Pregenerated sensors for PSMC6 (Homo sapiens)
Ensembl gene IDs: ENSG00000100519Ensembl transcript IDs: ENST00000445930.7, ENST00000553798.5, ENST00000553899.5, ENST00000554044.5, ENST00000555887.5, ENST00000557517.1, ENST00000557557.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCACCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTGCTaGTCCACAAGCTCAGGGCCGGATGACAAAGCGCCTTGTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: CHPGWTGPFLHPKEC*STSSGPDDKAPCPW Trigger: CCAGGGACAAGGCGCTTTGTCATCCGGCCCTGAGCTTGTGGAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR GCA 90 bp | TTCTGTCACCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTaGTGCTCCACAAGCTCAGGGCCGGATGACAAAGCGCCTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: FCHPGWTGPFLHPKE*CSTSSGPDDKAPCP Trigger: GGGACAAGGCGCTTTGTCATCCGGCCCTGAGCTTGTGGAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR CCA 90 bp | GTTCCCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTaGGCCATTTCTACACCCGAAGGAGTGCTGCTCCACAAGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VPLLKAADVLSPGLD*AISTPEGVLLHKLR Trigger: CCTGAGCTTGTGGAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR CAA 90 bp | AGCGCCTTGTCCCTGGCCCTAGGCCTGGTCATCTCTAAGGCTCGGTaGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SALSLALGLVISKAR*PGSAKGFCFVRGRS Trigger: GCTTCTGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGATGACCAGGCCTAGGGCCAGGGACAAGGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTGCTGCTCTCTCTAAGGCTCGGTTaGCGGGCTCGGCGAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: VLSPGLDWAISTPEGVLLSLRLG*RARRKA Trigger: AGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGA...GAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR-3UTR GCA 90 bp | CTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACTCTCTAAGGCTCGGTTaGCGGGCTCGGCGAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LTQGRRCSVTRAGLGHFYSLRLG*RARRKA Trigger: AGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGA...GTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR-3UTR TCA 90 bp | TTTAATTGTTCCCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGAAGCTCAGGGCCGGATaGCAAAGCGCCTTGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: FNCSLTQGRRCSVTRAGLKLRAG*QSALSL Trigger: CAGGGACAAGGCGCTTTGTCATCCGGCCCTGAGCTT...CAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGGGAACAATTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTGCTGCTCAAAGTGAGAGAGAGGTaGACTGTTTCTTTACTAATT | + |
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Preference number: 2 (lower is better) Translates to: VLSPGLDWAISTPEGVLLKVRER*TVSLLI Trigger: AATTAGTAAAGAAACAGTCCACCTCTCTCTCACTTT...GAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553798.5 ENST00000557517.1 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCAGACCTCCACATCCTCAACAGGGACCTATCGTCTTACATAAACCAAGATATGTAAACACTTTCTaGAAGGAGGAGTACAGACAT | + |
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Preference number: 2 (lower is better) Translates to: GSRPPHPQQGPIVLHKPRYVNTF*KEEYRH Trigger: ATGTCTGTACTCCTCCTTTCAGAAAGTGTTTACATA...TCTTGGTTTATGTAAGACGATAGGTCCCTGTTGAGGATGTGGAGGTCTGGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445930.7 |
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| 3UTR-3UTR CCA 90 bp | TTGTCAAGCCACGTTGACAGAGGGTTTAGTTGTATTTCTGTCCTCCAAGGAGACAAAGTGAGAGAGAGGTaGACTGTTTCTTTACTAATT | + |
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Preference number: 2 (lower is better) Translates to: LSSHVDRGFSCISVLQGDKVRER*TVSLLI Trigger: AATTAGTAAAGAAACAGTCCACCTCTCTCTCACTTT...GTCTCCTTGGAGGACAGAAATACAACTAAACCCTCTGTCAACGTGGCTTGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554044.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGTTGTATTTCTGTCCTCCAAGGAGACATTAGTTGAAGGAAAACTTAAGTCTAAAGTGAGAGAGAGGTaGACTGTTTCTTTACTAATT | + |
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Preference number: 2 (lower is better) Translates to: LVVFLSSKETLVEGKLKSKVRER*TVSLLI Trigger: AATTAGTAAAGAAACAGTCCACCTCTCTCTCACTTT...AGACTTAAGTTTTCCTTCAACTAATGTCTCCTTGGAGGACAGAAATACAACTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554044.5 ENST00000557517.1 |
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| 3UTR-3UTR CAA 90 bp | GTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTGCTGCTCATCTCTAAGGCTCGGTaGCCGGGCTCGGCGAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: VLSPGLDWAISTPEGVLLISKAR*PGSAKG Trigger: GCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGAT...GAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR GCA 72 bp | CCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTaGTGCTCCACAAGCTCAGGGCCGGATGACAAAGCG | + |
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Preference number: 3 (lower is better) Translates to: PGWTGPFLHPKE*CSTSSGPDDKA Trigger: CGCTTTGTCATCCGGCCCTGAGCTTGTGGAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR-3UTR CAA 90 bp | CTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACATCTCTAAGGCTCGGTaGCCGGGCTCGGCGAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: LTQGRRCSVTRAGLGHFYISKAR*PGSAKG Trigger: GCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGAT...GTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR CCA 72 bp | CCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTaGACTGGGCCATTTCTACACCCGAAGGAGTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: PYSRPPMFCHPG*TGPFLHPKECC Trigger: GCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR GCA 72 bp | TCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTaGTTTGTCAGAGGCAGAAGCGAGTCGAGGCACTTG | + |
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Preference number: 3 (lower is better) Translates to: SKARLPGSAKGF*FVRGRSESRHL Trigger: CAAGTGCCTCGACTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR-3UTR CAA 90 bp | TTGTTCCCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCACGAAAGGCTTCTGCTTaGTCAGAGGCAGAAGCGAGT | + |
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Preference number: 3 (lower is better) Translates to: LFPYSRPPMFCHPGWTGPRKASA*SEAEAS Trigger: ACTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCG...TGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGGGAACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR-3UTR CAA 90 bp | CTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACCGAAAGGCTTCTGCTTaGTCAGAGGCAGAAGCGAGT | + |
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Preference number: 3 (lower is better) Translates to: LTQGRRCSVTRAGLGHFYRKASA*SEAEAS Trigger: ACTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCG...GTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR-3UTR CAA 90 bp | CGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTGCTCGAAAGGCTTCTGCTTaGTCAGAGGCAGAAGCGAGT | + |
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Preference number: 3 (lower is better) Translates to: RCSVTRAGLGHFYTRRSARKASA*SEAEAS Trigger: ACTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCG...AGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR GCA 90 bp | GGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCAGAAGCGACACCCGAAGGAGTGCTaGTCCACAAGCTCAGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GSVAGLGERLLLCQRQKRHPKEC*STSSGP Trigger: CGGCCCTGAGCTTGTGGAGCAGCACTCCTTCGGGTG...TCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR TCA 90 bp | CTAGGCCTGGTCATCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCAAGCTCAGGGCCGGATaGCAAAGCGCCTTGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGLVISKARLPGSAKGFCKLRAG*QSALSL Trigger: CAGGGACAAGGCGCTTTGTCATCCGGCCCTGAGCTT...GCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGATGACCAGGCCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR GCA 90 bp | CCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTGCTGCTCCACAAGCTCTCTCTAAGGCTCGGTTaGCGGGCTCGGCGAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGLDWAISTPEGVLLHKLSLRLG*RARRKA Trigger: AGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGA...GAGCTTGTGGAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR GCA 90 bp | GGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCAGAAGCGATCTCTAAGGCTCGGTTaGCGGGCTCGGCGAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GSVAGLGERLLLCQRQKRSLRLG*RARRKA Trigger: AGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGA...TCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR GCA 90 bp | GCTCCACAAGCTCAGGGCCGGATGACAAAGCGCCTTGTCCCTGGCCCTAGGCCTCTACACCCGAAGGAGTaGTGCTCCACAAGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: APQAQGRMTKRLVPGPRPLHPKE*CSTSSG Trigger: CCCTGAGCTTGTGGAGCAGCACTCCTTCGGGTGTAG...AGGCCTAGGGCCAGGGACAAGGCGCTTTGTCATCCGGCCCTGAGCTTGTGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CCA 90 bp | GCTCCACAAGCTCAGGGCCGGATGACAAAGCGCCTTGTCCCTGGCCCTAGGCCTTCACCCGGGCTGGACTaGGCCATTTCTACACCCGAA | + |
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Preference number: 4 (lower is better) Translates to: APQAQGRMTKRLVPGPRPSPGLD*AISTPE Trigger: TTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGA...AGGCCTAGGGCCAGGGACAAGGCGCTTTGTCATCCGGCCCTGAGCTTGTGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR GCA 90 bp | TCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCACACCCGAAGGAGTGCTaGTCCACAAGCTCAGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SLRLGCRARRKASALSEAHPKEC*STSSGP Trigger: CGGCCCTGAGCTTGTGGAGCAGCACTCCTTCGGGTG...TGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR GCA 90 bp | CCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTGCTGCTCCACAAGCTCCTACACCCGAAGGAGTaGTGCTCCACAAGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PGLDWAISTPEGVLLHKLLHPKE*CSTSSG Trigger: CCCTGAGCTTGTGGAGCAGCACTCCTTCGGGTGTAG...GAGCTTGTGGAGCAGCACTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CCA 90 bp | CCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGTCACCCGGGCTGGACTaGGCCATTTCTACACCCGAA | + |
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Preference number: 4 (lower is better) Translates to: PPMFCHPGWTGPFLHPKESPGLD*AISTPE Trigger: TTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGA...CTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CCA 90 bp | GCTCAGGGCCGGATGACAAAGCGCCTTGTCCCTGGCCCTAGGCCTGGTCATCTCTTCTGTCACCCGGGCTaGACTGGGCCATTTCTACAC | + |
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Preference number: 4 (lower is better) Translates to: AQGRMTKRLVPGPRPGHLFCHPG*TGPFLH Trigger: GTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAA...GAGATGACCAGGCCTAGGGCCAGGGACAAGGCGCTTTGTCATCCGGCCCTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| 3UTR CAA 72 bp | TCCCTGGCCCTAGGCCTGGTCATCTCTAAGGCTCGGTaGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SLALGLVISKAR*PGSAKGFCFVR Trigger: TCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGATGACCAGGCCTAGGGCCAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CCA 90 bp | GGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCAGAAGCGATTCTGTCACCCGGGCTaGACTGGGCCATTTCTACAC | + |
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Preference number: 4 (lower is better) Translates to: GSVAGLGERLLLCQRQKRFCHPG*TGPFLH Trigger: GTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAA...TCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CCA 90 bp | CCCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTTTCTGTCACCCGGGCTaGACTGGGCCATTTCTACAC | + |
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Preference number: 4 (lower is better) Translates to: PLLKAADVLSPGLDWAISFCHPG*TGPFLH Trigger: GTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAA...AGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR TCA 90 bp | TCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCAGCGAGTCGAGGCACTTaGTTAAATGGAAAGAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLRLGCRARRKASALSEAASRGT*LNGKKG Trigger: ACCTTTCTTTCCATTTAATCAAGTGCCTCGACTCGC...TGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR TCA 90 bp | TTAATTGTTCCCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCGAGTCGAGGCACTTaGTTAAATGGAAAGAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: LIVPLLKAADVLSPGLDWASRGT*LNGKKG Trigger: ACCTTTCTTTCCATTTAATCAAGTGCCTCGACTCGC...CCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGGGAACAATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CCA 90 bp | CTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACAAAGTGAGAGAGAGGTaGACTGTTTCTTTACTAATT | + |
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Preference number: 4 (lower is better) Translates to: LTQGRRCSVTRAGLGHFYKVRER*TVSLLI Trigger: AATTAGTAAAGAAACAGTCCACCTCTCTCTCACTTT...GTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553798.5 ENST00000557517.1 |
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| CDS-3UTR CCA 90 bp | TGGTCATCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAAAAGTGAGAGAGAGGTaGACTGTTTCTTTACTAATT | + |
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Preference number: 4 (lower is better) Translates to: WSSLRLGCRARRKASALSKVRER*TVSLLI Trigger: AATTAGTAAAGAAACAGTCCACCTCTCTCTCACTTT...TGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGATGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553798.5 ENST00000557517.1 |
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| CDS-3UTR TCA 90 bp | CACATCCTCAACAGGGACCTATCGTCTTACATAAACCAAGAAAACCCAGTCACATGTTTTGAACATTTCTaGCACTCCTACATCCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: HILNRDLSSYINQENPVTCFEHF*HSYIPY Trigger: GTAGGGGATGTAGGAGTGTCAGAAATGTTCAAAACA...TGTGACTGGGTTTTCTTGGTTTATGTAAGACGATAGGTCCCTGTTGAGGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445930.7 |
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| CDS-3UTR TCA 90 bp | CCTCAACAGGGACCTATCGTCTTACATAAACCAAGAAAACCCAGTCACATATTATATGTAAACACTTTCTaGAAGGAGGAGTACAGACAT | + |
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Preference number: 4 (lower is better) Translates to: PQQGPIVLHKPRKPSHILYVNTF*KEEYRH Trigger: ATGTCTGTACTCCTCCTTTCAGAAAGTGTTTACATA...TAATATGTGACTGGGTTTTCTTGGTTTATGTAAGACGATAGGTCCCTGTTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445930.7 |
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| 3UTR CAA 72 bp | GGTATCCATACATACCTAAAGAGTCCTTGGATGAGCTaGGGAAACAATAAATTTCCTGAAATTATAGTATAC | + |
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Preference number: 4 (lower is better) Translates to: GIHTYLKSPWMS*GNNKFPEIIVY Trigger: GTATACTATAATTTCAGGAAATTTATTGTTTCCCAAGCTCATCCAAGGACTCTTTAGGTATGTATGGATACC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445930.7 |
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| CDS-3UTR CAA 90 bp | GCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCAGAAGCGAGATCTCTAAGGCTCGGTaGCCGGGCTCGGCGAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: ARLPGSAKGFCFVRGRSEISKAR*PGSAKG Trigger: GCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGAT...CTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | CTGGCCCTAGGCCTGGTCATCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCCGAAAGGCTTCTGCTTaGTCAGAGGCAGAAGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: LALGLVISKARLPGSAKGRKASA*SEAEAS Trigger: ACTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCG...GCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGATGACCAGGCCTAGGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | TCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCAATCTCTAAGGCTCGGTaGCCGGGCTCGGCGAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SLRLGCRARRKASALSEAISKAR*PGSAKG Trigger: GCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGAT...TGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | GCTCCACAAGCTCAGGGCCGGATGACAAAGCGCCTTGTCCCTGGCCCTAGGCCTCGGCCGTCGATCTCCTaGTGTTCAAGCAACTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: APQAQGRMTKRLVPGPRPRPSIS*CSSNFL Trigger: CAAGAAGTTGCTTGAACACAAGGAGATCGACGGCCG...AGGCCTAGGGCCAGGGACAAGGCGCTTTGTCATCCGGCCCTGAGCTTGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553798.5 ENST00000553899.5 |
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| CDS-3UTR CAA 90 bp | GCTCCACAAGCTCAGGGCCGGATGACAAAGCGCCTTGTCCCTGGCCCTAGGCCTCGAAAGGCTTCTGCTTaGTCAGAGGCAGAAGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: APQAQGRMTKRLVPGPRPRKASA*SEAEAS Trigger: ACTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCG...AGGCCTAGGGCCAGGGACAAGGCGCTTTGTCATCCGGCCCTGAGCTTGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | CTAGGCCTGGTCATCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCCGGCCGTCGATCTCCTaGTGTTCAAGCAACTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LGLVISKARLPGSAKGFCRPSIS*CSSNFL Trigger: CAAGAAGTTGCTTGAACACAAGGAGATCGACGGCCG...GCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGATGACCAGGCCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553798.5 ENST00000553899.5 |
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| CDS-3UTR CAA 90 bp | TCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTGCTTTGTCAGAGGCACGAAAGGCTTCTGCTTaGTCAGAGGCAGAAGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: SLRLGCRARRKASALSEARKASA*SEAEAS Trigger: ACTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCG...TGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS GCA 90 bp | CTGGTCATCTCTAAGGCTCGGTTGCCGGGCTCGGCGAAAGGCTTCTaGTTTGTCAGAGGCAGAAGCGAGTCGAGGCACTTGATTAAATGG | + |
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Preference number: 5 (lower is better) Translates to: LVISKARLPGSAKGF*FVRGRSESRHLIKW Trigger: CCATTTAATCAAGTGCCTCGACTCGCTTCTGCCTCTGACAAAGCAGAAGCCTTTCGCCGAGCCCGGCAACCGAGCCTTAGAGATGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | CCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTACACCCGAAGGAGAGCGAGTCGAGGCACTaGATTAAATGGAAAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: PPMFCHPGWTGPFLHPKESESRH*IKWKER Trigger: CCTTTCTTTCCATTTAATCAAGTGCCTCGACTCGCT...CTCCTTCGGGTGTAGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | CCCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGGCCATTTCTAGCGAGTCGAGGCACTaGATTAAATGGAAAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: PLLKAADVLSPGLDWAISSESRH*IKWKER Trigger: CCTTTCTTTCCATTTAATCAAGTGCCTCGACTCGCT...AGAAATGGCCCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | TTAATTGTTCCCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGGCCACAGAGCCCCACGTaGACAGAGGGTTTAGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LIVPLLKAADVLSPGLDWPQSPT*TEGLVV Trigger: TACAACTAAACCCTCTGTCAACGTGGGGCTCTGTGG...CCAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGGGAACAATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | TTTAATTGTTCCCTTACTCAAGGCCGCCGATGTTCTGTCACCCGGGCTGGACTGAGCGAGTCGAGGCACTaGATTAAATGGAAAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: FNCSLTQGRRCSVTRAGLSESRH*IKWKER Trigger: CCTTTCTTTCCATTTAATCAAGTGCCTCGACTCGCT...CAGTCCAGCCCGGGTGACAGAACATCGGCGGCCTTGAGTAAGGGAACAATTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553798.5 ENST00000553899.5 ENST00000557517.1 |
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| CDS-3UTR CAA 90 bp | GGGTCCAGACCTCCACATCCTCAACAGGGACCTATCGTCTTACATAAACCAAGAAGTCCTTGGATGAGCTaGGGAAACAATAAATTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GSRPPHPQQGPIVLHKPRSPWMS*GNNKFP Trigger: AGGAAATTTATTGTTTCCCAAGCTCATCCAAGGACT...TCTTGGTTTATGTAAGACGATAGGTCCCTGTTGAGGATGTGGAGGTCTGGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445930.7 |
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| CDS-3UTR CAA 90 bp | TCCACAATCCATCTGGGTTATCAAATAGTTTACTTGCTAAAGAACCTAAAGGACCGGCCGTCGATCTCCTaGTGTTCAAGCAACTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: STIHLGYQIVYLLKNLKDRPSIS*CSSNFL Trigger: CAAGAAGTTGCTTGAACACAAGGAGATCGACGGCCG...GTCCTTTAGGTTCTTTAGCAAGTAAACTATTTGATAACCCAGATGGATTGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445930.7 |
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| CDS-3UTR CAA 90 bp | GGTTTAGTTGTATTTCTGTCCTCCAAGGAGACATTAGTTGAAGGAAAACTTAAGCGGCCGTCGATCTCCTaGTGTTCAAGCAACTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GLVVFLSSKETLVEGKLKRPSIS*CSSNFL Trigger: CAAGAAGTTGCTTGAACACAAGGAGATCGACGGCCG...CTTAAGTTTTCCTTCAACTAATGTCTCCTTGGAGGACAGAAATACAACTAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554044.5 |
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| CDS-3UTR CAA 90 bp | GCTTACTTTTGTCAAGCCACGTTGACAGAGGGTTTAGTTGTATTTCTGTCCTCCTTTTGTCAAGCCACGTaGACAGAGGGTTTAGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: AYFCQATLTEGLVVFLSSFCQAT*TEGLVV Trigger: TACAACTAAACCCTCTGTCAACGTGGCTTGACAAAA...GGAGGACAGAAATACAACTAAACCCTCTGTCAACGTGGCTTGACAAAAGTAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554044.5 |
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| CDS-3UTR CAA 90 bp | CATGTTTTGAACATTTCTGACACTCCTACATCCCCTACATCATACACTCTTAGCATACCTAAAGAGTCCTaGGATGAGCTTGGGAAACAA | + |
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Preference number: 5 (lower is better) Translates to: HVLNISDTPTSPTSYTLSIPKES*DELGKQ Trigger: TTGTTTCCCAAGCTCATCCAAGGACTCTTTAGGTAT...GCTAAGAGTGTATGATGTAGGGGATGTAGGAGTGTCAGAAATGTTCAAAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445930.7 |
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| CDS GCA 90 bp | CTAGCTATGTCTGAACAAATCATCCTTGTGAGTTATGGGCATAAATaGTCCACCTGCTTGCCTCAAGAATTAGAGACAATAACTTACATG | + |
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Preference number: 5 (lower is better) Translates to: LAMSEQIILVSYGHK*STCLPQELETITYM Trigger: CATGTAAGTTATTGTCTCTAATTCTTGAGGCAAGCAGGTGGAGCATTTATGCCCATAACTCACAAGGATGATTTGTTCAGACATAGCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555887.5 |
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| CDS-3UTR CAA 90 bp | TTAGTTGTATTTCTGTCCTCCAAGGAGACATTAGTTGAAGGAAAACTTAAGTCTGGCTTCAGCTTACTTTaGTCAAGCCACGTTGACAGA | + |
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Preference number: 5 (lower is better) Translates to: LVVFLSSKETLVEGKLKSGFSLL*SSHVDR Trigger: TCTGTCAACGTGGCTTGACAAAAGTAAGCTGAAGCC...AGACTTAAGTTTTCCTTCAACTAATGTCTCCTTGGAGGACAGAAATACAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554044.5 |
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| CDS GCA 90 bp | TCTGAACAAATCATCCTTGTGAGTTATGGGCATAAATGCTCCACCTaGTTGCCTCAAGAATTAGAGACAATAACTTACATGAAACTGCTT | + |
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Preference number: 5 (lower is better) Translates to: SEQIILVSYGHKCST*LPQELETITYMKLL Trigger: AAGCAGTTTCATGTAAGTTATTGTCTCTAATTCTTGAGGCAAGCAGGTGGAGCATTTATGCCCATAACTCACAAGGATGATTTGTTCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555887.5 |
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| CDS TCA 72 bp | GTGCCTGTAGTCCCAGCTAATCAGGAGGCTGAGGTGTaGGGATCATTTGAACTTGGGAGGCAGAAGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: VPVVPANQEAEV*GSFELGRQKLQ Trigger: CTGCAACTTCTGCCTCCCAAGTTCAAATGATCCTCACACCTCAGCCTCCTGATTAGCTGGGACTACAGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557557.1 |
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| CDS CAA 72 bp | CTTTGTGTGTTTCCAAAAACACAGGGCAGGCAGAATTaGGTTCACAAGCCATGTTTTACTGGCCTGCACCCT | + |
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Preference number: 6 (lower is better) Translates to: LCVFPKTQGRQN*VHKPCFTGLHP Trigger: AGGGTGCAGGCCAGTAAAACATGGCTTGTGAACCAAATTCTGCCTGCCCTGTGTTTTTGGAAACACACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557557.1 |
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| CDS CCA 72 bp | AATCCTCCCTGTCATTTAAAAACATATCCTCATGCCTaGTCCTGGCACTTCCCTAATTTCCTATCCCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: NPPCHLKTYPHA*SWHFPNFLSPF Trigger: AAAGGGGGATAGGAAATTAGGGAAGTGCCAGGACCAGGCATGAGGATATGTTTTTAAATGACAGGGAGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000557557.1 |
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| CDS CAA 90 bp | CTGGCATCTAGCAAGAGCTCAGTATTTGTGGAAGAAACCTATACATaGACATCCTTTGTTCAGTTCGGTCTTTCCAGCTCAAAACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LASSKSSVFVEETYT*TSFVQFGLSSSKLS Trigger: AGAGAGTTTTGAGCTGGAAAGACCGAACTGAACAAAGGATGTCAATGTATAGGTTTCTTCCACAAATACTGAGCTCTTGCTAGATGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557557.1 |
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| CDS GCA 72 bp | TCTGAACAAATCATCCTTGTGAGTTATGGGCATAAATaGTCCACCTGCTTGCCTCAAGAATTAGAGACAATA | + |
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Preference number: 6 (lower is better) Translates to: SEQIILVSYGHK*STCLPQELETI Trigger: TATTGTCTCTAATTCTTGAGGCAAGCAGGTGGAGCATTTATGCCCATAACTCACAAGGATGATTTGTTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555887.5 |
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| CDS CAA 72 bp | ATCCTTGTGAGTTATGGGCATAAATGCTCCACCTGCTaGCCTCAAGAATTAGAGACAATAACTTACATGAAA | + |
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Preference number: 6 (lower is better) Translates to: ILVSYGHKCSTC*PQELETITYMK Trigger: TTTCATGTAAGTTATTGTCTCTAATTCTTGAGGCAAGCAGGTGGAGCATTTATGCCCATAACTCACAAGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555887.5 |
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| CDS CAA 90 bp | CTGCTTGCCTCAAGAATTAGAGACAATAACTTACATGAAACTGCTTaGTCAATCATCAGGCACTATACAAATATAAAGTATTACCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: LLASRIRDNNLHETA*SIIRHYTNIKYYLS Trigger: CGACAGGTAATACTTTATATTTGTATAGTGCCTGATGATTGACAAAGCAGTTTCATGTAAGTTATTGTCTCTAATTCTTGAGGCAAGCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555887.5 |
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