RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSMD13 (Homo sapiens)

Ensembl gene IDs: ENSG00000185627

Ensembl transcript IDs: ENST00000352303.9, ENST00000382671.8, ENST00000431206.6, ENST00000525665.5, ENST00000526783.1, ENST00000527047.5, ENST00000527982.1, ENST00000528906.5, ENST00000529372.5, ENST00000529679.1, ENST00000532097.6, ENST00000533717.5, ENST00000534590.5, ENST00000621534.4

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGTGAGTCAAAGGAGACACGACGGGGAACCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGTGCTCCACCAGCATCTCCATGCTCT +
Preference number: 1 (lower is better)
Translates to: QVSQRRHDGEPGGPR*GCHGPGAPPASPCS
Trigger: AGAGCATGGAGATGCTGGTGGAGCACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGGTTCCCCGTCGTGTCTCCTTTGACTCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR TCA 90 bp CCGTCTGAGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACGGGGAACCAGGGGGCCCTAGGTGAG +
Preference number: 1 (lower is better)
Translates to: PSEQPASLAANASLR*VKGDTTGNQGALGE
Trigger: CTCACCTAGGGCCCCCTGGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCTCAGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR GCA 90 bp GGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGA +
Preference number: 1 (lower is better)
Translates to: GMEIHLGVHRLQGAS*LARSFSPVSPKTLR
Trigger: TCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR GCA 90 bp GCTGCACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTaGCTTTCACCAGCCCCACCGAAAGGGCCTTCATCACCAGAAGCT +
Preference number: 1 (lower is better)
Translates to: AAPRSCGLVCPPRLY*LSPAPPKGPSSPEA
Trigger: AGCTTCTGGTGATGAAGGCCCTTTCGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR CCA 90 bp CCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATTaGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGG +
Preference number: 1 (lower is better)
Translates to: PPPKFNVDRLSSQLH*LQTPLSGESKETRR
Trigger: CCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR TCA 90 bp CCCAGGCAGTCTTCAGAGTCTGGAACCGCTCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAATCAGCCACTGCCGGTCAGTATTCC +
Preference number: 1 (lower is better)
Translates to: PRQSSESGTALRCHC*RHRGCQSATAGQYS
Trigger: GGAATACTGACCGGCAGTGGCTGATTGACACCCTCTATGCCTTCAACAGTGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR CCA 90 bp ACCCTCTGCAGGAGAGACCCACAAAGAAGCCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCT +
Preference number: 1 (lower is better)
Translates to: TLCRRDPQRSLLPVA*LPSGTVLFLEQEQS
Trigger: AGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAGGCTTCTTTGTGGGTCTCTCCTGCAGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR TCA 90 bp TTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGT +
Preference number: 1 (lower is better)
Translates to: FRQDPNPHPNSMSTV*AASFIGCKRLSQVS
Trigger: ACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR CCA 90 bp TTGATCTGTTGCAAATCCAACACTCGGGGCTGCACCCAGGTCATGTaGACTCGTTTGTCCACCTCGTCTATACTGCCTTTCACCAGCCCC +
Preference number: 1 (lower is better)
Translates to: LICCKSNTRGCTQVM*TRLSTSSILPFTSP
Trigger: GGGGCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR CCA 90 bp GGAACATTCTCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCT +
Preference number: 1 (lower is better)
Translates to: GTFSNRNGKDVRTGG*GWRSTSEYTDFRGP
Trigger: AGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGAGAATGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR CCA 90 bp TATAGGAACATTCTCAAACCGCAACGGAAAAGATGTCCGTACAGGTaGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGG +
Preference number: 1 (lower is better)
Translates to: YRNILKPQRKRCPYR*MGMEIHLGVHRLQG
Trigger: CCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGAGAATGTTCCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR CCA 90 bp CTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTaGAGAGATCATAGAAACGACTGTGAACCGATGTCACACCAGGAA +
Preference number: 1 (lower is better)
Translates to: LCSRTRGFRLFDSIY*RDHRNDCEPMSHQE
Trigger: TTCCTGGTGTGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
3UTR-3UTR CCA 90 bp GTCAAAGGAGACACGACGGGGAACCAGGGGGCCCTAGGTGAGGATGTCATGGGCCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 2 (lower is better)
Translates to: VKGDTTGNQGALGEDVMGLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...GCCCATGACATCCTCACCTAGGGCCCCCTGGTTCCCCGTCGTGTCTCCTTTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR CCA 90 bp GCCTCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 2 (lower is better)
Translates to: ASCLARSFSPVSPKTLRPLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...GGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp GGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 2 (lower is better)
Translates to: GDPPRSTQTSGGLLPGTFSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...GAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR CCA 90 bp CAGCCACTGCCGGTCAGTATTCCTCAGGGACTCCAGCACAGGGTGCATGAGGAGGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCG +
Preference number: 2 (lower is better)
Translates to: QPLPVSIPQGLQHRVHEEVRTGG*GWRSTS
Trigger: CGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC...CTCCTCATGCACCCTGTGCTGGAGTCCCTGAGGAATACTGACCGGCAGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR TCA 90 bp TGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 2 (lower is better)
Translates to: WRSTSEYTDFRGPPAWHVNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...AACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp CGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGTATCACCTAAGACCCTaGGACCCCCACCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RTGGWGWRSTSEYTDFRGYHLRP*DPHPLQ
Trigger: CTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATA...CCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp AGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTTTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 2 (lower is better)
Translates to: RSTSEYTDFRGPPAWHVLSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...AAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp TCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGTATCACCTAAGACCCTaGGACCCCCACCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: SVQVDGDGDPPRSTQTSGYHLRP*DPHPLQ
Trigger: CTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATA...CCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp ATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCACTGCTAGCCCCAGCGTaGAGGCTCTCTCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: MSVQVDGDGDPPRSTQTSLLAPA*RLSPAA
Trigger: AGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAG...TGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR CCA 90 bp TCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 2 (lower is better)
Translates to: SNRNGKDVRTGGWGWRSTLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...GGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR CAA 90 bp TGCAAATCCAACACTCGGGGCTGCACCCAGGTCATGTGGACTCGTTaGTCCACCTCGTCTATACTGCCTTTCACCAGCCCCACCGAAAGG +
Preference number: 2 (lower is better)
Translates to: CKSNTRGCTQVMWTR*STSSILPFTSPTER
Trigger: CCTTTCGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR TCA 90 bp GTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 2 (lower is better)
Translates to: VRTGGWGWRSTSEYTDFRNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...CCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR GCA 90 bp GCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: ARSFSPVSPKTLRPPPSAASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...TGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR GCA 90 bp AACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGCTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: NRNGKDVRTGGWGWRSTSLQGAS*LARSFS
Trigger: AGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAG...CGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR GCA 90 bp GTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: VSPKTLRPPPSAGETHKEASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...TTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR GCA 90 bp ACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTGCCTTTCACCAGCCTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: TQVMWTRLSTSSILPFTSLQGAS*LARSFS
Trigger: AGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAG...GCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR TCA 90 bp CTTCACATCCGTGCACCAGAACTCCAGGCGGTCCTTCATTCCCTTGATCTGTTGAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 2 (lower is better)
Translates to: LHIRAPELQAVLHSLDLLNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...CAACAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTGCACGGATGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR TCA 90 bp TCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 2 (lower is better)
Translates to: SNRNGKDVRTGGWGWRSTSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...GGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp ATCCGTGCACCAGAACTCCAGGCGGTCCTTCATTCCCTTGATCTGTTGCAAATCTATCACCTAAGACCCTaGGACCCCCACCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: IRAPELQAVLHSLDLLQIYHLRP*DPHPLQ
Trigger: CTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATA...GATTTGCAACAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTGCACGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR GCA 90 bp CAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: QTATEKMSVQVDGDGDPPASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...AGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR CCA 90 bp CAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 2 (lower is better)
Translates to: QEQSVLQTGSQPPPKFNVLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...GACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR CCA 90 bp ATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAACAGGTGGATGGGGATaGAGATCCACCTCGGAGTAC +
Preference number: 2 (lower is better)
Translates to: MSVQVDGDGDPPRSTQTSTGGWG*RSTSEY
Trigger: GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGT...TGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR CCA 90 bp GGCTGCACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTGCCTTTCGCAGTCTTCAGAGTCTaGAACCGCTCTACGTTGCCA +
Preference number: 2 (lower is better)
Translates to: GCTQVMWTRLSTSSILPFAVFRV*NRSTLP
Trigger: TGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGC...GAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR CCA 90 bp AACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACGCTAAATCAGGCTGCTaGCCCCAGGCAGTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: NGKDVRTGGWGWRSTSEYAKSGC*PQAVFR
Trigger: TCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTAGC...GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR TCA 90 bp TGCCGGTCAGTATTCCTCAGGGACTCCAGCACAGGGTGCATGAGGAGTTCTCCAACAAAGGGTTCACCCTaGAATAAAAGCCACCAGCCT +
Preference number: 2 (lower is better)
Translates to: CRSVFLRDSSTGCMRSSPTKGSP*NKSHQP
Trigger: AGGCTGGTGGCTTTTATTTCAGGGTGAACCCTTTGT...TGGAGAACTCCTCATGCACCCTGTGCTGGAGTCCCTGAGGAATACTGACCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525665.5
3UTR-3UTR GCA 90 bp CCCCACCGAAAGGGCCTTCATCACCAGAAGCTCCACCTCATTCACTGTGATTTTGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: PHRKGLHHQKLHLIHCDFASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...AAAATCACAGTGAATGAGGTGGAGCTTCTGGTGATGAAGGCCCTTTCGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR TCA 90 bp CCAGCATCTCCATGCTCTTCACATCCGTGCACCAGAACTCCAGGCGGTCCTTCAACACTGGTAGATCCTTaGTGTCAACACAGCCCAAAA +
Preference number: 2 (lower is better)
Translates to: PASPCSSHPCTRTPGGPSTLVDP*CQHSPK
Trigger: TTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGT...TGAAGGACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCATGGAGATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR GCA 90 bp CAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGCTGCTAAATCAGGCTaGTGGCCCCAGGCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: QEQSVLQTGSQPPPKFNVAAKSG*WPQAVF
Trigger: GAAGACTGCCTGGGGCCAGCAGCCTGATTTAGCAGC...GACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR TCA 90 bp AGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 2 (lower is better)
Translates to: SPVFRARTVCTSDRIPTPNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...GGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp AGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 2 (lower is better)
Translates to: SPVFRARTVCTSDRIPTPSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...GGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR CCA 90 bp ACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCG +
Preference number: 2 (lower is better)
Translates to: TVLFLEQEQSVLQTGSQPVRTGG*GWRSTS
Trigger: CGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC...GGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp CCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGAAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 2 (lower is better)
Translates to: PSGTVLFLEQEQSVLQTGNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...TCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR TCA 90 bp ACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTGCCTTTCACCAGCATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: TQVMWTRLSTSSILPFTSMRHNN*IFLRSW
Trigger: CCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCAT...GCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR CCA 90 bp CCCCACCGAAAGGGCCTTCATCACCAGAAGCTCCACCTCATTCACTGTGATTTTATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: PHRKGLHHQKLHLIHCDFIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...AAAATCACAGTGAATGAGGTGGAGCTTCTGGTGATGAAGGCCCTTTCGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR GCA 90 bp AAGAACAAAGCAGAGGGGTTTATTATAGGAACATTCTCAAACCGCAACGGAAAAGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: KNKAEGFIIGTFSNRNGKASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...TTTTCCGTTGCGGTTTGAGAATGTTCCTATAATAAACCCCTCTGCTTTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR CCA 90 bp GTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCAATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: VLFLEQEQSVLQTGSQPPIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...TGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR CAA 90 bp CCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAA +
Preference number: 2 (lower is better)
Translates to: PKTAEHLCSRTRGFR*FDSIYWRDHRNDCE
Trigger: TTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
3UTR TCA 72 bp CAAAGGAGACACGACGGGGAACCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGTGCTCCACCAGCATCT +
Preference number: 3 (lower is better)
Translates to: QRRHDGEPGGPR*GCHGPGAPPAS
Trigger: AGATGCTGGTGGAGCACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGGTTCCCCGTCGTGTCTCCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR TCA 72 bp CAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACGGGGAACCAGGGGGCC +
Preference number: 3 (lower is better)
Translates to: QPASLAANASLR*VKGDTTGNQGA
Trigger: GGCCCCCTGGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR GCA 72 bp GGATGTCATGGGCCTGGTGCTCCACCAGCATCTCCATaGTCTTCACATCCGTGCACCAGAACTCCAGGCGGT +
Preference number: 3 (lower is better)
Translates to: GCHGPGAPPASP*SSHPCTRTPGG
Trigger: ACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCATGGAGATGCTGGTGGAGCACCAGGCCCATGACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR GCA 72 bp ATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCTCCCGTATCACCTAAG +
Preference number: 3 (lower is better)
Translates to: IHLGVHRLQGAS*LARSFSPVSPK
Trigger: CTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR CCA 72 bp CGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATaGAGATCCACCTCGGAGTACACAGACTTCAGGGGG +
Preference number: 3 (lower is better)
Translates to: RNGKDVRTGGWG*RSTSEYTDFRG
Trigger: CCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR CAA 90 bp GGCTGCACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTGCCTTTCAAAAGCCACCAGCCTTaGAGCACCGCCGAGCATCAA +
Preference number: 3 (lower is better)
Translates to: GCTQVMWTRLSTSSILPFKSHQP*STAEHQ
Trigger: TTGATGCTCGGCGGTGCTCAAAGGCTGGTGGCTTTT...GAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525665.5
3UTR TCA 72 bp GATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: DPNPHPNSMSTV*AASFIGCKRLS
Trigger: AGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR CCA 72 bp AGGAGAGACCCACAAAGAAGCCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAA +
Preference number: 3 (lower is better)
Translates to: RRDPQRSLLPVA*LPSGTVLFLEQ
Trigger: TTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAGGCTTCTTTGTGGGTCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR TCA 72 bp TCTTCAGAGTCTGGAACCGCTCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAATCAGCCACTGCCGGT +
Preference number: 3 (lower is better)
Translates to: SSESGTALRCHC*RHRGCQSATAG
Trigger: ACCGGCAGTGGCTGATTGACACCCTCTATGCCTTCAACAGTGGCAACGTAGAGCGGTTCCAGACTCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR GCA 72 bp AGAAGTCCTGCTAGCCCCAGCGTGAAGGCTCTCTCCTaGTGCTCAGACACTGGTAGATCCTTGATGTCAACA +
Preference number: 3 (lower is better)
Translates to: RSPASPSVKALS*CSDTGRSLMST
Trigger: TGTTGACATCAAGGATCTACCAGTGTCTGAGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAGGACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR GCA 72 bp AGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTaGCTTTCACCAGCCCCACCGAAAGGGCCTTCATCA +
Preference number: 3 (lower is better)
Translates to: RSCGLVCPPRLY*LSPAPPKGPSS
Trigger: TGATGAAGGCCCTTTCGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR GCA 72 bp ATTCCCTTGATCTGTTGCAAATCCAACACTCGGGGCTaGACCCAGGTCATGTGGACTCGTTTGTCCACCTCG +
Preference number: 3 (lower is better)
Translates to: IPLICCKSNTRG*TQVMWTRLSTS
Trigger: CGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGATCAAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR CCA 72 bp TGCAAATCCAACACTCGGGGCTGCACCCAGGTCATGTaGACTCGTTTGTCCACCTCGTCTATACTGCCTTTC +
Preference number: 3 (lower is better)
Translates to: CKSNTRGCTQVM*TRLSTSSILPF
Trigger: GAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR-3UTR CAA 90 bp AGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTTTTCTTCAAAAGTGAGTaGTCTGTGATTGGCAGGTCG +
Preference number: 3 (lower is better)
Translates to: RSTSEYTDFRGPPAWHVLFFKSE*SVIGRS
Trigger: CGACCTGCCAATCACAGACAACTCACTTTTGAAGAA...AAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR CCA 72 bp TCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCGGAGTACACAGACTTC +
Preference number: 3 (lower is better)
Translates to: SNRNGKDVRTGG*GWRSTSEYTDF
Trigger: GAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR CCA 72 bp AAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATTaGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: KFNVDRLSSQLH*LQTPLSGESKE
Trigger: CTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
3UTR-3UTR CAA 90 bp TCCTGCTGCTCAGACACTGGTAGATCCTTGATGTCAACACAGCCCAAAAACCGCACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 3 (lower is better)
Translates to: SCCSDTGRSLMSTQPKNRTRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...GCGGTTTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTCTGAGCAGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
3UTR TCA 72 bp GGTCGTGTGAAAGTCATCTCCATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGGGCTTCATTAGCTGCT +
Preference number: 3 (lower is better)
Translates to: GRVKVISMRHNN*IFLRSWASLAA
Trigger: AGCAGCTAATGAAGCCCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCATGGAGATGACTTTCACACGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
3UTR TCA 72 bp AGAGCCACATTAGGATCAGTCATCTGTCTAACTACATaGAGAATGATTTCCACGAGGGACAAAGGGTTCACC +
Preference number: 3 (lower is better)
Translates to: RATLGSVICLTT*RMISTRDKGFT
Trigger: GGTGAACCCTTTGTCCCTCGTGGAAATCATTCTTCATGTAGTTAGACAGATGACTGATCCTAATGTGGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525665.5
3UTR CCA 72 bp AGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTaGAGAGATCATAGAAACGACTGTGAACCGATGTCA +
Preference number: 3 (lower is better)
Translates to: RTRGFRLFDSIY*RDHRNDCEPMS
Trigger: TGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
3UTR-3UTR CAA 90 bp AGCACTTTTGGCAATTTCTTCAAAAGTGAGTTGTCTGTGATTGGCAGGTCGTGTACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 3 (lower is better)
Translates to: STFGNFFKSELSVIGRSCTPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...ACACGACCTGCCAATCACAGACAACTCACTTTTGAAGAAATTGCCAAAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp GTCAAAGGAGACACGACGGGGAACCAGGGGGCCCTAGGTGAGGATGTCATGGGCTGCCACACAGCGGGCTaGCCGGGCCCGGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VKGDTTGNQGALGEDVMGCHTAG*PGPEFW
Trigger: CCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCA...GCCCATGACATCCTCACCTAGGGCCCCCTGGTTCCCCGTCGTGTCTCCTTTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp GGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTCCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGWGWRSTSEYTDFRGPPPGGPR*GCHGPG
Trigger: ACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGG...AGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCATGCCACACAGCGGGCTaGCCGGGCCCGGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SCLARSFSPVSPKTLRPPCHTAG*PGPEFW
Trigger: CCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCA...TGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCTGCTAGCCCCAGCGTaGAGGCTCTCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VDGDGDPPRSTQTSGGLLLLAPA*RLSPAA
Trigger: AGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAG...CAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTCTGCTAGCCCCAGCGTaGAGGCTCTCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGWGWRSTSEYTDFRGPPLLAPA*RLSPAA
Trigger: AGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAG...AGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp GTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: VDGDGDPPRSTQTSGGLLLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...CAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GGGTGTCAATCAGCCACTGCCGGTCAGTATTCCTCAGGGACTCCAGCACAGGGTCCGGTACGTCCTTCATaGCAGCAGGAAGACCCCCGG +
Preference number: 4 (lower is better)
Translates to: GCQSATAGQYSSGTPAQGPVRPS*QQEDPR
Trigger: CCGGGGGTCTTCCTGCTGTCATGAAGGACGTACCGG...ACCCTGTGCTGGAGTCCCTGAGGAATACTGACCGGCAGTGGCTGATTGACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525665.5
CDS-3UTR TCA 90 bp TCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCACCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SCLARSFSPVSPKTLRPPPGGPR*GCHGPG
Trigger: ACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGG...TGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGAGCTCCTCCAGACGGTaGCACACAGCGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QLHWLQTPLSGESKETRRSSSRR*HTAGCP
Trigger: CGGGCAGCCCGCTGTGTGGCACCGTCTGGAGGAGCT...CCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp ACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTAGCTCCTCCAGACGGTaGCACACAGCGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TGSQPPPKFNVDRLSSQLSSSRR*HTAGCP
Trigger: CGGGCAGCCCGCTGTGTGGCACCGTCTGGAGGAGCT...AAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTCCAACACTCGGGGCTaGACCCAGGTCATGTGGACT +
Preference number: 4 (lower is better)
Translates to: GDPPRSTQTSGGLLPGTFSNTRG*TQVMWT
Trigger: AGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGA...GAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CCCCAGGCAGTCTTCAGAGTCTGGAACCGCTCTACGTTGCCACTGTTGAAGGCACCGGGCCCGGAGTTCTaGCTCTGCTGTAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PQAVFRVWNRSTLPLLKAPGPEF*LCCRKP
Trigger: GGGCTTCCTACAGCAGAGCCAGAACTCCGGGCCCGG...TGCCTTCAACAGTGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp GACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTCCGGTACGTCCTTCATaGCAGCAGGAAGACCCCCGG +
Preference number: 4 (lower is better)
Translates to: DRIPTPTQIQCRPSEQPAPVRPS*QQEDPR
Trigger: CCGGGGGTCTTCCTGCTGTCATGAAGGACGTACCGG...AGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGAACCAGGGGGCTATCACCTAAGACCCTaGGACCCCCACCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CKRLSQVSQRRHDGEPGGYHLRP*DPHPLQ
Trigger: CTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATA...GCCCCCTGGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GGCCTGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTGCCACACAGCGGGCTaGCCGGGCCCGGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLAPIRDSPVFRARTVCTCHTAG*PGPEFW
Trigger: CCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCA...AGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGGCTGCTAAATCAGGCTaGTGGCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VDGDGDPPRSTQTSGGLLAAKSG*WPQAVF
Trigger: GAAGACTGCCTGGGGCCAGCAGCCTGATTTAGCAGC...CAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTGCTGCTAAATCAGGCTaGTGGCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: WRSTSEYTDFRGPPAWHVAAKSG*WPQAVF
Trigger: GAAGACTGCCTGGGGCCAGCAGCCTGATTTAGCAGC...AACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTCCACCTCGTCTATACTaGCTTTCACCAGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: GGWGWRSTSEYTDFRGPPPPRLY*LSPAPP
Trigger: CGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGG...AGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGCCGGGCCCGGAGTTCTaGCTCTGCTGTAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QLHWLQTPLSGESKETRRPGPEF*LCCRKP
Trigger: GGGCTTCCTACAGCAGAGCCAGAACTCCGGGCCCGG...CCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTAGGATGTCATGGGCCTaGTGCTCCACCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: MEIHLGVHRLQGASCLARRMSWA*CSTSIS
Trigger: GGAGATGCTGGTGGAGCACCAGGCCCATGACATCCT...ACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAGCCTCCAGGATGTCATGGGCCTaGTGCTCCACCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: PKTLRPPPSAGETHKEASRMSWA*CSTSIS
Trigger: GGAGATGCTGGTGGAGCACCAGGCCCATGACATCCT...GGAGGCTTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCG +
Preference number: 4 (lower is better)
Translates to: MGMEIHLGVHRLQGASCLVRTGG*GWRSTS
Trigger: CGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC...CAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp CAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGCTGCTAGCCCCAGCGTaGAGGCTCTCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLHWLQTPLSGESKETRRLLAPA*RLSPAA
Trigger: AGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAG...CCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp CAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QTATEKMSVQVDGDGDPPPGGPR*GCHGPG
Trigger: ACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGG...AGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RCPYRWMGMEIHLGVHRLPGGPR*GCHGPG
Trigger: ACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGG...AAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp CCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAGCCTCCAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 4 (lower is better)
Translates to: PKTLRPPPSAGETHKEASNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...GGAGGCTTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTTTATCACCTAAGACCCTaGGACCCCCACCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSTSEYTDFRGPPAWHVLYHLRP*DPHPLQ
Trigger: CTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATA...AAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGCCGGAGTTCTGGCTCTaGTGTAGGAAGCCCGGTACG +
Preference number: 4 (lower is better)
Translates to: SVQVDGDGDPPRSTQTSGPEFWL*CRKPGT
Trigger: CGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGG...CCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGTGCCACACAGCGGGCTaGCCGGGCCCGGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AQKPQSIFVVGRVVSDCLCHTAG*PGPEFW
Trigger: CCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCA...CAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR GCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCTCCTCCAGACGGTaGCACACAGCGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLSSSRR*HTAGCP
Trigger: CGGGCAGCCCGCTGTGTGGCACCGTCTGGAGGAGCT...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTTGCTGCTAAATCAGGCTaGTGGCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSTSEYTDFRGPPAWHVLAAKSG*WPQAVF
Trigger: GAAGACTGCCTGGGGCCAGCAGCCTGATTTAGCAGC...AAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCGCTGCTAAATCAGGCTaGTGGCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ASCLARSFSPVSPKTLRPAAKSG*WPQAVF
Trigger: GAAGACTGCCTGGGGCCAGCAGCCTGATTTAGCAGC...GGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGTCCAACACTCGGGGCTaGACCCAGGTCATGTGGACT +
Preference number: 4 (lower is better)
Translates to: RTGGWGWRSTSEYTDFRGSNTRG*TQVMWT
Trigger: AGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGA...CCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAGCCTCCTGCTCTTCACATCCGTaGACCAGAACTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PKTLRPPPSAGETHKEASCSSHP*TRTPGG
Trigger: ACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCA...GGAGGCTTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR GCA 90 bp CCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAGCCTCCGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PKTLRPPPSAGETHKEASASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...GGAGGCTTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: WRSTSEYTDFRGPPAWHVASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...AACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ASCLARSFSPVSPKTLRPLQGAS*LARSFS
Trigger: AGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAG...GGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATTGCCGGGCCCGGAGTTCTaGCTCTGCTGTAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: IPTPTQIQCRPSEQPASLPGPEF*LCCRKP
Trigger: GGGCTTCCTACAGCAGAGCCAGAACTCCGGGCCCGG...CAATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTGCTAAATCAGGCTGCTaGCCCCAGGCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: MEIHLGVHRLQGASCLARAKSGC*PQAVFR
Trigger: TCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTAGC...ACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CCAAAGTTAAAAACTCCCTCGCCGAGAAGTCCTGCTAGCCCCAGCGTGAAGGCTCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: PKLKTPSPRSPASPSVKALLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...AGCCTTCACGCTGGGGCTAGCAGGACTTCTCGGCGAGGGAGTTTTTAACTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CCA 90 bp ACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: TGSQPPPKFNVDRLSSQLLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...AAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp AACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: NRNGKDVRTGGWGWRSTSLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...CGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTACAGGTGGATGGGGATaGAGATCCACCTCGGAGTAC +
Preference number: 4 (lower is better)
Translates to: MEIHLGVHRLQGASCLARTGGWG*RSTSEY
Trigger: GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGT...ACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAGCCTCCACAGGTGGATGGGGATaGAGATCCACCTCGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PKTLRPPPSAGETHKEASTGGWG*RSTSEY
Trigger: GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGT...GGAGGCTTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp AGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTTGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCG +
Preference number: 4 (lower is better)
Translates to: RSTSEYTDFRGPPAWHVLVRTGG*GWRSTS
Trigger: CGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC...AAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACCCGGTACGTCCTTCATaGCAGCAGGAAGACCCCCGG +
Preference number: 4 (lower is better)
Translates to: NGKDVRTGGWGWRSTSEYPVRPS*QQEDPR
Trigger: CCGGGGGTCTTCCTGCTGTCATGAAGGACGTACCGG...GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCCGGTACGTCCTTCATaGCAGCAGGAAGACCCCCGG +
Preference number: 4 (lower is better)
Translates to: RCPYRWMGMEIHLGVHRLPVRPS*QQEDPR
Trigger: CCGGGGGTCTTCCTGCTGTCATGAAGGACGTACCGG...AAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACTGCTAGCCCCAGCGTaGAGGCTCTCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSQLHWLQTPLSGESKETLLAPA*RLSPAA
Trigger: AGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAG...TGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCCTGCTAGCCCCAGCGTaGAGGCTCTCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNRNGKDVRTGGWGWRSTLLAPA*RLSPAA
Trigger: AGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAG...GGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGCCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLPGGPR*GCHGPG
Trigger: ACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGG...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCTGCCACACAGCGGGCTaGCCGGGCCCGGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SPVFRARTVCTSDRIPTPCHTAG*PGPEFW
Trigger: CCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCA...GGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGAACCAGGGGGCGTGAAGGCTCTCTCCTaGTGCTCAGACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: CKRLSQVSQRRHDGEPGGVKALS*CSDTGR
Trigger: TCTACCAGTGTCTGAGCAGCAGGAGAGAGCCTTCAC...GCCCCCTGGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CAGCCACTGCCGGTCAGTATTCCTCAGGGACTCCAGCACAGGGTGCATGAGGAGGACTCCAGCACAGGGTaGATGAGGAGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QPLPVSIPQGLQHRVHEEDSSTG*MRSSPK
Trigger: CTTTGGAGAACTCCTCATGCACCCTGTGCTGGAGTC...CTCCTCATGCACCCTGTGCTGGAGTCCCTGAGGAATACTGACCGGCAGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp CATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGAACCCCACCTCGTCTATACTaGCTTTCACCAGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: HWLQTPLSGESKETRRGTPPRLY*LSPAPP
Trigger: CGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGG...GGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGCCACCTCGTCTATACTaGCTTTCACCAGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: VRTGGWGWRSTSEYTDFRPPRLY*LSPAPP
Trigger: CGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGG...CCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCACTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SCLARSFSPVSPKTLRPPLQGAS*LARSFS
Trigger: AGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAG...TGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp GGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTATGAGACCATCTCCTTaGGCAAAGCACGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: GGWGWRSTSEYTDFRGPPMRPSP*AKHGSC
Trigger: GCAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCAT...AGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp GGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCAGTCTTCAGAGTCTaGAACCGCTCTACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GGWGWRSTSEYTDFRGPPAVFRV*NRSTLP
Trigger: TGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGC...AGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp AGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SSQLHWLQTPLSGESKETLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...TGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCG +
Preference number: 4 (lower is better)
Translates to: SFSPVSPKTLRPPPSAGEVRTGG*GWRSTS
Trigger: CGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC...CTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
3UTR CAA 72 bp AACACTCGGGGCTGCACCCAGGTCATGTGGACTCGTTaGTCCACCTCGTCTATACTGCCTTTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: NTRGCTQVMWTR*STSSILPFTSP
Trigger: GGGGCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp ATCCGTGCACCAGAACTCCAGGCGGTCCTTCATTCCCTTGATCTGTTGCAAATCCTGCTAGCCCCAGCGTaGAGGCTCTCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IRAPELQAVLHSLDLLQILLAPA*RLSPAA
Trigger: AGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAG...GATTTGCAACAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTGCACGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp GTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VDGDGDPPRSTQTSGGLLLRCHC*RHRGCQ
Trigger: TTGACACCCTCTATGCCTTCAACAGTGGCAACGTAG...CAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: WRSTSEYTDFRGPPAWHVLRCHC*RHRGCQ
Trigger: TTGACACCCTCTATGCCTTCAACAGTGGCAACGTAG...AACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EQSVLQTGSQPPPKFNVDPGGPR*GCHGPG
Trigger: ACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGG...GTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: DRIPTPTQIQCRPSEQPASMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...AGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TGCCGGTCAGTATTCCTCAGGGACTCCAGCACAGGGTGCATGAGGAGTTCTCCATCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: CRSVFLRDSSTGCMRSSPSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...TGGAGAACTCCTCATGCACCCTGTGCTGGAGTCCCTGAGGAATACTGACCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp GTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: VRTGGWGWRSTSEYTDFRSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...CCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGTATCACCTAAGACCCTaGGACCCCCACCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NRNGKDVRTGGWGWRSTSYHLRP*DPHPLQ
Trigger: CTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATA...CGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACCGGAGTTCTGGCTCTaGTGTAGGAAGCCCGGTACG +
Preference number: 4 (lower is better)
Translates to: SSQLHWLQTPLSGESKETPEFWL*CRKPGT
Trigger: CGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGG...TGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp ACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCTGCCACACAGCGGGCTaGCCGGGCCCGGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TVLFLEQEQSVLQTGSQPCHTAG*PGPEFW
Trigger: CCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCA...GGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATTGCCACACAGCGGGCTaGCCGGGCCCGGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PKTAEHLCSRTRGFRLFDCHTAG*PGPEFW
Trigger: CCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCA...ATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR GCA 90 bp TGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGAGCTCCTCCAGACGGTaGCACACAGCGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: WLPSGTVLFLEQEQSVLQSSSRR*HTAGCP
Trigger: CGGGCAGCCCGCTGTGTGGCACCGTCTGGAGGAGCT...CTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCGACTCCAGCACAGGGTaGATGAGGAGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VQVDGDGDPPRSTQTSGGDSSTG*MRSSPK
Trigger: CTTTGGAGAACTCCTCATGCACCCTGTGCTGGAGTC...GCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGGACTCCAGCACAGGGTaGATGAGGAGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: RTGGWGWRSTSEYTDFRGDSSTG*MRSSPK
Trigger: CTTTGGAGAACTCCTCATGCACCCTGTGCTGGAGTC...CCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CCAAAGTTAAAAACTCCCTCGCCGAGAAGTCCTGCTAGCCCCAGCGTGAAGGCTGCTGCTAAATCAGGCTaGTGGCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PKLKTPSPRSPASPSVKAAAKSG*WPQAVF
Trigger: GAAGACTGCCTGGGGCCAGCAGCCTGATTTAGCAGC...AGCCTTCACGCTGGGGCTAGCAGGACTTCTCGGCGAGGGAGTTTTTAACTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp AGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGCTGCTAAATCAGGCTaGTGGCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SFIGCKRLSQVSQRRHDGAAKSG*WPQAVF
Trigger: GAAGACTGCCTGGGGCCAGCAGCCTGATTTAGCAGC...CCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCTCCAACACTCGGGGCTaGACCCAGGTCATGTGGACT +
Preference number: 4 (lower is better)
Translates to: DVRTGGWGWRSTSEYTDFSNTRG*TQVMWT
Trigger: AGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGA...GAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GTCAAAGGAGACACGACGGGGAACCAGGGGGCCCTAGGTGAGGATGTCATGGGCATTCCCTTGATCTGTTaGAAATCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: VKGDTTGNQGALGEDVMGIPLIC*KSNTRG
Trigger: GCCCCGAGTGTTGGATTTGCAACAGATCAAGGGAAT...GCCCATGACATCCTCACCTAGGGCCCCCTGGTTCCCCGTCGTGTCTCCTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp TCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGCCACCAGCATCTCCATaGTCTTCACATCCGTGCACC +
Preference number: 4 (lower is better)
Translates to: SVQVDGDGDPPRSTQTSGPPASP*SSHPCT
Trigger: GGTGCACGGATGTGAAGAGCATGGAGATGCTGGTGG...CCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR GCA 90 bp TCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCAGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SCLARSFSPVSPKTLRPPASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...TGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AATCCAACACTCGGGGCTGCACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: NPTLGAAPRSCGLVCPPRASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...ACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CCA 90 bp AGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTTGCAGTCTTCAGAGTCTaGAACCGCTCTACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: RSTSEYTDFRGPPAWHVLAVFRV*NRSTLP
Trigger: TGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGC...AAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 4 (lower is better)
Translates to: NRNGKDVRTGGWGWRSTSNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...CGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAATCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: VSPKTLRPPPSAGETHKESMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...TTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp ATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGAACCAAAAGCCACCAGCCTTTaGGCACCGCCGAGCATCAAT +
Preference number: 4 (lower is better)
Translates to: IGCKRLSQVSQRRHDGEPKATSL*APPSIN
Trigger: ATTGATGCTCGGCGGTGCTCAAAGGCTGGTGGCTTT...TGGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431206.6
ENST00000525665.5
CDS-3UTR GCA 90 bp GTCAGTATTCCTCAGGGACTCCAGCACAGGGTGCATGAGGAGTTCTCCAAAGTTCCGGAGTTCTGGCTCTaGTGTAGGAAGCCCGGTACG +
Preference number: 4 (lower is better)
Translates to: VSIPQGLQHRVHEEFSKVPEFWL*CRKPGT
Trigger: CGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGG...AACTTTGGAGAACTCCTCATGCACCCTGTGCTGGAGTCCCTGAGGAATACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp GACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCAGCTCCTCCAGACGGTaGCACACAGCGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: DSPVFRARTVCTSDRIPTSSSRR*HTAGCP
Trigger: CGGGCAGCCCGCTGTGTGGCACCGTCTGGAGGAGCT...GGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGAACCGACTCCAGCACAGGGTaGATGAGGAGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HWLQTPLSGESKETRRGTDSSTG*MRSSPK
Trigger: CTTTGGAGAACTCCTCATGCACCCTGTGCTGGAGTC...GGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACCACCTCGTCTATACTaGCTTTCACCAGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: SSQLHWLQTPLSGESKETPPRLY*LSPAPP
Trigger: CGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGG...TGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACCCACCTCGTCTATACTaGCTTTCACCAGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: KDVRTGGWGWRSTSEYTDPPRLY*LSPAPP
Trigger: CGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGG...GTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACATCCAACACTCGGGGCTaGACCCAGGTCATGTGGACT +
Preference number: 4 (lower is better)
Translates to: SSQLHWLQTPLSGESKETSNTRG*TQVMWT
Trigger: AGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGA...TGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTATTCCCTTGATCTGTTaGAAATCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GGWGWRSTSEYTDFRGPPIPLIC*KSNTRG
Trigger: GCCCCGAGTGTTGGATTTGCAACAGATCAAGGGAAT...AGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR CCA 90 bp GCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGCAGTCTTCAGAGTCTaGAACCGCTCTACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ARSFSPVSPKTLRPPPSAAVFRV*NRSTLP
Trigger: TGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGC...TGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGCAGTCTTCAGAGTCTaGAACCGCTCTACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SVQVDGDGDPPRSTQTSGAVFRV*NRSTLP
Trigger: TGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGC...CCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGCTAAATCAGGCTGCTaGCCCCAGGCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QLHWLQTPLSGESKETRRAKSGC*PQAVFR
Trigger: TCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTAGC...CCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CTATACTGCCTTTCACCAGCCCCACCGAAAGGGCCTTCATCACCAGAAGCTCCAGCTAAATCAGGCTGCTaGCCCCAGGCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LYCLSPAPPKGPSSPEAPAKSGC*PQAVFR
Trigger: TCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTAGC...TGGAGCTTCTGGTGATGAAGGCCCTTTCGGTGGGGCTGGTGAAAGGCAGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CCA 90 bp AACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGCTAAATCAGGCTGCTaGCCCCAGGCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NRNGKDVRTGGWGWRSTSAKSGC*PQAVFR
Trigger: TCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTAGC...CGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTGCCTTTCACCAGCAGGATGTCATGGGCCTaGTGCTCCACCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: TQVMWTRLSTSSILPFTSRMSWA*CSTSIS
Trigger: GGAGATGCTGGTGGAGCACCAGGCCCATGACATCCT...GCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CCA 90 bp GTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGGATGTCATGGGCCTaGTGCTCCACCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VLQTGSQPPPKFNVDRLSRMSWA*CSTSIS
Trigger: GGAGATGCTGGTGGAGCACCAGGCCCATGACATCCT...GCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTAGGATGTCATGGGCCTaGTGCTCCACCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: QTATEKMSVQVDGDGDPPRMSWA*CSTSIS
Trigger: GGAGATGCTGGTGGAGCACCAGGCCCATGACATCCT...AGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ACAGCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTCTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: TAQKPQSIFVVGRVVSDCLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...ACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CCA 90 bp GGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATACAGGTGGATGGGGATaGAGATCCACCTCGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GSQPPPKFNVDRLSSQLHTGGWG*RSTSEY
Trigger: GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGT...ATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGAACCAACAGGTGGATGGGGATaGAGATCCACCTCGGAGTAC +
Preference number: 4 (lower is better)
Translates to: IGCKRLSQVSQRRHDGEPTGGWG*RSTSEY
Trigger: GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGT...TGGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATTGGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCG +
Preference number: 4 (lower is better)
Translates to: IPTPTQIQCRPSEQPASLVRTGG*GWRSTS
Trigger: CGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC...CAATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCATCTGTCTAACTACATaGAGAATGATTTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: GDGDPPRSTQTSGGLLPGICLTT*RMISTR
Trigger: CCTCGTGGAAATCATTCTTCATGTAGTTAGACAGAT...GCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGACACTGGTAGATCCTTaGTGTCAACACAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VDGDGDPPRSTQTSGGLLTLVDP*CQHSPK
Trigger: TTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGT...CAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCCTGCTAGCCCCAGCGTaGAGGCTCTCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPVFRARTVCTSDRIPTPLLAPA*RLSPAA
Trigger: AGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAG...GGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SVQVDGDGDPPRSTQTSGLRCHC*RHRGCQ
Trigger: TTGACACCCTCTATGCCTTCAACAGTGGCAACGTAG...CCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp ACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCAGGGGGCCCTAGGTaGGGATGTCATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TVLFLEQEQSVLQTGSQPPGGPR*GCHGPG
Trigger: ACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGG...GGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: RCPYRWMGMEIHLGVHRLSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...AAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GGCCTGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTATCACCTAAGACCCTaGGACCCCCACCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLAPIRDSPVFRARTVCTYHLRP*DPHPLQ
Trigger: CTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATA...AGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AACACAGCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATCCGGAGTTCTGGCTCTaGTGTAGGAAGCCCGGTACG +
Preference number: 4 (lower is better)
Translates to: NTAQKPQSIFVVGRVVSDPEFWL*CRKPGT
Trigger: CGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGG...ATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGCTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR GCA 90 bp AAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTAGCTCCTCCAGACGGTaGCACACAGCGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: KTAEHLCSRTRGFRLFDSSSSRR*HTAGCP
Trigger: CGGGCAGCCCGCTGTGTGGCACCGTCTGGAGGAGCT...ACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR GCA 90 bp AGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGTGAAGGCTCTCTCCTaGTGCTCAGACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SFIGCKRLSQVSQRRHDGVKALS*CSDTGR
Trigger: TCTACCAGTGTCTGAGCAGCAGGAGAGAGCCTTCAC...CCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CTCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACTGCTCTTCACATCCGTaGACCAGAACTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LKPQRKRCPYRWMGMEIHCSSHP*TRTPGG
Trigger: ACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCA...GTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR GCA 90 bp TGCACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTGCCTTTCACCTGCTCTTCACATCCGTaGACCAGAACTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: CTQVMWTRLSTSSILPFTCSSHP*TRTPGG
Trigger: ACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCA...GGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp CAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCCACCAGCATCTCCATaGTCTTCACATCCGTGCACC +
Preference number: 4 (lower is better)
Translates to: QTATEKMSVQVDGDGDPPPPASP*SSHPCT
Trigger: GGTGCACGGATGTGAAGAGCATGGAGATGCTGGTGG...AGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR GCA 90 bp AGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCCACCAGCATCTCCATaGTCTTCACATCCGTGCACC +
Preference number: 4 (lower is better)
Translates to: RCPYRWMGMEIHLGVHRLPPASP*SSHPCT
Trigger: GGTGCACGGATGTGAAGAGCATGGAGATGCTGGTGG...AAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR GCA 90 bp ATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: MSVQVDGDGDPPRSTQTSASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...TGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp AGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGATGAGACCATCTCCTTaGGCAAAGCACGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SFIGCKRLSQVSQRRHDGMRPSP*AKHGSC
Trigger: GCAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCAT...CCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp AGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTGCTAAATCAGGCTGCTaGCCCCAGGCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RCPYRWMGMEIHLGVHRLAKSGC*PQAVFR
Trigger: TCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTAGC...AAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATTGGCTAAATCAGGCTGCTaGCCCCAGGCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: IPTPTQIQCRPSEQPASLAKSGC*PQAVFR
Trigger: TCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTAGC...CAATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp AGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAACTCCTCCCTGTGGCCTaGCTCCCATCAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: RARTVCTSDRIPTPTQIQLLPVA*LPSGTV
Trigger: GACTGTCCCTGATGGGAGCCAGGCCACAGGGAGGAG...TTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGAACCAGGGGGCCACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: CKRLSQVSQRRHDGEPGGHQEGC*AFLQHL
Trigger: AAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTG...GCCCCCTGGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: VDGDGDPPRSTQTSGGLLHQEGC*AFLQHL
Trigger: AAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTG...CAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp CGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTGGWGWRSTSEYTDFRGMRHNN*IFLRSW
Trigger: CCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCAT...CCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GGCCTGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 4 (lower is better)
Translates to: GLAPIRDSPVFRARTVCTNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...AGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACTATCACCTAAGACCCTaGGACCCCCACCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EQSVLQTGSQPPPKFNVDYHLRP*DPHPLQ
Trigger: CTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATA...GTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CTCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACGACTCCAGCACAGGGTaGATGAGGAGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKPQRKRCPYRWMGMEIHDSSTG*MRSSPK
Trigger: CTTTGGAGAACTCCTCATGCACCCTGTGCTGGAGTC...GTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACGCTGCTAAATCAGGCTaGTGGCCCCAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: EQSVLQTGSQPPPKFNVDAAKSG*WPQAVF
Trigger: GAAGACTGCCTGGGGCCAGCAGCCTGATTTAGCAGC...GTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GGCCTGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTGCTCTTCACATCCGTaGACCAGAACTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GLAPIRDSPVFRARTVCTCSSHP*TRTPGG
Trigger: ACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCA...AGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
CDS-3UTR GCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGCCACCAGCATCTCCATaGTCTTCACATCCGTGCACC +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLPPASP*SSHPCT
Trigger: GGTGCACGGATGTGAAGAGCATGGAGATGCTGGTGG...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
CDS-3UTR GCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGGCCAGCTTCATTGGCTaGAAACGCCTCTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLASFIG*KRLSQV
Trigger: CACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGC...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCAATACACATCACCTGTTaGAAATCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SCLARSFSPVSPKTLRPPIHITC*KSNTRG
Trigger: GCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTAT...TGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS-3UTR CCA 90 bp AGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGAGCAGTCTTCAGAGTCTaGAACCGCTCTACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SQLHWLQTPLSGESKETRAVFRV*NRSTLP
Trigger: TGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGC...TCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCGCAGTCTTCAGAGTCTaGAACCGCTCTACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SNRNGKDVRTGGWGWRSTAVFRV*NRSTLP
Trigger: TGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGC...GGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TGTGGCCTGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTGCTAAATCAGGCTGCTaGCCCCAGGCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CGLAPIRDSPVFRARTVCAKSGC*PQAVFR
Trigger: TCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTAGC...ACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GAACCGCTCTACGTTGCCACTGTTGAAGGCATAGAGGGTGTCAATCAGCCACTGCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: EPLYVATVEGIEGVNQPLLRCHC*RHRGCQ
Trigger: TTGACACCCTCTATGCCTTCAACAGTGGCAACGTAG...CAGTGGCTGATTGACACCCTCTATGCCTTCAACAGTGGCAACGTAGAGCGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp GTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VRTGGWGWRSTSEYTDFRMRHNN*IFLRSW
Trigger: CCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCAT...CCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 4 (lower is better)
Translates to: EQSVLQTGSQPPPKFNVDNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...GTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGAAAGTGAGTTGTCTGTaGTTGGCAGGTCGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SFSPVSPKTLRPPPSAGEKVSCL*LAGRVK
Trigger: TTTCACACGACCTGCCAATCACAGACAACTCACTTT...CTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGGTGAAGGCTCTCTCCTaGTGCTCAGACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLVKALS*CSDTGR
Trigger: TCTACCAGTGTCTGAGCAGCAGGAGAGAGCCTTCAC...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAACCACCTCGTCTATACTaGCTTTCACCAGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: RARTVCTSDRIPTPTQIQPPRLY*LSPAPP
Trigger: CGGTGGGGCTGGTGAAAGGCAGTATAGACGAGGTGG...TTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCCTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LEQEQSVLQTGSQPPPKFLQGAS*LARSFS
Trigger: AGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAG...GAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCACACCAGGCCGGGCCCGGAGTTCTaGCTCTGCTGTAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: IVFTGEIIETTVNRCHTRPGPEF*LCCRKP
Trigger: GGGCTTCCTACAGCAGAGCCAGAACTCCGGGCCCGG...CCTGGTGTGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CCA 90 bp GGCCTGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTATGAGACCATCTCCTTaGGCAAAGCACGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: GLAPIRDSPVFRARTVCTMRPSP*AKHGSC
Trigger: GCAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCAT...AGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp GGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: GGWGWRSTSEYTDFRGPPIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...AGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGAGGATGTCATGGGCCTaGTGCTCCACCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: WLPSGTVLFLEQEQSVLQRMSWA*CSTSIS
Trigger: GGAGATGCTGGTGGAGCACCAGGCCCATGACATCCT...CTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TGCTGCTCAGACACTGGTAGATCCTTGATGTCAACACAGCCCAAAAACCGCAGAACAGGTGGATGGGGATaGAGATCCACCTCGGAGTAC +
Preference number: 4 (lower is better)
Translates to: CCSDTGRSLMSTQPKNRRTGGWG*RSTSEY
Trigger: GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGT...TCTGCGGTTTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTCTGAGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp GGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATACACTGGTAGATCCTTaGTGTCAACACAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GSQPPPKFNVDRLSSQLHTLVDP*CQHSPK
Trigger: TTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGT...ATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLLRCHC*RHRGCQ
Trigger: TTGACACCCTCTATGCCTTCAACAGTGGCAACGTAG...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSQPPPKFNVDRLSSQLHMRHNN*IFLRSW
Trigger: CCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCAT...ATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp CAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 4 (lower is better)
Translates to: QEQSVLQTGSQPPPKFNVNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...GACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAAAGTGAGTTGTCTGTaGTTGGCAGGTCGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: DVRTGGWGWRSTSEYTDFKVSCL*LAGRVK
Trigger: TTTCACACGACCTGCCAATCACAGACAACTCACTTT...GAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGAGCTCCTCCAGACGGTaGCACACAGCGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RLFDSIYWRDHRNDCEPMSSSRR*HTAGCP
Trigger: CGGGCAGCCCGCTGTGTGGCACCGTCTGGAGGAGCT...CATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR GCA 90 bp AGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTCTTTTTACACAGGATCACTaGCTCATCACTACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RSTSEYTDFRGPPAWHVLFTQDH*LITTFH
Trigger: GTGAAAAGTAGTGATGAGGCAGTGATCCTGTGTAAA...AAGAACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATCCAACACTCGGGGCTaGACCCAGGTCATGTGGACT +
Preference number: 4 (lower is better)
Translates to: FLEQEQSVLQTGSQPPPKSNTRG*TQVMWT
Trigger: AGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGA...TTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CTCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACATTCCCTTGATCTGTTaGAAATCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LKPQRKRCPYRWMGMEIHIPLIC*KSNTRG
Trigger: GCCCCGAGTGTTGGATTTGCAACAGATCAAGGGAAT...GTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR GCA 90 bp GTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCATTCCCTTGATCTGTTaGAAATCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: VLQTGSQPPPKFNVDRLSIPLIC*KSNTRG
Trigger: GCCCCGAGTGTTGGATTTGCAACAGATCAAGGGAAT...GCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR GCA 90 bp GTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCACCAGCATCTCCATaGTCTTCACATCCGTGCACC +
Preference number: 4 (lower is better)
Translates to: VLFLEQEQSVLQTGSQPPPPASP*SSHPCT
Trigger: GGTGCACGGATGTGAAGAGCATGGAGATGCTGGTGG...TGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
CDS-3UTR GCA 90 bp AGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAAATGCTCTTCACTCCGTaGACCAGAACTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: RARTVCTSDRIPTPTQIQMLFTP*TRTPGG
Trigger: ACCGCCTGGAGTTCTGGTGCACGGAGTGAAGAGCAT...TTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS-3UTR CCA 90 bp ATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTGGAGAGCCGGGCCCGGAGTTCTaGCTCTGCTGTAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: IFVVGRVVSDCLIVFTGEPGPEF*LCCRKP
Trigger: GGGCTTCCTACAGCAGAGCCAGAACTCCGGGCCCGG...CTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CCA 90 bp ACAGCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTATGAGACCATCTCCTTaGGCAAAGCACGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: TAQKPQSIFVVGRVVSDCMRPSP*AKHGSC
Trigger: GCAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCAT...ACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CCA 90 bp TGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGTGGATGGGGATaGAGATCCACCTCGGAGTAC +
Preference number: 4 (lower is better)
Translates to: WLPSGTVLFLEQEQSVLQTGGWG*RSTSEY
Trigger: GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGT...CTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGCACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: NRNGKDVRTGGWGWRSTSHQEGC*AFLQHL
Trigger: AAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTG...CGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp CAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGCACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: QLHWLQTPLSGESKETRRHQEGC*AFLQHL
Trigger: AAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTG...CCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACACTGGTAGATCCTTaGTGTCAACACAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: NGKDVRTGGWGWRSTSEYTLVDP*CQHSPK
Trigger: TTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGT...GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp CTCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKPQRKRCPYRWMGMEIHMRHNN*IFLRSW
Trigger: CCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCAT...GTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: FLEQEQSVLQTGSQPPPKSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...TTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp ACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCTCAATGTCGACCGTCTaGGCAGCCAGCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: TVLFLEQEQSVLQTGSQPSMSTV*AASFIG
Trigger: GCCAATGAAGCTGGCTGCTCAGACGGTCGACATTGA...GGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GAGATCATAGAAACGACTGTGAACCGATGTCACACCAGGAAGGTTGTTGAGCATAAAGCCACCAGCCTTTaGGCACCGCCGAGCATCAAT +
Preference number: 4 (lower is better)
Translates to: EIIETTVNRCHTRKVVEHKATSL*APPSIN
Trigger: ATTGATGCTCGGCGGTGCTCAAAGGCTGGTGGCTTT...ATGCTCAACAACCTTCCTGGTGTGACATCGGTTCACAGTCGTTTCTATGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525665.5
CDS-3UTR TCA 90 bp ACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGACAAAGGGTTCACCCTaGAATAAAAGCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: TVCTSDRIPTPTQIQCRPTKGSP*NKSHQP
Trigger: AGGCTGGTGGCTTTTATTTCAGGGTGAACCCTTTGT...CGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431206.6
ENST00000525665.5
CDS-3UTR GCA 90 bp CAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGTGAAGGCTCTCTCCTaGTGCTCAGACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QEQSVLQTGSQPPPKFNVVKALS*CSDTGR
Trigger: TCTACCAGTGTCTGAGCAGCAGGAGAGAGCCTTCAC...GACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCAGACTCCAGCACAGGGTaGATGAGGAGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VLFLEQEQSVLQTGSQPPDSSTG*MRSSPK
Trigger: CTTTGGAGAACTCCTCATGCACCCTGTGCTGGAGTC...TGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATGCTCTTCACATCCGTaGACCAGAACTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PSGTVLFLEQEQSVLQTGCSSHP*TRTPGG
Trigger: ACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCA...TCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
CDS-3UTR GCA 90 bp CCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGACCACCAGCATCTCCATaGTCTTCACTCCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PSGTVLFLEQEQSVLQTGPPASP*SSLRAP
Trigger: TGGTGCACGGAGTGAAGAGCATGGAGATGCTGGTGG...TCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS-3UTR CCA 90 bp TCAGACACTGGTAGATCCTTGATGTCAACACAGCCCAAAAACCGCAGAGCATCTATGAGACCATCTCCTTaGGCAAAGCACGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SDTGRSLMSTQPKNRRASMRPSP*AKHGSC
Trigger: GCAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCAT...AGATGCTCTGCGGTTTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CCA 90 bp AAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTGTCCGTACAGGTGGATaGGGATGGAGATCCACCTCG +
Preference number: 4 (lower is better)
Translates to: KTAEHLCSRTRGFRLFDSVRTGG*GWRSTS
Trigger: CGAGGTGGATCTCCATCCCCATCCACCTGTACGGAC...ACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp TCCGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGACCGGTACGTCCTTCATaGCAGCAGGAAGACCCCCGG +
Preference number: 4 (lower is better)
Translates to: SDCLIVFTGEIIETTVNRPVRPS*QQEDPR
Trigger: CCGGGGGTCTTCCTGCTGTCATGAAGGACGTACCGG...TCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525665.5
ENST00000529372.5
CDS-3UTR TCA 90 bp AAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACCACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: KDVRTGGWGWRSTSEYTDHQEGC*AFLQHL
Trigger: AAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTG...GTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp ATCTGTTGCAAATCCAACACTCGGGGCTGCACCCAGGTCATGTGGACTCGTTTGCACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: ICCKSNTRGCTQVMWTRLHQEGC*AFLQHL
Trigger: AAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTG...CAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGACACTGGTAGATCCTTaGTGTCAACACAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLTLVDP*CQHSPK
Trigger: TTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGT...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TCAGACACTGGTAGATCCTTGATGTCAACACAGCCCAAAAACCGCAGAGCATCTCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SDTGRSLMSTQPKNRRASLRCHC*RHRGCQ
Trigger: TTGACACCCTCTATGCCTTCAACAGTGGCAACGTAG...AGATGCTCTGCGGTTTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp GAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACGAAGCTCCACCTCCATaGGGCACAACAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: EQSVLQTGSQPPPKFNVDEAPPP*GTTTEF
Trigger: AAATTCAGTTGTTGTGCCTCATGGAGGTGGAGCTTC...GTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352303.9
CDS-3UTR TCA 90 bp AAGTTAAAAACTCCCTCGCCGAGAAGTCCTGCTAGCCCCAGCGTGAAGGCTCTCAAAGTGAAAAACGGATaGGAGGCTTTTACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KLKTPSPRSPASPSVKALKVKNG*EAFTCV
Trigger: AACACAGGTAAAAGCCTCTCATCCGTTTTTCACTTT...GAGAGCCTTCACGCTGGGGCTAGCAGGACTTCTCGGCGAGGGAGTTTTTAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000525665.5
CDS-3UTR GCA 90 bp GTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTGGAGAGATCATAGAACCGGAGTTCTGGCTCTaGTGTAGGAAGCCCGGTACG +
Preference number: 4 (lower is better)
Translates to: VGRVVSDCLIVFTGEIIEPEFWL*CRKPGT
Trigger: CGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGG...TTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR GCA 90 bp ATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGGAACCATTTACACAGGATCACTaGCTCATCACTACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: IGCKRLSQVSQRRHDGEPFTQDH*LITTFH
Trigger: GTGAAAAGTAGTGATGAGGCAGTGATCCTGTGTAAA...TGGTTCCCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CCAAAGTTAAAAACTCCCTCGCCGAGAAGTCCTGCTAGCCCCAGCGTGAAGGCTTTTACACAGGATCACTaGCTCATCACTACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PKLKTPSPRSPASPSVKAFTQDH*LITTFH
Trigger: GTGAAAAGTAGTGATGAGGCAGTGATCCTGTGTAAA...AGCCTTCACGCTGGGGCTAGCAGGACTTCTCGGCGAGGGAGTTTTTAACTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp AAGTTAAAAACTCCCTCGCCGAGAAGTCCTGCTAGCCCCAGCGTGAAGGCTCTCTTTACACAGGATCACTaGCTCATCACTACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KLKTPSPRSPASPSVKALFTQDH*LITTFH
Trigger: GTGAAAAGTAGTGATGAGGCAGTGATCCTGTGTAAA...GAGAGCCTTCACGCTGGGGCTAGCAGGACTTCTCGGCGAGGGAGTTTTTAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp CAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGTTTACACAGGATCACTaGCTCATCACTACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: QLHWLQTPLSGESKETRRFTQDH*LITTFH
Trigger: GTGAAAAGTAGTGATGAGGCAGTGATCCTGTGTAAA...CCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp AGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGTTTACACAGGATCACTaGCTCATCACTACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SFIGCKRLSQVSQRRHDGFTQDH*LITTFH
Trigger: GTGAAAAGTAGTGATGAGGCAGTGATCCTGTGTAAA...CCCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp TTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAAGTGAAGGCTCTCTCCTaGTGCTCAGACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: FLEQEQSVLQTGSQPPPKVKALS*CSDTGR
Trigger: TCTACCAGTGTCTGAGCAGCAGGAGAGAGCCTTCAC...TTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp CAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATACCACCAGCATCTCCATaGTCTTCACATCCGTGCACC +
Preference number: 4 (lower is better)
Translates to: QKPQSIFVVGRVVSDCLIPPASP*SSHPCT
Trigger: GGTGCACGGATGTGAAGAGCATGGAGATGCTGGTGG...TATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp ATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCACACCAGGCTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IVFTGEIIETTVNRCHTRLQGAS*LARSFS
Trigger: AGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAG...CCTGGTGTGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CCA 90 bp ACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCGCAGTCTTCAGAGTCTaGAACCGCTCTACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TVLFLEQEQSVLQTGSQPAVFRV*NRSTLP
Trigger: TGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGC...GGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTGGAGAGATTCAGCACCGCGGGGATaGCTGCCGGAAATGCTCACT +
Preference number: 4 (lower is better)
Translates to: LCSRTRGFRLFDSIYWRDSAPRG*LPEMLT
Trigger: AGTGAGCATTTCCGGCAGCCATCCCCGCGGTGCTGA...ATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529372.5
CDS-3UTR TCA 90 bp AGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACAATCTGTCTAACTACATaGAGAATGATTTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: SSQLHWLQTPLSGESKETICLTT*RMISTR
Trigger: CCTCGTGGAAATCATTCTTCATGTAGTTAGACAGAT...TGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCTACGTTGCCACTGTTaGAGGCATAGAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SGTVLFLEQEQSVLQTGSLRCHC*RHRGCQ
Trigger: TTGACACCCTCTATGCCTTCAACAGTGGCAACGTAG...GGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NSLYFRQDPNPHPNSMSTMRHNN*IFLRSW
Trigger: CCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCAT...GGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TTGTCTGTGATTGGCAGGTCGTGTGAAAGTCATCTCCATGAGGCACAACAACTGACAAAGGGTTCACCCTaGAATAAAAGCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSVIGRSCESHLHEAQQLTKGSP*NKSHQP
Trigger: AGGCTGGTGGCTTTTATTTCAGGGTGAACCCTTTGT...CAGTTGTTGTGCCTCATGGAGATGACTTTCACACGACCTGCCAATCACAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525665.5
CDS-3UTR GCA 90 bp GTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCACACCAGGAAGGACTCCAGCACAGGGTaGATGAGGAGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VFTGEIIETTVNRCHTRKDSSTG*MRSSPK
Trigger: CTTTGGAGAACTCCTCATGCACCCTGTGCTGGAGTC...CTTCCTGGTGTGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp AGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAACTCCAACACTCGGGGCTaGACCCAGGTCATGTGGACT +
Preference number: 4 (lower is better)
Translates to: RTRGFRLFDSIYWRDHRNSNTRG*TQVMWT
Trigger: AGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGA...GTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp TCCGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGACACCGCGGGGATGGCTaGCGGAAATGCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: SDCLIVFTGEIIETTVNRHRGDG*RKCSLT
Trigger: AGTGAGTGAGCATTTCCGGCAGCCATCCCCGCGGTG...TCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529372.5
CDS-3UTR CCA 90 bp AAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATGAGACCATCTCCTTaGGCAAAGCACGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: KTAEHLCSRTRGFRLFDSMRPSP*AKHGSC
Trigger: GCAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCAT...ACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CCA 90 bp AGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGAATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SQLHWLQTPLSGESKETRIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...TCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp CGCGTGGTTTCCGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTAGGATGTCATGGGCCTaGTGCTCCACCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: RVVSDCLIVFTGEIIETTRMSWA*CSTSIS
Trigger: GGAGATGCTGGTGGAGCACCAGGCCCATGACATCCT...AGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp AACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCCACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: NSLYFRQDPNPHPNSMSTHQEGC*AFLQHL
Trigger: AAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTG...GGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp AACCGATGTCACACCAGGAAGGTTGTTGAGCATTTCTTCAACATCTTCAATTGTAACGCCTCTCTCAGGTaGGTCAAAGGAGACACGACG +
Preference number: 4 (lower is better)
Translates to: NRCHTRKVVEHFFNIFNCNASLR*VKGDTT
Trigger: CGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTT...ACAATTGAAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGTGACATCGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAAAGTGAAAAACGGATaGGAGGCTTTTACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLKVKNG*EAFTCV
Trigger: AACACAGGTAAAAGCCTCTCATCCGTTTTTCACTTT...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000431206.6
ENST00000525665.5
CDS-3UTR GCA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGTTTACACAGGATCACTaGCTCATCACTACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLFTQDH*LITTFH
Trigger: GTGAAAAGTAGTGATGAGGCAGTGATCCTGTGTAAA...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: CTSDRIPTPTQIQCRPSEIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...CTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACATCTGTCTAACTACATaGAGAATGATTTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: EQSVLQTGSQPPPKFNVDICLTT*RMISTR
Trigger: CCTCGTGGAAATCATTCTTCATGTAGTTAGACAGAT...GTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCACACTGGTAGATCCTTaGTGTCAACACAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SGTVLFLEQEQSVLQTGSTLVDP*CQHSPK
Trigger: TTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGT...GGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp ACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCACACTGGTAGATCCTTaGTGTCAACACAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TVLFLEQEQSVLQTGSQPTLVDP*CQHSPK
Trigger: TTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGT...GGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp GACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: DSPVFRARTVCTSDRIPTMRHNN*IFLRSW
Trigger: CCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCAT...GGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAAAAAGTGAGTTGTCTGTaGTTGGCAGGTCGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: FLEQEQSVLQTGSQPPPKKVSCL*LAGRVK
Trigger: TTTCACACGACCTGCCAATCACAGACAACTCACTTT...TTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp CCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGAAAAGTGAGTTGTCTGTaGTTGGCAGGTCGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: PSGTVLFLEQEQSVLQTGKVSCL*LAGRVK
Trigger: TTTCACACGACCTGCCAATCACAGACAACTCACTTT...TCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR GCA 90 bp GTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAGTGAAGGCTCTCTCCTaGTGCTCAGACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VGRVVSDCLIVFTGEIIEVKALS*CSDTGR
Trigger: TCTACCAGTGTCTGAGCAGCAGGAGAGAGCCTTCAC...TTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp TTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCACTTCAGGGGGCCTCCTaGCTGGCACGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LFDSIYWRDHRNDCEPMSLQGAS*LARSFS
Trigger: AGAGAAAGAACGTGCCAGGCAGGAGGCCCCCTGAAG...TGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp AGCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGTTTCACAGGATCACTaGCTCATCACTACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SPKTAEHLCSRTRGFRLFVSQDH*LITTFH
Trigger: GTGAAAAGTAGTGATGAGGCAGTGATCCTGTGAAAC...AAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529372.5
CDS-3UTR TCA 90 bp GGAGAGATCATAGAAACGACTGTGAACCGATGTCACACCAGGAAGGTTGTTGAGATCTGTCTAACTACATaGAGAATGATTTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: GEIIETTVNRCHTRKVVEICLTT*RMISTR
Trigger: CCTCGTGGAAATCATTCTTCATGTAGTTAGACAGAT...CTCAACAACCTTCCTGGTGTGACATCGGTTCACAGTCGTTTCTATGATCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR TCA 90 bp ACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TAEHLCSRTRGFRLFDSIMRHNN*IFLRSW
Trigger: CCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCAT...AATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR TCA 90 bp AGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAATCTGTCTAACTACATaGAGAATGATTTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RDSPVFRARTVCTSDRIPICLTT*RMISTR
Trigger: CCTCGTGGAAATCATTCTTCATGTAGTTAGACAGAT...TGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SGTVLFLEQEQSVLQTGSIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...GGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp ACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: TVLFLEQEQSVLQTGSQPIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...GGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CCA 90 bp TTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAAATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: FLEQEQSVLQTGSQPPPKIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...TTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR TCA 90 bp TTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCACACCACACTGGTAGATCCTTaGTGTCAACACAGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LIVFTGEIIETTVNRCHTTLVDP*CQHSPK
Trigger: TTTTGGGCTGTGTTGACATCAAGGATCTACCAGTGT...GGTGTGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
3UTR CAA 72 bp GCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGGAGAGATCATAGAAAC +
Preference number: 4 (lower is better)
Translates to: AEHLCSRTRGFR*FDSIYWRDHRN
Trigger: GTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR TCA 90 bp GCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACATCTGTCTAACTACATaGAGAATGATTTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: AEHLCSRTRGFRLFDSIYICLTT*RMISTR
Trigger: CCTCGTGGAAATCATTCTTCATGTAGTTAGACAGAT...GTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR TCA 90 bp ATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTGGAGAGCACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: IFVVGRVVSDCLIVFTGEHQEGC*AFLQHL
Trigger: AAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTG...CTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR TCA 90 bp TTCCGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGAAAGTGAGTTGTCTGTaGTTGGCAGGTCGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: FRLFDSIYWRDHRNDCEPKVSCL*LAGRVK
Trigger: TTTCACACGACCTGCCAATCACAGACAACTCACTTT...CGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR GCA 90 bp TTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCAATTCCCTTGATCTGTTaGAAATCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LFDSIYWRDHRNDCEPMSIPLIC*KSNTRG
Trigger: GCCCCGAGTGTTGGATTTGCAACAGATCAAGGGAAT...TGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CCA 90 bp TGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCACATTTTCCTCAGAAGCTaGGCTTCATTAGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: CLIVFTGEIIETTVNRCHIFLRS*ASLAAK
Trigger: TTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAAT...GTGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS GCA 90 bp AGACGGTGCCACACAGCGGGCTGCCCGGGCCCGGAGTTCTGGCTCTaGTGTAGGAAGCCCGGTACGTCCTTCATGACAGCAGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: RRCHTAGCPGPEFWL*CRKPGTSFMTAGRP
Trigger: GGGTCTTCCTGCTGTCATGAAGGACGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCACCGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352303.9
ENST00000431206.6
ENST00000525665.5
ENST00000527047.5
ENST00000528906.5
ENST00000529372.5
ENST00000532097.6
ENST00000534590.5
ENST00000621534.4
CDS CCA 90 bp TCCTCCAGACGGTGCCACACAGCGGGCTGCCCGGGCCCGGAGTTCTaGCTCTGCTGTAGGAAGCCCGGTACGTCCTTCATGACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSRRCHTAGCPGPEF*LCCRKPGTSFMTAG
Trigger: TCCTGCTGTCATGAAGGACGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTGGCACCGTCTGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000527047.5
ENST00000528906.5
ENST00000529372.5
ENST00000532097.6
ENST00000534590.5
ENST00000621534.4
CDS TCA 90 bp GCCCGGAGTTCTGGCTCTGCTGTAGGAAGCCCGGTACGTCCTTCATaGCAGCAGGAAGACCCCCGGCACAGAAGAACAACCGGGATGTCA +
Preference number: 5 (lower is better)
Translates to: ARSSGSAVGSPVRPS*QQEDPRHRRTTGMS
Trigger: TGACATCCCGGTTGTTCTTCTGTGCCGGGGGTCTTCCTGCTGTCATGAAGGACGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000431206.6
ENST00000525665.5
ENST00000527047.5
ENST00000528906.5
ENST00000529372.5
ENST00000532097.6
ENST00000534590.5
ENST00000621534.4
CDS TCA 90 bp AAGGAAGGTGGTGAAGAGAGCGGCGCACAGCAGAAGCAGCACCACTaGAAGCTCACACTGCTCAGCACAGGCTTGGAGAGTGCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: KEGGEESGAQQKQHH*KLTLLSTGLESAAP
Trigger: GGGCGCTGCACTCTCCAAGCCTGTGCTGAGCAGTGTGAGCTTTCAGTGGTGCTGCTTCTGCTGTGCGCCGCTCTCTTCACCACCTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS GCA 90 bp CCCTCGCCGAGAAGTCCTGCTAGCCCCAGCGTGAAGGCTCTCTCCTaGTGCTCAGACACTATGGTAGCAACACAGGCCCACTTACAATCC +
Preference number: 5 (lower is better)
Translates to: PSPRSPASPSVKALS*CSDTMVATQAHLQS
Trigger: GGATTGTAAGTGGGCCTGTGTTGCTACCATAGTGTCTGAGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAGGACTTCTCGGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533717.5
CDS TCA 90 bp GCTCACACTGCTCAGCACAGGCTTGGAGAGTGCAGCGCCCCCACCTaGCCAAAATCTGAAACCACAGACAAAGTGGCTCCTGGGTGTTCG +
Preference number: 5 (lower is better)
Translates to: AHTAQHRLGECSAPT*PKSETTDKVAPGCS
Trigger: CGAACACCCAGGAGCCACTTTGTCTGTGGTTTCAGATTTTGGTCAGGTGGGGGCGCTGCACTCTCCAAGCCTGTGCTGAGCAGTGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS CCA 90 bp TCAGCTACAGGGATTTCACGTGCCCTTTATTCTGCAGCAGAGGGGTaGGCGGGGAGGGCTCAGAAGGTGTTGGCGTCATGGTGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: SATGISRALYSAAEG*AGRAQKVLASWCFL
Trigger: TAGGAAGCACCATGACGCCAACACCTTCTGAGCCCTCCCCGCCCACCCCTCTGCTGCAGAATAAAGGGCACGTGAAATCCCTGTAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527047.5
CDS-3UTR CAA 90 bp ATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTAATGAGACCATCTCCTaGGGCAAAGCACGGATCCTG +
Preference number: 5 (lower is better)
Translates to: MEIHLGVHRLQGASCLARNETIS*GKARIL
Trigger: CAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCATT...ACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS GCA 90 bp GCACAGCGCTCACACAAGAGCCTTGACTCCTCCATGTGGCAGCTTTaGTGCTCTAACACCCTGAGCCTAGGGACCGTACCTCATTCACTG +
Preference number: 5 (lower is better)
Translates to: AQRSHKSLDSSMWQL*CSNTLSLGTVPHSL
Trigger: CAGTGAATGAGGTACGGTCCCTAGGCTCAGGGTGTTAGAGCAGCAAAGCTGCCACATGGAGGAGTCAAGGCTCTTGTGTGAGCGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527982.1
ENST00000529679.1
CDS GCA 90 bp TCATGGGCCTGGTGCTCCACCAGCATCTCCATGCTCTTCACTCCGTaGACCAGAACTCCAGGCGGTCCTTCCTTGATACACATCACCTGT +
Preference number: 5 (lower is better)
Translates to: SWAWCSTSISMLFTP*TRTPGGPSLIHITC
Trigger: ACAGGTGATGTGTATCAAGGAAGGACCGCCTGGAGTTCTGGTGCACGGAGTGAAGAGCATGGAGATGCTGGTGGAGCACCAGGCCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS-3UTR CAA 90 bp ATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTGTCATGTGGACTCGTTaGTCCACCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: MEIHLGVHRLQGASCLARVMWTR*STSSIL
Trigger: CAGTATAGACGAGGTGGACAAACGAGTCCACATGAC...ACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS CCA 90 bp ATCACCTGTTGCAAATCCAACACTCGGGGCTGCACCCAGGTCATGTaGACTCGTTTGTCCACCTCGTCTATACTGCCTTTCACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ITCCKSNTRGCTQVM*TRLSTSSILPFTSP
Trigger: GGGGCTGGTGAAAGGCAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527982.1
ENST00000621534.4
CDS-3UTR CAA 90 bp CCAGCATCTCCATGCTCTTCACATCCGTGCACCAGAACTCCAGGCGGTCCTTCAAATGAGACCATCTCCTaGGGCAAAGCACGGATCCTG +
Preference number: 5 (lower is better)
Translates to: PASPCSSHPCTRTPGGPSNETIS*GKARIL
Trigger: CAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCATT...TGAAGGACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCATGGAGATGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CAA 90 bp GGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGACACTGGTAGATCCTaGATGTCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: GGWGWRSTSEYTDFRGPPDTGRS*MSTQPK
Trigger: TTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTC...AGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCGTCATGTGGACTCGTTaGTCCACCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: ASCLARSFSPVSPKTLRPVMWTR*STSSIL
Trigger: CAGTATAGACGAGGTGGACAAACGAGTCCACATGAC...GGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp CCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAGCCTCCCGGTCCTTCATTCCCTaGATCTGTTGCAAATCCAAC +
Preference number: 5 (lower is better)
Translates to: PKTLRPPPSAGETHKEASRSFIP*ICCKSN
Trigger: GTTGGATTTGCAACAGATCAAGGGAATGAAGGACCG...GGAGGCTTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR CAA 90 bp GTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAAATGAGACCATCTCCTaGGGCAAAGCACGGATCCTG +
Preference number: 5 (lower is better)
Translates to: VSPKTLRPPPSAGETHKENETIS*GKARIL
Trigger: CAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCATT...TTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp GGGGCCCTAGGTGAGGATGTCATGGGCCTGGTGCTCCACCAGCATCTCCATGCTACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: GALGEDVMGLVLHQHLHATPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...AGCATGGAGATGCTGGTGGAGCACCAGGCCCATGACATCCTCACCTAGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CAA 90 bp GGGGCCCTAGGTGAGGATGTCATGGGCCTGGTGCTCCACCAGCATCTCCATGCTACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 5 (lower is better)
Translates to: GALGEDVMGLVLHQHLHATRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...AGCATGGAGATGCTGGTGGAGCACCAGGCCCATGACATCCTCACCTAGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CAA 90 bp GGGTGTCAATCAGCCACTGCCGGTCAGTATTCCTCAGGGACTCCAGCACAGGGTGACACTGGTAGATCCTaGATGTCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: GCQSATAGQYSSGTPAQGDTGRS*MSTQPK
Trigger: TTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTC...ACCCTGTGCTGGAGTCCCTGAGGAATACTGACCGGCAGTGGCTGATTGACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CAA 90 bp GCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCCCACCCTCTGCACATTCCCTTGATCTGTaGCAAATCCAACACTCGGGG +
Preference number: 5 (lower is better)
Translates to: ARSFSPVSPKTLRPPPSAHSLDL*QIQHSG
Trigger: CCCCGAGTGTTGGATTTGCAACAGATCAAGGGAATG...TGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR CAA 90 bp GTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGTTCTTCAAAAGTGAGTaGTCTGTGATTGGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: VDGDGDPPRSTQTSGGLLFFKSE*SVIGRS
Trigger: CGACCTGCCAATCACAGACAACTCACTTTTGAAGAA...CAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp CCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAAGCCTCCTTCTTCAAAAGTGAGTaGTCTGTGATTGGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PKTLRPPPSAGETHKEASFFKSE*SVIGRS
Trigger: CGACCTGCCAATCACAGACAACTCACTTTTGAAGAA...GGAGGCTTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp TCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCAAAAGCCACCAGCCTTaGAGCACCGCCGAGCATCAA +
Preference number: 5 (lower is better)
Translates to: SNRNGKDVRTGGWGWRSTKSHQP*STAEHQ
Trigger: TTGATGCTCGGCGGTGCTCAAAGGCTGGTGGCTTTT...GGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431206.6
ENST00000525665.5
CDS-3UTR CAA 90 bp GTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: VDGDGDPPRSTQTSGGLLTPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...CAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp TGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGCCTCCTGCCTGGCACGTTACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 5 (lower is better)
Translates to: WRSTSEYTDFRGPPAWHVTRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...AACGTGCCAGGCAGGAGGCCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp CAGCCCCACCGAAAGGGCCTTCATCACCAGAAGCTCCACCTCATTCACTGTGATGTCATGTGGACTCGTTaGTCCACCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: QPHRKGLHHQKLHLIHCDVMWTR*STSSIL
Trigger: CAGTATAGACGAGGTGGACAAACGAGTCCACATGAC...ATCACAGTGAATGAGGTGGAGCTTCTGGTGATGAAGGCCCTTTCGGTGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CAA 90 bp AACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGTCATGTGGACTCGTTaGTCCACCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: NRNGKDVRTGGWGWRSTSVMWTR*STSSIL
Trigger: CAGTATAGACGAGGTGGACAAACGAGTCCACATGAC...CGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp CAGCCCCACCGAAAGGGCCTTCATCACCAGAAGCTCCACCTCATTCACTGTGATCATTCCCTTGATCTGTaGCAAATCCAACACTCGGGG +
Preference number: 5 (lower is better)
Translates to: QPHRKGLHHQKLHLIHCDHSLDL*QIQHSG
Trigger: CCCCGAGTGTTGGATTTGCAACAGATCAAGGGAATG...ATCACAGTGAATGAGGTGGAGCTTCTGGTGATGAAGGCCCTTTCGGTGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CAA 90 bp GTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAGAACATTCCCTTGATCTGTaGCAAATCCAACACTCGGGG +
Preference number: 5 (lower is better)
Translates to: VSPKTLRPPPSAGETHKEHSLDL*QIQHSG
Trigger: CCCCGAGTGTTGGATTTGCAACAGATCAAGGGAATG...TTCTTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS TCA 90 bp ACATCCGTGCACCAGAACTCCAGGCGGTCCTTCATTCCCTTGATCTaGAATGGAAATCCGGACACAAGGGACGTTAAGACACGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TSVHQNSRRSFIPLI*NGNPDTRDVKTRRR
Trigger: TCTCCTGCGTGTCTTAACGTCCCTTGTGTCCGGATTTCCATTTCAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTGCACGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS GCA 90 bp CCTTCCTTGATACACATCACCTGTTGCAAATCCAACACTCGGGGCTaGACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: PSLIHITCCKSNTRG*TQVMWTRLSTSSIL
Trigger: CAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTATCAAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS-3UTR CAA 90 bp CCCGTATCACCTAAGACCCTGAGACCCCCACCCTCTGCAGGAGAGACCCACAAAACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: PVSPKTLRPPPSAGETHKTPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...TTTGTGGGTCTCTCCTGCAGAGGGTGGGGGTCTCAGGGTCTTAGGTGATACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGCACGTTCTTTCTCTCCCGTATCACCTAAGACCCTGAGACCCACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 5 (lower is better)
Translates to: ASCLARSFSPVSPKTLRPTRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...GGGTCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCAGGCAGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp CGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCAGGGGGACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 5 (lower is better)
Translates to: RTGGWGWRSTSEYTDFRGTRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...CCCCCTGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp GGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATGACACTGGTAGATCCTaGATGTCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: GSQPPPKFNVDRLSSQLHDTGRS*MSTQPK
Trigger: TTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTC...ATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp GATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCGACACTGGTAGATCCTaGATGTCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: DVRTGGWGWRSTSEYTDFDTGRS*MSTQPK
Trigger: TTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTC...GAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp CAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACGACGGGACACTGGTAGATCCTaGATGTCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: QLHWLQTPLSGESKETRRDTGRS*MSTQPK
Trigger: TTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTC...CCGTCGTGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp ACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTGACACTGGTAGATCCTaGATGTCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: TGSQPPPKFNVDRLSSQLDTGRS*MSTQPK
Trigger: TTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTC...AAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp CAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTGTCATGTGGACTCGTTaGTCCACCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: QTATEKMSVQVDGDGDPPVMWTR*STSSIL
Trigger: CAGTATAGACGAGGTGGACAAACGAGTCCACATGAC...AGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp AGCAGCCAGCTTCATTGGCTGCAAACGCCTCTCTCAGGTGAGTCAAAGGAGACACATTCCCTTGATCTGTaGCAAATCCAACACTCGGGG +
Preference number: 5 (lower is better)
Translates to: SSQLHWLQTPLSGESKETHSLDL*QIQHSG
Trigger: CCCCGAGTGTTGGATTTGCAACAGATCAAGGGAATG...TGTCTCCTTTGACTCACCTGAGAGAGGCGTTTGCAGCCAATGAAGCTGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS TCA 90 bp TCTTCACATCCGTGCACCAGAACTCCAGGCGGTCCTTCATTCCCTTaGTCTGAAATGGAAATCCGGACACAAGGGACGTTAAGACACGCA +
Preference number: 5 (lower is better)
Translates to: SSHPCTRTPGGPSFP*SEMEIRTQGTLRHA
Trigger: TGCGTGTCTTAACGTCCCTTGTGTCCGGATTTCCATTTCAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTGCACGGATGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS GCA 90 bp ATGGGTTTCAAACACATCACCTGTTGCAAATCCAACACTCGGGGCTaGACCCAGGTCATGTGGACTCGTTTGTCCACCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: MGFKHITCCKSNTRG*TQVMWTRLSTSSIL
Trigger: CAGTATAGACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTTTGAAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS-3UTR CAA 90 bp AACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCAATGAGACCATCTCCTaGGGCAAAGCACGGATCCTG +
Preference number: 5 (lower is better)
Translates to: NSLYFRQDPNPHPNSMSTNETIS*GKARIL
Trigger: CAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCATT...GGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp GACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: DRIPTPTQIQCRPSEQPATPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...AGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp AAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACGACACTGGTAGATCCTaGATGTCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: KDVRTGGWGWRSTSEYTDDTGRS*MSTQPK
Trigger: TTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTC...GTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp ATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCACGGTCCTTCATTCCCTaGATCTGTTGCAAATCCAAC +
Preference number: 5 (lower is better)
Translates to: MSVQVDGDGDPPRSTQTSRSFIP*ICCKSN
Trigger: GTTGGATTTGCAACAGATCAAGGGAATGAAGGACCG...TGAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR CAA 90 bp AACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACCGGTCCTTCATTCCCTaGATCTGTTGCAAATCCAAC +
Preference number: 5 (lower is better)
Translates to: NGKDVRTGGWGWRSTSEYRSFIP*ICCKSN
Trigger: GTTGGATTTGCAACAGATCAAGGGAATGAAGGACCG...GTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR CAA 90 bp GATGTCCGTACAGGTGGATGGGGATGGAGATCCACCTCGGAGTACACAGACTTCTTCTTCAAAAGTGAGTaGTCTGTGATTGGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: DVRTGGWGWRSTSEYTDFFFKSE*SVIGRS
Trigger: CGACCTGCCAATCACAGACAACTCACTTTTGAAGAA...GAAGTCTGTGTACTCCGAGGTGGATCTCCATCCCCATCCACCTGTACGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp GGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCAGCCAGCTTCATTTCTTCAAAAGTGAGTaGTCTGTGATTGGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: GSQPPPKFNVDRLSSQLHFFKSE*SVIGRS
Trigger: CGACCTGCCAATCACAGACAACTCACTTTTGAAGAA...ATGAAGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp AGCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTAATGAGACCATCTCCTaGGGCAAAGCACGGATCCTG +
Preference number: 5 (lower is better)
Translates to: SPKTAEHLCSRTRGFRLFNETIS*GKARIL
Trigger: CAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCATT...AAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CAA 90 bp TGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGAGCGGTCCTTCATTCCCTaGATCTGTTGCAAATCCAAC +
Preference number: 5 (lower is better)
Translates to: CTSDRIPTPTQIQCRPSERSFIP*ICCKSN
Trigger: GTTGGATTTGCAACAGATCAAGGGAATGAAGGACCG...CTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR CAA 90 bp TCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCAAAAGCCACCAGCCTTaGAGCACCGCCGAGCATCAA +
Preference number: 5 (lower is better)
Translates to: SGTVLFLEQEQSVLQTGSKSHQP*STAEHQ
Trigger: TTGATGCTCGGCGGTGCTCAAAGGCTGGTGGCTTTT...GGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431206.6
ENST00000525665.5
CDS-3UTR CAA 90 bp AGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCCGGTCCTTCATTCCCTaGATCTCCATGAGGCACAAC +
Preference number: 5 (lower is better)
Translates to: SPVFRARTVCTSDRIPTPRSFIP*ISMRHN
Trigger: GTTGTGCCTCATGGAGATCAAGGGAATGAAGGACCG...GGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000526783.1
CDS TCA 90 bp AAAGTGGCTCCTGGGTGTTCGCTTACCTCCATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGGGCTTCATTAGCTGCTAAATCAGGC +
Preference number: 5 (lower is better)
Translates to: KVAPGCSLTSMRHNN*IFLRSWASLAAKSG
Trigger: GCCTGATTTAGCAGCTAATGAAGCCCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCATGGAGGTAAGCGAACACCCAGGAGCCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS-3UTR CAA 90 bp TCAAACCGCAACGGAAAAGATGTCCGTACAGGTGGATGGGGATGGAGATCCACCACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 5 (lower is better)
Translates to: SNRNGKDVRTGGWGWRSTTRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...GGTGGATCTCCATCCCCATCCACCTGTACGGACATCTTTTCCGTTGCGGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp CAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGTCATGTGGACTCGTTaGTCCACCTCGTCTATACTG +
Preference number: 5 (lower is better)
Translates to: QEQSVLQTGSQPPPKFNVVMWTR*STSSIL
Trigger: CAGTATAGACGAGGTGGACAAACGAGTCCACATGAC...GACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp GTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCCCCAGATACACATCACCTGTaGCAAATCCAACACTCGGGG +
Preference number: 5 (lower is better)
Translates to: VLFLEQEQSVLQTGSQPPDTHHL*QIQHSG
Trigger: CCCCGAGTGTTGGATTTGCAACAGGTGATGTGTATC...TGGGGGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS TCA 90 bp GAGGAAATCCACAGGATCGCATTTCCAGCAAATGTAAGAGCGACGTaGGCTCAAATCACAGAACCAGGAACGTATCTGATCAGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: EEIHRIAFPANVRAT*AQITEPGTYLIRAP
Trigger: AGGAGCTCTGATCAGATACGTTCCTGGTTCTGTGATTTGAGCTCACGTCGCTCTTACATTTGCTGGAAATGCGATCCTGTGGATTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS-3UTR CAA 90 bp GGCCTGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 5 (lower is better)
Translates to: GLAPIRDSPVFRARTVCTTRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...AGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp TCTGTACTTCAGACAGGATCCCAACCCCCACCCAAATTCAATGTCGACCGTCTGACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 5 (lower is better)
Translates to: SVLQTGSQPPPKFNVDRLTRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...CAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCCTGTCTGAAGTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp AGCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGACACTGGTAGATCCTaGATGTCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: SPKTAEHLCSRTRGFRLFDTGRS*MSTQPK
Trigger: TTTGGGCTGTGTTGACATCAAGGATCTACCAGTGTC...AAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CAA 90 bp TCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCATTCCCTTGATCTGTaGCAAATCCAACACTCGGGG +
Preference number: 5 (lower is better)
Translates to: SGTVLFLEQEQSVLQTGSHSLDL*QIQHSG
Trigger: CCCCGAGTGTTGGATTTGCAACAGATCAAGGGAATG...GGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000532097.6
CDS-3UTR CAA 90 bp AACACAGCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: NTAQKPQSIFVVGRVVSDTPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...ATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGCTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CAA 90 bp TGGCTCCCATCAGGGACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: WLPSGTVLFLEQEQSVLQTPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...CTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTCCCTGATGGGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS-3UTR CAA 90 bp AGCCCAAAAACCGCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTCTTCAACATCTTCAATaGTTTCACAGGATCACTGCC +
Preference number: 5 (lower is better)
Translates to: SPKTAEHLCSRTRGFRLFLQHLQ*FHRITA
Trigger: GGCAGTGATCCTGTGAAACAATTGAAGATGTTGAAG...AAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGCGGTTTTTGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529372.5
CDS-3UTR CAA 90 bp GACAGTCCTGTTTTTAGAGCAAGAACAGTCTGTACTTCAGACAGGATCCCAACCACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: DSPVFRARTVCTSDRIPTTPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...GGTTGGGATCCTGTCTGAAGTACAGACTGTTCTTGCTCTAAAAACAGGACTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000526783.1
ENST00000532097.6
ENST00000621534.4
CDS TCA 90 bp AATACCTGTGGCTTAGGTAACAGTGAGGGACTGGAGAAGGGACAGTaGAGGAGCGAGGAGGAATTAGCCTCATTTTCATGTAAATTAAAT +
Preference number: 5 (lower is better)
Translates to: NTCGLGNSEGLEKGQ*RSEEELASFSCKLN
Trigger: ATTTAATTTACATGAAAATGAGGCTAATTCCTCCTCGCTCCTTCACTGTCCCTTCTCCAGTCCCTCACTGTTACCTAAGCCACAGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527047.5
CDS TCA 90 bp GATCATAGAAACGACTGTGAACCGATGTCACACCAGGAAGGTTGTTaGGCATTTCTTCAACATCTTCAATTGTTTCACAGGATCACTGCC +
Preference number: 5 (lower is better)
Translates to: DHRNDCEPMSHQEGC*AFLQHLQLFHRITA
Trigger: GGCAGTGATCCTGTGAAACAATTGAAGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGTGACATCGGTTCACAGTCGTTTCTATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529372.5
CDS-3UTR CAA 90 bp GCAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTTCTTCAAAAGTGAGTaGTCTGTGATTGGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: AEHLCSRTRGFRLFDSIYFFKSE*SVIGRS
Trigger: CGACCTGCCAATCACAGACAACTCACTTTTGAAGAA...GTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS-3UTR CAA 90 bp ACGCGTGGTTTCCGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACACACCAGGAAGGTTGTaGAGCATTTCTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: TRGFRLFDSIYWRDHRNDTPGRL*SISSTS
Trigger: AGATGTTGAAGAAATGCTCAACAACCTTCCTGGTGT...GTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CAA 90 bp TTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCACACCACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG +
Preference number: 5 (lower is better)
Translates to: LIVFTGEIIETTVNRCHTTRGFR*FDSIYW
Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...GGTGTGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382671.8
ENST00000525665.5
ENST00000529372.5
CDS-3UTR CAA 90 bp TTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACCGATGTCACGGTCCTTCATTCCCTaGATCTGTTGCAAATCCAAC +
Preference number: 5 (lower is better)
Translates to: LFDSIYWRDHRNDCEPMSRSFIP*ICCKSN
Trigger: GTTGGATTTGCAACAGATCAAGGGAATGAAGGACCG...TGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382671.8
ENST00000525665.5
CDS GCA 72 bp CACACAGCGGGCTGCCCGGGCCCGGAGTTCTGGCTCTaGTGTAGGAAGCCCGGTACGTCCTTCATGACAGCA +
Preference number: 6 (lower is better)
Translates to: HTAGCPGPEFWL*CRKPGTSFMTA
Trigger: TGCTGTCATGAAGGACGTACCGGGCTTCCTACAGCAGAGCCAGAACTCCGGGCCCGGGCAGCCCGCTGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000352303.9
ENST00000382671.8
ENST00000431206.6
ENST00000525665.5
ENST00000527047.5
ENST00000528906.5
ENST00000529372.5
ENST00000532097.6
ENST00000534590.5
ENST00000621534.4
CDS GCA 72 bp GGATGTCATGGGCCTGGTGCTCCACCAGCATCTCCATaGTCTTCACTCCGTGCACCAGAACTCCAGGCGGTC +
Preference number: 6 (lower is better)
Translates to: GCHGPGAPPASP*SSLRAPELQAV
Trigger: GACCGCCTGGAGTTCTGGTGCACGGAGTGAAGAGCATGGAGATGCTGGTGGAGCACCAGGCCCATGACATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS CCA 72 bp GGGATTTCACGTGCCCTTTATTCTGCAGCAGAGGGGTaGGCGGGGAGGGCTCAGAAGGTGTTGGCGTCATGG +
Preference number: 6 (lower is better)
Translates to: GISRALYSAAEG*AGRAQKVLASW
Trigger: CCATGACGCCAACACCTTCTGAGCCCTCCCCGCCCACCCCTCTGCTGCAGAATAAAGGGCACGTGAAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527047.5
CDS TCA 72 bp TCTGGCTCTGCTGTAGGAAGCCCGGTACGTCCTTCATaGCAGCAGGAAGACCCCCGGCACAGAAGAACAACC +
Preference number: 6 (lower is better)
Translates to: SGSAVGSPVRPS*QQEDPRHRRTT
Trigger: GGTTGTTCTTCTGTGCCGGGGGTCTTCCTGCTGTCATGAAGGACGTACCGGGCTTCCTACAGCAGAGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000431206.6
ENST00000525665.5
ENST00000527047.5
ENST00000528906.5
ENST00000529372.5
ENST00000532097.6
ENST00000534590.5
ENST00000621534.4
CDS TCA 72 bp GGTGAAGAGAGCGGCGCACAGCAGAAGCAGCACCACTaGAAGCTCACACTGCTCAGCACAGGCTTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: GEESGAQQKQHH*KLTLLSTGLES
Trigger: ACTCTCCAAGCCTGTGCTGAGCAGTGTGAGCTTTCAGTGGTGCTGCTTCTGCTGTGCGCCGCTCTCTTCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS GCA 72 bp AGAAGTCCTGCTAGCCCCAGCGTGAAGGCTCTCTCCTaGTGCTCAGACACTATGGTAGCAACACAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: RSPASPSVKALS*CSDTMVATQAH
Trigger: GTGGGCCTGTGTTGCTACCATAGTGTCTGAGCAGCAGGAGAGAGCCTTCACGCTGGGGCTAGCAGGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533717.5
CDS TCA 72 bp GCTCAGCACAGGCTTGGAGAGTGCAGCGCCCCCACCTaGCCAAAATCTGAAACCACAGACAAAGTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: AQHRLGECSAPT*PKSETTDKVAP
Trigger: AGGAGCCACTTTGTCTGTGGTTTCAGATTTTGGTCAGGTGGGGGCGCTGCACTCTCCAAGCCTGTGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS CCA 72 bp AGACAAGATAGCCTGACACACCCCCATGGACCCAGATaGCTTGTGAGAAGCAGATGCCGCTCCTCCCGTCAT +
Preference number: 6 (lower is better)
Translates to: RQDSLTHPHGPR*LVRSRCRSSRH
Trigger: ATGACGGGAGGAGCGGCATCTGCTTCTCACAAGCCATCTGGGTCCATGGGGGTGTGTCAGGCTATCTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527982.1
ENST00000529679.1
CDS GCA 72 bp ACTCCAGGCGGTCCTTCCTTGATACACATCACCTGTTaGAAATCCAACACTCGGGGCTGCACCCAGGTCATG +
Preference number: 6 (lower is better)
Translates to: TPGGPSLIHITC*KSNTRGCTQVM
Trigger: CATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTATCAAGGAAGGACCGCCTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS TCA 72 bp AGACAGATGTGCGTGTACACAAGAAGCGACATGCAATaGGGCAACAACTGCATCACGGGGAGAGGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: RQMCVYTRSDMQ*GNNCITGRGAA
Trigger: AGCTGCCCCTCTCCCCGTGATGCAGTTGTTGCCTCATTGCATGTCGCTTCTTGTGTACACGCACATCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS GCA 72 bp GGGAAAGACAGATGTGCGTGTACACAAGAAGCGACATaGAATGAGGCAACAACTGCATCACGGGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GKDRCACTQEAT*NEATTASRGEG
Trigger: CCCCTCTCCCCGTGATGCAGTTGTTGCCTCATTGCATGTCGCTTCTTGTGTACACGCACATCTGTCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS GCA 72 bp AAACACATCACCTGTTGCAAATCCAACACTCGGGGCTaGACCCAGGTCATGTGGACTCGTTTGTCCACCTCG +
Preference number: 6 (lower is better)
Translates to: KHITCCKSNTRG*TQVMWTRLSTS
Trigger: CGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS GCA 72 bp ATACACATCACCTGTTGCAAATCCAACACTCGGGGCTaGACCCAGGTCATGTGGACTCGTTTGTCCACCTCG +
Preference number: 6 (lower is better)
Translates to: IHITCCKSNTRG*TQVMWTRLSTS
Trigger: CGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS CAA 72 bp AACTCCAGGCGGTCCTTCCTTGATACACATCACCTGTaGCAAATCCAACACTCGGGGCTGCACCCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: NSRRSFLDTHHL*QIQHSGLHPGH
Trigger: ATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTATCAAGGAAGGACCGCCTGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621534.4
CDS TCA 72 bp CCGTGCACCAGAACTCCAGGCGGTCCTTCATTCCCTTaGTCTGAAATGGAAATCCGGACACAAGGGACGTTA +
Preference number: 6 (lower is better)
Translates to: PCTRTPGGPSFP*SEMEIRTQGTL
Trigger: TAACGTCCCTTGTGTCCGGATTTCCATTTCAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS CCA 72 bp GGGACAAAGGGTTCACCCTTAATGAGACCATCTCCTTaGGCAAAGCACGGATCCTGCACAAAATCAAGCACC +
Preference number: 6 (lower is better)
Translates to: GTKGSPLMRPSP*AKHGSCTKSST
Trigger: GGTGCTTGATTTTGTGCAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCATTAAGGGTGAACCCTTTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382671.8
CDS TCA 72 bp CCTGGGTGTTCGCTTACCTCCATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGGGCTTCATTAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PGCSLTSMRHNN*IFLRSWASLAA
Trigger: AGCAGCTAATGAAGCCCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCATGGAGGTAAGCGAACACCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS TCA 72 bp CACCAGAACTCCAGGCGGTCCTTCATTCCCTTGATCTaGAATGGAAATCCGGACACAAGGGACGTTAAGACA +
Preference number: 6 (lower is better)
Translates to: HQNSRRSFIPLI*NGNPDTRDVKT
Trigger: TGTCTTAACGTCCCTTGTGTCCGGATTTCCATTTCAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS CAA 72 bp AGGGACAAAGGGTTCACCCTTAATGAGACCATCTCCTaGGGCAAAGCACGGATCCTGCACAAAATCAAGCAC +
Preference number: 6 (lower is better)
Translates to: RDKGFTLNETIS*GKARILHKIKH
Trigger: GTGCTTGATTTTGTGCAGGATCCGTGCTTTGCCCAAGGAGATGGTCTCATTAAGGGTGAACCCTTTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382671.8
CDS CAA 90 bp TCAAAATCCACAGAGGTGAATAATGGGTTTCAAACACATCACCTGTaGCAAATCCAACACTCGGGGCTGCACCCAGGTCATGTGGACTCG +
Preference number: 6 (lower is better)
Translates to: SKSTEVNNGFQTHHL*QIQHSGLHPGHVDS
Trigger: CGAGTCCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTTTGAAACCCATTATTCACCTCTGTGGATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS CAA 72 bp ACAGAGGTGAATAATGGGTTTCAAACACATCACCTGTaGCAAATCCAACACTCGGGGCTGCACCCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: TEVNNGFQTHHL*QIQHSGLHPGH
Trigger: ATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAACAGGTGATGTGTTTGAAACCCATTATTCACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS TCA 72 bp CACAGGATCGCATTTCCAGCAAATGTAAGAGCGACGTaGGCTCAAATCACAGAACCAGGAACGTATCTGATC +
Preference number: 6 (lower is better)
Translates to: HRIAFPANVRAT*AQITEPGTYLI
Trigger: GATCAGATACGTTCCTGGTTCTGTGATTTGAGCTCACGTCGCTCTTACATTTGCTGGAAATGCGATCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS TCA 72 bp CATGGATTTAATGGCCTAGGTTACCTGGTAGATCCTTaGTGTCAACACAGCCCAAAAACCGCAGAGCATCTT +
Preference number: 6 (lower is better)
Translates to: HGFNGLGYLVDP*CQHSPKTAEHL
Trigger: AAGATGCTCTGCGGTTTTTGGGCTGTGTTGACATCAAGGATCTACCAGGTAACCTAGGCCATTAAATCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527047.5
CDS TCA 72 bp TCCTTCATTCCCTTGATCTCCATGAGGCACAACAACTaGATTTTCCTCAGAAGCTGGGCTTCATTAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SFIPLISMRHNN*IFLRSWASLAA
Trigger: AGCAGCTAATGAAGCCCAGCTTCTGAGGAAAATTCAGTTGTTGTGCCTCATGGAGATCAAGGGAATGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526783.1
CDS TCA 72 bp CTCACAGATGCTAAGTTTGGAGAATATGCTCCTGTGTaGCATGGATTTAATGGCCTAGGTTACCTGGTAGAT +
Preference number: 6 (lower is better)
Translates to: LTDAKFGEYAPV*HGFNGLGYLVD
Trigger: ATCTACCAGGTAACCTAGGCCATTAAATCCATGTCACACAGGAGCATATTCTCCAAACTTAGCATCTGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527047.5
CDS TCA 72 bp GACGGTATAGACACAACCCCTCAAAATCCACAGAGGTaGATAATGGGTTTCAAACACATCACCTGTTGCAAA +
Preference number: 6 (lower is better)
Translates to: DGIDTTPQNPQR*IMGFKHITCCK
Trigger: TTTGCAACAGGTGATGTGTTTGAAACCCATTATTCACCTCTGTGGATTTTGAGGGGTTGTGTCTATACCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527982.1
CDS CAA 72 bp AAAACCCAACAGCAGTATTTCCTTCTCCAAAACCTCTaGTCTAATAATGCTGTCTTCCCAAATGGCTTCCAT +
Preference number: 6 (lower is better)
Translates to: KTQQQYFLLQNL*SNNAVFPNGFH
Trigger: ATGGAAGCCATTTGGGAAGACAGCATTATTAGACAAGAGGTTTTGGAGAAGGAAATACTGCTGTTGGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527982.1