Pregenerated sensors for PSMC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000165916Ensembl transcript IDs: ENST00000298852.8, ENST00000526993.1, ENST00000529500.1, ENST00000530651.5, ENST00000530887.5, ENST00000530912.5, ENST00000602866.5, ENST00000619920.4
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCAATTCCATCTTGACCCCCAGCCACCTCCTTCCCTCTTGTCAATaGCGTCTCCCTGCGGGCCCCGGTTCCCGGACCGCCAGCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: PNSILTPSHLLPSCQ*RLPAGPGSRTASSP Trigger: GGGCGAGCTGGCGGTCCGGGAACCGGGGCCCGCAGGGAGACGCCATTGACAAGAGGGAAGGAGGTGGCTGGGGGTCAAGATGGAATTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530651.5 |
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| CDS CCA 90 bp | ATTCCATCTTGCTTGACCCCCAGCCACCTCCTTCCCTCTTGTCAATaGCGTCTCCCTGCGGGCCCCGGTTCCCGGACCGCCAGCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: IPSCLTPSHLLPSCQ*RLPAGPGSRTASSP Trigger: GGGCGAGCTGGCGGTCCGGGAACCGGGGCCCGCAGGGAGACGCCATTGACAAGAGGGAAGGAGGTGGCTGGGGGTCAAGCAAGATGGAAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530887.5 |
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| CDS CCA 90 bp | ATTAGGAAGTACGAGAGGCGACTCGGATCGCCGGGGCCTGTCCTGTaGGGGCTCCATCGCCCGCACAGGAGCTGTGCGCCCACCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: IRKYERRLGSPGPVL*GLHRPHRSCAPTLI Trigger: GATCAAGGTGGGCGCACAGCTCCTGTGCGGGCGATGGAGCCCCCACAGGACAGGCCCCGGCGATCCGAGTCGCCTCTCGTACTTCCTAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529500.1 |
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| CDS TCA 90 bp | CTTCTCTTGACCAGTGGAAAACCTCTCCCCACAAATCCCGACTCTTaGCCCGACCAGCTCCGGCCGTGCTGCGGAGCAGCGAATCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LLLTSGKPLPTNPDS*PDQLRPCCGAANLP Trigger: AGGCAGATTCGCTGCTCCGCAGCACGGCCGGAGCTGGTCGGGTCAAGAGTCGGGATTTGTGGGGAGAGGTTTTCCACTGGTCAAGAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619920.4 |
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| CDS CCA 90 bp | TGCCGAGTCACTGGACTCTCAATATTCGGCAGCAGATTCATTTCCTaGAGGAGCGGGCAGAAGATGGGACCAGGCGGGAGCCGCAACGGG | + |
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Preference number: 5 (lower is better) Translates to: CRVTGLSIFGSRFIS*RSGQKMGPGGSRNG Trigger: CCCGTTGCGGCTCCCGCCTGGTCCCATCTTCTGCCCGCTCCTCCAGGAAATGAATCTGCTGCCGAATATTGAGAGTCCAGTGACTCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298852.8 ENST00000530912.5 ENST00000619920.4 |
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| CDS TCA 90 bp | GAGCCGCAACGGGAGATTAATACCGTCTTTCTTAAAGCCTTCTCTTaGCCAGTGGAAAACCTCTCCCCACAAATCCCGACTCTTGACCCG | + |
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Preference number: 5 (lower is better) Translates to: EPQREINTVFLKAFS*PVENLSPQIPTLDP Trigger: CGGGTCAAGAGTCGGGATTTGTGGGGAGAGGTTTTCCACTGGTCAAGAGAAGGCTTTAAGAAAGACGGTATTAATCTCCCGTTGCGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298852.8 ENST00000530912.5 ENST00000619920.4 |
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| CDS GCA 90 bp | GAGGCAAACATAGGTTTTAGGTTCTGCCTCATAGTAAGAACTGGGTaGTTTATCGCAGTACAAACCTCTCTGGGCCTGTCTCCTCATCTG | + |
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Preference number: 5 (lower is better) Translates to: EANIGFRFCLIVRTG*FIAVQTSLGLSPHL Trigger: CAGATGAGGAGACAGGCCCAGAGAGGTTTGTACTGCGATAAAGCACCCAGTTCTTACTATGAGGCAGAACCTAAAACCTATGTTTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529500.1 |
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| CDS CCA 90 bp | TTTACTAAAAGAAGGATTCTTGAGAGGATTATTCCCAGTTCTCACTaGGAAAGGCAATCTGATAACTTCTCATCTCAGCCCAGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: FTKRRILERIIPSSH*ERQSDNFSSQPRPP Trigger: GGGAGGCCTGGGCTGAGATGAGAAGTTATCAGATTGCCTTTCCCAGTGAGAACTGGGAATAATCCTCTCAAGAATCCTTCTTTTAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529500.1 |
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| CDS CCA 72 bp | TACGAGAGGCGACTCGGATCGCCGGGGCCTGTCCTGTaGGGGCTCCATCGCCCGCACAGGAGCTGTGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: YERRLGSPGPVL*GLHRPHRSCAP Trigger: GGGCGCACAGCTCCTGTGCGGGCGATGGAGCCCCCACAGGACAGGCCCCGGCGATCCGAGTCGCCTCTCGTA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529500.1 |
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| CDS CAA 72 bp | GCCCGGGCCTCCTCATTGGGCATCGGGAACTCTATCTaGCGGTCAAGGCGGCCCGAGCGGAGGAGGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: ARASSLGIGNSI*RSRRPERRRAG Trigger: CCCCGCCCTCCTCCGCTCGGGCCGCCTTGACCGCAAGATAGAGTTCCCGATGCCCAATGAGGAGGCCCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298852.8 ENST00000530912.5 ENST00000602866.5 ENST00000619920.4 |
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| CDS CCA 72 bp | TGCTTGACCCCCAGCCACCTCCTTCCCTCTTGTCAATaGCGTCTCCCTGCGGGCCCCGGTTCCCGGACCGCC | + |
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Preference number: 6 (lower is better) Translates to: CLTPSHLLPSCQ*RLPAGPGSRTA Trigger: GGCGGTCCGGGAACCGGGGCCCGCAGGGAGACGCCATTGACAAGAGGGAAGGAGGTGGCTGGGGGTCAAGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530887.5 |
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| CDS CCA 72 bp | ATCTTGACCCCCAGCCACCTCCTTCCCTCTTGTCAATaGCGTCTCCCTGCGGGCCCCGGTTCCCGGACCGCC | + |
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Preference number: 6 (lower is better) Translates to: ILTPSHLLPSCQ*RLPAGPGSRTA Trigger: GGCGGTCCGGGAACCGGGGCCCGCAGGGAGACGCCATTGACAAGAGGGAAGGAGGTGGCTGGGGGTCAAGAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530651.5 |
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| CDS CCA 72 bp | CTCCCCAATTCCATCTTGCTCCTTCCCTCTTGTCAATaGCGTCTCCCTGCGGGCCCCGGTTCCCGGACCGCC | + |
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Preference number: 6 (lower is better) Translates to: LPNSILLLPSCQ*RLPAGPGSRTA Trigger: GGCGGTCCGGGAACCGGGGCCCGCAGGGAGACGCCATTGACAAGAGGGAAGGAGCAAGATGGAATTGGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526993.1 |
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| CDS CAA 72 bp | TCCATCTTGCTTGACCCCCAGCCACCTCCTTCCCTCTaGTCAATGGCGTCTCCCTGCGGGCCCCGGTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SILLDPQPPPSL*SMASPCGPRFP Trigger: CGGGAACCGGGGCCCGCAGGGAGACGCCATTGACAAGAGGGAAGGAGGTGGCTGGGGGTCAAGCAAGATGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530887.5 |
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| CDS TCA 72 bp | ACCAGTGGAAAACCTCTCCCCACAAATCCCGACTCTTaGCCCGACCAGCTCCGGCCGTGCTGCGGAGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: TSGKPLPTNPDS*PDQLRPCCGAA Trigger: CGCTGCTCCGCAGCACGGCCGGAGCTGGTCGGGTCAAGAGTCGGGATTTGTGGGGAGAGGTTTTCCACTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298852.8 ENST00000530912.5 ENST00000619920.4 |
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| CDS CAA 72 bp | GACCAGTGGAAAACCTCTCCCCACAAATCCCGACTCTaGACCCGACCAGCTCCGGCCGTGCTGCGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DQWKTSPHKSRL*TRPAPAVLRSS Trigger: GCTGCTCCGCAGCACGGCCGGAGCTGGTCGGGTCAAGAGTCGGGATTTGTGGGGAGAGGTTTTCCACTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298852.8 ENST00000530912.5 ENST00000619920.4 |
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| CDS CAA 90 bp | CCTTCTCTTGACCAGTGGAAAACCTCTCCCCACAAATCCCGACTCTaGACCCGACCAGCTCCGGCCGTGCTGCGGAGCAGCGAATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PSLDQWKTSPHKSRL*TRPAPAVLRSSESA Trigger: GGCAGATTCGCTGCTCCGCAGCACGGCCGGAGCTGGTCGGGTCAAGAGTCGGGATTTGTGGGGAGAGGTTTTCCACTGGTCAAGAGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000530912.5 ENST00000619920.4 |
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| CDS CCA 72 bp | ACTGGACTCTCAATATTCGGCAGCAGATTCATTTCCTaGAGGAGCGGGCAGAAGATGGGACCAGGCGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TGLSIFGSRFIS*RSGQKMGPGGS Trigger: GCTCCCGCCTGGTCCCATCTTCTGCCCGCTCCTCCAGGAAATGAATCTGCTGCCGAATATTGAGAGTCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298852.8 ENST00000530912.5 ENST00000619920.4 |
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| CDS CCA 72 bp | ATCCCACACGGTCGCCATCTTCTCCTGCCGAGTCACTaGACTCTCAATATTCGGCAGCAGATTCATTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: IPHGRHLLLPSH*TLNIRQQIHFL Trigger: CAGGAAATGAATCTGCTGCCGAATATTGAGAGTCCAGTGACTCGGCAGGAGAAGATGGCGACCGTGTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298852.8 ENST00000530912.5 ENST00000619920.4 |
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| CDS TCA 72 bp | CGGGAGATTAATACCGTCTTTCTTAAAGCCTTCTCTTaGCCAGTGGAAAACCTCTCCCCACAAATCCCGACT | + |
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Preference number: 6 (lower is better) Translates to: REINTVFLKAFS*PVENLSPQIPT Trigger: AGTCGGGATTTGTGGGGAGAGGTTTTCCACTGGTCAAGAGAAGGCTTTAAGAAAGACGGTATTAATCTCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298852.8 ENST00000530912.5 ENST00000619920.4 |
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| CDS GCA 72 bp | ATAGGTTTTAGGTTCTGCCTCATAGTAAGAACTGGGTaGTTTATCGCAGTACAAACCTCTCTGGGCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: IGFRFCLIVRTG*FIAVQTSLGLS Trigger: AGACAGGCCCAGAGAGGTTTGTACTGCGATAAAGCACCCAGTTCTTACTATGAGGCAGAACCTAAAACCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529500.1 |
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| CDS CCA 72 bp | AGAAGGATTCTTGAGAGGATTATTCCCAGTTCTCACTaGGAAAGGCAATCTGATAACTTCTCATCTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRILERIIPSSH*ERQSDNFSSQP Trigger: GGGCTGAGATGAGAAGTTATCAGATTGCCTTTCCCAGTGAGAACTGGGAATAATCCTCTCAAGAATCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529500.1 |
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