Pregenerated sensors for PSMC5 (Homo sapiens)
Ensembl gene IDs: ENSG00000087191Ensembl transcript IDs: ENST00000375812.8, ENST00000578570.5, ENST00000579147.5, ENST00000579708.5, ENST00000580265.1, ENST00000580864.5, ENST00000581764.1, ENST00000582420.1, ENST00000583283.1, ENST00000584657.1, ENST00000585242.5
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCATTGGCGGAGTCCGCTaGCTGCCTTCCCCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTIGGVR*LPSPPP Trigger: TGGAGGAGGGGAAGGCAGGCAGCGGACTCCGCCAAT...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR GCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCTCCAGCATCGTGCGCTaGACTTCACTGTCCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTSSIVR*TSLSPP Trigger: TGGAGGGGACAGTGAAGTGCAGCGCACGATGCTGGA...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR GCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCGCAACTCCAGCATCGTaGGCTGCACTTCACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTATPAS*AALHCP Trigger: GGGACAGTGAAGTGCAGCGCACGATGCTGGAGTTGC...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR TCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCCATGTTCCCGTGCCATaGCAAACAGCTCCCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTHVPVP*QTAPSP Trigger: TGGTGAGGGAGCTGTTTGTCATGGCACGGGAACATG...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR GCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCTGGAGCATGTTCCCGTaGCATGACAAACAGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTWSMFP*HDKQLP Trigger: AGGGAGCTGTTTGTCATGGCACGGGAACATGCTCCA...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR CCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCTCAAAGCCGTCGAGCTaGTTGAGCAACTCCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTSKPSS*LSNSSI Trigger: GATGCTGGAGTTGCTCAACCAGCTCGACGGCTTTGA...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR GCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCCTCCCTCACCATTCTTaGCCCTTCCCCTATGAATTT | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTLPHHS*PFPYEF Trigger: AAATTCATAGGGGAAGGGGCAAGAATGGTGAGGGAG...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR TCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCCTTCAGGATGTACCTTaGCCAACACTTTCTTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTLQDVP*PTLSSY Trigger: ATAAGAAGAAAGTGTTGGTCAAGGTACATCCTGAAG...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR TCA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCTGGGTGTCACATCATTaGTGTCAATGTTTTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTWVSHH*CQCFCP Trigger: TGGACAAAAACATTGACATCAATGATGTGACACCCA...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS CCA 90 bp | GCGCTGACACAGCAGATCCGGTCGCAGGCAGCGTCCAGCATGGACTaGTCCAGGCACCTCCGACCCACCCGACGCTCCTGCCCCGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: ALTQQIRSQAASSMD*SRHLRPTRRSCPGP Trigger: CGGGCCGGGGCAGGAGCGTCGGGTGGGTCGGAGGTGCCTGGACCAGTCCATGCTGGACGCTGCCTGCGACCGGATCTGCTGTGTCAGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578570.5 ENST00000583283.1 |
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| CDS GCA 90 bp | GAAGGAGCCAGCGGAACGGAGCCAAAGGACTGGCGTCCCGTCTCCTaGGACCCGTGGGCCGGCCATTCCCGCGCCCATCGCTTCCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: EGASGTEPKDWRPVS*DPWAGHSRAHRFPH Trigger: GTGAGGGAAGCGATGGGCGCGGGAATGGCCGGCCCACGGGTCGCAGGAGACGGGACGCCAGTCCTTTGGCTCCGTTCCGCTGGCTCCTTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375812.8 ENST00000578570.5 ENST00000580265.1 ENST00000580864.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS GCA 90 bp | TCCAGCATGGACTGGTCCAGGCACCTCCGACCCACCCGACGCTCCTaGCCCGGCCCGCTCTCCACTCAGATCACGCTCGCTCCGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: SSMDWSRHLRPTRRS*PGPLSTQITLAPHP Trigger: TGGGTGCGGAGCGAGCGTGATCTGAGTGGAGAGCGGGCCGGGGCAGGAGCGTCGGGTGGGTCGGAGGTGCCTGGACCAGTCCATGCTGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578570.5 ENST00000583283.1 |
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| CDS CCA 90 bp | AGCGGAACGGAGCCAAAGGACTGGCGTCCCGTCTCCTGCGACCCGTaGGCCGGCCATTCCCGCGCCCATCGCTTCCCTCACTCACTCCGC | + |
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Preference number: 5 (lower is better) Translates to: SGTEPKDWRPVSCDP*AGHSRAHRFPHSLR Trigger: GCGGAGTGAGTGAGGGAAGCGATGGGCGCGGGAATGGCCGGCCCACGGGTCGCAGGAGACGGGACGCCAGTCCTTTGGCTCCGTTCCGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375812.8 ENST00000578570.5 ENST00000580265.1 ENST00000580864.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS CCA 90 bp | GGTGTCAGTACTGACGAAGGAGCCAGCGGAACGGAGCCAAAGGACTaGCGTCCCGTCTCCTGCGACCCGTGGGCCGGCCATTCCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: GVSTDEGASGTEPKD*RPVSCDPWAGHSRA Trigger: GGCGCGGGAATGGCCGGCCCACGGGTCGCAGGAGACGGGACGCCAGTCCTTTGGCTCCGTTCCGCTGGCTCCTTCGTCAGTACTGACACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375812.8 ENST00000578570.5 ENST00000580265.1 ENST00000580864.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS TCA 90 bp | GCGTCTTCCTCTCCCAGCCTTGCCCTGACTCACCGAGGGCGGCGCTaGCACAGCAGATCCGGTCGCAGGCAGCGTCCAGCATGGACTGGT | + |
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Preference number: 5 (lower is better) Translates to: ASSSPSLALTHRGRR*HSRSGRRQRPAWTG Trigger: ACCAGTCCATGCTGGACGCTGCCTGCGACCGGATCTGCTGTGTCAGCGCCGCCCTCGGTGAGTCAGGGCAAGGCTGGGAGAGGAAGACGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578570.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS GCA 90 bp | TTCCCTCACTCACTCCGCTTCTACCGCGTCTTCCTCTCCCAGCCTTaGCCTGACTCACCGAGGGCGGCGCTGCTCTGGTCCGTCAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: FPHSLRFYRVFLSQP*PDSPRAALLWSVKR Trigger: GCGCTTGACGGACCAGAGCAGCGCCGCCCTCGGTGAGTCAGGGCAAGGCTGGGAGAGGAAGACGCGGTAGAAGCGGAGTGAGTGAGGGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580864.5 |
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| CDS GCA 90 bp | GGGGTTAGGGTGAAATTGAAAATCCATGGACCCACCCGACGCTCCTaGCCCGGCCCGCTCTCCACTCAGATCACGCTCGCTCCGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: GVRVKLKIHGPTRRS*PGPLSTQITLAPHP Trigger: TGGGTGCGGAGCGAGCGTGATCTGAGTGGAGAGCGGGCCGGGGCAGGAGCGTCGGGTGGGTCCATGGATTTTCAATTTCACCCTAACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS TCA 90 bp | GCTTTGCACTGCGTGAAGTGCTCTACAAGCCCGAGGTGTCAGTACTaGCGAAGGAGCCAGCGGAACGGAGCCAAAGGACTGGCGTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: ALHCVKCSTSPRCQY*RRSQRNGAKGLASR Trigger: ACGGGACGCCAGTCCTTTGGCTCCGTTCCGCTGGCTCCTTCGTCAGTACTGACACCTCGGGCTTGTAGAGCACTTCACGCAGTGCAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375812.8 ENST00000578570.5 ENST00000580265.1 ENST00000580864.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS GCA 90 bp | TGCACACGCCCTGAACAGGAAAAGGAAATTGAGGCCCCACTGCTGTaGCCCTCATCTGTGGCCCTTGAGCCCAGAGCTTCCTGCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CTRPEQEKEIEAPLL*PSSVALEPRASCLC Trigger: GCAGAGGCAGGAAGCTCTGGGCTCAAGGGCCACAGATGAGGGGCACAGCAGTGGGGCCTCAATTTCCTTTTCCTGTTCAGGGCGTGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584657.1 |
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| CDS GCA 90 bp | CCACTGCTGTGCCCCTCATCTGTGGCCCTTGAGCCCAGAGCTTCCTaGCTCTGCCCTGTTTTCAGTGGGTACTCCAATTACCTTCACTTC | + |
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Preference number: 5 (lower is better) Translates to: PLLCPSSVALEPRAS*LCPVFSGYSNYLHF Trigger: GAAGTGAAGGTAATTGGAGTACCCACTGAAAACAGGGCAGAGGCAGGAAGCTCTGGGCTCAAGGGCCACAGATGAGGGGCACAGCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584657.1 |
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| CDS CCA 90 bp | GTAGCTCCTCCCGCAATAGGCGAACTAGATGGCAAACAGACACAGTaGTCACCTAGCTACTCCTTTGGAGTCTCCAGGACCCAATTCTAC | + |
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Preference number: 5 (lower is better) Translates to: VAPPAIGELDGKQTQ*SPSYSFGVSRTQFY Trigger: GTAGAATTGGGTCCTGGAGACTCCAAAGGAGTAGCTAGGTGACCACTGTGTCTGTTTGCCATCTAGTTCGCCTATTGCGGGAGGAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS TCA 90 bp | TTCCTTGACAGCCACCAAATCACTAATCCTACCCAGGAAGACCTATaGGAATCCCACAATACCTTGACAGAACACAGAACCCTGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: FLDSHQITNPTQEDL*ESHNTLTEHRTLSP Trigger: GGGAGACAGGGTTCTGTGTTCTGTCAAGGTATTGTGGGATTCTCATAGGTCTTCCTGGGTAGGATTAGTGATTTGGTGGCTGTCAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS GCA 90 bp | CCTTCAAGAGTCCCTCTGGACCTTACAGCAGCCATCAAAGAAGGCTaGTTGTCCAATACTGGTCCAGGAGTAACAGAATCTAATGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: PSRVPLDLTAAIKEG*LSNTGPGVTESNGE Trigger: TTCTCCATTAGATTCTGTTACTCCTGGACCAGTATTGGACAAGCAGCCTTCTTTGATGGCTGCTGTAAGGTCCAGAGGGACTCTTGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579147.5 ENST00000581764.1 |
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| CDS TCA 90 bp | CTGACCCCACCACCACCACCACCTCACCTGCTACACTCACATCATTaGTGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LTPPPPPPHLLHSHH*CQCFCPRLQQIYLQ Trigger: CTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAATGATGTGAGTGTAGCAGGTGAGGTGGTGGTGGTGGTGGGGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS-3UTR CAA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCAGAGCCACCCGGCAATaGGGTGTCACATCATTGATG | + |
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Preference number: 5 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTRATRQ*GVTSLM Trigger: CATCAATGATGTGACACCCAATTGCCGGGTGGCTCT...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS-3UTR CAA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCGTAGCCATGATAACCTaGATGTTCTTGGTGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTVAMIT*MFLVAS Trigger: TGAGGCCACCAAGAACATCAAGGTTATCATGGCTAC...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS CCA 90 bp | ATAAGAATCCTTTTCATTCGGGCTTCTTCCAAAAGGGTTGACCTTTaGCTAGAGGTACCTTTACTATTAAGATTTGACTCGAAGATGTGT | + |
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Preference number: 5 (lower is better) Translates to: IRILFIRASSKRVDL*LEVPLLLRFDSKMC Trigger: ACACATCTTCGAGTCAAATCTTAATAGTAAAGGTACCTCTAGCCAAAGGTCAACCCTTTTGGAAGAAGCCCGAATGAAAAGGATTCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000579147.5 ENST00000580265.1 |
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| CDS-3UTR CAA 90 bp | TTGATGTCAATGTTTTTGTCCACGTCTACAACAAATTTACCTTCAGGATGTACCCCTTCAGGATGTACCTaGACCAACACTTTCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: LMSMFLSTSTTNLPSGCTPSGCT*TNTFFL Trigger: TAAGAAGAAAGTGTTGGTCAAGGTACATCCTGAAGG...GGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585242.5 |
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| CDS GCA 72 bp | AGCGGAACGGAGCCAAAGGACTGGCGTCCCGTCTCCTaGGACCCGTGGGCCGGCCATTCCCGCGCCCATCGC | + |
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Preference number: 6 (lower is better) Translates to: SGTEPKDWRPVS*DPWAGHSRAHR Trigger: GCGATGGGCGCGGGAATGGCCGGCCCACGGGTCGCAGGAGACGGGACGCCAGTCCTTTGGCTCCGTTCCGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375812.8 ENST00000578570.5 ENST00000580265.1 ENST00000580864.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS GCA 72 bp | CTCCGCACCCAGCCCCGTAACCTGCCGGGCCGCCACTaGACCCGCCATACCTGCTCTGGTCCGTCAAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LRTQPRNLPGRH*TRHTCSGPSSA Trigger: GGCGCTTGACGGACCAGAGCAGGTATGGCGGGTGCAGTGGCGGCCCGGCAGGTTACGGGGCTGGGTGCGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578570.5 ENST00000581764.1 ENST00000583283.1 |
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| CDS GCA 72 bp | GACTGGTCCAGGCACCTCCGACCCACCCGACGCTCCTaGCCCGGCCCGCTCTCCACTCAGATCACGCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: DWSRHLRPTRRS*PGPLSTQITLA Trigger: AGCGAGCGTGATCTGAGTGGAGAGCGGGCCGGGGCAGGAGCGTCGGGTGGGTCGGAGGTGCCTGGACCAGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578570.5 ENST00000583283.1 |
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| CDS GCA 72 bp | TCAGATCACGCTCGCTCCGCACCCAGCCCCGTAACCTaGCGGGCCGCCACTGCACCCGCCATACCTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SDHARSAPSPVT*RAATAPAIPAL Trigger: CAGAGCAGGTATGGCGGGTGCAGTGGCGGCCCGGCAGGTTACGGGGCTGGGTGCGGAGCGAGCGTGATCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578570.5 ENST00000581764.1 ENST00000583283.1 |
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| CDS CCA 72 bp | CAGCAGATCCGGTCGCAGGCAGCGTCCAGCATGGACTaGTCCAGGCACCTCCGACCCACCCGACGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QQIRSQAASSMD*SRHLRPTRRSC Trigger: GCAGGAGCGTCGGGTGGGTCGGAGGTGCCTGGACCAGTCCATGCTGGACGCTGCCTGCGACCGGATCTGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578570.5 ENST00000583283.1 |
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| CDS TCA 72 bp | TCTCCCAGCCTTGCCCTGACTCACCGAGGGCGGCGCTaGCACAGCAGATCCGGTCGCAGGCAGCGTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPSLALTHRGRR*HSRSGRRQRPA Trigger: TGCTGGACGCTGCCTGCGACCGGATCTGCTGTGTCAGCGCCGCCCTCGGTGAGTCAGGGCAAGGCTGGGAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578570.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS CCA 72 bp | ACTGACGAAGGAGCCAGCGGAACGGAGCCAAAGGACTaGCGTCCCGTCTCCTGCGACCCGTGGGCCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: TDEGASGTEPKD*RPVSCDPWAGH Trigger: ATGGCCGGCCCACGGGTCGCAGGAGACGGGACGCCAGTCCTTTGGCTCCGTTCCGCTGGCTCCTTCGTCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375812.8 ENST00000578570.5 ENST00000580265.1 ENST00000580864.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS GCA 72 bp | TCACTCCGCTTCTACCGCGTCTTCCTCTCCCAGCCTTaGCCTGACTCACCGAGGGCGGCGCTGCTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SLRFYRVFLSQP*PDSPRAALLWS Trigger: GGACCAGAGCAGCGCCGCCCTCGGTGAGTCAGGGCAAGGCTGGGAGAGGAAGACGCGGTAGAAGCGGAGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580864.5 |
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| CDS CAA 72 bp | CTCTCTTCAGCAGAGACCGCCGGCATCCGAGCCGTCTaGGCGCGCAAGCGCGGAAGCGGAGGATTGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: LSSAETAGIRAV*ARKRGSGGLGQ Trigger: TTGTCCCAATCCTCCGCTTCCGCGCTTGCGCGCCAAGACGGCTCGGATGCCGGCGGTCTCTGCTGAAGAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579708.5 |
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| CDS CCA 72 bp | TCTCTTCAGCAGAGACCGCCGGCATCCGAGCCGTCTTaGCGCGCAAGCGCGGAAGCGGAGGATTGGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: SLQQRPPASEPS*RASAEAEDWDK Trigger: TTTGTCCCAATCCTCCGCTTCCGCGCTTGCGCGCCAAGACGGCTCGGATGCCGGCGGTCTCTGCTGAAGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579708.5 |
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| CDS GCA 72 bp | CCCTGTCTCCCGAGGCTACACACAAAGGGGTGGGAATaGAGTGGAGACCGAGCTGGTCCCTGGGGTCATGCT | + |
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Preference number: 6 (lower is better) Translates to: PCLPRLHTKGWE*SGDRAGPWGHA Trigger: AGCATGACCCCAGGGACCAGCTCGGTCTCCACTGCATTCCCACCCCTTTGTGTGTAGCCTCGGGAGACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS GCA 72 bp | GTGAAATTGAAAATCCATGGACCCACCCGACGCTCCTaGCCCGGCCCGCTCTCCACTCAGATCACGCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: VKLKIHGPTRRS*PGPLSTQITLA Trigger: AGCGAGCGTGATCTGAGTGGAGAGCGGGCCGGGGCAGGAGCGTCGGGTGGGTCCATGGATTTTCAATTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS CCA 72 bp | ACAGAACCCTGTCTCCCGAGGCTACACACAAAGGGGTaGGAATGCAGTGGAGACCGAGCTGGTCCCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: TEPCLPRLHTKG*ECSGDRAGPWG Trigger: ACCCCAGGGACCAGCTCGGTCTCCACTGCATTCCCACCCCTTTGTGTGTAGCCTCGGGAGACAGGGTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS TCA 72 bp | TGCGTGAAGTGCTCTACAAGCCCGAGGTGTCAGTACTaGCGAAGGAGCCAGCGGAACGGAGCCAAAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: CVKCSTSPRCQY*RRSQRNGAKGL Trigger: CAGTCCTTTGGCTCCGTTCCGCTGGCTCCTTCGTCAGTACTGACACCTCGGGCTTGTAGAGCACTTCACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000375812.8 ENST00000578570.5 ENST00000580265.1 ENST00000580864.5 ENST00000582420.1 ENST00000583283.1 |
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| CDS GCA 72 bp | TGCCCCTCATCTGTGGCCCTTGAGCCCAGAGCTTCCTaGCTCTGCCCTGTTTTCAGTGGGTACTCCAATTAC | + |
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Preference number: 6 (lower is better) Translates to: CPSSVALEPRAS*LCPVFSGYSNY Trigger: GTAATTGGAGTACCCACTGAAAACAGGGCAGAGGCAGGAAGCTCTGGGCTCAAGGGCCACAGATGAGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584657.1 |
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| CDS CCA 72 bp | AAGGGGTGGGAATGCAGTGGAGACCGAGCTGGTCCCTaGGGTCATGCTGCTTTTACCTTGACCAACACTTTC | + |
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Preference number: 6 (lower is better) Translates to: KGWECSGDRAGP*GHAAFTLTNTF Trigger: GAAAGTGTTGGTCAAGGTAAAAGCAGCATGACCCCAGGGACCAGCTCGGTCTCCACTGCATTCCCACCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS GCA 72 bp | ACAGTGCAGGGAGATAAGGACAGACCTCAGACAAACTaGCCACATGCGGCTTCCCATCTTTCTCCACTCACC | + |
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Preference number: 6 (lower is better) Translates to: TVQGDKDRPQTN*PHAASHLSPLT Trigger: GGTGAGTGGAGAAAGATGGGAAGCCGCATGTGGGCAGTTTGTCTGAGGTCTGTCCTTATCTCCCTGCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS CCA 72 bp | CCCGCAATAGGCGAACTAGATGGCAAACAGACACAGTaGTCACCTAGCTACTCCTTTGGAGTCTCCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: PAIGELDGKQTQ*SPSYSFGVSRT Trigger: GGTCCTGGAGACTCCAAAGGAGTAGCTAGGTGACCACTGTGTCTGTTTGCCATCTAGTTCGCCTATTGCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS CCA 72 bp | TCATTCCTTAGAGCCACCCGGCAATTGGGTGTCACCTaGGTGAAGGGGGCGAGTTTCAGAAGTGGTACAGTA | + |
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Preference number: 6 (lower is better) Translates to: SFLRATRQLGVT*VKGASFRSGTV Trigger: TACTGTACCACTTCTGAAACTCGCCCCCTTCACCCAGGTGACACCCAATTGCCGGGTGGCTCTAAGGAATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS GCA 72 bp | GGAATGCAGTGGAGACCGAGCTGGTCCCTGGGGTCATaGTGCTTTTACCTTGACCAACACTTTCTTCTTATC | + |
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Preference number: 6 (lower is better) Translates to: GMQWRPSWSLGS*CFYLDQHFLLI Trigger: GATAAGAAGAAAGTGTTGGTCAAGGTAAAAGCAGCATGACCCCAGGGACCAGCTCGGTCTCCACTGCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS CAA 72 bp | ATGGCAAACAGACACAGTGGTCACCTAGCTACTCCTTaGGAGTCTCCAGGACCCAATTCTACGTGCATGAGC | + |
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Preference number: 6 (lower is better) Translates to: MANRHSGHLATP*ESPGPNSTCMS Trigger: GCTCATGCACGTAGAATTGGGTCCTGGAGACTCCAAAGGAGTAGCTAGGTGACCACTGTGTCTGTTTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS GCA 72 bp | GTCCCTCTGGACCTTACAGCAGCCATCAAAGAAGGCTaGTTGTCCAATACTGGTCCAGGAGTAACAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: VPLDLTAAIKEG*LSNTGPGVTES Trigger: AGATTCTGTTACTCCTGGACCAGTATTGGACAAGCAGCCTTCTTTGATGGCTGCTGTAAGGTCCAGAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579147.5 ENST00000581764.1 |
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| CDS CCA 72 bp | AGCAGCTTCTTCCACTGCACTCCCAAAGGAATTAGATaGATTTGTGGAAGTCCGTTTCCATCCCCCATCATC | + |
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Preference number: 6 (lower is better) Translates to: SSFFHCTPKGIR*ICGSPFPSPII Trigger: GATGATGGGGGATGGAAACGGACTTCCACAAATCCATCTAATTCCTTTGGGAGTGCAGTGGAAGAAGCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000579147.5 ENST00000580265.1 |
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| CDS CAA 90 bp | TCAAGAGTCCCTCTGGACCTTACAGCAGCCATCAAAGAAGGCTGCTaGTCCAATACTGGTCCAGGAGTAACAGAATCTAATGGAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: SRVPLDLTAAIKEGC*SNTGPGVTESNGEK Trigger: CTTTTCTCCATTAGATTCTGTTACTCCTGGACCAGTATTGGACAAGCAGCCTTCTTTGATGGCTGCTGTAAGGTCCAGAGGGACTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000579147.5 ENST00000581764.1 |
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| CDS CAA 72 bp | CCTCTGGACCTTACAGCAGCCATCAAAGAAGGCTGCTaGTCCAATACTGGTCCAGGAGTAACAGAATCTAAT | + |
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Preference number: 6 (lower is better) Translates to: PLDLTAAIKEGC*SNTGPGVTESN Trigger: ATTAGATTCTGTTACTCCTGGACCAGTATTGGACAAGCAGCCTTCTTTGATGGCTGCTGTAAGGTCCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579147.5 ENST00000581764.1 |
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| CDS TCA 72 bp | AGCCACCAAATCACTAATCCTACCCAGGAAGACCTATaGGAATCCCACAATACCTTGACAGAACACAGAACC | + |
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Preference number: 6 (lower is better) Translates to: SHQITNPTQEDL*ESHNTLTEHRT Trigger: GGTTCTGTGTTCTGTCAAGGTATTGTGGGATTCTCATAGGTCTTCCTGGGTAGGATTAGTGATTTGGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS TCA 72 bp | CCACCACCACCACCTCACCTGCTACACTCACATCATTaGTGTCAATGTTTTTGTCCACGTCTACAACAAATT | + |
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Preference number: 6 (lower is better) Translates to: PPPPPHLLHSHH*CQCFCPRLQQI Trigger: AATTTGTTGTAGACGTGGACAAAAACATTGACATCAATGATGTGAGTGTAGCAGGTGAGGTGGTGGTGGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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| CDS CCA 72 bp | CTTTTCATTCGGGCTTCTTCCAAAAGGGTTGACCTTTaGCTAGAGGTACCTTTACTATTAAGATTTGACTCG | + |
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Preference number: 6 (lower is better) Translates to: LFIRASSKRVDL*LEVPLLLRFDS Trigger: CGAGTCAAATCTTAATAGTAAAGGTACCTCTAGCCAAAGGTCAACCCTTTTGGAAGAAGCCCGAATGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000579147.5 ENST00000580265.1 |
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| CDS CAA 72 bp | CCCAATTTCTTTCATTCAGTCTCTATGGAATTAGCATaGTCCAGATCCCTCAATGATGCCCTTCCTCACATT | + |
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Preference number: 6 (lower is better) Translates to: PNFFHSVSMELA*SRSLNDALPHI Trigger: AATGTGAGGAAGGGCATCATTGAGGGATCTGGACAATGCTAATTCCATAGAGACTGAATGAAAGAAATTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579147.5 |
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| CDS CAA 90 bp | AACACTAAGACCCTCAAAGAGATGGGACTGGAGGAGAACAAGAGATaGCTTACTTCTGATACATACACCCTACTAGCTAAGAAACAAACA | + |
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Preference number: 6 (lower is better) Translates to: NTKTLKEMGLEENKR*LTSDTYTLLAKKQT Trigger: TGTTTGTTTCTTAGCTAGTAGGGTGTATGTATCAGAAGTAAGCAATCTCTTGTTCTCCTCCAGTCCCATCTCTTTGAGGGTCTTAGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579147.5 ENST00000580265.1 |
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| CDS CAA 72 bp | TCACCTGCTACACTCACATCATTGATGTCAATGTTTTaGTCCACGTCTACAACAAATTTACCTTCAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: SPATLTSLMSMF*STSTTNLPSGC Trigger: ACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAATGATGTGAGTGTAGCAGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581764.1 |
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