCATGAGTAGAGCCCCTGGTGTAAGTGATCAGTATGTGGCAGTTTTCATTACTGTCACCTTTATTATGACTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS-3UTR CAA 90 bp ACACAGAAGTTCAGGTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGACAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: TQKFRLQASSRSLCFRERQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...TCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAACCTGAACTTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS CCA 90 bp GATGTGGGAAAAGAACCCAGATCTGAACAAGTGGAGACATGCACTTaGGAGGCAGACTTACATAATACATGGTCACTTTCACTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: DVGKEPRSEQVETCT*EADLHNTWSLSLEK
Trigger: CTTTTCTAGTGAAAGTGACCATGTATTATGTAAGTCTGCCTCCCAAGTGCATGTCTCCACTTGTTCAGATCTGGGTTCTTTTCCCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS-3UTR CAA 90 bp GTTACAAGCCTCTTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAACAGGGACAATCATCTTaGCAGAGGAATAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: VTSLFQILMLQGEKTSWKQGQSS*QRNNVA
Trigger: TGCAACATTATTCCTCTGCAAAGATGATTGTCCCTG...TTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAAGAGGCTTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS-3UTR CAA 90 bp TTCCAGATCCTTATGCTTCAGGGAGAGAAGACAAGTTGGAAATCCCTAGACCCATTTAAACAGCAAACATaGGTAAACACAGCATGTCTG +
Preference number: 5 (lower is better)
Translates to: FQILMLQGEKTSWKSLDPFKQQT*VNTACL
Trigger: CAGACATGCTGTGTTTACCAATGTTTGCTGTTTAAA...TGGGTCTAGGGATTTCCAACTTGTCTTCTCTCCCTGAAGCATAAGGATCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261817.6
ENST00000541212.6
CDS TCA 72 bp AGCCTCCGCTCTGCCTCGCTTCCTCGTCGGACATCGTaGACCCCGGGCCGCGACTCCAGAGACCCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: SLRSASLPRRTS*TPGRDSRDPAP
Trigger: GGGAGCCGGGTCTCTGGAGTCGCGGCCCGGGGTTCACGATGTCCGACGAGGAAGCGAGGCAGAGCGGAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
CDS TCA 72 bp TCTCCTCCTTGCGCCGCATCAGCTCCTGGACGTCGCTaGCAGTCACGACGCCGGCCTGCGAGGAGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: SPPCAASAPGRR*QSRRRPARSLR
Trigger: GCGGAGGCTCCTCGCAGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCGCAAGGAGGAGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS GCA 72 bp ACAGTCACGACGCCGGCCTGCGAGGAGCCTCCGCTCTaGCTCGCTTCCTCGTCGGACATCGTGAACCCCGGG +
Preference number: 6 (lower is better)
Translates to: TVTTPACEEPPL*LASSSDIVNPG
Trigger: CCCGGGGTTCACGATGTCCGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
CDS GCA 72 bp AGCTCCTGGACGTCGCTGACAGTCACGACGCCGGCCTaGGAGGAGCCTCCGCTCTGCCTCGCTTCCTCGTCG +
Preference number: 6 (lower is better)
Translates to: SSWTSLTVTTPA*EEPPLCLASSS
Trigger: CGACGAGGAAGCGAGGCAGAGCGGAGGCTCCTCGCAGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS TCA 72 bp GTGCCTGGCGGTGCGGACTTGGTACAGGTCCACGTCTaGCCGGGGGTAGCCCTCACAGTCCACCAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: VPGGADLVQVHV*PGVALTVHQRL
Trigger: GAGCCGCTGGTGGACTGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTACCAAGTCCGCACCGCCAGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS TCA 72 bp CTTGCAGACCCGCGATGCTGGCTGGGGAGCCGGGGCTaGTGCTGTTCACTTTGGCGAAGGCCCGTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: LADPRCWLGSRG*CCSLWRRPVEG
Trigger: GCCCTCCACGGGCCTTCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGGTCTGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000541212.6
ENST00000544724.5
CDS TCA 72 bp CCTGGATTACCGCGATGCTGGCTGGGGAGCCGGGGCTaGTGCTGTTCACTTTGGCGAAGGCCCGTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: PGLPRCWLGSRG*CCSLWRRPVEG
Trigger: GCCCTCCACGGGCCTTCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGTAATCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS GCA 72 bp GCCATGTCCCGGGCCTGCTTCTCCTTGTCGCGAGCGTaGAGCTGGTGCAGGGCCTCCTCCACCTGCTTCATC +
Preference number: 6 (lower is better)
Translates to: AMSRACFSLSRA*SWCRASSTCFI
Trigger: GATGAAGCAGGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGCGACAAGGAGAAGCAGGCCCGGGACATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000541212.6
ENST00000543699.5
ENST00000544724.5
CDS TCA 72 bp TTGGCGAAGGCCCGTGGAGGGCCCTGGCTCTCACTCTaGCCCAGTTTGCGGCTCATGGCCTCTTTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: LAKARGGPWLSL*PSLRLMASLWA
Trigger: GGCCCACAAAGAGGCCATGAGCCGCAAACTGGGTCAGAGTGAGAGCCAGGGCCCTCCACGGGCCTTCGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000541212.6
ENST00000543699.5
ENST00000544724.5
CDS GCA 72 bp ATGGCCTCTTTGTGGGCCTCAGCCATGTCCCGGGCCTaGTTCTCCTTGTCGCGAGCGTGCAGCTGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: MASLWASAMSRA*FSLSRACSWCR
Trigger: CCTGCACCAGCTGCACGCTCGCGACAAGGAGAAGCAGGCCCGGGACATGGCTGAGGCCCACAAAGAGGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000541212.6
ENST00000543699.5
ENST00000544724.5
CDS CCA 72 bp TGCGCTTCTATCTCCTCCTTGCGCCGCATCAGCTCCTaGACGTCGCTGACAGTCACGACGCCGGCCTGCGAG +
Preference number: 6 (lower is better)
Translates to: CASISSLRRISS*TSLTVTTPACE
Trigger: CTCGCAGGCCGGCGTCGTGACTGTCAGCGACGTCCAGGAGCTGATGCGGCGCAAGGAGGAGATAGAAGCGCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000542602.1
ENST00000543699.5
CDS CCA 72 bp GGCCCTGGCTCTCACTCTGACCCAGTTTGCGGCTCATaGCCTCTTTGTGGGCCTCAGCCATGTCCCGGGCCT +
Preference number: 6 (lower is better)
Translates to: GPGSHSDPVCGS*PLCGPQPCPGP
Trigger: AGGCCCGGGACATGGCTGAGGCCCACAAAGAGGCCATGAGCCGCAAACTGGGTCAGAGTGAGAGCCAGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000541212.6
ENST00000543699.5
ENST00000544724.5
CDS CCA 72 bp ACTTGCAGACCCGTGTCCCCTGGGCATGGACTTGAGTaGCCAACCCCTGGATTACCGCGATGCTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: TCRPVSPGHGLE*PTPGLPRCWLG
Trigger: CCCCAGCCAGCATCGCGGTAATCCAGGGGTTGGCCACTCAAGTCCATGCCCAGGGGACACGGGTCTGCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS GCA 72 bp GAGGGAGTCCACAGGGAGGTGGCCAAAGGGCACCCCTaGTACAGGGCTCTTGCCAATTGGCTGGGTTTGGGA +
Preference number: 6 (lower is better)
Translates to: EGVHREVAKGHP*YRALANWLGLG
Trigger: TCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCCCTGTGGACTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CAA 72 bp CATCCACTTGCAGACCCGTGTCCCCTGGGCATGGACTaGAGTGGCCAACCCCTGGATTACCGCGATGCTGGC +
Preference number: 6 (lower is better)
Translates to: HPLADPCPLGMD*SGQPLDYRDAG
Trigger: GCCAGCATCGCGGTAATCCAGGGGTTGGCCACTCAAGTCCATGCCCAGGGGACACGGGTCTGCAAGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS TCA 72 bp ATCCACTTGCAGACCCGTGTCCCCTGGGCATGGACTTaGGTGGCCAACCCCTGGATTACCGCGATGCTGGCT +
Preference number: 6 (lower is better)
Translates to: IHLQTRVPWAWT*VANPWITAMLA
Trigger: AGCCAGCATCGCGGTAATCCAGGGGTTGGCCACTCAAGTCCATGCCCAGGGGACACGGGTCTGCAAGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS GCA 72 bp GGAGGTGGCCAAAGGGCACCCCTGCTACAGGGCTCTTaGCAATTGGCTGGGTTTGGGAGGAAGACCCAATGC +
Preference number: 6 (lower is better)
Translates to: GGGQRAPLLQGS*QLAGFGRKTQC
Trigger: GCATTGGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 72 bp TTGAGTGGCCAACCCCTGGATTACCGCGATGCTGGCTaGGGAGCCGGGGCTGATGCTGTTCACTTTGGCGAA +
Preference number: 6 (lower is better)
Translates to: LSGQPLDYRDAG*GAGADAVHFGE
Trigger: TTCGCCAAAGTGAACAGCATCAGCCCCGGCTCCCCAGCCAGCATCGCGGTAATCCAGGGGTTGGCCACTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535293.5
ENST00000543699.5
CDS CCA 72 bp AGACATTCAGTCCAGGAGAGGGAGTCCACAGGGAGGTaGCCAAAGGGCACCCCTGCTACAGGGCTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: RHSVQERESTGR*PKGTPATGLLP
Trigger: TGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCCCTGTGGACTCCCTCTCCTGGACTGAATGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CAA 72 bp GGGAGGTGGCCAAAGGGCACCCCTGCTACAGGGCTCTaGCCAATTGGCTGGGTTTGGGAGGAAGACCCAATG +
Preference number: 6 (lower is better)
Translates to: GRWPKGTPATGL*PIGWVWEEDPM
Trigger: CATTGGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 72 bp CAGGAAGGGGCAGTGGGTAACGGGGCCACCTCCTCCTaGGGTTCCTTTGAGGGCAGCTCTAGTAAAGATGAC +
Preference number: 6 (lower is better)
Translates to: QEGAVGNGATSS*GSFEGSSSKDD
Trigger: GTCATCTTTACTAGAGCTGCCCTCAAAGGAACCCCAGGAGGAGGTGGCCCCGTTACCCACTGCCCCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS CAA 72 bp CAGTGGGTAACGGGGCCACCTCCTCCTGGGGTTCCTTaGAGGGCAGCTCTAGTAAAGATGACCAGGTCTGCC +
Preference number: 6 (lower is better)
Translates to: QWVTGPPPPGVP*RAALVKMTRSA
Trigger: GGCAGACCTGGTCATCTTTACTAGAGCTGCCCTCAAAGGAACCCCAGGAGGAGGTGGCCCCGTTACCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS GCA 72 bp GAAAGTAGGATGGTGGGTGCCAGGGCCCCCTCACTGTaGTGCACCACACTGCCAATGTTATGCAGTGACTGG +
Preference number: 6 (lower is better)
Translates to: ESRMVGARAPSL*CTTLPMLCSDW
Trigger: CCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGGCCCTGGCACCCACCATCCTACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS CCA 72 bp TACATTTGCAGCATAATCCTGTGGTTGGCGAGAGGGTaGGGAACGTGGCACTGCACTCTCAGGGCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: YICSIILWLARG*GTWHCTLRAAR
Trigger: CCTGGCTGCCCTGAGAGTGCAGTGCCACGTTCCCCACCCTCTCGCCAACCACAGGATTATGCTGCAAATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361485.5
CDS CAA 90 bp GCAATCTGCAGGCCACGCCAGCACAGCAGCTGGTATTTTGATACCTaGTGCCTGTCAGTGGGATTGCGGTACTACCTGACCTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: AICRPRQHSSWYFDT*CLSVGLRYYLTCLL
Trigger: GAGGAGGCAGGTCAGGTAGTACCGCAATCCCACTGACAGGCACAAGGTATCAAAATACCAGCTGCTGTGCTGGCGTGGCCTGCAGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CAA 90 bp GAGTCCACAGGGAGGTGGCCAAAGGGCACCCCTGCTACAGGGCTCTaGCCAATTGGCTGGGTTTGGGAGGAAGACCCAATGCTACAAAAT +
Preference number: 6 (lower is better)
Translates to: ESTGRWPKGTPATGL*PIGWVWEEDPMLQN
Trigger: ATTTTGTAGCATTGGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCCCTGTGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS GCA 72 bp GGCCCCTCACTGTGCTGCACCACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGGGTGTTCACAGAGCCG +
Preference number: 6 (lower is better)
Translates to: GPSLCCTTLPML*SDWKFWVFTEP
Trigger: CGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS GCA 72 bp GCCCCCTCACTGTGCTGCACCACACTGCCAATGTTATaGAGTGACTGGAAGTTCTGGGTGTTCACAGAGCCG +
Preference number: 6 (lower is better)
Translates to: APSLCCTTLPML*SDWKFWVFTEP
Trigger: CGGCTCTGTGAACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS CAA 72 bp GGCCAAAGGGCACCCCTGCTACAGGGCTCTTGCCAATaGGCTGGGTTTGGGAGGAAGACCCAATGCTACAAA +
Preference number: 6 (lower is better)
Translates to: GQRAPLLQGSCQ*AGFGRKTQCYK
Trigger: TTTGTAGCATTGGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS TCA 72 bp CTTGCAGACCGCTTTCCAGCACGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCTCCTTGCGCCGCATCA +
Preference number: 6 (lower is better)
Translates to: LADRFPARHSWP*SALLSPPCAAS
Trigger: TGATGCGGCGCAAGGAGGAGATAGAAGCGCAGATCAAGGCCAACTATGACGTGCTGGAAAGCGGTCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542602.1
CDS GCA 72 bp CGGATCACTGTCACATTCAGGGGCCCCTCACTGTGCTaGACCACACTGCCAATGTTATGCAGTGACTGGAAG +
Preference number: 6 (lower is better)
Translates to: RITVTFRGPSLC*TTLPMLCSDWK
Trigger: CTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGCCCCTGAATGTGACAGTGATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS GCA 72 bp TCAGTGGGATTGCGGTACTACCTGACCTGCCTCCTCTaGCACTGTCACTTTGGAGCAAAGGCAAGACCCTCA +
Preference number: 6 (lower is better)
Translates to: SVGLRYYLTCLL*HCHFGAKARPS
Trigger: TGAGGGTCTTGCCTTTGCTCCAAAGTGACAGTGGCAGAGGAGGCAGGTCAGGTAGTACCGCAATCCCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS GCA 72 bp CCACGCCAGCACAGCAGCTGGTATTTTGATACCTTGTaGCTGTCAGTGGGATTGCGGTACTACCTGACCTGC +
Preference number: 6 (lower is better)
Translates to: PRQHSSWYFDTL*LSVGLRYYLTC
Trigger: GCAGGTCAGGTAGTACCGCAATCCCACTGACAGGCACAAGGTATCAAAATACCAGCTGCTGTGCTGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 72 bp GCCAAAGGGCACCCCTGCTACAGGGCTCTTGCCAATTaGCTGGGTTTGGGAGGAAGACCCAATGCTACAAAA +
Preference number: 6 (lower is better)
Translates to: AKGHPCYRALAN*LGLGGRPNATK
Trigger: TTTTGTAGCATTGGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CAA 72 bp AGGCCACGCCAGCACAGCAGCTGGTATTTTGATACCTaGTGCCTGTCAGTGGGATTGCGGTACTACCTGACC +
Preference number: 6 (lower is better)
Translates to: RPRQHSSWYFDT*CLSVGLRYYLT
Trigger: GGTCAGGTAGTACCGCAATCCCACTGACAGGCACAAGGTATCAAAATACCAGCTGCTGTGCTGGCGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CAA 90 bp CAGGGAGGTGGCCAAAGGGCACCCCTGCTACAGGGCTCTTGCCAATaGGCTGGGTTTGGGAGGAAGACCCAATGCTACAAAATCTTTGAT +
Preference number: 6 (lower is better)
Translates to: QGGGQRAPLLQGSCQ*AGFGRKTQCYKIFD
Trigger: ATCAAAGATTTTGTAGCATTGGGTCTTCCTCCCAAACCCAGCCAATTGGCAAGAGCCCTGTAGCAGGGGTGCCCTTTGGCCACCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS GCA 72 bp CAGCTGGTGCAGGGCCTCCTCCACCTGCTTCATCACTaGCTTGTGATCATTCTGCAGGCATATGATGTTGTG +
Preference number: 6 (lower is better)
Translates to: QLVQGLLHLLHH*LVIILQAYDVV
Trigger: CACAACATCATATGCCTGCAGAATGATCACAAGGCAGTGATGAAGCAGGTGGAGGAGGCCCTGCACCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000535293.5
ENST00000537407.5
ENST00000538613.5
ENST00000541212.6
ENST00000543699.5
CDS GCA 72 bp TCACATTCAGGGGCCCCTCACTGTGCTGCACCACACTaGCAATGTTATGCAGTGACTGGAAGTTCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: SHSGAPHCAAPH*QCYAVTGSSGC
Trigger: ACACCCAGAACTTCCAGTCACTGCATAACATTGGCAGTGTGGTGCAGCACAGTGAGGGGCCCCTGAATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261817.6
CDS GCA 72 bp CCACATACTGATCACTTACACCAGGGGCTCTACTCATaGCCTCACAACTACCCTGGGGTGGGCACTGTGTTT +
Preference number: 6 (lower is better)
Translates to: PHTDHLHQGLYS*PHNYPGVGTVF
Trigger: AAACACAGTGCCCACCCCAGGGTAGTTGTGAGGGCATGAGTAGAGCCCCTGGTGTAAGTGATCAGTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS GCA 72 bp GCATCCCTAGACTCTGCAATGCCTGGCACAGGGAAGTaGTCAATACACAGCTGTTGGGGAATGGAACGAACG +
Preference number: 6 (lower is better)
Translates to: ASLDSAMPGTGK*SIHSCWGMERT
Trigger: CGTTCGTTCCATTCCCCAACAGCTGTGTATTGAGCACTTCCCTGTGCCAGGCATTGCAGAGTCTAGGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 72 bp ACCATGGCAATCTGCAGGCCACGCCAGCACAGCAGCTaGTATTTTGATACCTTGTGCCTGTCAGTGGGATTG +
Preference number: 6 (lower is better)
Translates to: TMAICRPRQHSS*YFDTLCLSVGL
Trigger: CAATCCCACTGACAGGCACAAGGTATCAAAATACCAGCTGCTGTGCTGGCGTGGCCTGCAGATTGCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 72 bp CTGCTTCATCACTGCCTTGTGATCATTCTGCAGGCCTaGGATGAGAACCACACATCAGGGGCCAAGGAAGAC +
Preference number: 6 (lower is better)
Translates to: LLHHCLVIILQA*DENHTSGAKED
Trigger: GTCTTCCTTGGCCCCTGATGTGTGGTTCTCATCCCAGGCCTGCAGAATGATCACAAGGCAGTGATGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CAA 72 bp TCTGAGAGCTGGCAGTTACCAGACACTGTGAAGGCCTaGAGGAGCATGGGAAAGGCCAAATGCTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SESWQLPDTVKA*RSMGKAKCCSL
Trigger: CAGAGAGCAGCATTTGGCCTTTCCCATGCTCCTCAAGGCCTTCACAGTGTCTGGTAACTGCCAGCTCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS CAA 90 bp CAGCACAGCAGCTGGTATTTTGATACCTTGTGCCTGTCAGTGGGATaGCGGTACTACCTGACCTGCCTCCTCTGCCACTGTCACTTTGGA +
Preference number: 6 (lower is better)
Translates to: QHSSWYFDTLCLSVG*RYYLTCLLCHCHFG
Trigger: TCCAAAGTGACAGTGGCAGAGGAGGCAGGTCAGGTAGTACCGCAATCCCACTGACAGGCACAAGGTATCAAAATACCAGCTGCTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS TCA 72 bp TGCCTTTTTGGCTTTCCAGCACGTCATAGTTGGCCTTaGTCTGCGCTTCTATCTCCTCCTTGCGCCGCATCA +
Preference number: 6 (lower is better)
Translates to: CLFGFPARHSWP*SALLSPPCAAS
Trigger: TGATGCGGCGCAAGGAGGAGATAGAAGCGCAGATCAAGGCCAACTATGACGTGCTGGAAAGCCAAAAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261817.6
ENST00000537407.5
ENST00000538613.5
ENST00000540962.5
ENST00000541212.6
ENST00000543699.5
CDS CAA 72 bp AGCTGGTATTTTGATACCTTGTGCCTGTCAGTGGGATaGCGGTACTACCTGACCTGCCTCCTCTGCCACTGT +
Preference number: 6 (lower is better)
Translates to: SWYFDTLCLSVG*RYYLTCLLCHC
Trigger: ACAGTGGCAGAGGAGGCAGGTCAGGTAGTACCGCAATCCCACTGACAGGCACAAGGTATCAAAATACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS TCA 72 bp CAGAAGGAAGGTAACAACCAGCTGAATCCACAGCCATaGACTCAAAGGCATATGTATGAGGGGCCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: QKEGNNQLNPQP*TQRHMYEGPAL
Trigger: CAGCGCTGGCCCCTCATACATATGCCTTTGAGTTCATGGCTGTGGATTCAGCTGGTTGTTACCTTCCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS TCA 72 bp ATGCCAGATGTGGAGCTAGAGGTGAGAAGGAGTCTCTaGCCAAGACAGAGGACATTCCCTCATGGAGCATTC +
Preference number: 6 (lower is better)
Translates to: MPDVELEVRRSL*PRQRTFPHGAF
Trigger: GAATGCTCCATGAGGGAATGTCCTCTGTCTTGGTCAGAGACTCCTTCTCACCTCTAGCTCCACATCTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS GCA 72 bp TCCTTTGAGGGCAGCTCTAGTAAAGATGACCAGGTCTaGCCAATGTCTGAGAGCTGGCAGTTACCAGACACT +
Preference number: 6 (lower is better)
Translates to: SFEGSSSKDDQV*PMSESWQLPDT
Trigger: AGTGTCTGGTAACTGCCAGCTCTCAGACATTGGGCAGACCTGGTCATCTTTACTAGAGCTGCCCTCAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS TCA 72 bp CCCTGCGGATCACTGTCACATTCAGGGGCTTCTAGATaGGGTCCCTGGAGTAGTCAAATTCATAGAGACAGA +
Preference number: 6 (lower is better)
Translates to: PCGSLSHSGASR*GPWSSQIHRDR
Trigger: TCTGTCTCTATGAATTTGACTACTCCAGGGACCTCATCTAGAAGCCCCTGAATGTGACAGTGATCCGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537407.5
CDS CCA 72 bp CCACCACTCATTCACCCCTGTAACAAGTATTTGTTGTaGGCCAACTGGCACTGGGTTAGATGCAGTAGATGG +
Preference number: 6 (lower is better)
Translates to: PPLIHPCNKYLL*ANWHWVRCSRW
Trigger: CCATCTACTGCATCTAACCCAGTGCCAGTTGGCCCACAACAAATACTTGTTACAGGGGTGAATGAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS CAA 90 bp GTTCTGGGTGTTCACAGAGCCGAACTCCACAATCTCATCATCCACTaGCAGACCCTGGAGAGGGAAGGAAAAATGGAAAATCAGGCTAGA +
Preference number: 6 (lower is better)
Translates to: VLGVHRAELHNLIIH*QTLEREGKMENQAR
Trigger: TCTAGCCTGATTTTCCATTTTTCCTTCCCTCTCCAGGGTCTGCAAGTGGATGATGAGATTGTGGAGTTCGGCTCTGTGAACACCCAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS TCA 72 bp ACTGTCACTTTGGAGCAAAGGCAAGACCCTCAGTCATaGAGGGATTCAAGTTCTCAACCCACAGGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: TVTLEQRQDPQS*RDSSSQPTGAD
Trigger: ATCTGCTCCTGTGGGTTGAGAACTTGAATCCCTTCATGACTGAGGGTCTTGCCTTTGCTCCAAAGTGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CAA 72 bp GTTCACAGAGCCGAACTCCACAATCTCATCATCCACTaGCAGACCCTGGAGAGGGAAGGAAAAATGGAAAAT +
Preference number: 6 (lower is better)
Translates to: VHRAELHNLIIH*QTLEREGKMEN
Trigger: ATTTTCCATTTTTCCTTCCCTCTCCAGGGTCTGCAAGTGGATGATGAGATTGTGGAGTTCGGCTCTGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS GCA 72 bp GTGGGAAAAGAACCCAGATCTGAACAAGTGGAGACATaGACTTGGGAGGCAGACTTACATAATACATGGTCA +
Preference number: 6 (lower is better)
Translates to: VGKEPRSEQVET*TWEADLHNTWS
Trigger: TGACCATGTATTATGTAAGTCTGCCTCCCAAGTGCATGTCTCCACTTGTTCAGATCTGGGTTCTTTTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CAA 72 bp TCAGGGGAGGGGCTTTGCAATTGGTTAGACTTTAATTaGAATCTCAACTCTGCCATGTACAAGCTGGGCATC +
Preference number: 6 (lower is better)
Translates to: SGEGLCNWLDFN*NLNSAMYKLGI
Trigger: GATGCCCAGCTTGTACATGGCAGAGTTGAGATTCAAATTAAAGTCTAACCAATTGCAAAGCCCCTCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535293.5
CDS CCA 72 bp ATGGAAAATCAGGCTAGAGGTTCAGTGTGCTCCTGGTaGTCTCTAACCTTCAATACCCAATTTAATGCCAAG +
Preference number: 6 (lower is better)
Translates to: MENQARGSVCSW*SLTFNTQFNAK
Trigger: CTTGGCATTAAATTGGGTATTGAAGGTTAGAGACCACCAGGAGCACACTGAACCTCTAGCCTGATTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS GCA 72 bp GAAGGAAAAATGGAAAATCAGGCTAGAGGTTCAGTGTaGTCCTGGTGGTCTCTAACCTTCAATACCCAATTT +
Preference number: 6 (lower is better)
Translates to: EGKMENQARGSV*SWWSLTFNTQF
Trigger: AAATTGGGTATTGAAGGTTAGAGACCACCAGGAGCACACTGAACCTCTAGCCTGATTTTCCATTTTTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544254.1
CDS CCA 72 bp AAAGAACCCAGATCTGAACAAGTGGAGACATGCACTTaGGAGGCAGACTTACATAATACATGGTCACTTTCA +
Preference number: 6 (lower is better)
Translates to: KEPRSEQVETCT*EADLHNTWSLS
Trigger: TGAAAGTGACCATGTATTATGTAAGTCTGCCTCCCAAGTGCATGTCTCCACTTGTTCAGATCTGGGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544724.5
CDS CCA 72 bp AAAATGGAAAATCAGGCTAGAGGTTCAGTGTGCTCCTaGTGGTCTCTAACCTTCAATACCCAATTTAATGCC +
Preference number: 6 (lower is better)
Translates to: KMENQARGSVCS*WSLTFNTQFNA
Trigger: GGCATTAAATTGGGTATTGAAGGTTAGAGACCACCAGGAGCACACTGAACCTCTAGCCTGATTTTCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544254.1