Pregenerated sensors for PSMB6 (Homo sapiens)
Ensembl gene IDs: ENSG00000142507Ensembl transcript IDs: ENST00000270586.8, ENST00000571309.1, ENST00000575079.1, ENST00000575643.1, ENST00000614486.4
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTaGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATG | + |
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Preference number: 1 (lower is better) Translates to: RIQAGGKVATANLGI*SPKSTCRSTPDSAM Trigger: CATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| 3UTR CCA 90 bp | AGAATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTaGGTATCTGGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: RIPGFRRVVKWQRRI*VSGLPKVLAALPLT Trigger: AGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| 3UTR CCA 90 bp | CTCTTATTGCATACTAGAATCCCAGGATTCAGGCGGGTGGTAAAGTaGCAACGGCGAATTTGGGTATCTGGTCTCCCAAAAGTACTTGCC | + |
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Preference number: 1 (lower is better) Translates to: LLLHTRIPGFRRVVK*QRRIWVSGLPKVLA Trigger: GGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGATTCTAGTATGCAATAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTGGCAGACACTCTTCCTTaGTCATGCCTTCCCGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: TPPLEPSRSMAKARALAVADTLP*SCLPGR Trigger: CCTACCGGGAAGGCATGACCAAGGAAGAGTGTCTGC...CACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| 3UTR-3UTR GCA 90 bp | CCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTGAATTGCTTGAGGGTCCCAGCCTaGGATGATGATTCCCGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PLEPSRSMAKARALAVNCLRVPA*DDDSRH Trigger: ATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAA...GCAATTCACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| 3UTR-3UTR TCA 90 bp | TCCATGGCCAAAGCGAGAGCATTGGCAGTGAATTGCAGACACTCTTCCTTGGTCACCTGCCCTCCTTCTTaGGGGTCCCAGCCTGCGATG | + |
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Preference number: 2 (lower is better) Translates to: SMAKARALAVNCRHSSLVTCPPS*GSQPAM Trigger: CATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGT...GACCAAGGAAGAGTGTCTGCAATTCACTGCCAATGCTCTCGCTTTGGCCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| 3UTR-3UTR GCA 90 bp | GGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTGGTCTCCCACAGGGCATCTCTTATTaGATACTAGAATCCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GFRRVVKWQRRIWVSGLPQGISY*ILESQD Trigger: ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTG...TGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| 3UTR CAA 90 bp | GTGACAAACTTTATTAAATTTTGCATCAGTACAGGGCATCTCTTATaGCATACTAGAATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: VTNFIKFCISTGHLL*HTRIPGFRRVVKWQ Trigger: TTGCCACTTTACCACCCGCCTGAATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAAAGTTTGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| 3UTR GCA 72 bp | ACGGCGAATTTGGGTATCTGGTCTCCCAAAAGTACTTaGCGCTCTACCCCTGACTCTGCAATGGCTGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: TANLGIWSPKST*RSTPDSAMAAR Trigger: CCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| 3UTR CCA 72 bp | GCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTaGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: AGGKVATANLGI*SPKSTCRSTPD Trigger: GTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| 3UTR CCA 72 bp | CATACTAGAATCCCAGGATTCAGGCGGGTGGTAAAGTaGCAACGGCGAATTTGGGTATCTGGTCTCCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: HTRIPGFRRVVK*QRRIWVSGLPK Trigger: TTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGATTCTAGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| 3UTR-3UTR CAA 90 bp | AGAATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTACAGGGCATCTCTTATaGCATACTAGAATCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: RIPGFRRVVKWQRRIWVSTGHLL*HTRIPG Trigger: TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGT...AGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR TCA 90 bp | TCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATGGCTGCCAGGCGGTTTCCCAGTCTGGAGTaGACGCCTCCGGCCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SPKSTCRSTPDSAMAARRFPSLE*TPPAPK Trigger: CTTGGGGGCCGGAGGCGTTCACTCCAGACTGGGAAA...CCGCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR TCA 90 bp | ATCACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAACCTGCCCTCCTTCTTaGGGGTCCCAGCCTGCGATG | + |
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Preference number: 4 (lower is better) Translates to: ITPPLEPSRSMAKARALATCPPS*GSQPAM Trigger: CATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGT...TGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | CACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTCGATGTAGGACCCAGTaGTTGTTCTGGAGTCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: HSSTGAIPLHGQSESIGSRCRTQ*LFWSPP Trigger: GGGCGGACTCCAGAACAACCACTGGGTCCTACATCG...ACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | ATCACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGGATCACTCCTCCACTaGAGCCATCCCGCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: ITPPLEPSRSMAKARALAGSLLH*SHPAPW Trigger: CCATGGAGCGGGATGGCTCCAGTGGAGGAGTGATCC...TGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATGGCTGCCAGGCCCCCTGACTCTGCAATaGCTGCCAGGCGGATCACTC | + |
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Preference number: 4 (lower is better) Translates to: GLPKVLAALPLTLQWLPGPLTLQ*LPGGSL Trigger: GAGTGATCCGCCTGGCAGCCATTGCAGAGTCAGGGG...GCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR GCA 90 bp | ACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTGTTGAGGGTCCCAGCCTaGGATGATGATTCCCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TPPLEPSRSMAKARALAVLRVPA*DDDSRH Trigger: ATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAA...CACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | CACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTTCCCGGAGCCTCCAATaGCAAAGGACTGCCTTACCA | + |
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Preference number: 4 (lower is better) Translates to: HSSTGAIPLHGQSESIGSSRSLQ*QRTALP Trigger: TGGTAAGGCAGTCCTTTGCCATTGGAGGCTCCGGGA...ACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | GGCAGTGAATTGCAGACACTCTTCCTTGGTCATGCCTTCCCGGTAGGTAGCATCTCGGCTTTCCCAGTCTaGAGTGAACGCCTCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GSELQTLFLGHAFPVGSISAFPV*SERLRP Trigger: GGGCCGGAGGCGTTCACTCCAGACTGGGAAAGCCGA...GATGCTACCTACCGGGAAGGCATGACCAAGGAAGAGTGTCTGCAATTCACTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | TTGAGGGTCCCAGCCTGCGATGATGATTCCCGCCATCAGGTCTTCCCGGTATCGGCAGACACTCTTCCTTaGTCATGCCTTCCCGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LRVPACDDDSRHQVFPVSADTLP*SCLPGR Trigger: CCTACCGGGAAGGCATGACCAAGGAAGAGTGTCTGC...CGATACCGGGAAGACCTGATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | TCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATGGCTGCCAGGCGGGCAGACACTCTTCCTTaGTCATGCCTTCCCGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SPKSTCRSTPDSAMAARRADTLP*SCLPGR Trigger: CCTACCGGGAAGGCATGACCAAGGAAGAGTGTCTGC...CCGCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | GGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTGGTCTCCCAAGCCATCCCGCTCCATaGCCAAAGCGAGAGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GFRRVVKWQRRIWVSGLPSHPAP*PKRELW Trigger: CCACAGCTCTCGCTTTGGCCATGGAGCGGGATGGCT...TGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR TCA 90 bp | CATACTAGAATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGACCTGCCCTCCTTCTTaGGGGTCCCAGCCTGCGATG | + |
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Preference number: 4 (lower is better) Translates to: HTRIPGFRRVVKWQRRIWTCPPS*GSQPAM Trigger: CATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGT...CCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGATTCTAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | AGAATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTTCGGCTTTCCCAGTCTaGAGTGAACGCCTCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RIPGFRRVVKWQRRIWVSSAFPV*SERLRP Trigger: GGGCCGGAGGCGTTCACTCCAGACTGGGAAAGCCGA...AGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATGGCTGCCAGGCAGGCGGGTGGTAAAGTaGCAACGGCGAATTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GLPKVLAALPLTLQWLPGRRVVK*QRRIWV Trigger: TACCCAAATTCGCCGTTGCCACTTTACCACCCGCCT...GCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR TCA 90 bp | CCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTGAATTGCCGAGAGCATTGGCAGTaGATTGCAGACACTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PLEPSRSMAKARALAVNCREHWQ*IADTLP Trigger: AGGAAGAGTGTCTGCAATTCACTGCCAATGCTCTCG...GCAATTCACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR TCA 90 bp | TTGGGTATCTGGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATGTTGCCGCTCTACCCCTaGCTCTGCAATGGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGIWSPKSTCRSTPDSAMLPLYP*LCNGCQ Trigger: CTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAA...CATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | CGGCGAATTTGGGTATCTGGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCGATGTAGGACCCAGTaGTTGTTCTGGAGTCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: RRIWVSGLPKVLAALPLTRCRTQ*LFWSPP Trigger: GGGCGGACTCCAGAACAACCACTGGGTCCTACATCG...AGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | TTCCCGGTAGGTAGCATCAACATAGCCATAGATGTAGGAGCTCCCGGAGCCTCCGCATCAGCTACTGCCTaGGTATCAGCAGCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: FPVGSINIAIDVGAPGASASATA*VSAAEP Trigger: AGGCTCAGCTGCTGATACCCAGGCAGTAGCTGATGC...GGAGGCTCCGGGAGCTCCTACATCTATGGCTATGTTGATGCTACCTACCGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| 3UTR CAA 72 bp | CCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTGAATaGCAGACACTCTTCCTTGGTCATGCCTTCCCGGTA | + |
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Preference number: 4 (lower is better) Translates to: PLHGQSESIGSE*QTLFLGHAFPV Trigger: TACCGGGAAGGCATGACCAAGGAAGAGTGTCTGCAATTCACTGCCAATGCTCTCGCTTTGGCCATGGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR TCA 90 bp | ACACTCTTCCTTGGTCATGCCTTCCCGGTAGGTAGCATCAACATAGCCATAGATTTTCCCAGTCTGGAGTaGACGCCTCCGGCCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TLFLGHAFPVGSINIAIDFPSLE*TPPAPK Trigger: CTTGGGGGCCGGAGGCGTTCACTCCAGACTGGGAAA...ATCTATGGCTATGTTGATGCTACCTACCGGGAAGGCATGACCAAGGAAGAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR GCA 90 bp | CCAGCCTGCGATGATGATTCCCGCCATCAGGTCTTCCCGGTATCGGTAACACATCTTAAAGAGGCTGGCTaGTGTGGAAACCGAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PACDDDSRHQVFPVSVTHLKEAG*CGNRAG Trigger: ACCAGCTCGGTTTCCACAGCAGCCAGCCTCTTTAAG...ATGTGTTACCGATACCGGGAAGACCTGATGGCGGGAATCATCATCGCAGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | TTCCCGGTAGGTAGCATCAACATAGCCATAGATGTAGGAGCTCCCGGAGCCTCCTGTCAGTCACTCGATTaGCGATGTAGGACCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: FPVGSINIAIDVGAPGASCQSLD*RCRTQW Trigger: CCACTGGGTCCTACATCGCCAATCGAGTGACTGACA...GGAGGCTCCGGGAGCTCCTACATCTATGGCTATGTTGATGCTACCTACCGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | CTCTTATTGCATACTAGAATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAACGGGGATCACTCCTCCACTaGAGCCATCCCGCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: LLLHTRIPGFRRVVKWQRGSLLH*SHPAPW Trigger: CCATGGAGCGGGATGGCTCCAGTGGAGGAGTGATCC...CCGTTGCCACTTTACCACCCGCCTGAATCCTGGGATTCTAGTATGCAATAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR TCA 90 bp | GGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATGGCTGCCAGGCAGAAAGCATTGGCAGTaGATTGCAGACACTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GLPKVLAALPLTLQWLPGRKHWQ*IADTLP Trigger: AGGAAGAGTGTCTGCAATTCACTGCCAATGCTTTCT...GCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR GCA 90 bp | AGAATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTCTTAAAGAGGCTGGCTaGTGTGTGGACCAGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RIPGFRRVVKWQRRIWVSLKEAG*CVDQWR Trigger: CCTCCACTGGTCCACACAGCAGCCAGCCTCTTTAAG...AGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | GGTAAAGTGGCAACGGCGAATTTGGGTATCTGGTCTCCCAAAAGTACTTGCCGCGCATCAGCTACTGCCTaGGTATCAGCAGCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GKVATANLGIWSPKSTCRASATA*VSAAEP Trigger: AGGCTCAGCTGCTGATACCCAGGCAGTAGCTGATGC...GCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | CATGGCCAAAGCGAGAGCATTGGCAGTGAATTGCAGACACTCTTCCTTGGTCATAGCCATCCCGCTCCATaGCCAAAGCGAGAGCATTGG | + |
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Preference number: 4 (lower is better) Translates to: HGQSESIGSELQTLFLGHSHPAP*PKREHW Trigger: CCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCT...ATGACCAAGGAAGAGTGTCTGCAATTCACTGCCAATGCTCTCGCTTTGGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| 3UTR CAA 72 bp | AGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTaGGGTATCTGGTCTCCCAAAAGTACTTGCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RIQAGGKVATAN*GIWSPKSTCRS Trigger: AGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR TCA 90 bp | GCCTGCGATGATGATTCCCGCCATCAGGTCTTCCCGGTATCGGTAACACATCTCCAGAAAATGCGGTCGTaGATAGGTGTCAGCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: ACDDDSRHQVFPVSVTHLQKMRS*IGVSLS Trigger: TGACAAGCTGACACCTATTCACGACCGCATTTTCTG...GAGATGTGTTACCGATACCGGGAAGACCTGATGGCGGGAATCATCATCGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR TCA 90 bp | CATGGCCAAAGCGAGAGCATTGGCAGTGAATTGCAGACACTCTTCCTTGGTCATAACCGAGCTGGTAGGTaGCAGCATCAGCTACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: HGQSESIGSELQTLFLGHNRAGR*QHQLLP Trigger: AGGCAGTAGCTGATGCTGTCACCTACCAGCTCGGTT...ATGACCAAGGAAGAGTGTCTGCAATTCACTGCCAATGCTCTCGCTTTGGCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR TCA 90 bp | CGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTGGTCTCCCAAAAGTACTTAACCGAGCTGGTAGGTaGCAGCATCAGCTACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RVVKWQRRIWVSGLPKVLNRAGR*QHQLLP Trigger: AGGCAGTAGCTGATGCTGTCACCTACCAGCTCGGTT...AAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR GCA 90 bp | ATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTGGTTCTCCCAAAAGTACTTaGCGCTCTACCCCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: IPGFRRVVKWQRRIWVSGSPKST*RSTPDS Trigger: AGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGA...ACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | ACACTCTTCCTTGGTCATGCCTTCCCGGTAGGTAGCATCAACATAGCCATAGATACCCAGTGGTTGTTCTaGAGTCCGCCCCCAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: TLFLGHAFPVGSINIAIDTQWLF*SPPPEP Trigger: TGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGT...ATCTATGGCTATGTTGATGCTACCTACCGGGAAGGCATGACCAAGGAAGAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571309.1 |
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| CDS-3UTR CCA 90 bp | AGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTGGTCTCCCTGGCAACGGCGAATTTaGGTATCTGGTCTCCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: RIQAGGKVATANLGIWSPWQRRI*VSGLPK Trigger: TTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCA...GGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CCA 90 bp | GCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTCAGGCGGGTGTCAGTCACTCGATTaGCGATGTAGGACCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASVQGISYCILESQDSGGCQSLD*RCRTQW Trigger: CCACTGGGTCCTACATCGCCAATCGAGTGACTGACA...CCCGCCTGAATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | ATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTCAGGCGGGTGTCCCGGAGCCTCCAATaGCAAAGGACTGCCTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGHLLLHTRIPGFRRVSRSLQ*QRTALP Trigger: TGGTAAGGCAGTCCTTTGCCATTGGAGGCTCCGGGA...CACCCGCCTGAATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | GGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTGGTCTCCCAAAAGTACTTGCTGCTGTGTGGACCAGTaGAGGCTCATTCAGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGKVATANLGIWSPKSTCCCVDQ*RLIQFN Trigger: ATTGAACTGAATGAGCCTCCACTGGTCCACACAGCA...GCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTTACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
||
| CDS-3UTR TCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATACCTGCCCTCCTTCTTaGGGGTCCCAGCCTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDTCPPS*GSQPAM Trigger: CATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGT...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR GCA 90 bp | ATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTCAGGCGGGTGTTTCTCCTCCGGTACTaGCTCAAAGCAACTGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGHLLLHTRIPGFRRVFLLRY*LKATVV Trigger: TACGACAGTTGCTTTGAGGCAGTACCGGAGGAGAAA...CACCCGCCTGAATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
||
| CDS-3UTR TCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGTTTCCCAGTCTGGAGTaGACGCCTCCGGCCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQFPSLE*TPPAPK Trigger: CTTGGGGGCCGGAGGCGTTCACTCCAGACTGGGAAA...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR TCA 90 bp | ATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTGCCGCTCTACCCCTaGCTCTGCAATGGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKFCISTGHLLLHTRIPGLPLYP*LCNGCQ Trigger: CTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAA...TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGTCGGCTTTCCCAGTCTaGAGTGAACGCCTCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQSAFPV*SERLRP Trigger: GGGCCGGAGGCGTTCACTCCAGACTGGGAAAGCCGA...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATGGATCACTCCTCCACTaGAGCCATCCCGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDGSLLH*SHPAPW Trigger: CCATGGAGCGGGATGGCTCCAGTGGAGGAGTGATCC...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | ATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTCAGGCGGGTGGCGAATTTGGGTATCTaGTCTCCCAAAAGTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTGHLLLHTRIPGFRRVANLGI*SPKSTC Trigger: GCAAGTACTTTTGGGAGACCAGATACCCAAATTCGC...CACCCGCCTGAATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTGGGTATCTGGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATGCCAAAGCGAGAGCTGTaGATAAAAGAAGAAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LGIWSPKSTCRSTPDSAMPKREL*IKEESI Trigger: AATGCTTTCTTCTTTTATCCACAGCTCTCGCTTTGG...CATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATACCCAGTGGTTGTTCTaGAGTCCGCCCCCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDTQWLF*SPPPEP Trigger: TGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGT...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | ATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGACGATGTAGGACCCAGTaGTTGTTCTGGAGTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKFCISTGHLLLHTRIPGRCRTQ*LFWSPP Trigger: GGGCGGACTCCAGAACAACCACTGGGTCCTACATCG...TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | ATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGAAGCCATCCCGCTCCATaGCCAAAGCGAGAGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKFCISTGHLLLHTRIPGSHPAP*PKREHW Trigger: CCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCT...TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270586.8 |
||
| CDS-3UTR CCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGCCCCTGACTCTGCAATaGCTGCCAGGCGGATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQPLTLQ*LPGGSL Trigger: GAGTGATCCGCCTGGCAGCCATTGCAGAGTCAGGGG...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR GCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATCTTAAAGAGGCTGGCTaGTGTGTGGACCAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDLKEAG*CVDQWR Trigger: CCTCCACTGGTCCACACAGCAGCCAGCCTCTTTAAG...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR GCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTTGAGGGTCCCAGCCTaGGATGATGATTCCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDLRVPA*DDDSRH Trigger: ATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAA...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGAGGCTGGCTGCTGTGTaGACCAGTGGAGGCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQRLAAV*TSGGSF Trigger: GAATGAGCCTCCACTGGTCCACACAGCAGCCAGCCT...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | ATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATCCCGGAGCCTCCAATaGCAAAGGACTGCCTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: IKFCISTGHLLLHTRIPGSRSLQ*QRTALP Trigger: TGGTAAGGCAGTCCTTTGCCATTGGAGGCTCCGGGA...TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR TCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGAACCGAGCTGGTAGGTaGCAGCATCAGCTACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQNRAGR*QHQLLP Trigger: AGGCAGTAGCTGATGCTGTCACCTACCAGCTCGGTT...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTGTCAGTCACTCGATTaGCGATGTAGGACCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDCQSLD*RCRTQW Trigger: CCACTGGGTCCTACATCGCCAATCGAGTGACTGACA...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGCATCAGCTACTGCCTaGGTATCAGCAGCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQASATA*VSAAEP Trigger: AGGCTCAGCTGCTGATACCCAGGCAGTAGCTGATGC...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGCAGACACTCTTCCTTaGTCATGCCTTCCCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQADTLP*SCLPGR Trigger: CCTACCGGGAAGGCATGACCAAGGAAGAGTGTCTGC...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATAGGCGGGTGGTAAAGTaGCAACGGCGAATTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDRRVVK*QRRIWV Trigger: TACCCAAATTCGCCGTTGCCACTTTACCACCCGCCT...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR GCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTCTCCCAAAAGTACTTaGCGCTCTACCCCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDSPKST*RSTPDS Trigger: AGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGA...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR TCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGCGAGAGCATTGGCAGTaGATTGCAGACACTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQREHWQ*IADTLP Trigger: AGGAAGAGTGTCTGCAATTCACTGCCAATGCTCTCG...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270586.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTGCTGTGTGGACCAGTaGAGGCTCATTCAGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDCCVDQ*RLIQFN Trigger: ATTGAACTGAATGAGCCTCCACTGGTCCACACAGCA...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | ATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATGGCAACGGCGAATTTaGGTATCTGGTCTCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKFCISTGHLLLHTRIPGWQRRI*VSGLPK Trigger: TTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCA...TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR TCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGCAGAAAATGCGGTCGTaGATAGGTGTCAGCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQQKMRS*IGVSLS Trigger: TGACAAGCTGACACCTATTCACGACCGCATTTTCTG...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR GCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGCATTGGCAGTGAATTaGAGACACTCTTCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQALAVN*RHSSLV Trigger: GACCAAGGAAGAGTGTCTGCAATTCACTGCCAATGC...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATGCGAATTTGGGTATCTaGTCTCCCAAAAGTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNFASVQGISYCILESQDANLGI*SPKSTC Trigger: GCAAGTACTTTTGGGAGACCAGATACCCAAATTCGC...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| 3UTR CAA 72 bp | TTTATTAAATTTTGCATCAGTACAGGGCATCTCTTATaGCATACTAGAATCCCAGGATTCAGGCGGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FIKFCISTGHLL*HTRIPGFRRVV Trigger: TACCACCCGCCTGAATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614486.4 |
||
| CDS-3UTR GCA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGCAGGGCATCTCTTATTaGATACTAGAATCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNFASVQGISYCILESQQGISY*ILESQD Trigger: ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTG...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
||
| CDS CCA 90 bp | GGCCATGATAGTGGTCCCAGTGGAAACTTCTCGGCTTTCCCAGTCTaGAGTGAACGCCTCCGGCCCCCAAGCCGGTGCTGGCCCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GHDSGPSGNFSAFPV*SERLRPPSRCWPGS Trigger: GGAGCCGGGCCAGCACCGGCTTGGGGGCCGGAGGCGTTCACTCCAGACTGGGAAAGCCGAGAAGTTTCCACTGGGACCACTATCATGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000270586.8 ENST00000571309.1 ENST00000575079.1 ENST00000614486.4 |
||
| CDS-3UTR CAA 90 bp | ACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTGTGTAGGACCCAGTGGTaGTTCTGGAGTCCGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPPLEPSRSMAKARALAVCRTQW*FWSPPP Trigger: TGGGGGCGGACTCCAGAACAACCACTGGGTCCTACA...CACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571309.1 |
||
| CDS-3UTR CAA 90 bp | TTGAGGGTCCCAGCCTGCGATGATGATTCCCGCCATCAGGTCTTCCCGGTATCGCACCTGCCCTCCTTCTaGAGGGTCCCAGCCTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRVPACDDDSRHQVFPVSHLPSF*RVPACD Trigger: ATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTG...CGATACCGGGAAGACCTGATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
||
| CDS TCA 90 bp | TCAAGTGTGCTCTGGTCGGGTGGGGATCTGACCTGCCCTCCTTCTTaGGGGTCCCAGCCTGCGATGATGATTCCCGCCATCAGGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSVLWSGGDLTCPPS*GSQPAMMIPAIRSS Trigger: GGAAGACCTGATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTCAGATCCCCACCCGACCAGAGCACACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575643.1 |
||
| CDS GCA 90 bp | GTCGGGTGGGGATCTGACCTGCCCTCCTTCTTGAGGGTCCCAGCCTaGGATGATGATTCCCGCCATCAGGTCTTCCCGGTATCGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: VGWGSDLPSFLRVPA*DDDSRHQVFPVSVT Trigger: TGTTACCGATACCGGGAAGACCTGATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTCAGATCCCCACCCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575643.1 |
||
| CDS CCA 90 bp | TCTGGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATaGCTGCCAGGCGGATCACTCCTCCACTGGAGCCATCCCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLPKVLAALPLTLQ*LPGGSLLHWSHPAP Trigger: TGGAGCGGGATGGCTCCAGTGGAGGAGTGATCCGCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000270586.8 ENST00000575643.1 ENST00000614486.4 |
||
| CDS-3UTR CAA 90 bp | CACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTGCCAAAGCGAGAGCATaGGCAGTGAATTGCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: HSSTGAIPLHGQSESIGSAKARA*AVNCRH Trigger: GTGTCTGCAATTCACTGCCAATGCTCTCGCTTTGGC...ACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
||
| CDS TCA 90 bp | GAATTTGGGTATCTGGTCTCCCAAAAGTACTTGCCGCTCTACCCCTaGCTCTGCAATGGCTGCCAGGCGGATCACTCCTCCACTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EFGYLVSQKYLPLYP*LCNGCQADHSSTGA Trigger: GGCTCCAGTGGAGGAGTGATCCGCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000270586.8 ENST00000575643.1 ENST00000614486.4 |
||
| CDS CCA 90 bp | GGAAGATGGGAAGACCTTTCACAAATCTGTCCTGAGCTCACCCAGTaGTTGTTCTGGAGTCCGCCCCCAGAACCACGCCCCCGTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GRWEDLSQICPELTQ*LFWSPPPEPRPRQT Trigger: AGTTTGACGGGGGCGTGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGTGAGCTCAGGACAGATTTGTGAAAGGTCTTCCCATCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000575079.1 |
||
| CDS-3UTR CAA 90 bp | ACTCCTCCACTGGAGCCATCCCGCTCCATGGCCAAAGCGAGAGCATTGGCAGTGAGCATTGGCAGTGAATaGCAGACACTCTTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TPPLEPSRSMAKARALAVSIGSE*QTLFLG Trigger: ACCAAGGAAGAGTGTCTGCAATTCACTGCCAATGCT...CACTGCCAATGCTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571309.1 |
||
| CDS GCA 90 bp | AAAGTGGCAACGGCGAATTTGGGTATCTGGTCTCCCAAAAGTACTTaGCGCTCTACCCCTGACTCTGCAATGGCTGCCAGGCGGATCACT | + |
|
Preference number: 5 (lower is better) Translates to: KVATANLGIWSPKST*RSTPDSAMAARRIT Trigger: AGTGATCCGCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTTGCCACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000270586.8 ENST00000575643.1 ENST00000614486.4 |
||
| CDS TCA 90 bp | CAGGAAAGGAAAAGGAAGATGGGAAGACCTTTCACAAATCTGTCCTaGGCTCACCCAGTGGTTGTTCTGGAGTCCGCCCCCAGAACCACG | + |
|
Preference number: 5 (lower is better) Translates to: QERKRKMGRPFTNLS*AHPVVVLESAPRTT Trigger: CGTGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGTGAGCTCAGGACAGATTTGTGAAAGGTCTTCCCATCTTCCTTTTCCTTTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575079.1 |
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| CDS-3UTR CAA 90 bp | ATCCCAGGATTCAGGCGGGTGGTAAAGTGGCAACGGCGAATTTGGGTATCTGGTGTGGCAACGGCGAATTaGGGTATCTGGTCTCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: IPGFRRVVKWQRRIWVSGVATAN*GIWSPK Trigger: TTTGGGAGACCAGATACCCAAATTCGCCGTTGCCAC...ACCAGATACCCAAATTCGCCGTTGCCACTTTACCACCCGCCTGAATCCTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS GCA 90 bp | CAGGTCTTCCCGGTATCGGTAACACATCTCCTTAAAGAGGCTGGCTaGTGTGTGGACCAGTGGAGGCTCATTCAGTTCAATGCTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: QVFPVSVTHLLKEAG*CVDQWRLIQFNAVE Trigger: TTCCACAGCATTGAACTGAATGAGCCTCCACTGGTCCACACAGCAGCCAGCCTCTTTAAGGAGATGTGTTACCGATACCGGGAAGACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS CCA 90 bp | TCGGTAACACATCTCCTTAAAGAGGCTGGCTGCTGTGTGGACCAGTaGAGGCTCATTCAGTTCAATGCTGTGGAAACCGAGCTGGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: SVTHLLKEAGCCVDQ*RLIQFNAVETELVG Trigger: ACCTACCAGCTCGGTTTCCACAGCATTGAACTGAATGAGCCTCCACTGGTCCACACAGCAGCCAGCCTCTTTAAGGAGATGTGTTACCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS-3UTR CAA 90 bp | TTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATTCAGGCTGTAGGACCCAGTGGTaGTTCTGGAGTCCGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: FASVQGISYCILESQDSGCRTQW*FWSPPP Trigger: TGGGGGCGGACTCCAGAACAACCACTGGGTCCTACA...GCCTGAATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CAA 90 bp | ATCTGGTCTCCCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATGGCTGCCACAGGGCATCTCTTATaGCATACTAGAATCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: IWSPKSTCRSTPDSAMAATGHLL*HTRIPG Trigger: TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGT...GGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614486.4 |
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| CDS-3UTR CAA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATCACCTGCCCTCCTTCTaGAGGGTCCCAGCCTGCGAT | + |
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Preference number: 5 (lower is better) Translates to: LNFASVQGISYCILESQDHLPSF*RVPACD Trigger: ATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTG...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS-3UTR CAA 90 bp | ATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATGTAGGACCCAGTGGTaGTTCTGGAGTCCGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: IKFCISTGHLLLHTRIPGCRTQW*FWSPPP Trigger: TGGGGGCGGACTCCAGAACAACCACTGGGTCCTACA...TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS-3UTR CAA 90 bp | ATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGAGTGGCAACGGCGAATTaGGGTATCTGGTCTCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: IKFCISTGHLLLHTRIPGVATAN*GIWSPK Trigger: TTTGGGAGACCAGATACCCAAATTCGCCGTTGCCAC...TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGCCAAAGCGAGAGCATaGGCAGTGAATTGCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: LLNFASVQGISYCILESQAKARA*AVNCRH Trigger: GTGTCTGCAATTCACTGCCAATGCTCTCGCTTTGGC...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270586.8 |
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| CDS-3UTR CAA 90 bp | TTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGGATAGCATTGGCAGTGAATaGCAGACACTCTTCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LNFASVQGISYCILESQDSIGSE*QTLFLG Trigger: ACCAAGGAAGAGTGTCTGCAATTCACTGCCAATGCT...ATCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGAGCATTGGCAGTGAATaGCAGACACTCTTCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LLNFASVQGISYCILESQSIGSE*QTLFLG Trigger: ACCAAGGAAGAGTGTCTGCAATTCACTGCCAATGCT...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAATTTTGCATCAGTACAGGGCATCTCTTATTGCATACTAGAATCCCAGACAGGGCATCTCTTATaGCATACTAGAATCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: LLNFASVQGISYCILESQTGHLL*HTRIPG Trigger: TCCTGGGATTCTAGTATGCAATAAGAGATGCCCTGT...CTGGGATTCTAGTATGCAATAAGAGATGCCCTGTACTGATGCAAAATTTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS TCA 72 bp | TCCCAGTGGAAACTTCTCGGCTTTCCCAGTCTGGAGTaGACGCCTCCGGCCCCCAAGCCGGTGCTGGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: SQWKLLGFPSLE*TPPAPKPVLAR Trigger: CCGGGCCAGCACCGGCTTGGGGGCCGGAGGCGTTCACTCCAGACTGGGAAAGCCGAGAAGTTTCCACTGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000270586.8 ENST00000571309.1 ENST00000575079.1 ENST00000614486.4 |
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| CDS TCA 72 bp | GTCCTGGCTCAAGTGTGCTCTGGTCGGGTGGGGATCTaGCCTGCCCTCCTTCTTGAGGGTCCCAGCCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: VLAQVCSGRVGI*PALLLEGPSLR Trigger: TCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTCAGATCCCCACCCGACCAGAGCACACTTGAGCCAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575643.1 |
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| CDS CCA 72 bp | AGTGGTCCCAGTGGAAACTTCTCGGCTTTCCCAGTCTaGAGTGAACGCCTCCGGCCCCCAAGCCGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SGPSGNFSAFPV*SERLRPPSRCW Trigger: CCAGCACCGGCTTGGGGGCCGGAGGCGTTCACTCCAGACTGGGAAAGCCGAGAAGTTTCCACTGGGACCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000270586.8 ENST00000571309.1 ENST00000575079.1 ENST00000614486.4 |
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| CDS TCA 72 bp | CTCTGGTCGGGTGGGGATCTGACCTGCCCTCCTTCTTaGGGGTCCCAGCCTGCGATGATGATTCCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: LWSGGDLTCPPS*GSQPAMMIPAI Trigger: GATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTCAGATCCCCACCCGACCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575643.1 |
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| CDS CAA 72 bp | GCTCTGGTCGGGTGGGGATCTGACCTGCCCTCCTTCTaGAGGGTCCCAGCCTGCGATGATGATTCCCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: ALVGWGSDLPSF*RVPACDDDSRH Trigger: ATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTCAGATCCCCACCCGACCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575643.1 |
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| CDS CAA 90 bp | CTCAAGTGTGCTCTGGTCGGGTGGGGATCTGACCTGCCCTCCTTCTaGAGGGTCCCAGCCTGCGATGATGATTCCCGCCATCAGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LKCALVGWGSDLPSF*RVPACDDDSRHQVF Trigger: GAAGACCTGATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTCAGATCCCCACCCGACCAGAGCACACTTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575643.1 |
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| CDS GCA 72 bp | GGATCTGACCTGCCCTCCTTCTTGAGGGTCCCAGCCTaGGATGATGATTCCCGCCATCAGGTCTTCCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: GSDLPSFLRVPA*DDDSRHQVFPV Trigger: TACCGGGAAGACCTGATGGCGGGAATCATCATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTCAGATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575643.1 |
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| CDS CCA 72 bp | TCACTCGATTGGCGATGTAGGACCCAGTGGTTGTTCTaGAGTCCGCCCCCAGAACCACGCCCCCGTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: SLDWRCRTQWLF*SPPPEPRPRQT Trigger: AGTTTGACGGGGGCGTGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGTCCTACATCGCCAATCGAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000270586.8 ENST00000571309.1 ENST00000614486.4 |
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| CDS CAA 72 bp | GACCTTTCACAAATCTGTCCTGAGCTCACCCAGTGGTaGTTCTGGAGTCCGCCCCCAGAACCACGCCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: DLSQICPELTQW*FWSPPPEPRPR Trigger: ACGGGGGCGTGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGTGAGCTCAGGACAGATTTGTGAAAGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000575079.1 |
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| CDS CCA 72 bp | CCAAAAGTACTTGCCGCTCTACCCCTGACTCTGCAATaGCTGCCAGGCGGATCACTCCTCCACTGGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PKVLAALPLTLQ*LPGGSLLHWSH Trigger: ATGGCTCCAGTGGAGGAGTGATCCGCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000270586.8 ENST00000575643.1 ENST00000614486.4 |
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| CDS CCA 72 bp | TCACAAATCTGTCCTGAGCTCACCCAGTGGTTGTTCTaGAGTCCGCCCCCAGAACCACGCCCCCGTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: SQICPELTQWLF*SPPPEPRPRQT Trigger: AGTTTGACGGGGGCGTGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGTGAGCTCAGGACAGATTTGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000575079.1 |
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| CDS CCA 72 bp | GAAGACCTTTCACAAATCTGTCCTGAGCTCACCCAGTaGTTGTTCTGGAGTCCGCCCCCAGAACCACGCCCC | + |
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Preference number: 6 (lower is better) Translates to: EDLSQICPELTQ*LFWSPPPEPRP Trigger: GGGGCGTGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGTGAGCTCAGGACAGATTTGTGAAAGGTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575079.1 |
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| CDS CAA 90 bp | AGATGGGAAGACCTTTCACAAATCTGTCCTGAGCTCACCCAGTGGTaGTTCTGGAGTCCGCCCCCAGAACCACGCCCCCGTCAAACTGCA | + |
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Preference number: 6 (lower is better) Translates to: RWEDLSQICPELTQW*FWSPPPEPRPRQTA Trigger: TGCAGTTTGACGGGGGCGTGGTTCTGGGGGCGGACTCCAGAACAACCACTGGGTGAGCTCAGGACAGATTTGTGAAAGGTCTTCCCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000575079.1 |
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| CDS TCA 72 bp | TATCTGGTCTCCCAAAAGTACTTGCCGCTCTACCCCTaGCTCTGCAATGGCTGCCAGGCGGATCACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: YLVSQKYLPLYP*LCNGCQADHSS Trigger: GGAGGAGTGATCCGCCTGGCAGCCATTGCAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000270586.8 ENST00000575643.1 ENST00000614486.4 |
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| CDS TCA 72 bp | AAAAGGAAGATGGGAAGACCTTTCACAAATCTGTCCTaGGCTCACCCAGTGGTTGTTCTGGAGTCCGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: KRKMGRPFTNLS*AHPVVVLESAP Trigger: GGGGGCGGACTCCAGAACAACCACTGGGTGAGCTCAGGACAGATTTGTGAAAGGTCTTCCCATCTTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575079.1 |
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| CDS CCA 72 bp | CATCTCCTTAAAGAGGCTGGCTGCTGTGTGGACCAGTaGAGGCTCATTCAGTTCAATGCTGTGGAAACCGAG | + |
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Preference number: 6 (lower is better) Translates to: HLLKEAGCCVDQ*RLIQFNAVETE Trigger: CTCGGTTTCCACAGCATTGAACTGAATGAGCCTCCACTGGTCCACACAGCAGCCAGCCTCTTTAAGGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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| CDS GCA 72 bp | CCGGTATCGGTAACACATCTCCTTAAAGAGGCTGGCTaGTGTGTGGACCAGTGGAGGCTCATTCAGTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: PVSVTHLLKEAG*CVDQWRLIQFN Trigger: ATTGAACTGAATGAGCCTCCACTGGTCCACACAGCAGCCAGCCTCTTTAAGGAGATGTGTTACCGATACCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000270586.8 ENST00000614486.4 |
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