Pregenerated sensors for PSMB9 (Homo sapiens)
Ensembl gene IDs: ENSG00000240065, ENSG00000240118, ENSG00000242711, ENSG00000243594Ensembl transcript IDs: ENST00000374859.3, ENST00000383114.8, ENST00000383234.8, ENST00000395330.5, ENST00000399371.5, ENST00000399381.3, ENST00000399607.5, ENST00000399619.3, ENST00000413480.5, ENST00000414474.5, ENST00000415658.5, ENST00000417566.5, ENST00000418861.2, ENST00000419512.5, ENST00000420182.5, ENST00000422729.6, ENST00000422904.5, ENST00000423563.2, ENST00000425855.2, ENST00000427870.6, ENST00000434083.5, ENST00000434471.6, ENST00000434587.5, ENST00000438515.5, ENST00000439630.5, ENST00000444284.6, ENST00000445315.2, ENST00000448066.2, ENST00000451862.5, ENST00000453059.6, ENST00000455846.5, ENST00000461032.1, ENST00000464863.1, ENST00000465469.1, ENST00000467593.1, ENST00000468188.1, ENST00000471670.1, ENST00000473852.1, ENST00000478114.1, ENST00000484631.1, ENST00000487731.1, ENST00000488916.1, ENST00000490255.1, ENST00000490282.1, ENST00000493704.1, ENST00000495780.1, ENST00000496665.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGCGGCCTCATCATCATGGACCGCATGATGATGCGGAATGAGAATTTTTATTGTAGAAAGAGTGTATGCTaGCATCTAGGAGGGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: CGLIIMDRMMMRNENFYCRKSVC*HLGGKH Trigger: GTGCTTCCCTCCTAGATGTCAGCATACACTCTTTCT...ACAATAAAAATTCTCATTCCGCATCATCATGCGGTCCATGATGATGAGGCCGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR TCA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCGATGACACCCCCGCTTaGGCCATCCCGGCTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: KHPPPLSSISLSTHFPMTDDTPA*AIPAHG Trigger: GCCATGAGCCGGGATGGCTCAAGCGGGGGTGTCATC...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR CCA 90 bp | CACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCATAATGGTGGTCCCGGTGTaGACTTCTCCCGCCCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HPPPLSSISLSTHFPMTIMVVPV*TSPARG Trigger: ACCCCGGGCGGGAGAAGTCCACACCGGGACCACCAT...TATGGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR GCA 90 bp | GGGAAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGAGAGTGCACAGTAGATaGGCTCGTGCAGCGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: GKHPPPLSSISLSTHFPMRVHSR*ARAAGT Trigger: TGTCCCCGCTGCACGAGCGCATCTACTGTGCACTCT...CATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR TCA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCCAAACTCCACTGCCATaGTGGTGGTCCCGGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KHPPPLSSISLSTHFPMTQTPLP*WWSRCG Trigger: TCCACACCGGGACCACCATCATGGCAGTGGAGTTTG...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR TCA 90 bp | GGGAAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGGTTCATTGCCCAAGATaGCTCGATGGTCCACACCGG | + |
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Preference number: 4 (lower is better) Translates to: GKHPPPLSSISLSTHFPMVHCPR*LDGPHR Trigger: CCGGTGTGGACCATCGAGTCATCTTGGGCAATGAAC...CATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR GCA 90 bp | GAAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCCCGTCAAACTCCACTaGCATGATGGTGGTCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: EAPTSPKLHLPEHSFPNDPVKLH*HDGGPG Trigger: ACCGGGACCACCATCATGGCAGTGGAGTTTGACGGG...GTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR CCA 90 bp | GGGAAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGTGCCGGAGCCACCAATaGCAAAAGGCTGTCGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GKHPPPLSSISLSTHFPMCRSHQ*QKAVES Trigger: TGACTCGACAGCCTTTTGCCATTGGTGGCTCCGGCA...CATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR TCA 90 bp | GAAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCCCAGCCAGCTACCATaGGATGTGCAGACAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: EAPTSPKLHLPEHSFPNDPSQLP*DVQTSP Trigger: AGGACTTGTCTGCACATCTCATGGTAGCTGGCTGGG...GTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR CCA 90 bp | CACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCATAATGTCGGCCACGGCTTaGGCATCAGCAGCTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: HPPPLSSISLSTHFPMTIMSATA*ASAAEP Trigger: TGGTTCAGCTGCTGATGCCCAAGCCGTGGCCGACAT...TATGGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR CCA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCCCCAAGATGACTCGATaGTCCACACCGGCAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: KHPPPLSSISLSTHFPMTPKMTR*STPAAV Trigger: TACAGCTGCCGGTGTGGACCATCGAGTCATCTTGGG...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR TCA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCAGGGTTCCATATACCTaGCCTCCTTCACGTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KHPPPLSSISLSTHFPMTRVPYT*PPSRWS Trigger: GGACCAACGTGAAGGAGGTCAGGTATATGGAACCCT...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR GCA 90 bp | TGCGGCCTCATCATCATGGACCGCATGATGATGCGGAATGAGAATTTTTATTGTCGCCCGCAGCATCCCTaGAAGGCACCGCTCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: CGLIIMDRMMMRNENFYCRPQHP*KAPLSS Trigger: CGAGGAGAGCGGTGCCTTGCAGGGATGCTGCGGGCG...ACAATAAAAATTCTCATTCCGCATCATCATGCGGTCCATGATGATGAGGCCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR CCA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCCTCGGGAGACATGCCTaGCTTATATGCTGCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: KHPPPLSSISLSTHFPMTLGRHA*LICCIH Trigger: GTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAG...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR GCA 90 bp | GGGAAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGAGCTACCATGAGATGTaGAGACAAGTCCTCTCGATA | + |
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Preference number: 4 (lower is better) Translates to: GKHPPPLSSISLSTHFPMSYHEM*RQVLSI Trigger: TATCGAGAGGACTTGTCTGCACATCTCATGGTAGCT...CATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR CCA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCAGCAGCCAAAACAAGTaGAGGTTCCTCCAGTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: KHPPPLSSISLSTHFPMTSSQNK*RFLQFY Trigger: ATAGAACTGGAGGAACCTCCACTTGTTTTGGCTGCT...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR TCA 90 bp | GGGAAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGAAATCATTCAGTACGTaGTCACCTGTCATGTATAGG | + |
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Preference number: 4 (lower is better) Translates to: GKHPPPLSSISLSTHFPMKSFST*SPVMYR Trigger: CCTATACATGACAGGTGATCACGTACTGAATGATTT...CATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR GCA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCATTTCTCACCACATTTaGAGCAGCCAAAACAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KHPPPLSSISLSTHFPMTISHHI*SSQNKW Trigger: CCACTTGTTTTGGCTGCTGCAAATGTGGTGAGAAAT...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR GCA 90 bp | GAAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACGCCTGGCTTATATGCTaGATCCACATAACCATAGAT | + |
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Preference number: 4 (lower is better) Translates to: EAPTSPKLHLPEHSFPNDAWLIC*IHITID Trigger: ATCTATGGTTATGTGGATGCAGCATATAAGCCAGGC...GTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR GCA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCCATGCCTGGCTTATATaGTGCATCCACATAACCATA | + |
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Preference number: 4 (lower is better) Translates to: KHPPPLSSISLSTHFPMTHAWLI*CIHITI Trigger: TATGGTTATGTGGATGCAGCATATAAGCCAGGCATG...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR GCA 90 bp | TGCGGCCTCATCATCATGGACCGCATGATGATGCGGAATGAGAATTTTTATTGTACTCCTCGGGAGACATaGCTGGCTTATATGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: CGLIIMDRMMMRNENFYCTPRET*LAYMLH Trigger: ATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGT...ACAATAAAAATTCTCATTCCGCATCATCATGCGGTCCATGATGATGAGGCCGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR CCA 90 bp | CACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCATACTCATCATAGAATTTTaGCAGTTCATTGCCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: HPPPLSSISLSTHFPMTILIIEF*QFIAQD Trigger: ATCTTGGGCAATGAACTGCCAAAATTCTATGATGAG...TATGGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS CCA 90 bp | CTCCCGCCCGCAGCATCCCTGCAAGGCACCGCTCTCCTCGCCGCCTaGGGCACTGGTTTCCAACCTGGGACAGCGCACAACGCGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: LPPAASLQGTALLAA*GTGFQPGTAHNAQP Trigger: CGGCTGCGCGTTGTGCGCTGTCCCAGGTTGGAAACCAGTGCCCCAGGCGGCGAGGAGAGCGGTGCCTTGCAGGGATGCTGCGGGCGGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CCA 90 bp | CGCAGCATCCCTGCAAGGCACCGCTCTCCTCGCCGCCTGGGGCACTaGTTTCCAACCTGGGACAGCGCACAACGCGCAGCCGACAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RSIPARHRSPRRLGH*FPTWDSAQRAADSP Trigger: GGGGCTGTCGGCTGCGCGTTGTGCGCTGTCCCAGGTTGGAAACCAGTGCCCCAGGCGGCGAGGAGAGCGGTGCCTTGCAGGGATGCTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS TCA 90 bp | AGCCCTCCCCAGGTACCCTTCCACTTGGCTGGTTACCGTCTGTGGTaGAGCGCCTGCACTCCTCGGGAGACATGCCTGGCTTATATGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPPQVPFHLAGYRLW*SACTPRETCLAYML Trigger: CAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACAGACGGTAACCAGCCAAGTGGAAGGGTACCTGGGGAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS TCA 90 bp | CACACCGGCAGCTGTAATAGTGACCAGGTAGATGACACCCCCGCTTaGGCCATCCCGGCTCATGGCCAGAGCAATAGCGTCTGTGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: HTGSCNSDQVDDTPA*AIPAHGQSNSVCGE Trigger: TTCACCACAGACGCTATTGCTCTGGCCATGAGCCGGGATGGCTCAAGCGGGGGTGTCATCTACCTGGTCACTATTACAGCTGCCGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399607.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000451862.5 ENST00000453059.6 |
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| CDS CCA 90 bp | GCACACTGTACAGGGATTCATGCAGGTTGGGGGAGCTCTAGTGGGTaGGGAGTCAGAACTCCAGAGCTTCATACCCATGGAGCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: AHCTGIHAGWGSSSG*GVRTPELHTHGAPA Trigger: AGCTGGAGCTCCATGGGTATGAAGCTCTGGAGTTCTGACTCCCCACCCACTAGAGCTCCCCCAACCTGCATGAATCCCTGTACAGTGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS-3UTR CAA 90 bp | AAGCACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCCTGACCTCCTTCACGTaGGTCCCAGCCAGCTACCAT | + |
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Preference number: 5 (lower is better) Translates to: KHPPPLSSISLSTHFPMTLTSFT*VPASYH Trigger: ATGGTAGCTGGCTGGGACCAACGTGAAGGAGGTCAG...GGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS GCA 90 bp | TGTGGTGAAGCGCCTGCACTCCTCGGGAGACATGCCTGGCTTATATaGTGCATCCACATAACCATAGATAAAGGTGCTGCCGGAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: CGEAPALLGRHAWLI*CIHITIDKGAAGAT Trigger: GGTGGCTCCGGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 39 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000418861.2 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS CCA 90 bp | TGTCCAGCTCCTGGAACAGCACACTGTACAGGGATTCATGCAGGTTaGGGGAGCTCTAGTGGGTGGGGAGTCAGAACTCCAGAGCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: CPAPGTAHCTGIHAG*GSSSGWGVRTPELH Trigger: ATGAAGCTCTGGAGTTCTGACTCCCCACCCACTAGAGCTCCCCCAACCTGCATGAATCCCTGTACAGTGTGCTGTTCCAGGAGCTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS-3UTR CAA 90 bp | TGCGGCCTCATCATCATGGACCGCATGATGATGCGGAATGAGAATTTTTATTGTGGGGTAAGTCCCCGGTaGGTGCTCCCGCCCGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CGLIIMDRMMMRNENFYCGVSPR*VLPPAA Trigger: TGCTGCGGGCGGGAGCACCAACCGGGGACTTACCCC...ACAATAAAAATTCTCATTCCGCATCATCATGCGGTCCATGATGATGAGGCCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS-3UTR CAA 90 bp | CACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCATATGCAGCGGGGACAGCTaGTCAAACACTCGGTTCACC | + |
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Preference number: 5 (lower is better) Translates to: HPPPLSSISLSTHFPMTICSGDS*SNTRFT Trigger: GGTGAACCGAGTGTTTGACAAGCTGTCCCCGCTGCA...TATGGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS GCA 90 bp | GGTGAAGCGCCTGCACTCCTCGGGAGACATGCCTGGCTTATATGCTaGATCCACATAACCATAGATAAAGGTGCTGCCGGAGCCACCAAT | + |
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Preference number: 5 (lower is better) Translates to: GEAPALLGRHAWLIC*IHITIDKGAAGATN Trigger: ATTGGTGGCTCCGGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 39 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000418861.2 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS CCA 90 bp | AGTAGCGTCTGTGGTGAAGCGCCTGCACTCCTCGGGAGACATGCCTaGCTTATATGCTGCATCCACATAACCATAGATAAAGGTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SSVCGEAPALLGRHA*LICCIHITIDKGAA Trigger: GGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACAGACGCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000399381.3 ENST00000399619.3 ENST00000418861.2 ENST00000423563.2 ENST00000425855.2 ENST00000445315.2 ENST00000448066.2 |
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| CDS CCA 90 bp | GTTACCGTCTGTGGTGAAGCGCCTGCACTCCTCGGGAGACATGCCTaGCTTATATGCTGCATCCACATAACCATAGATAAAGGTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: VTVCGEAPALLGRHA*LICCIHITIDKGAA Trigger: GGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACAGACGGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS CCA 90 bp | GCAAGAGCCGAAACAAGACTTTTCCATTTCCCAGTGTCCAGCTCCTaGAACAGCACACTGTACAGGGATTCATGCAGGTTGGGGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: ARAETRLFHFPVSSS*NSTLYRDSCRLGEL Trigger: GAGCTCCCCCAACCTGCATGAATCCCTGTACAGTGTGCTGTTCCAGGAGCTGGACACTGGGAAATGGAAAAGTCTTGTTTCGGCTCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CCA 90 bp | AATAGCGTCTGTGGTGAAGCGCCTGCACTCCTCGGGAGACATGCCTaGCTTATATGCTGCATCCACATAACCATAGATAAAGGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSVCGEAPALLGRHA*LICCIHITIDKGAA Trigger: GGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACAGACGCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399607.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000451862.5 ENST00000453059.6 |
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| CDS-3UTR CAA 90 bp | CACCCACCTCCCCTAAGCTCCATCTCCCTGAGCACTCATTTCCCAATGACCATAAATTTTGGCAGTTCATaGCCCAAGATGACTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: HPPPLSSISLSTHFPMTINFGSS*PKMTRW Trigger: CCATCGAGTCATCTTGGGCAATGAACTGCCAAAATT...TATGGTCATTGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS GCA 90 bp | TACCTGACCTCCTTCACGTTGGTCCCAGCCAGCTACCATGAGATGTaGAGACAAGTCCTCTCGATATTTATAGCTGATATTTCTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: YLTSFTLVPASYHEM*RQVLSIFIADISHH Trigger: GTGGTGAGAAATATCAGCTATAAATATCGAGAGGACTTGTCTGCACATCTCATGGTAGCTGGCTGGGACCAACGTGAAGGAGGTCAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 47 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000413480.5 ENST00000414474.5 ENST00000415658.5 ENST00000417566.5 ENST00000418861.2 ENST00000419512.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000434587.5 ENST00000438515.5 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000455846.5 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS CCA 90 bp | AATAAGAAAGAGAAGTCTGGGGAAGGTTCACTCATCATAGAATTTTaGCAGTTCATTGCCCAAGATGACTCGATGGTCCACACCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NKKEKSGEGSLIIEF*QFIAQDDSMVHTGS Trigger: GCTGCCGGTGTGGACCATCGAGTCATCTTGGGCAATGAACTGCCAAAATTCTATGATGAGTGAACCTTCCCCAGACTTCTCTTTCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399607.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000451862.5 ENST00000453059.6 |
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| CDS GCA 90 bp | AGACAAGTCCTCTCGATATTTATAGCTGATATTTCTCACCACATTTaGAGCAGCCAAAACAAGTGGAGGTTCCTCCAGTTCTATCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RQVLSIFIADISHHI*SSQNKWRFLQFYPC Trigger: GCAGGGATAGAACTGGAGGAACCTCCACTTGTTTTGGCTGCTGCAAATGTGGTGAGAAATATCAGCTATAAATATCGAGAGGACTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000399381.3 ENST00000399619.3 ENST00000418861.2 ENST00000423563.2 ENST00000425855.2 ENST00000445315.2 ENST00000448066.2 |
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| CDS GCA 90 bp | AGACAAGTCCTCTCGATATTTATAGCTGATATTTCTCACCACATTTaGAGCAGCCAAAACAAGTGGAGGTTCCTCCAGTTCTATCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RQVLSIFIADISHHI*SSQNKWRFLQFYPM Trigger: CATGGGATAGAACTGGAGGAACCTCCACTTGTTTTGGCTGCTGCAAATGTGGTGAGAAATATCAGCTATAAATATCGAGAGGACTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 32 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399607.5 ENST00000413480.5 ENST00000414474.5 ENST00000415658.5 ENST00000417566.5 ENST00000419512.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000434587.5 ENST00000438515.5 ENST00000439630.5 ENST00000444284.6 ENST00000451862.5 ENST00000453059.6 ENST00000455846.5 ENST00000461032.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000478114.1 ENST00000487731.1 ENST00000490255.1 ENST00000496665.1 |
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| CDS GCA 90 bp | AGACAAGTCCTCTCGATATTTATAGCTGATATTTCTCACCACATTTaGAGCAGCCAAAACAAGTGGAGGTTCCTCCAGTTCTATCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQVLSIFIADISHHI*SSQNKWRFLQFYPE Trigger: CTCAGGATAGAACTGGAGGAACCTCCACTTGTTTTGGCTGCTGCAAATGTGGTGAGAAATATCAGCTATAAATATCGAGAGGACTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS-3UTR CAA 90 bp | TGCGGCCTCATCATCATGGACCGCATGATGATGCGGAATGAGAATTTTTATTGTACTCATCATAGAATTTaGGCAGTTCATTGCCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CGLIIMDRMMMRNENFYCTHHRI*AVHCPR Trigger: TCTTGGGCAATGAACTGCCAAAATTCTATGATGAGT...ACAATAAAAATTCTCATTCCGCATCATCATGCGGTCCATGATGATGAGGCCGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374859.3 |
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| CDS GCA 90 bp | TGTTCACATATAGAACGTGGTTCTCAAAATAACCGTCTCATGAGGTaGTATATTATCTCCACTTTACAGATGCAGAAACTGACAGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSHIERGSQNNRLMR*YIISTLQMQKLTDS Trigger: TGAATCTGTCAGTTTCTGCATCTGTAAAGTGGAGATAATATAGCACCTCATGAGACGGTTATTTTGAGAACCACGTTCTATATGTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488916.1 ENST00000490282.1 ENST00000495780.1 |
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| CDS CAA 72 bp | CGGTGTGGACTTCTCCCGCCCGGGGTAAGTCCCCGGTaGGTGCTCCCGCCCGCAGCATCCCTGCAAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RCGLLPPGVSPR*VLPPAASLQGT Trigger: GGTGCCTTGCAGGGATGCTGCGGGCGGGAGCACCAACCGGGGACTTACCCCGGGCGGGAGAAGTCCACACCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000418861.2 ENST00000422729.6 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434471.6 ENST00000444284.6 ENST00000453059.6 ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CAA 90 bp | TGGTGGTCCCGGTGTGGACTTCTCCCGCCCGGGGTAAGTCCCCGGTaGGTGCTCCCGCCCGCAGCATCCCTGCAAGGCACCGCTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WWSRCGLLPPGVSPR*VLPPAASLQGTALL Trigger: GAGGAGAGCGGTGCCTTGCAGGGATGCTGCGGGCGGGAGCACCAACCGGGGACTTACCCCGGGCGGGAGAAGTCCACACCGGGACCACCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000418861.2 ENST00000422729.6 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434471.6 ENST00000444284.6 ENST00000453059.6 ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CCA 72 bp | CCTGCAAGGCACCGCTCTCCTCGCCGCCTGGGGCACTaGTTTCCAACCTGGGACAGCGCACAACGCGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PARHRSPRRLGH*FPTWDSAQRAA Trigger: GGCTGCGCGTTGTGCGCTGTCCCAGGTTGGAAACCAGTGCCCCAGGCGGCGAGGAGAGCGGTGCCTTGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CCA 72 bp | GCAGCATCCCTGCAAGGCACCGCTCTCCTCGCCGCCTaGGGCACTGGTTTCCAACCTGGGACAGCGCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: AASLQGTALLAA*GTGFQPGTAHN Trigger: GTTGTGCGCTGTCCCAGGTTGGAAACCAGTGCCCCAGGCGGCGAGGAGAGCGGTGCCTTGCAGGGATGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000383114.8 ENST00000383234.8 ENST00000422729.6 ENST00000427870.6 ENST00000434471.6 ENST00000444284.6 ENST00000453059.6 ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS TCA 72 bp | CAGGTACCCTTCCACTTGGCTGGTTACCGTCTGTGGTaGAGCGCCTGCACTCCTCGGGAGACATGCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QVPFHLAGYRLW*SACTPRETCLA Trigger: AGCCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACAGACGGTAACCAGCCAAGTGGAAGGGTACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS TCA 72 bp | GCGCCTGTTCCTTTCTCGCTTTCTTCGGAAGACCCTTaGCCCATCATTCCCCCGACCCCCATAACGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: APVPFSLSSEDP*PIIPPTPITGE Trigger: CTCTCCCGTTATGGGGGTCGGGGGAATGATGGGTCAAGGGTCTTCCGAAGAAAGCGAGAAAGGAACAGGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENST00000395330.5 ENST00000399371.5 ENST00000399607.5 ENST00000420182.5 ENST00000422904.5 ENST00000434083.5 ENST00000439630.5 ENST00000451862.5 |
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| CDS CAA 72 bp | GGCGCCTGTTCCTTTCTCGCTTTCTTCGGAAGACCCTaGACCCATCATTCCCCCGACCCCCATAACGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GACSFLAFFGRP*THHSPDPHNGR Trigger: TCTCCCGTTATGGGGGTCGGGGGAATGATGGGTCAAGGGTCTTCCGAAGAAAGCGAGAAAGGAACAGGCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENST00000395330.5 ENST00000399371.5 ENST00000399607.5 ENST00000420182.5 ENST00000422904.5 ENST00000434083.5 ENST00000439630.5 ENST00000451862.5 |
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| CDS TCA 72 bp | AGCTGTAATAGTGACCAGGTAGATGACACCCCCGCTTaGGCCATCCCGGCTCATGGCCAGAGCAATAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: SCNSDQVDDTPA*AIPAHGQSNSV Trigger: GACGCTATTGCTCTGGCCATGAGCCGGGATGGCTCAAGCGGGGGTGTCATCTACCTGGTCACTATTACAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399607.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000451862.5 ENST00000453059.6 |
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| CDS GCA 72 bp | GCGCCTGCACTCCTCGGGAGACATGCCTGGCTTATATaGTGCATCCACATAACCATAGATAAAGGTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: APALLGRHAWLI*CIHITIDKGAA Trigger: GGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 39 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000418861.2 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS CAA 72 bp | TCCTCCCAGGGTTCCATATACCTGACCTCCTTCACGTaGGTCCCAGCCAGCTACCATGAGATGTGCAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: SSQGSIYLTSFT*VPASYHEMCRQ Trigger: TTGTCTGCACATCTCATGGTAGCTGGCTGGGACCAACGTGAAGGAGGTCAGGTATATGGAACCCTGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 47 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000413480.5 ENST00000414474.5 ENST00000415658.5 ENST00000417566.5 ENST00000418861.2 ENST00000419512.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000434587.5 ENST00000438515.5 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000455846.5 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS GCA 72 bp | CCTGCACTCCTCGGGAGACATGCCTGGCTTATATGCTaGATCCACATAACCATAGATAAAGGTGCTGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PALLGRHAWLIC*IHITIDKGAAG Trigger: TCCGGCAGCACCTTTATCTATGGTTATGTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 39 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000418861.2 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS TCA 72 bp | CCTGACCTCCTTCACGTTGGTCCCAGCCAGCTACCATaGGATGTGCAGACAAGTCCTCTCGATATTTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: PDLLHVGPSQLP*DVQTSPLDIYS Trigger: GCTATAAATATCGAGAGGACTTGTCTGCACATCTCATGGTAGCTGGCTGGGACCAACGTGAAGGAGGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 47 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000413480.5 ENST00000414474.5 ENST00000415658.5 ENST00000417566.5 ENST00000418861.2 ENST00000419512.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000434587.5 ENST00000438515.5 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000455846.5 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS CAA 90 bp | GTCCCACACCACCAACTGGTAAGAAGCTTTCAATTGCTCACTCTTTaGCTCAGCCCCACCCACATAACTTTCTTTTGGCTGCAAGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: VPHHQLVRSFQLLTL*LSPTHITFFWLQGP Trigger: GGGTCCTTGCAGCCAAAAGAAAGTTATGTGGGTGGGGCTGAGCAAAAGAGTGAGCAATTGAAAGCTTCTTACCAGTTGGTGGTGTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CCA 72 bp | TGTGGTGAAGCGCCTGCACTCCTCGGGAGACATGCCTaGCTTATATGCTGCATCCACATAACCATAGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: CGEAPALLGRHA*LICCIHITIDK Trigger: TTTATCTATGGTTATGTGGATGCAGCATATAAGCCAGGCATGTCTCCCGAGGAGTGCAGGCGCTTCACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 39 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000418861.2 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS CCA 72 bp | GAAACAAGACTTTTCCATTTCCCAGTGTCCAGCTCCTaGAACAGCACACTGTACAGGGATTCATGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ETRLFHFPVSSS*NSTLYRDSCRL Trigger: CAACCTGCATGAATCCCTGTACAGTGTGCTGTTCCAGGAGCTGGACACTGGGAAATGGAAAAGTCTTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CAA 90 bp | GTGCTTAGCACACCACTGGTTCTCACAGTGACTGTGTATCCTCATTaGATTTACTCAGAACAGCCCTGGTTTATCCGTATTGCCCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLSTPLVLTVTVYPH*IYSEQPWFIRIAQE Trigger: CTCTTGGGCAATACGGATAAACCAGGGCTGTTCTGAGTAAATCAAATGAGGATACACAGTCACTGTGAGAACCAGTGGTGTGCTAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000488916.1 ENST00000490282.1 ENST00000495780.1 |
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| CDS GCA 72 bp | CTTTCCAAATGCATACATCTTCACTTTTACTCACCCTaGAGACACTCGGGAATCAGAACCCATCACAACGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSKCIHLHFYSP*RHSGIRTHHNA Trigger: GGCGTTGTGATGGGTTCTGATTCCCGAGTGTCTGCAGGGTGAGTAAAAGTGAAGATGTATGCATTTGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CAA 90 bp | GTGCTTAGCACACCACTGGTTCTCACAGTGACTGTGTATCCTCATTaGATTTACTCAGAACAGCCCTGGTTTATCCGTATTGCCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VLSTPLVLTVTVYPH*IYSEQPWFIRIAQE Trigger: TTCTTGGGCAATACGGATAAACCAGGGCTGTTCTGAGTAAATCAAATGAGGATACACAGTCACTGTGAGAACCAGTGGTGTGCTAAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000493704.1 |
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| CDS GCA 72 bp | TCCTTCACGTTGGTCCCAGCCAGCTACCATGAGATGTaGAGACAAGTCCTCTCGATATTTATAGCTGATATT | + |
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Preference number: 6 (lower is better) Translates to: SFTLVPASYHEM*RQVLSIFIADI Trigger: AATATCAGCTATAAATATCGAGAGGACTTGTCTGCACATCTCATGGTAGCTGGCTGGGACCAACGTGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 47 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000413480.5 ENST00000414474.5 ENST00000415658.5 ENST00000417566.5 ENST00000418861.2 ENST00000419512.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000434587.5 ENST00000438515.5 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000455846.5 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS TCA 72 bp | CCATTCCTCCAAGGCTCCAGTTTGCCAGTCTTTTCATaGATGGGTAAGGAAAGTGTGTATTTGAGGCCATTA | + |
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Preference number: 6 (lower is better) Translates to: PFLQGSSLPVFS*MGKESVYLRPL Trigger: TAATGGCCTCAAATACACACTTTCCTTACCCATTCATGAAAAGACTGGCAAACTGGAGCCTTGGAGGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS GCA 72 bp | CTCTCGATATTTATAGCTGATATTTCTCACCACATTTaGAGCAGCCAAAACAAGTGGAGGTTCCTCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSIFIADISHHI*SSQNKWRFLQF Trigger: GAACTGGAGGAACCTCCACTTGTTTTGGCTGCTGCAAATGTGGTGAGAAATATCAGCTATAAATATCGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 47 transcripts: ENST00000374859.3 ENST00000383114.8 ENST00000383234.8 ENST00000395330.5 ENST00000399371.5 ENST00000399381.3 ENST00000399607.5 ENST00000399619.3 ENST00000413480.5 ENST00000414474.5 ENST00000415658.5 ENST00000417566.5 ENST00000418861.2 ENST00000419512.5 ENST00000420182.5 ENST00000422729.6 ENST00000422904.5 ENST00000423563.2 ENST00000425855.2 ENST00000427870.6 ENST00000434083.5 ENST00000434471.6 ENST00000434587.5 ENST00000438515.5 ENST00000439630.5 ENST00000444284.6 ENST00000445315.2 ENST00000448066.2 ENST00000451862.5 ENST00000453059.6 ENST00000455846.5 ENST00000461032.1 ENST00000464863.1 ENST00000465469.1 ENST00000467593.1 ENST00000468188.1 ENST00000471670.1 ENST00000473852.1 ENST00000478114.1 ENST00000484631.1 ENST00000487731.1 ENST00000488916.1 ENST00000490255.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 ENST00000496665.1 |
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| CDS CAA 72 bp | ACACCACTGGTTCTCACAGTGACTGTGTATCCTCATTaGATTTACTCAGAACAGCCCTGGTTTATCCGTATT | + |
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Preference number: 6 (lower is better) Translates to: TPLVLTVTVYPH*IYSEQPWFIRI Trigger: AATACGGATAAACCAGGGCTGTTCTGAGTAAATCAAATGAGGATACACAGTCACTGTGAGAACCAGTGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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| CDS CCA 72 bp | CTTGACAGAATCATCTTTTTGATCCCTAAGCACAGATaGAAAGAAGACCCTCAAAAATCTATCTCCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LDRIIFLIPKHR*KEDPQKSISCP Trigger: GGGACAGGAGATAGATTTTTGAGGGTCTTCTTTCCATCTGTGCTTAGGGATCAAAAAGATGATTCTGTCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENST00000464863.1 ENST00000465469.1 ENST00000473852.1 ENST00000484631.1 ENST00000488916.1 ENST00000490282.1 ENST00000493704.1 ENST00000495780.1 |
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