Pregenerated sensors for PSMB4 (Homo sapiens)
Ensembl gene IDs: ENSG00000159377Ensembl transcript IDs: ENST00000290541.7, ENST00000466425.1, ENST00000474100.1, ENST00000476467.1, ENST00000493673.1, ENST00000495288.5, ENST00000495805.5
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATCTTAACGCCGAGGACTaGGGTCCCGGTCACCATGGG | + |
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Preference number: 4 (lower is better) Translates to: IFELAKFKVKSRATSVLDLNAED*GPGHHG Trigger: CCCATGGTGACCGGGACCTCAGTCCTCGGCGTTAAG...ATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR GCA 90 bp | CTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGGATCCCAGCATGTCTaGGGCAATCACCACTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LAKFKVKSRATSVLDNASGSQHV*GNHHSA Trigger: GGCGGAGTGGTGATTGCCGCAGACATGCTGGGATCC...AGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CCA 90 bp | GAAGAGTCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCATCGCGGGCCTCGGTCTaGCTTAGCACTGGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EESIFELAKFKVKSRATSSRASV*LSTGCF Trigger: GAAGCAGCCAGTGCTAAGCCAGACCGAGGCCCGCGA...TGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGACTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR TCA 90 bp | ATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATCAGACGCCGGATCCATaGAGGAATCGGGAGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: IFELAKFKVKSRATSVLDQTPDP*RNREWT Trigger: CGTCCACTCCCGATTCCTTCATGGATCCGGCGTCTG...ATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR TCA 90 bp | GCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTAGGTTCTGGGTCCGCGTaGTTGGACCTCTGTAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: AKFKVKSRATSVLDNASVGSGSA*LDLCKV Trigger: CACTTTACAGAGGTCCAATCACGCGGACCCAGAACC...TACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR GCA 90 bp | ATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATCGGGAGTGGACGGAATaGGGTAAAACTGTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: IFELAKFKVKSRATSVLDREWTE*GKTVLG Trigger: CCCCAGGACAGTTTTACCGCATTCCGTCCACTCCCG...ATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTATGTCACCATGGGGTTCTaGGTCCGCGTGATTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: PSSKLKVGQLQFWIMHLYVTMGF*VRVIGP Trigger: AGGTCCAATCACGCGGACCCAGAACCCCATGGTGAC...ATACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CCA 90 bp | GAGTCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTAGCGCCGGCTGTACATaGCCCTGGTCAGCCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: ESIFELAKFKVKSRATSVSAGCT*PWSAMN Trigger: ATTCATGGCTGACCAGGGCCATGTACAGCCGGCGCT...AACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR TCA 90 bp | GCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTAGGCCCTGGTCAGCCATaGATGAATAGCTCTAGGACT | + |
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Preference number: 4 (lower is better) Translates to: AKFKVKSRATSVLDNASVGPGQP*MNSSRT Trigger: AGTCCTAGAGCTATTCATTCATGGCTGACCAGGGCC...TACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTATGGCTTAGCACTGGCTaGTTCTCCAGAACTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: AKFKVKSRATSVLDNASVWLSTG*FSRTSR Trigger: GCGAGAAGTTCTGGAGAAGCAGCCAGTGCTAAGCCA...TACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR TCA 90 bp | ATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATCAGCATAGCCTCCGATaGCCATGGTGTTCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: IFELAKFKVKSRATSVLDQHSLR*PWCSTK Trigger: CTTTGTGGAACACCATGGTCATCGGAGGCTATGCTG...ATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR GCA 90 bp | TCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGAGGCTGAGCCAAGTATaGACCATAACCAGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SIFELAKFKVKSRATSVLRLSQV*TITSGQ Trigger: CTGGCCACTGGTTATGGTGCATACTTGGCTCAGCCT...CAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTAAGTACAGCACTCGCATaGAGCGTTCTACTAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: AKFKVKSRATSVLDNASVSTALA*SVLLSR Trigger: GCGACTTAGTAGAACGCTGCATGCGAGTGCTGTACT...TACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CCA 90 bp | GAGTCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGGTCCGCGTGATTaGACCTCTGTAAAGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ESIFELAKFKVKSRATSVLGPRD*TSVKCR Trigger: TCTGCACTTTACAGAGGTCCAATCACGCGGACCCAG...AACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR GCA 90 bp | GAGTCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTTGGACCTCTGTAAAGTaGAGACGCCGGATCCATGAA | + |
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Preference number: 4 (lower is better) Translates to: ESIFELAKFKVKSRATSVWTSVK*RRRIHE Trigger: TTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCA...AACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CCA 90 bp | GCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTAAAGCCACTGATCATGTaGGCAATATCCCAGTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: AKFKVKSRATSVLDNASVKPLIM*AISQLV Trigger: GACCAACTGGGATATTGCCCACATGATCAGTGGCTT...TACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR TCA 90 bp | TCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGCAACACCTTTTTCGGTaGCAGTGGCGATTTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: SIFELAKFKVKSRATSVLQHLFR*QWRFET Trigger: GGTTTCAAATCGCCACTGTCACCGAAAAAGGTGTTG...CAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CCA 90 bp | GAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCATCAATCACCATCTaGCCGAGAACTTGCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: ELAKFKVKSRATSVLDNASSITI*PRTCFK Trigger: TTTGAAGCAAGTTCTCGGCCAGATGGTGATTGATGA...TGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CCA 90 bp | GAAGAGTCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGGTCTCTGTAGACAATaGTCCCTCTATTTCAACACC | + |
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Preference number: 4 (lower is better) Translates to: EESIFELAKFKVKSRATSGLCRQ*SLYFNT Trigger: GGTGTTGAAATAGAGGGACCATTGTCTACAGAGACC...TGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGACTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CCA 90 bp | GCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTAGGGCAACTTCAGTTCTaGATAATGCATCTGTATTTC | + |
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Preference number: 4 (lower is better) Translates to: AKFKVKSRATSVLDNASVGQLQF*IMHLYF Trigger: GAAATACAGATGCATTATCCAGAACTGAAGTTGCCC...TACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR GCA 90 bp | CCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTATATCTGGCCGAGAACTTaGTTCAAATACTGGAAATCA | + |
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Preference number: 4 (lower is better) Translates to: PSSKLKVGQLQFWIMHLYIWPRT*FKYWKS Trigger: TGATTTCCAGTATTTGAAGCAAGTTCTCGGCCAGAT...ATACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR TCA 90 bp | CCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTATAGAAGAGTCTATCTTTaGACTAGCCAAGTTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PSSKLKVGQLQFWIMHLYRRVYL*TSQVQS Trigger: ACTTTGAACTTGGCTAGTTCAAAGATAGACTCTTCT...ATACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS TCA 90 bp | GTCTGCGGCAATCACCACTCCGCCCTCGAACTTAACGCCGAGGACTaGGGTCCCGGTCACCATGGGGTTCTGGGTCCGCGTGATTGGACC | + |
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Preference number: 5 (lower is better) Translates to: VCGNHHSALELNAED*GPGHHGVLGPRDWT Trigger: GGTCCAATCACGCGGACCCAGAACCCCATGGTGACCGGGACCTCAGTCCTCGGCGTTAAGTTCGAGGGCGGAGTGGTGATTGCCGCAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS GCA 90 bp | GGTCACCATGGGGTTCTGGGTCCGCGTGATTGGACCTCTGTAAAGTaGAGACGCCGGATCCATGAAGGAATCGGGAGTGGACGGAATGCG | + |
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Preference number: 5 (lower is better) Translates to: GHHGVLGPRDWTSVK*RRRIHEGIGSGRNA Trigger: CGCATTCCGTCCACTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCAGAACCCCATGGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS CCA 90 bp | TACAGCACTCGCATGCAGCGTTCTACTAAGTCGCGGGCCTCGGTCTaGCTTAGCACTGGCTGCTTCTCCAGAACTTCTCGCAGCAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: YSTRMQRSTKSRASV*LSTGCFSRTSRSRG Trigger: GCCTCTGCTGCGAGAAGTTCTGGAGAAGCAGCCAGTGCTAAGCCAGACCGAGGCCCGCGACTTAGTAGAACGCTGCATGCGAGTGCTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000466425.1 ENST00000474100.1 ENST00000476467.1 ENST00000493673.1 |
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| CDS GCA 90 bp | TCACCCGGTTGTAAGAACGGGCATCTCGGTAGTACAGCACTCGCATaGAGCGTTCTACTAAGTCGCGGGCCTCGGTCTGGCTTAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: SPGCKNGHLGSTALA*SVLLSRGPRSGLAL Trigger: CAGTGCTAAGCCAGACCGAGGCCCGCGACTTAGTAGAACGCTGCATGCGAGTGCTGTACTACCGAGATGCCCGTTCTTACAACCGGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474100.1 ENST00000476467.1 |
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| CDS GCA 90 bp | GAAACCGGTTGTAAGAACGGGCATCTCGGTAGTACAGCACTCGCATaGAGCGTTCTACTAAGTCGCGGGCCTCGGTCTGGCTTAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: ETGCKNGHLGSTALA*SVLLSRGPRSGLAL Trigger: CAGTGCTAAGCCAGACCGAGGCCCGCGACTTAGTAGAACGCTGCATGCGAGTGCTGTACTACCGAGATGCCCGTTCTTACAACCGGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000290541.7 ENST00000466425.1 ENST00000493673.1 |
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| CDS TCA 90 bp | TGTCCACATAACCGAGGAAGCTCTCTCCATCAGCATAGCCTCCGATaGCCATGGTGTTCCACAAAGGGTTCATCTTCGAGCGCCGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: CPHNRGSSLHQHSLR*PWCSTKGSSSSAGC Trigger: ACAGCCGGCGCTCGAAGATGAACCCTTTGTGGAACACCATGGTCATCGGAGGCTATGCTGATGGAGAGAGCTTCCTCGGTTATGTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000290541.7 ENST00000474100.1 ENST00000495805.5 |
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| CDS CCA 90 bp | GAACTTCTCGCAGCAGAGGCTGAGCCAAGTATGCACCATAACCAGTaGCCAGCGAAGGGGCTTCATAGGCTACACCAAGCATGTCCACAT | + |
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Preference number: 5 (lower is better) Translates to: ELLAAEAEPSMHHNQ*PAKGLHRLHQACPH Trigger: ATGTGGACATGCTTGGTGTAGCCTATGAAGCCCCTTCGCTGGCCACTGGTTATGGTGCATACTTGGCTCAGCCTCTGCTGCGAGAAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290541.7 ENST00000474100.1 |
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| CDS TCA 90 bp | AGGGTTCATCTTCGAGCGCCGGCTGTACATGGCCCTGGTCAGCCATaGATGAATAGCTCTAGGACTATAGCTGTGTCCATCTCCCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RVHLRAPAVHGPGQP*MNSSRTIAVSISQK Trigger: CTTCTGGGAGATGGACACAGCTATAGTCCTAGAGCTATTCATTCATGGCTGACCAGGGCCATGTACAGCCGGCGCTCGAAGATGAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000290541.7 ENST00000474100.1 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS GCA 90 bp | TCCCTTTCCCCCACCTCTAGACTTACTACTTACCTGAGCCAAGTATaGACCATAACCAGTGGCCAGCGAAGGGGCTTCATAGGCTACACC | + |
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Preference number: 5 (lower is better) Translates to: SLSPTSRLTTYLSQV*TITSGQRRGFIGYT Trigger: GGTGTAGCCTATGAAGCCCCTTCGCTGGCCACTGGTTATGGTGCATACTTGGCTCAGGTAAGTAGTAAGTCTAGAGGTGGGGGAAAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS GCA 90 bp | ATCAGTGTCAACACCTACAGCCCCCAGACTACAAAGAAAACCATCTaGCCAGTAATAGCGATCCCAGCCCATCCCTCATATCAGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: ISVNTYSPQTTKKTI*PVIAIPAHPSYQNF Trigger: GAAATTCTGATATGAGGGATGGGCTGGGATCGCTATTACTGGGCAGATGGTTTTCTTTGTAGTCTGGGGGCTGTAGGTGTTGACACTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000466425.1 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS CCA 90 bp | GCCACTGATCATGTGGGCAATATCCCAGTTGGTCTCTGTAGACAATaGTCCCTCTATTTCAACACCTTTTTCGGTGACAGTGGCGATTTG | + |
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Preference number: 5 (lower is better) Translates to: ATDHVGNIPVGLCRQ*SLYFNTFFGDSGDL Trigger: CAAATCGCCACTGTCACCGAAAAAGGTGTTGAAATAGAGGGACCATTGTCTACAGAGACCAACTGGGATATTGCCCACATGATCAGTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000290541.7 ENST00000466425.1 ENST00000474100.1 |
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| CDS GCA 90 bp | AAGCTAAGAGCCACTTCAGGAAGAAGTTCTAGGGTGTCCTCTCTTTaGATGTCTACTGACTCCCAGTCATGTCATCTTGTCACTGGAATC | + |
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Preference number: 5 (lower is better) Translates to: KLRATSGRSSRVSSL*MSTDSQSCHLVTGI Trigger: GATTCCAGTGACAAGATGACATGACTGGGAGTCAGTAGACATGCAAAGAGAGGACACCCTAGAACTTCTTCCTGAAGTGGCTCTTAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000466425.1 ENST00000476467.1 ENST00000493673.1 |
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| CDS CCA 90 bp | TCACCTGATCATGTGGGCAATATCCCAGTTGGTCTCTGTAGACAATaGTCCCTCTATTTCAACACCTTTTTCGGTGACAGTGGCGATTTG | + |
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Preference number: 5 (lower is better) Translates to: SPDHVGNIPVGLCRQ*SLYFNTFFGDSGDL Trigger: CAAATCGCCACTGTCACCGAAAAAGGTGTTGAAATAGAGGGACCATTGTCTACAGAGACCAACTGGGATATTGCCCACATGATCAGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000476467.1 ENST00000493673.1 |
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| CDS-3UTR CAA 90 bp | GCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTAGGTGACAGTGGCGATTaGAAACCGGTTGTAAGAACG | + |
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Preference number: 5 (lower is better) Translates to: AKFKVKSRATSVLDNASVGDSGD*KPVVRT Trigger: CGTTCTTACAACCGGTTTCAAATCGCCACTGTCACC...TACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CAA 90 bp | GAGTCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTATAATGCGAGAGATGTaGCGGAAACGAGCCAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: ESIFELAKFKVKSRATSVIMREM*RKRAKE Trigger: CTCCTTGGCTCGTTTCCGCAACATCTCTCGCATTAT...AACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CAA 90 bp | GCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATAATGCATCTGTAAGCATGGTACTGTTGTaGACTCGCATAATGCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: AKFKVKSRATSVLDNASVSMVLL*TRIMRE Trigger: CTCTCGCATTATGCGAGTCAACAACAGTACCATGCT...TACAGATGCATTATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CAA 90 bp | ATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCAGTTCTGGATCCCAGCATGGTACTGTaGTTGACTCGCATAATGCGA | + |
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Preference number: 5 (lower is better) Translates to: IFELAKFKVKSRATSVLDPSMVL*LTRIMR Trigger: TCGCATTATGCGAGTCAACAACAGTACCATGCTGGG...ATCCAGAACTGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS-3UTR CAA 90 bp | GAAGAGTCTATCTTTGAACTAGCCAAGTTCAAAGTTAAAAGTAGGGCAACTTCATGGGCAATATCCCAGTaGGTCTCTGTAGACAATGGT | + |
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Preference number: 5 (lower is better) Translates to: EESIFELAKFKVKSRATSWAISQ*VSVDNG Trigger: ACCATTGTCTACAGAGACCAACTGGGATATTGCCCA...TGAAGTTGCCCTACTTTTAACTTTGAACTTGGCTAGTTCAAAGATAGACTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290541.7 |
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| CDS CCA 90 bp | CACTTGGGGAGAAGAGACAGAAGAGATACTACACAGGTACTAGGTTaGGTGGTAAAGGAAATAAGTTATTTGTATTCATATGAACCTCTC | + |
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Preference number: 5 (lower is better) Translates to: HLGRRDRRDTTQVLG*VVKEISYLYSYEPL Trigger: GAGAGGTTCATATGAATACAAATAACTTATTTCCTTTACCACCCAACCTAGTACCTGTGTAGTATCTCTTCTGTCTCTTCTCCCCAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 |
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| CDS TCA 72 bp | AATCACCACTCCGCCCTCGAACTTAACGCCGAGGACTaGGGTCCCGGTCACCATGGGGTTCTGGGTCCGCGT | + |
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Preference number: 6 (lower is better) Translates to: NHHSALELNAED*GPGHHGVLGPR Trigger: ACGCGGACCCAGAACCCCATGGTGACCGGGACCTCAGTCCTCGGCGTTAAGTTCGAGGGCGGAGTGGTGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS GCA 72 bp | GAAACGAGCCAAGGAGCCGTAGGATCCCAGCATGTCTaGGGCAATCACCACTCCGCCCTCGAACTTAACGCC | + |
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Preference number: 6 (lower is better) Translates to: ETSQGAVGSQHV*GNHHSALELNA Trigger: GGCGTTAAGTTCGAGGGCGGAGTGGTGATTGCCGCAGACATGCTGGGATCCTACGGCTCCTTGGCTCGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS CCA 72 bp | GGTCCCGGTCACCATGGGGTTCTGGGTCCGCGTGATTaGACCTCTGTAAAGTGCAGACGCCGGATCCATGAA | + |
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Preference number: 6 (lower is better) Translates to: GPGHHGVLGPRD*TSVKCRRRIHE Trigger: TTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCAGAACCCCATGGTGACCGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS CCA 72 bp | CGCATGCAGCGTTCTACTAAGTCGCGGGCCTCGGTCTaGCTTAGCACTGGCTGCTTCTCCAGAACTTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RMQRSTKSRASV*LSTGCFSRTSR Trigger: GCGAGAAGTTCTGGAGAAGCAGCCAGTGCTAAGCCAGACCGAGGCCCGCGACTTAGTAGAACGCTGCATGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000466425.1 ENST00000474100.1 ENST00000476467.1 ENST00000493673.1 |
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| CDS GCA 72 bp | GGGGTTCTGGGTCCGCGTGATTGGACCTCTGTAAAGTaGAGACGCCGGATCCATGAAGGAATCGGGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GVLGPRDWTSVK*RRRIHEGIGSG Trigger: TCCACTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCAGAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS GCA 72 bp | TGTAAGAACGGGCATCTCGGTAGTACAGCACTCGCATaGAGCGTTCTACTAAGTCGCGGGCCTCGGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CKNGHLGSTALA*SVLLSRGPRSG Trigger: GCCAGACCGAGGCCCGCGACTTAGTAGAACGCTGCATGCGAGTGCTGTACTACCGAGATGCCCGTTCTTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000466425.1 ENST00000474100.1 ENST00000476467.1 ENST00000493673.1 |
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| CDS CCA 72 bp | GCAGCAGAGGCTGAGCCAAGTATGCACCATAACCAGTaGCCAGCGAAGGGGCTTCATAGGCTACACCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: AAEAEPSMHHNQ*PAKGLHRLHQA Trigger: TGCTTGGTGTAGCCTATGAAGCCCCTTCGCTGGCCACTGGTTATGGTGCATACTTGGCTCAGCCTCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290541.7 ENST00000474100.1 |
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| CDS TCA 72 bp | CTTCGAGCGCCGGCTGTACATGGCCCTGGTCAGCCATaGATGAATAGCTCTAGGACTATAGCTGTGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: LRAPAVHGPGQP*MNSSRTIAVSI Trigger: GATGGACACAGCTATAGTCCTAGAGCTATTCATTCATGGCTGACCAGGGCCATGTACAGCCGGCGCTCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000290541.7 ENST00000474100.1 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS TCA 72 bp | AACCGAGGAAGCTCTCTCCATCAGCATAGCCTCCGATaGCCATGGTGTTCCACAAAGGGTTCATCTTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: NRGSSLHQHSLR*PWCSTKGSSSS Trigger: GCTCGAAGATGAACCCTTTGTGGAACACCATGGTCATCGGAGGCTATGCTGATGGAGAGAGCTTCCTCGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000290541.7 ENST00000474100.1 ENST00000495805.5 |
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| CDS CCA 72 bp | CTCCCCTCTCTACTTGGGAACCACTCTCCTGTTCTCTaGATGACTTACACCATCTGGCCGAGAACTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LPSLLGNHSPVL*MTYTIWPRTCF Trigger: GAAGCAAGTTCTCGGCCAGATGGTGTAAGTCATCCAGAGAACAGGAGAGTGGTTCCCAAGTAGAGAGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476467.1 |
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| CDS GCA 72 bp | CCCACCTCTAGACTTACTACTTACCTGAGCCAAGTATaGACCATAACCAGTGGCCAGCGAAGGGGCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: PTSRLTTYLSQV*TITSGQRRGFI Trigger: TATGAAGCCCCTTCGCTGGCCACTGGTTATGGTGCATACTTGGCTCAGGTAAGTAGTAAGTCTAGAGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS CCA 72 bp | TACTACTTACCTGAGCCAAGTATGCACCATAACCAGTaGCCAGCGAAGGGGCTTCATAGGCTACACCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: YYLPEPSMHHNQ*PAKGLHRLHQA Trigger: TGCTTGGTGTAGCCTATGAAGCCCCTTCGCTGGCCACTGGTTATGGTGCATACTTGGCTCAGGTAAGTAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS CAA 90 bp | GGGTGTCCTCTCTTTGCATGTCTACTGACTCCCAGTCATGTCATCTaGTCACTGGAATCAGTGTCAACACCTACAGCCCCCAGACTACAA | + |
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Preference number: 6 (lower is better) Translates to: GCPLFACLLTPSHVI*SLESVSTPTAPRLQ Trigger: TTGTAGTCTGGGGGCTGTAGGTGTTGACACTGATTCCAGTGACAAGATGACATGACTGGGAGTCAGTAGACATGCAAAGAGAGGACACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000466425.1 ENST00000476467.1 ENST00000493673.1 ENST00000495805.5 |
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| CDS CAA 90 bp | ACACAAGTAAGGCAATCTGTTCTTCAAAGCATAGAGACCCAGGGATaGCAAGTAGCCAGAGCCCGCCAATTAGGTTCCCAGCACATCCCT | + |
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Preference number: 6 (lower is better) Translates to: TQVRQSVLQSIETQG*QVARARQLGSQHIP Trigger: AGGGATGTGCTGGGAACCTAATTGGCGGGCTCTGGCTACTTGCAATCCCTGGGTCTCTATGCTTTGAAGAACAGATTGCCTTACTTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474100.1 ENST00000476467.1 |
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| CDS GCA 72 bp | AACACCTACAGCCCCCAGACTACAAAGAAAACCATCTaGCCAGTAATAGCGATCCCAGCCCATCCCTCATAT | + |
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Preference number: 6 (lower is better) Translates to: NTYSPQTTKKTI*PVIAIPAHPSY Trigger: ATATGAGGGATGGGCTGGGATCGCTATTACTGGGCAGATGGTTTTCTTTGTAGTCTGGGGGCTGTAGGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000466425.1 ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 ENST00000495805.5 |
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| CDS CAA 72 bp | CTCTTTGCATGTCTACTGACTCCCAGTCATGTCATCTaGTCACTGGAATCAGTGTCAACACCTACAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: LFACLLTPSHVI*SLESVSTPTAP Trigger: GGGGGCTGTAGGTGTTGACACTGATTCCAGTGACAAGATGACATGACTGGGAGTCAGTAGACATGCAAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000466425.1 ENST00000476467.1 ENST00000493673.1 ENST00000495805.5 |
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| CDS TCA 72 bp | CCTCTCTACTTGGGAACCACTCTCCTGTTCTCTGGATaGCTTACACCATCTGGCCGAGAACTTGCTTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: PLYLGTTLLFSG*LTPSGRELASN Trigger: ATTTGAAGCAAGTTCTCGGCCAGATGGTGTAAGTCATCCAGAGAACAGGAGAGTGGTTCCCAAGTAGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476467.1 |
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| CDS GCA 72 bp | GCCACTTCAGGAAGAAGTTCTAGGGTGTCCTCTCTTTaGATGTCTACTGACTCCCAGTCATGTCATCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: ATSGRSSRVSSL*MSTDSQSCHLV Trigger: GACAAGATGACATGACTGGGAGTCAGTAGACATGCAAAGAGAGGACACCCTAGAACTTCTTCCTGAAGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000466425.1 ENST00000476467.1 ENST00000493673.1 |
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| CDS CCA 72 bp | AACCACTCTCCTGTTCTCTGGATGACTTACACCATCTaGCCGAGAACTTGCTTCAAATACTGGAAATCAGCG | + |
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Preference number: 6 (lower is better) Translates to: NHSPVLWMTYTI*PRTCFKYWKSA Trigger: CGCTGATTTCCAGTATTTGAAGCAAGTTCTCGGCCAGATGGTGTAAGTCATCCAGAGAACAGGAGAGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476467.1 |
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| CDS CCA 72 bp | CATGTGGGCAATATCCCAGTTGGTCTCTGTAGACAATaGTCCCTCTATTTCAACACCTTTTTCGGTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: HVGNIPVGLCRQ*SLYFNTFFGDS Trigger: ACTGTCACCGAAAAAGGTGTTGAAATAGAGGGACCATTGTCTACAGAGACCAACTGGGATATTGCCCACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000290541.7 ENST00000466425.1 ENST00000474100.1 ENST00000476467.1 ENST00000493673.1 |
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| CDS CAA 90 bp | CAATGGTCCCTCTATTTCAACACCTTTTTCGGTGACAGTGGCGATTaGAAACTGGAAGAAAGCAGAGCATTCAATAATGCCCACGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: QWSLYFNTFFGDSGD*KLEESRAFNNAHAL Trigger: TAAGGCGTGGGCATTATTGAATGCTCTGCTTTCTTCCAGTTTCAAATCGCCACTGTCACCGAAAAAGGTGTTGAAATAGAGGGACCATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000474100.1 ENST00000476467.1 |
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| CDS CAA 72 bp | CCTATTACTCACCTGATCATGTGGGCAATATCCCAGTaGGTCTCTGTAGACAATGGTCCCTCTATTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: PITHLIMWAISQ*VSVDNGPSIST Trigger: TGTTGAAATAGAGGGACCATTGTCTACAGAGACCAACTGGGATATTGCCCACATGATCAGGTGAGTAATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476467.1 ENST00000493673.1 |
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| CDS CAA 90 bp | TCTGTATTTCATTCAAAGCCACTGATCATGTGGGCAATATCCCAGTaGGTCTCTGTAGACAATGGTCCCTCTATTTCAACACCTTTTTCG | + |
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Preference number: 6 (lower is better) Translates to: SVFHSKPLIMWAISQ*VSVDNGPSISTPFS Trigger: CGAAAAAGGTGTTGAAATAGAGGGACCATTGTCTACAGAGACCAACTGGGATATTGCCCACATGATCAGTGGCTTTGAATGAAATACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000290541.7 ENST00000466425.1 ENST00000474100.1 |
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| CDS CAA 90 bp | GATACTACACAGGTACTAGGTTGGGTGGTAAAGGAAATAAGTTATTaGTATTCATATGAACCTCTCTCCATCAGCATAGCCTCCGATGAC | + |
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Preference number: 6 (lower is better) Translates to: DTTQVLGWVVKEISY*YSYEPLSISIASDD Trigger: GTCATCGGAGGCTATGCTGATGGAGAGAGGTTCATATGAATACAAATAACTTATTTCCTTTACCACCCAACCTAGTACCTGTGTAGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 |
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| CDS CCA 72 bp | AGAAGAGACAGAAGAGATACTACACAGGTACTAGGTTaGGTGGTAAAGGAAATAAGTTATTTGTATTCATAT | + |
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Preference number: 6 (lower is better) Translates to: RRDRRDTTQVLG*VVKEISYLYSY Trigger: ATATGAATACAAATAACTTATTTCCTTTACCACCCAACCTAGTACCTGTGTAGTATCTCTTCTGTCTCTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000476467.1 ENST00000493673.1 ENST00000495288.5 |
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