RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSMB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000126067

Ensembl transcript IDs: ENST00000373237.4, ENST00000621781.4, ENST00000630477.1

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACTGAGAGTCAGGATGGGTTTGCAGGCTTGCCTGAGATTGCCCTaGGGACACTTACATTCAAAGGCAGAGAACCGTATGTCATCCCTG +
Preference number: 1 (lower is better)
Translates to: TLRVRMGLQACLRLP*GHLHSKAENRMSSL
Trigger: CAGGGATGACATACGGTTCTCTGCCTTTGAATGTAAGTGTCCCCAGGGCAATCTCAGGCAAGCCTGCAAACCCATCCTGACTCTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR GCA 90 bp GGAGGGAAAGGAAGTGGGGAGTTAGGTTCGGAGAGGATTATGGAATaGCTAGCATGTCAAATCAAAGAATTGGGCTTTATTCTCTTAAGC +
Preference number: 1 (lower is better)
Translates to: GGKGSGELGSERIME*LACQIKELGFILLS
Trigger: GCTTAAGAGAATAAAGCCCAATTCTTTGATTTGACATGCTAGGCATTCCATAATCCTCTCCGAACCTAACTCCCCACTTCCTTTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR GCA 90 bp CATTCAAAGGCAGAGAACCGTATGTCATCCCTGGTGAGGCCTGAATaGAGAATAACAAGTTTACCAATCATTATACACTTACTGAGCACT +
Preference number: 1 (lower is better)
Translates to: HSKAENRMSSLVRPE*RITSLPIIIHLLST
Trigger: AGTGCTCAGTAAGTGTATAATGATTGGTAAACTTGTTATTCTGCATTCAGGCCTCACCAGGGATGACATACGGTTCTCTGCCTTTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR TCA 90 bp CTTACATTCAAAGGCAGAGAACCGTATGTCATCCCTGGTGAGGCCTaGATGCAGAATAACAAGTTTACCAATCATTATACACTTACTGAG +
Preference number: 1 (lower is better)
Translates to: LTFKGREPYVIPGEA*MQNNKFTNHYTLTE
Trigger: CTCAGTAAGTGTATAATGATTGGTAAACTTGTTATTCTGCATTCAGGCCTCACCAGGGATGACATACGGTTCTCTGCCTTTGAATGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR GCA 90 bp AATAGATGCCTTACACTCAGGAATCTAGCTAAAAGCTCAAACCTATaGATATTCATGGTGGTGTTGGAGGTTGAATCAACTGTAGTGACG +
Preference number: 1 (lower is better)
Translates to: NRCLTLRNLAKSSNL*IFMVVLEVESTVVT
Trigger: CGTCACTACAGTTGATTCAACCTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAGTGTAAGGCATCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR CCA 90 bp GAAATGCCAGAACTTGGTGGCCATGTAGAGACAGGAGATAAAGAATaGCATAAAAATGATGCCCAGCTAAATGCAATGTTGTATCTTGGA +
Preference number: 1 (lower is better)
Translates to: EMPELGGHVETGDKE*HKNDAQLNAMLYLG
Trigger: TCCAAGATACAACATTGCATTTAGCTGGGCATCATTTTTATGCCATTCTTTATCTCCTGTCTCTACATGGCCACCAAGTTCTGGCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR GCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGCCGGGAGGCGGAGGTTaGAGTGAGCCAAGATTACGC +
Preference number: 2 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEPGGGG*SEPRLR
Trigger: GCGTAATCTTGGCTCACTGCAACCTCCGCCTCCCGG...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGCTCTCTTGACCTCGTaGTCCGCCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEALLTS*SARLGL
Trigger: GAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGAGC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGCTCTCTTGACCTCGTaGTCCGCCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: TELDKVGFILVGDQMVLIALLTS*SARLGL
Trigger: GAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGAGC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGCTGCTAAAGGGTACTaGGCGTTAATGGAGGGCGGA +
Preference number: 2 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEAAKGY*ALMEGG
Trigger: TCCGCCCTCCATTAACGCTCAGTACCCTTTAGCAGC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAATGGTCTCGCTCTCTTaGCCTCGTGATCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEMVSLS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAAGAGAGCGAGACCAT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR GCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTGGGCATTGGTGGTGTaGGCCTGTAATCCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEWALVV*ACNPSY
Trigger: GTAGCTAGGATTACAGGCGCACACCACCAATGCCCA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAAAGGAAGCCAAGCATaGAGTAGAACGTGGGGCCGT +
Preference number: 2 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEKGSQA*SRTWGR
Trigger: ACGGCCCCACGTTCTACTCCATGCTTGGCTTCCTTT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCCGGGAGGCGGAGGTTaGAGTGAGCCAAGATTACGC +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVPGGGG*SEPRLR
Trigger: GCGTAATCTTGGCTCACTGCAACCTCCGCCTCCCGG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAAGGCGGAGGTTGCAGTaGGCCAAGATTACGCCACAG +
Preference number: 2 (lower is better)
Translates to: TELDKVGFILVGDQMVLIRRRLQ*AKITPQ
Trigger: CTGTGGCGTAATCTTGGCTCACTGCAACCTCCGCCT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAGGCGGAGGTTGCAGTaGGCCAAGATTACGCCACAG +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVRRRLQ*AKITPQ
Trigger: CTGTGGCGTAATCTTGGCTCACTGCAACCTCCGCCT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGTTTGCAGGCTTGCCTaGGATTGCCCTGGGGACACT +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEVCRLA*DCPGDT
Trigger: AGTGTCCCCAGGGCAATCTCAGGCAAGCCTGCAAAC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTCAGCCAGGCTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVSARLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCAGCCTGGCTGA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACAGGCTGGAGTACAGTaGCGCGATCTAGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEQAGVQ*RDLGSL
Trigger: CAGTGAGCCTAGATCGCGCCACTGTACTCCAGCCTG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGCTGCTAAAGGGTACTaGGCGTTAATGGAGGGCGGA +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVAAKGY*ALMEGG
Trigger: TCCGCCCTCCATTAACGCTCAGTACCCTTTAGCAGC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGCATGGAGTAGAACGTaGGGCCGTCAGCTGCTAAAG +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEAWSRT*GRQLLK
Trigger: CTTTAGCAGCTGACGGCCCCACGTTCTACTCCATGC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR GCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATGGGCATTGGTGGTGTaGGCCTGTAATCCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEWALVV*ACNPSY
Trigger: GTAGCTAGGATTACAGGCGCACACCACCAATGCCCA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAAAAGGAAGCCAAGCATaGAGTAGAACGTGGGGCCGT +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEKGSQA*SRTWGR
Trigger: ACGGCCCCACGTTCTACTCCATGCTTGGCTTCCTTT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCCATGTTGGTCAGGATaGTCTCGCTCTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVPCWSG*SRSLDL
Trigger: GAGGTCAAGAGAGCGAGACCATCCTGACCAACATGG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACCATGTTGGTCAGGATaGTCTCGCTCTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEPCWSG*SRSLDL
Trigger: GAGGTCAAGAGAGCGAGACCATCCTGACCAACATGG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGCAGGAAGCAGATGACTaGATTATAGGGATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEQEADD*IIGMEE
Trigger: TTCTTCCATCCCTATAATCCAGTCATCTGCTTCCTG...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAGCCTCCCAAGTAGTTaGGTTTACAGGCGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVSLPSS*VYRRVP
Trigger: TGGCACACGCCTGTAAACCCAACTACTTGGGAGGCT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGTAGCAGCACTCCACTaGGTAGGGCGTCAGAATCAT +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEVAALH*VGRQNH
Trigger: ATGATTCTGACGCCCTACCCAGTGGAGTGCTGCTAC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACCTGGGTTTCTGACTTaGGCACTTGGGAAACCAGGT +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEPGFLT*ALGKPG
Trigger: ACCTGGTTTCCCAAGTGCCCAAGTCAGAAACCCAGG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACAAGACCAACCTGAATaGCATGGTGAGACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: TELDKVGFILVGDQMVLIQDQPE*HGETLS
Trigger: AGACAGGGTCTCACCATGTCATTCAGGTTGGTCTTG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACAAGACCAACCTGAATaGCATGGTGAGACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEQDQPE*HGETLS
Trigger: AGACAGGGTCTCACCATGTCATTCAGGTTGGTCTTG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGGTGGTGTTGGAGGTTaGATCAACTGTAGTGACGTG +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEGGVGG*INCSDV
Trigger: CACGTCACTACAGTTGATTCAACCTCCAACACCACC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAAGAAAAGTCAGACCTaGCAAAAAGATCATCTTCCC +
Preference number: 2 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEKKSQT*QKDHLP
Trigger: GGGAAGATGATCTTTTTGCCAGGTCTGACTTTTCTT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGCACCACACCCAGCTCTaGAAGAAATATTTTTCACTA +
Preference number: 2 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEHHTQL*KKYFSL
Trigger: TAGTGAAAAATATTTCTTCCAGAGCTGGGTGTGGTG...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAAACACAAAAACTAGCTaGGCATTGGTGGTGTGCGCC +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIENTKTS*ALVVCA
Trigger: GGCGCACACCACCAATGCCCAGCTAGTTTTTGTGTT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAACACAAAAACTAGCTaGGCATTGGTGGTGTGCGCC +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVNTKTS*ALVVCA
Trigger: GGCGCACACCACCAATGCCCAGCTAGTTTTTGTGTT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATGCCTGAGATTGCCCTaGGGACACTTACATTCAAAG +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIECLRLP*GHLHSK
Trigger: CTTTGAATGTAAGTGTCCCCAGGGCAATCTCAGGCA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTGCCTGAGATTGCCCTaGGGACACTTACATTCAAAG +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVCLRLP*GHLHSK
Trigger: CTTTGAATGTAAGTGTCCCCAGGGCAATCTCAGGCA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGAGACCAAATGGTTTTaGTATGTGGTTCCTAGACCA +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEETKWF*YVVPRP
Trigger: TGGTCTAGGAACCACATATCAAAACCATTTGGTCTC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGAGACCAAATGGTTTTaGTATGTGGTTCCTAGACCA +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVETKWF*YVVPRP
Trigger: TGGTCTAGGAACCACATATCAAAACCATTTGGTCTC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTCAACTGTAGTGACGTaGATCATCTCTTTTCTCCCA +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVSTVVT*IISFLP
Trigger: TGGGAGAAAAGAGATGATTCACGTCACTACAGTTGA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATCAACTGTAGTGACGTaGATCATCTCTTTTCTCCCA +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIESTVVT*IISFLP
Trigger: TGGGAGAAAAGAGATGATTCACGTCACTACAGTTGA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCTGGTGAGGCCTGAATaGAGAATAACAAGTTTACCA +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVLVRPE*RITSLP
Trigger: TGGTAAACTTGTTATTCTGCATTCAGGCCTCACCAG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATATGAAAGAGCTAGTTaGAAAGGAAGCCAAGCATGG +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEYERAS*KGSQAW
Trigger: CCATGCTTGGCTTCCTTTCCAACTAGCTCTTTCATA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATATATGAAAGAGCTAGTTaGAAAGGAAGCCAAGCATGG +
Preference number: 2 (lower is better)
Translates to: TELDKVGFILVGDQMVLIYERAS*KGSQAW
Trigger: CCATGCTTGGCTTCCTTTCCAACTAGCTCTTTCATA...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACAGGAAGCAGATGACTaGATTATAGGGATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: TELDKVGFILVGDQMVLIQEADD*IIGMEE
Trigger: TTCTTCCATCCCTATAATCCAGTCATCTGCTTCCTG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAAGGAATGAGTTGATTTaGAGCTCAGGAAAGAGATCC +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIERNELI*SSGKRS
Trigger: GGATCTCTTTCCTGAGCTCCAAATCAACTCATTCCT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATCATTATACACTTACTaGGCACTTACCACATGCCAA +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIESLYTY*ALTTCQ
Trigger: TTGGCATGTGGTAAGTGCTCAGTAAGTGTATAATGA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTATCTAGGAATGAGTTaGTTTGGAGCTCAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVYLGMS*FGAQER
Trigger: TCTTTCCTGAGCTCCAAATCAACTCATTCCTAGATA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATATCTAGGAATGAGTTaGTTTGGAGCTCAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEYLGMS*FGAQER
Trigger: TCTTTCCTGAGCTCCAAATCAACTCATTCCTAGATA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAAAGAAAAGTCAGACCTaGCAAAAAGATCATCTTCCC +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEKKSQT*QKDHLP
Trigger: GGGAAGATGATCTTTTTGCCAGGTCTGACTTTTCTT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACACCACACCCAGCTCTaGAAGAAATATTTTTCACTA +
Preference number: 2 (lower is better)
Translates to: TELDKVGFILVGDQMVLIHHTQL*KKYFSL
Trigger: TAGTGAAAAATATTTCTTCCAGAGCTGGGTGTGGTG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAATGGTTTTGATATGTaGTTCCTAGACCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVNGFDM*FLDQQH
Trigger: ATGCTGCTGGTCTAGGAACCACATATCAAAACCATT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGTGTGCCACCACGCCTaGCTAATTGTTATATATTTT +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEVCHHA*LIVIYF
Trigger: AAAATATATAACAATTAGCCAGGCGTGGTGGCACAC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGTGTGCCACCACGCCTaGCTAATTGTTATATATTTT +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVVCHHA*LIVIYF
Trigger: AAAATATATAACAATTAGCCAGGCGTGGTGGCACAC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAAAATAAATGATGCCTaGGTTTCTGACTTGGGCACT +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVKINDA*VSDLGT
Trigger: AGTGCCCAAGTCAGAAACCCAGGCATCATTTATTTT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACTGGTTAACTGCCCATaGTACATCAATTTAATGGAA +
Preference number: 2 (lower is better)
Translates to: TELDKVGFILVGDQMVLILVNCP*YINLME
Trigger: TTCCATTAAATTGATGTATCATGGGCAGTTAACCAG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCTGGTTAACTGCCCATaGTACATCAATTTAATGGAA +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVLVNCP*YINLME
Trigger: TTCCATTAAATTGATGTATCATGGGCAGTTAACCAG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCTCCCATTTACTCAATaGTTAGCTTTCTTCTTATGG +
Preference number: 2 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVLPFTQ*LAFFLW
Trigger: CCATAAGAAGAAAGCTAATCATTGAGTAAATGGGAG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATATCTGAAACACACATCTaGTCAAGAACCACTGTTTTA +
Preference number: 2 (lower is better)
Translates to: TELDKVGFILVGDQMVLISETHI*SRTTVL
Trigger: TAAAACAGTGGTTCTTGACCAGATGTGTGTTTCAGA...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATCTGAAACACACATCTaGTCAAGAACCACTGTTTTA +
Preference number: 2 (lower is better)
Translates to: TPTNVGFSVLTNILWYIESETHI*SRTTVL
Trigger: TAAAACAGTGGTTCTTGACCAGATGTGTGTTTCAGA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR CCA 72 bp GTCAGGATGGGTTTGCAGGCTTGCCTGAGATTGCCCTaGGGACACTTACATTCAAAGGCAGAGAACCGTATG +
Preference number: 3 (lower is better)
Translates to: VRMGLQACLRLP*GHLHSKAENRM
Trigger: CATACGGTTCTCTGCCTTTGAATGTAAGTGTCCCCAGGGCAATCTCAGGCAAGCCTGCAAACCCATCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CAA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAGATGGGAGGATCACTaGGGCCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLERWEDH*GPGGGG
Trigger: ACCTCCGCCTCCCGGGCCCAAGTGATCCTCCCATCT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CAA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAAGATGGGAGGATCACTaGGGCCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: TELDKVGFILVGDQMVLIRWEDH*GPGGGG
Trigger: ACCTCCGCCTCCCGGGCCCAAGTGATCCTCCCATCT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCAGGCTTGCCTGAGATaGCCCTGGGGACACTTACAT +
Preference number: 3 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVQACLR*PWGHLH
Trigger: ATGTAAGTGTCCCCAGGGCAATCTCAGGCAAGCCTG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR GCA 72 bp GGAAGTGGGGAGTTAGGTTCGGAGAGGATTATGGAATaGCTAGCATGTCAAATCAAAGAATTGGGCTTTATT +
Preference number: 3 (lower is better)
Translates to: GSGELGSERIME*LACQIKELGFI
Trigger: AATAAAGCCCAATTCTTTGATTTGACATGCTAGGCATTCCATAATCCTCTCCGAACCTAACTCCCCACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CAA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAAGAGTCAGGATGGGTTaGCAGGCTTGCCTGAGATTG +
Preference number: 3 (lower is better)
Translates to: TPTNVGFSVLTNILWYIERVRMG*QACLRL
Trigger: CAATCTCAGGCAAGCCTGCAAACCCATCCTGACTCT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR TCA 72 bp AAAGGCAGAGAACCGTATGTCATCCCTGGTGAGGCCTaGATGCAGAATAACAAGTTTACCAATCATTATACA +
Preference number: 3 (lower is better)
Translates to: KGREPYVIPGEA*MQNNKFTNHYT
Trigger: TGTATAATGATTGGTAAACTTGTTATTCTGCATTCAGGCCTCACCAGGGATGACATACGGTTCTCTGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR GCA 72 bp GCAGAGAACCGTATGTCATCCCTGGTGAGGCCTGAATaGAGAATAACAAGTTTACCAATCATTATACACTTA +
Preference number: 3 (lower is better)
Translates to: AENRMSSLVRPE*RITSLPIIIHL
Trigger: TAAGTGTATAATGATTGGTAAACTTGTTATTCTGCATTCAGGCCTCACCAGGGATGACATACGGTTCTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR CCA 72 bp GAACTTGGTGGCCATGTAGAGACAGGAGATAAAGAATaGCATAAAAATGATGCCCAGCTAAATGCAATGTTG +
Preference number: 3 (lower is better)
Translates to: ELGGHVETGDKE*HKNDAQLNAML
Trigger: CAACATTGCATTTAGCTGGGCATCATTTTTATGCCATTCTTTATCTCCTGTCTCTACATGGCCACCAAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR TCA 72 bp CTCAAACCTATGCATATTCATGGTGGTGTTGGAGGTTaGATCAACTGTAGTGACGTGAATCATCTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: LKPMHIHGGVGG*INCSDVNHLFS
Trigger: AGAAAAGAGATGATTCACGTCACTACAGTTGATTCAACCTCCAACACCACCATGAATATGCATAGGTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR GCA 72 bp CTTACACTCAGGAATCTAGCTAAAAGCTCAAACCTATaGATATTCATGGTGGTGTTGGAGGTTGAATCAACT +
Preference number: 3 (lower is better)
Translates to: LTLRNLAKSSNL*IFMVVLEVEST
Trigger: AGTTGATTCAACCTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAGTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAAGAGGAGCACAGAATaGGATAAAGTAGGGTTTATC +
Preference number: 3 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVKRSTE*DKVGFI
Trigger: GATAAACCCTACTTTATCCAATTCTGTGCTCCTCTT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CAA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAATATTCATGGTGGTGTaGGAGGTTGAATCAACTGTA +
Preference number: 3 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEIFMVV*EVESTV
Trigger: TACAGTTGATTCAACCTCCAACACCACCATGAATAT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CAA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACACAAAACATCCACATaGTTCCCTAAAGTTATGCTA +
Preference number: 3 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEHKTST*FPKVML
Trigger: TAGCATAACTTTAGGGAACAATGTGGATGTTTTGTG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCACAAAACATCCACATaGTTCCCTAAAGTTATGCTA +
Preference number: 3 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVHKTST*FPKVML
Trigger: TAGCATAACTTTAGGGAACAATGTGGATGTTTTGTG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGCTCTCTTGACCTCGTaGTCCGCCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEALLTS*SARLGL
Trigger: GAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGAGC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGATGGTCTCGCTCTCTTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEMVSLS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAAGAGAGCGAGACCAT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAGGCGGAGGTTGCAGTaGGCCAAGATTACGCCACAG +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLERRRLQ*AKITPQ
Trigger: CTGTGGCGTAATCTTGGCTCACTGCAACCTCCGCCT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGGTGGGAGGATCACTTaGGGCCAAGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEGGRIT*GQEFET
Trigger: GGTCTCGAACTCTTGGCCTCAAGTGATCCTCCCACC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGACCATAGCCGTGGGCTaGAAAAGGGGCCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLETIAVG*KRGLGQ
Trigger: TTGGCCAAGGCCCCTTTTGCAGCCCACGGCTATGGT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTCAGCCAGGCTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLESARLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCAGCCTGGCTGA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCGGAAGGCCAGGGGCTaGAGGTCCGACACAGCACGA +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVRKARG*RSDTAR
Trigger: TCGTGCTGTGTCGGACCTGCAGCCCCTGGCCTTCCG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR GCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGATGGGTTTGCAGGCTTaGCTGAGATTGCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEMGLQA*LRLPWG
Trigger: TCCCCAGGGCAATCTCAGGCAAGCCTGCAAACCCAT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGCATGGAGTAGAACGTaGGGCCGTCAGCTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEAWSRT*GRQLLK
Trigger: CTTTAGCAGCTGACGGCCCCACGTTCTACTCCATGC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGCGTGTGAAGTTAGCTaGTGCCGTGGGAGACAATTC +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEACEVS*CRGRQF
Trigger: GAATTGTCTCCCACGGCAGCAGCTAACTTCACACGC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAGCCTCCCAAGTAGTTaGGTTTACAGGCGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLESLPSS*VYRRVP
Trigger: TGGCACACGCCTGTAAACCCAACTACTTGGGAGGCT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGTAGCAGCACTCCACTaGGTAGGGCGTCAGAATCAT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEVAALH*VGRQNH
Trigger: ATGATTCTGACGCCCTACCCAGTGGAGTGCTGCTAC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGCCTGGGTTTCTGACTTaGGCACTTGGGAAACCAGGT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEPGFLT*ALGKPG
Trigger: ACCTGGTTTCCCAAGTGCCCAAGTCAGAAACCCAGG...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGTAATCCCAGTGCTTTaGCAGACCAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEVIPVL*QTKVGG
Trigger: TCCTCCCACCTTGGTCTGCCAAAGCACTGGGATTAC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAGGAGGGAAAGGAAGTaGGGAGTTAGGTTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLERRERK*GVRFGE
Trigger: CTCTCCGAACCTAACTCCCCACTTCCTTTCCCTCCT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATCCAGGTCTCACCGGTaGGACAGCACCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIESRSHR*DSTSER
Trigger: TCGCTCTGAGGTGCTGTCTCACCGGTGAGACCTGGA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGGCCTTGGATACCGATaGGGTACTCCATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEGLGYR*GTPWWR
Trigger: CCGCCACCATGGAGTACCTCATCGGTATCCAAGGCC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGCAAGACCAACCTGAATaGCATGGTGAGACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEQDQPE*HGETLS
Trigger: AGACAGGGTCTCACCATGTCATTCAGGTTGGTCTTG...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGGTGGTGTTGGAGGTTaGATCAACTGTAGTGACGTG +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEGGVGG*INCSDV
Trigger: CACGTCACTACAGTTGATTCAACCTCCAACACCACC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACCGGGAGGCGGAGGTTaGAGTGAGCCAAGATTACGC +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEPGGGG*SEPRLR
Trigger: GCGTAATCTTGGCTCACTGCAACCTCCGCCTCCCGG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGGCGGGCGGCCAAAGTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIGGRPK*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTTTGGCCGCCCGCC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATCTGGACAATATTGCTaGCGGCCACCCGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIESGQYC*RPPGRR
Trigger: CCTCCGACCGGGTGGCCGCCAGCAATATTGTCCAGA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGAGGTTCACATGATATaGGGTCCGACTCCGAAGACA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEEVHMI*GPTPKT
Trigger: TGTCTTCGGAGTCGGACCCCATATCATGTGAACCTC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAACACAAAAACTAGCTaGGCATTGGTGGTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLENTKTS*ALVVCA
Trigger: GGCGCACACCACCAATGCCCAGCTAGTTTTTGTGTT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
3UTR CAA 72 bp TCCCTAAATCTGGAGGGTGAGCTATCTAGGAATGAGTaGATTTGGAGCTCAGGAAAGAGATCCAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: SLNLEGELSRNE*IWSSGKRSRLA
Trigger: TGCCAATCTGGATCTCTTTCCTGAGCTCCAAATCAACTCATTCCTAGATAGCTCACCCTCCAGATTTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGTTTGCAGGCTTGCCTaGGATTGCCCTGGGGACACT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIVCRLA*DCPGDT
Trigger: AGTGTCCCCAGGGCAATCTCAGGCAAGCCTGCAAAC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGGTGGGAGGATCACTTaGGGCCAAGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVGGRIT*GQEFET
Trigger: GGTCTCGAACTCTTGGCCTCAAGTGATCCTCCCACC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTCATCTGGACAATATTaGTGGCGGCCACCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVSSGQY*WRPPGR
Trigger: CCGACCGGGTGGCCGCCAGCAATATTGTCCAGATGA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR GCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAACCATAGCCGTGGGCTaGAAAAGGGGCCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLITIAVG*KRGLGQ
Trigger: TTGGCCAAGGCCCCTTTTGCAGCCCACGGCTATGGT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAATCAGCCAGGCTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIESARLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCAGCCTGGCTGA...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACTGCAAAAGGGGCCTTaGCCAAGGCTGCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLILQKGP*PRLPGS
Trigger: ACTACCTGGCAGCCTTGGCCAAGGCCCCTTTTGCAG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACAGGCTGGAGTACAGTaGCGCGATCTAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIQAGVQ*RDLGSL
Trigger: CAGTGAGCCTAGATCGCGCCACTGTACTCCAGCCTG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTCAGGCTGGAGTACAGTaGCGCGATCTAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVQAGVQ*RDLGSL
Trigger: CAGTGAGCCTAGATCGCGCCACTGTACTCCAGCCTG...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTGCCTGAGATTGCCCTaGGGACACTTACATTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLECLRLP*GHLHSK
Trigger: CTTTGAATGTAAGTGTCCCCAGGGCAATCTCAGGCA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTTTGACAAAATTAGCTaGGTGCAGTGGTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEFDKIS*VQWCTP
Trigger: AGGGGTGCACCACTGCACCCAGCTAATTTTGTCAAA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAAGGAGGAGGTTCACATaGTATGGGGTCCGACTCCGA +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIERRRFT*YGVRLR
Trigger: TCGGAGTCGGACCCCATATCATGTGAACCTCCTCCT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAGGAGGAGGTTCACATaGTATGGGGTCCGACTCCGA +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVRRRFT*YGVRLR
Trigger: TCGGAGTCGGACCCCATATCATGTGAACCTCCTCCT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGCTGCTAAAGGGTACTaGGCGTTAATGGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEAAKGY*ALMEGG
Trigger: TCCGCCCTCCATTAACGCTCAGTACCCTTTAGCAGC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGCTGCTAAAGGGTACTaGGCGTTAATGGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIAAKGY*ALMEGG
Trigger: TCCGCCCTCCATTAACGCTCAGTACCCTTTAGCAGC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGATCCCTGGTGAGGCCTaGATGCAGAATAACAAGTTT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEIPGEA*MQNNKF
Trigger: AAACTTGTTATTCTGCATTCAGGCCTCACCAGGGAT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTGTGAAGTTAGCTGCTaGCGTGGGAGACAATTCATA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLECEVSC*RGRQFI
Trigger: TATGAATTGTCTCCCACGGCAGCAGCTAACTTCACA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAATGGGTTTGCAGGCTTaGCTGAGATTGCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEMGLQA*LRLPWG
Trigger: TCCCCAGGGCAATCTCAGGCAAGCCTGCAAACCCAT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGCATGTAATACAGCGCTaGCCCTTCATGCTCATCATA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEHVIQR*PFMLII
Trigger: TATGATGAGCATGAAGGGCCAGCGCTGTATTACATG...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGCATGGAGTAGAACGTaGGGCCGTCAGCTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIAWSRT*GRQLLK
Trigger: CTTTAGCAGCTGACGGCCCCACGTTCTACTCCATGC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACTAGTCCCAGCTAGTTaGGAGGCTGGGGTAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLILVPAS*EAGVRG
Trigger: ACCTCTTACCCCAGCCTCCCAACTAGCTGGGACTAG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTATTAGCTGGGTGCAGTaGTGCACCCCTCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVISWVQ*CTPLVP
Trigger: TGGGACTAGAGGGGTGCACCACTGCACCCAGCTAAT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAATCGGTCGAGGATACTaGGAGTCAGGAAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEIGRGY*ESGRHH
Trigger: ATGGTGCCTTCCTGACTCTCAGTATCCTCGACCGAT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTCAACTGTAGTGACGTaGATCATCTCTTTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLESTVVT*IISFLP
Trigger: TGGGAGAAAAGAGATGATTCACGTCACTACAGTTGA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGCCACATGCCAAGCCCTaGACTAAATGTTTACCTATA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEPHAKP*TKCLPI
Trigger: TATAGGTAAACATTTAGTTCAGGGCTTGGCATGTGG...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAAACAAAGCATAGACTaGGGGGTACAATCCTACTCT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEKQSID*GVQSYS
Trigger: AGAGTAGGATTGTACCCCTCAGTCTATGCTTTGTTT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621781.4
CDS-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGCGTGTGAAGTTAGCTaGTGCCGTGGGAGACAATTC +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVACEVS*CRGRQF
Trigger: GAATTGTCTCCCACGGCAGCAGCTAACTTCACACGC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGGCCTTGGCCAAGGCTaGCAGGTAGTCCATGTAATA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIGLGQG*QVVHVI
Trigger: TATTACATGGACTACCTGGCAGCCTTGGCCAAGGCC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGGCCTTGGCCAAGGCTaGCAGGTAGTCCATGTAATA +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVGLGQG*QVVHVI
Trigger: TATTACATGGACTACCTGGCAGCCTTGGCCAAGGCC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAAAGGAAGCCAAGCATaGAGTAGAACGTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVKGSQA*SRTWGR
Trigger: ACGGCCCCACGTTCTACTCCATGCTTGGCTTCCTTT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAAAAGGAAGCCAAGCATaGAGTAGAACGTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIKGSQA*SRTWGR
Trigger: ACGGCCCCACGTTCTACTCCATGCTTGGCTTCCTTT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTATGAAAGAGCTAGTTaGAAAGGAAGCCAAGCATGG +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEYERAS*KGSQAW
Trigger: CCATGCTTGGCTTCCTTTCCAACTAGCTCTTTCATA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACCATGTTGGTCAGGATaGTCTCGCTCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIPCWSG*SRSLDL
Trigger: GAGGTCAAGAGAGCGAGACCATCCTGACCAACATGG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGTAGCAGCACTCCACTaGGTAGGGCGTCAGAATCAT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIVAALH*VGRQNH
Trigger: ATGATTCTGACGCCCTACCCAGTGGAGTGCTGCTAC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAGGAATGAGTTGATTTaGAGCTCAGGAAAGAGATCC +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLERNELI*SSGKRS
Trigger: GGATCTCTTTCCTGAGCTCCAAATCAACTCATTCCT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAGGAGGGAAAGGAAGTaGGGAGTTAGGTTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVRRERK*GVRFGE
Trigger: CTCTCCGAACCTAACTCCCCACTTCCTTTCCCTCCT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGGTGGTGTTGGAGGTTaGATCAACTGTAGTGACGTG +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVGGVGG*INCSDV
Trigger: CACGTCACTACAGTTGATTCAACCTCCAACACCACC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTCATTATACACTTACTaGGCACTTACCACATGCCAA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLESLYTY*ALTTCQ
Trigger: TTGGCATGTGGTAAGTGCTCAGTAAGTGTATAATGA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTATCTAGGAATGAGTTaGTTTGGAGCTCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEYLGMS*FGAQER
Trigger: TCTTTCCTGAGCTCCAAATCAACTCATTCCTAGATA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGAGGTTCACATGATATaGGGTCCGACTCCGAAGACA +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEEVHMI*GPTPKT
Trigger: TGTCTTCGGAGTCGGACCCCATATCATGTGAACCTC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAAAGTTCCCTGGCAAGTaGGAGGGAGGACATGATGTT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIKFPGK*EGGHDV
Trigger: AACATCATGTCCTCCCTCCCACTTGCCAGGGAACTT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAAGTTCCCTGGCAAGTaGGAGGGAGGACATGATGTT +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVKFPGK*EGGHDV
Trigger: AACATCATGTCCTCCCTCCCACTTGCCAGGGAACTT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAAAATAAATGATGCCTaGGTTTCTGACTTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEKINDA*VSDLGT
Trigger: AGTGCCCAAGTCAGAAACCCAGGCATCATTTATTTT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAAGGGCAGAGAGGAATaGATGGTGAAACTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEKGREE*MVKLVF
Trigger: AAAAACTAGTTTCACCATCCATTCCTCTCTGCCCTT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGGAACACAGGCTTTATaGGGTGTAAAGGAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIGTQAL*GVKEGK
Trigger: CTTTCCCTCCTTTACACCTCATAAAGCCTGTGTTCC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGGAACACAGGCTTTATaGGGTGTAAAGGAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEGTQAL*GVKEGK
Trigger: CTTTCCCTCCTTTACACCTCATAAAGCCTGTGTTCC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATATCGAACACTGAAGGTTaGCAGATTCAGGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLISNTEG*QIQDEA
Trigger: CGCTTCATCCTGAATCTGCCAACCTTCAGTGTTCGA...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATATTTGACAAAATTAGCTaGGTGCAGTGGTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIFDKIS*VQWCTP
Trigger: AGGGGTGCACCACTGCACCCAGCTAATTTTGTCAAA...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAATCCCTGGTGAGGCCTaGATGCAGAATAACAAGTTT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIIPGEA*MQNNKF
Trigger: AAACTTGTTATTCTGCATTCAGGCCTCACCAGGGAT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATATGTGAAGTTAGCTGCTaGCGTGGGAGACAATTCATA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLICEVSC*RGRQFI
Trigger: TATGAATTGTCTCCCACGGCAGCAGCTAACTTCACA...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACATGTAATACAGCGCTaGCCCTTCATGCTCATCATA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIHVIQR*PFMLII
Trigger: TATGATGAGCATGAAGGGCCAGCGCTGTATTACATG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGTTAGGAGCCCTGTTTaGGGAAGGAAATGTTATCCA +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEVRSPV*GRKCYP
Trigger: TGGATAACATTTCCTTCCCCAAACAGGGCTCCTAAC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGTTAGGAGCCCTGTTTaGGGAAGGAAATGTTATCCA +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVVRSPV*GRKCYP
Trigger: TGGATAACATTTCCTTCCCCAAACAGGGCTCCTAAC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATATCAACTGTAGTGACGTaGATCATCTCTTTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLISTVVT*IISFLP
Trigger: TGGGAGAAAAGAGATGATTCACGTCACTACAGTTGA...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACCACATGCCAAGCCCTaGACTAAATGTTTACCTATA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIPHAKP*TKCLPI
Trigger: TATAGGTAAACATTTAGTTCAGGGCTTGGCATGTGG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACTGGTGAGGCCTGAATaGAGAATAACAAGTTTACCA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLILVRPE*RITSLP
Trigger: TGGTAAACTTGTTATTCTGCATTCAGGCCTCACCAG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTATGAAAGAGCTAGTTaGAAAGGAAGCCAAGCATGG +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVYERAS*KGSQAW
Trigger: CCATGCTTGGCTTCCTTTCCAACTAGCTCTTTCATA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACAGGAAGCAGATGACTaGATTATAGGGATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEQEADD*IIGMEE
Trigger: TTCTTCCATCCCTATAATCCAGTCATCTGCTTCCTG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATATCATTATACACTTACTaGGCACTTACCACATGCCAA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLISLYTY*ALTTCQ
Trigger: TTGGCATGTGGTAAGTGCTCAGTAAGTGTATAATGA...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAAAGAAAAGTCAGACCTaGCAAAAAGATCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIKKSQT*QKDHLP
Trigger: GGGAAGATGATCTTTTTGCCAGGTCTGACTTTTCTT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAACCTATGCATATTCATaGTGGTGTTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLITYAYS*WCWRLN
Trigger: ATTCAACCTCCAACACCACCATGAATATGCATAGGT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAACCTATGCATATTCATaGTGGTGTTGGAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIETYAYS*WCWRLN
Trigger: ATTCAACCTCCAACACCACCATGAATATGCATAGGT...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGTGTGCCACCACGCCTaGCTAATTGTTATATATTTT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIVCHHA*LIVIYF
Trigger: AAAATATATAACAATTAGCCAGGCGTGGTGGCACAC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAAAAATAAATGATGCCTaGGTTTCTGACTTGGGCACT +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIKINDA*VSDLGT
Trigger: AGTGCCCAAGTCAGAAACCCAGGCATCATTTATTTT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACTGGTTAACTGCCCATaGTACATCAATTTAATGGAA +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIELVNCP*YINLME
Trigger: TTCCATTAAATTGATGTATCATGGGCAGTTAACCAG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR TCA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACTCCCATTTACTCAATaGTTAGCTTTCTTCTTATGG +
Preference number: 4 (lower is better)
Translates to: TPTNVGFSVLTNILWYIELPFTQ*LAFFLW
Trigger: CCATAAGAAGAAAGCTAATCATTGAGTAAATGGGAG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAGAGAGGATTATGGAATaGCTAGCATGTCAAATCAAA +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIERIME*LACQIK
Trigger: TTTGATTTGACATGCTAGGCATTCCATAATCCTCTC...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGAGAGGATTATGGAATaGCTAGCATGTCAAATCAAA +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVERIME*LACQIK
Trigger: TTTGATTTGACATGCTAGGCATTCCATAATCCTCTC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAATGTTATCCAGGTCATaGATGCCATTTTTGTCAATG +
Preference number: 4 (lower is better)
Translates to: TELDKVGFILVGDQMVLIMLSRS*MPFLSM
Trigger: CATTGACAAAAATGGCATCCATGACCTGGATAACAT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTATGTTATCCAGGTCATaGATGCCATTTTTGTCAATG +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVMLSRS*MPFLSM
Trigger: CATTGACAAAAATGGCATCCATGACCTGGATAACAT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTACAGGAGATAAAGAATaGCATAAAAATGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVTGDKE*HKNDAQ
Trigger: CTGGGCATCATTTTTATGCCATTCTTTATCTCCTGT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR GCA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTTTCTGAATATATTCTaGAAACTGTACAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVFLNIF*KLYSVS
Trigger: GGAGACACTGTACAGTTTGCAGAATATATTCAGAAA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS TCA 90 bp CCCGGTCGGAGGCGACAAGAACATAGTCGGGGCCTTGGATACCGATaGGGTACTCCATGGTGGCGGAAGGCCAGGGGCTGCAGGTCCGAC +
Preference number: 5 (lower is better)
Translates to: PGRRRQEHSRGLGYR*GTPWWRKARGCRSD
Trigger: GTCGGACCTGCAGCCCCTGGCCTTCCGCCACCATGGAGTACCTCATCGGTATCCAAGGCCCCGACTATGTTCTTGTCGCCTCCGACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS CCA 90 bp AGGGGCCTTGGCCAAGGCTGCCAGGTAGTCCATGTAATACAGCGCTaGCCCTTCATGCTCATCATAGCCAGCCAGGAGGAGGTTCACATG +
Preference number: 5 (lower is better)
Translates to: RGLGQGCQVVHVIQR*PFMLIIASQEEVHM
Trigger: CATGTGAACCTCCTCCTGGCTGGCTATGATGAGCATGAAGGGCCAGCGCTGTATTACATGGACTACCTGGCAGCCTTGGCCAAGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373237.4
ENST00000621781.4
ENST00000630477.1
CDS GCA 90 bp CCGACTCCGAAGACAGTCAGCCAGGTTTCGGCGTGTGAAGTTAGCTaGTGCCGTGGGAGACAATTCATATCCATTTCGCATCTTATAAAG +
Preference number: 5 (lower is better)
Translates to: PTPKTVSQVSACEVS*CRGRQFISISHLIK
Trigger: CTTTATAAGATGCGAAATGGATATGAATTGTCTCCCACGGCAGCAGCTAACTTCACACGCCGAAACCTGGCTGACTGTCTTCGGAGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR CAA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGGATGGGTTTGCAGGCTaGCCTGAGATTGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEDGFAG*PEIALG
Trigger: CCCCAGGGCAATCTCAGGCAAGCCTGCAAACCCATC...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS GCA 90 bp ACTCCGAAGACAGTCAGCCAGGTTTCGGCGTGTGAAGTTAGCTGCTaGCGTGGGAGACAATTCATATCCATCTTTTGTACACTCAGAGTA +
Preference number: 5 (lower is better)
Translates to: TPKTVSQVSACEVSC*RGRQFISIFCTLRV
Trigger: TACTCTGAGTGTACAAAAGATGGATATGAATTGTCTCCCACGGCAGCAGCTAACTTCACACGCCGAAACCTGGCTGACTGTCTTCGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621781.4
ENST00000630477.1
CDS GCA 90 bp ACTCCGAAGACAGTCAGCCAGGTTTCGGCGTGTGAAGTTAGCTGCTaGCGTGGGAGACAATTCATATCCATTTCGCATCTTATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: TPKTVSQVSACEVSC*RGRQFISISHLIKL
Trigger: CAACTTTATAAGATGCGAAATGGATATGAATTGTCTCCCACGGCAGCAGCTAACTTCACACGCCGAAACCTGGCTGACTGTCTTCGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR CAA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGTGTAATCCCAGTGCTTaGGCAGACCAAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLECNPSA*ADQGGR
Trigger: CCTCCCACCTTGGTCTGCCAAAGCACTGGGATTACA...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAGAGTCAGGATGGGTTaGCAGGCTTGCCTGAGATTG +
Preference number: 5 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLERVRMG*QACLRL
Trigger: CAATCTCAGGCAAGCCTGCAAACCCATCCTGACTCT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS CCA 90 bp CAGGTCATGGATGCCATTTTTGTCAATGATTCGAACACTGAAGGTTaGCAGATTCAGGATGAAGCGTTTCTGGAGCTCCTCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: QVMDAIFVNDSNTEG*QIQDEAFLELLQTF
Trigger: AAATGTCTGGAGGAGCTCCAGAAACGCTTCATCCTGAATCTGCCAACCTTCAGTGTTCGAATCATTGACAAAAATGGCATCCATGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373237.4
ENST00000621781.4
ENST00000630477.1
CDS-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGATGGGTTTGCAGGCTaGCCTGAGATTGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVDGFAG*PEIALG
Trigger: CCCCAGGGCAATCTCAGGCAAGCCTGCAAACCCATC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTTCATCTGGACAATATaGCTGGCGGCCACCCGGTCG +
Preference number: 5 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVFIWTI*LAATRS
Trigger: CGACCGGGTGGCCGCCAGCAATATTGTCCAGATGAA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR CAA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACAGGCTTGCCTGAGATaGCCCTGGGGACACTTACAT +
Preference number: 5 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEQACLR*PWGHLH
Trigger: ATGTAAGTGTCCCCAGGGCAATCTCAGGCAAGCCTG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACAGGCTTGCCTGAGATaGCCCTGGGGACACTTACAT +
Preference number: 5 (lower is better)
Translates to: TELDKVGFILVGDQMVLIQACLR*PWGHLH
Trigger: ATGTAAGTGTCCCCAGGGCAATCTCAGGCAAGCCTG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTGTAATCCCAGTGCTTaGGCAGACCAAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVCNPSA*ADQGGR
Trigger: CCTCCCACCTTGGTCTGCCAAAGCACTGGGATTACA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAAACATAGTCGGGGCCTaGGATACCGATGAGGTACTC +
Preference number: 5 (lower is better)
Translates to: TELDKVGFILVGDQMVLINIVGA*DTDEVL
Trigger: GAGTACCTCATCGGTATCCAAGGCCCCGACTATGTT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTAGAGTCAGGATGGGTTaGCAGGCTTGCCTGAGATTG +
Preference number: 5 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVRVRMG*QACLRL
Trigger: CAATCTCAGGCAAGCCTGCAAACCCATCCTGACTCT...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS TCA 90 bp ATTCATATCCATCTTTTGTACACTCAGAGTAAACAAAGCATAGACTaGGGGGTACAATCCTACTCTAGTCCCTTTCCTCATGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: IHIHLLYTQSKQSID*GVQSYSSPFPHATA
Trigger: AGCTGTTGCATGAGGAAAGGGACTAGAGTAGGATTGTACCCCTCAGTCTATGCTTTGTTTACTCTGAGTGTACAAAAGATGGATATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621781.4
ENST00000630477.1
CDS-3UTR CAA 90 bp CTCAGGAATCTAGCTAAAAGCTCAAACCTATGCATATTCATGGTGGTGTTGGAGAAGAGGAGCACAGAATaGGATAAAGTAGGGTTTATC +
Preference number: 5 (lower is better)
Translates to: LRNLAKSSNLCIFMVVLEKRSTE*DKVGFI
Trigger: GATAAACCCTACTTTATCCAATTCTGTGCTCCTCTT...CTCCAACACCACCATGAATATGCATAGGTTTGAGCTTTTAGCTAGATTCCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACTATCTAGGAATGAGTaGATTTGGAGCTCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TELDKVGFILVGDQMVLILSRNE*IWSSGK
Trigger: CTTTCCTGAGCTCCAAATCAACTCATTCCTAGATAG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAACTATCTAGGAATGAGTaGATTTGGAGCTCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TPTNVGFSVLTNILWYIELSRNE*IWSSGK
Trigger: CTTTCCTGAGCTCCAAATCAACTCATTCCTAGATAG...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTTCATGGATGCCATTTTaGTCAATGATTCGAACACTG +
Preference number: 5 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVSWMPF*SMIRTL
Trigger: CAGTGTTCGAATCATTGACAAAAATGGCATCCATGA...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAAAGAGGAGCACAGAATaGGATAAAGTAGGGTTTATC +
Preference number: 5 (lower is better)
Translates to: TELDKVGFILVGDQMVLIKRSTE*DKVGFI
Trigger: GATAAACCCTACTTTATCCAATTCTGTGCTCCTCTT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATAATATTCATGGTGGTGTaGGAGGTTGAATCAACTGTA +
Preference number: 5 (lower is better)
Translates to: TELDKVGFILVGDQMVLIIFMVV*EVESTV
Trigger: TACAGTTGATTCAACCTCCAACACCACCATGAATAT...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp ACAGAATTGGATAAAGTAGGGTTTATCTTAGTCGGAGACCAAATGGTTTTGATACACAAAACATCCACATaGTTCCCTAAAGTTATGCTA +
Preference number: 5 (lower is better)
Translates to: TELDKVGFILVGDQMVLIHKTST*FPKVML
Trigger: TAGCATAACTTTAGGGAACAATGTGGATGTTTTGTG...TATCAAAACCATTTGGTCTCCGACTAAGATAAACCCTACTTTATCCAATTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp AATCTGAATAAAGCCTGGAGCTTAGTAATACTAATACACCAACCAATGTTGGTTGTGCTATTTCAGTCATaGTACAGATGGGAAAATCAT +
Preference number: 5 (lower is better)
Translates to: NLNKAWSLVILIHQPMLVVLFQS*YRWENH
Trigger: ATGATTTTCCCATCTGTACAATGACTGAAATAGCAC...AACCAACATTGGTTGGTGTATTAGTATTACTAAGCTCCAGGCTTTATTCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS-3UTR CAA 90 bp ACACCAACCAATGTTGGTTTCTCAGTTTTGACAAACATACTGTGGTATATAGAAGTGCTATTTCAGTCATaGTACAGATGGGAAAATCAT +
Preference number: 5 (lower is better)
Translates to: TPTNVGFSVLTNILWYIEVLFQS*YRWENH
Trigger: ATGATTTTCCCATCTGTACAATGACTGAAATAGCAC...TTCTATATACCACAGTATGTTTGTCAAAACTGAGAAACCAACATTGGTTGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373237.4
ENST00000621781.4
CDS CAA 90 bp GCTGGCGGCCACCCGGTCGGAGGCGACAAGAACATAGTCGGGGCCTaGGATACCGATGAGGTACTCCATGGTGGCGGAAGGCCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: AGGHPVGGDKNIVGA*DTDEVLHGGGRPGA
Trigger: AGCCCCTGGCCTTCCGCCACCATGGAGTACCTCATCGGTATCCAAGGCCCCGACTATGTTCTTGTCGCCTCCGACCGGGTGGCCGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS TCA 72 bp AGGCGACAAGAACATAGTCGGGGCCTTGGATACCGATaGGGTACTCCATGGTGGCGGAAGGCCAGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RRQEHSRGLGYR*GTPWWRKARGC
Trigger: GCAGCCCCTGGCCTTCCGCCACCATGGAGTACCTCATCGGTATCCAAGGCCCCGACTATGTTCTTGTCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS CAA 72 bp CACCCGGTCGGAGGCGACAAGAACATAGTCGGGGCCTaGGATACCGATGAGGTACTCCATGGTGGCGGAAGG +
Preference number: 6 (lower is better)
Translates to: HPVGGDKNIVGA*DTDEVLHGGGR
Trigger: CCTTCCGCCACCATGGAGTACCTCATCGGTATCCAAGGCCCCGACTATGTTCTTGTCGCCTCCGACCGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS GCA 72 bp ATAGCCGTGGGCTGCAAAAGGGGCCTTGGCCAAGGCTaGCAGGTAGTCCATGTAATACAGCGCTGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: IAVGCKRGLGQG*QVVHVIQRWPF
Trigger: GAAGGGCCAGCGCTGTATTACATGGACTACCTGGCAGCCTTGGCCAAGGCCCCTTTTGCAGCCCACGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373237.4
ENST00000621781.4
ENST00000630477.1
CDS CCA 72 bp GGAAGGCACCATAGCCGTGGGCTGCAAAAGGGGCCTTaGCCAAGGCTGCCAGGTAGTCCATGTAATACAGCG +
Preference number: 6 (lower is better)
Translates to: GRHHSRGLQKGP*PRLPGSPCNTA
Trigger: CGCTGTATTACATGGACTACCTGGCAGCCTTGGCCAAGGCCCCTTTTGCAGCCCACGGCTATGGTGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373237.4
ENST00000621781.4
ENST00000630477.1
CDS CCA 72 bp GGCCAAGGCTGCCAGGTAGTCCATGTAATACAGCGCTaGCCCTTCATGCTCATCATAGCCAGCCAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GQGCQVVHVIQR*PFMLIIASQEE
Trigger: CTCCTCCTGGCTGGCTATGATGAGCATGAAGGGCCAGCGCTGTATTACATGGACTACCTGGCAGCCTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373237.4
ENST00000621781.4
ENST00000630477.1
CDS GCA 72 bp ACATCTTGTCATGATCGTCCTTCATCTGGACAATATTaGTGGCGGCCACCCGGTCGGAGGCGACAAGAACAT +
Preference number: 6 (lower is better)
Translates to: TSCHDRPSSGQY*WRPPGRRRQEH
Trigger: ATGTTCTTGTCGCCTCCGACCGGGTGGCCGCCAGCAATATTGTCCAGATGAAGGACGATCATGACAAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS CCA 72 bp TCTTGTCATGATCGTCCTTCATCTGGACAATATTGCTaGCGGCCACCCGGTCGGAGGCGACAAGAACATAGT +
Preference number: 6 (lower is better)
Translates to: SCHDRPSSGQYC*RPPGRRRQEHS
Trigger: ACTATGTTCTTGTCGCCTCCGACCGGGTGGCCGCCAGCAATATTGTCCAGATGAAGGACGATCATGACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS GCA 72 bp ACAGTCAGCCAGGTTTCGGCGTGTGAAGTTAGCTGCTaGCGTGGGAGACAATTCATATCCATTTCGCATCTT +
Preference number: 6 (lower is better)
Translates to: TVSQVSACEVSC*RGRQFISISHL
Trigger: AAGATGCGAAATGGATATGAATTGTCTCCCACGGCAGCAGCTAACTTCACACGCCGAAACCTGGCTGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS GCA 72 bp AAGACAGTCAGCCAGGTTTCGGCGTGTGAAGTTAGCTaGTGCCGTGGGAGACAATTCATATCCATTTCGCAT +
Preference number: 6 (lower is better)
Translates to: KTVSQVSACEVS*CRGRQFISISH
Trigger: ATGCGAAATGGATATGAATTGTCTCCCACGGCAGCAGCTAACTTCACACGCCGAAACCTGGCTGACTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373237.4
CDS GCA 72 bp ACAGTCAGCCAGGTTTCGGCGTGTGAAGTTAGCTGCTaGCGTGGGAGACAATTCATATCCATCTTTTGTACA +
Preference number: 6 (lower is better)
Translates to: TVSQVSACEVSC*RGRQFISIFCT
Trigger: TGTACAAAAGATGGATATGAATTGTCTCCCACGGCAGCAGCTAACTTCACACGCCGAAACCTGGCTGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621781.4
ENST00000630477.1
CDS GCA 72 bp AAGACAGTCAGCCAGGTTTCGGCGTGTGAAGTTAGCTaGTGCCGTGGGAGACAATTCATATCCATCTTTTGT +
Preference number: 6 (lower is better)
Translates to: KTVSQVSACEVS*CRGRQFISIFC
Trigger: ACAAAAGATGGATATGAATTGTCTCCCACGGCAGCAGCTAACTTCACACGCCGAAACCTGGCTGACTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621781.4
ENST00000630477.1
CDS CCA 72 bp GATGCCATTTTTGTCAATGATTCGAACACTGAAGGTTaGCAGATTCAGGATGAAGCGTTTCTGGAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: DAIFVNDSNTEG*QIQDEAFLELL
Trigger: GAGGAGCTCCAGAAACGCTTCATCCTGAATCTGCCAACCTTCAGTGTTCGAATCATTGACAAAAATGGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373237.4
ENST00000621781.4
ENST00000630477.1
CDS CCA 72 bp GAGCCCTGTTTGGGGAAGGAAATGTTATCCAGGTCATaGATGCCATTTTTGTCAATGATTCGAACACTGAAG +
Preference number: 6 (lower is better)
Translates to: EPCLGKEMLSRS*MPFLSMIRTLK
Trigger: CTTCAGTGTTCGAATCATTGACAAAAATGGCATCCATGACCTGGATAACATTTCCTTCCCCAAACAGGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373237.4
ENST00000621781.4
ENST00000630477.1
CDS GCA 72 bp CATCTTATAAAGTTGCACGTTTTTCTGAATATATTCTaGAAACTGTACAGTGTCTCCAGCCTCTCCAACACA +
Preference number: 6 (lower is better)
Translates to: HLIKLHVFLNIF*KLYSVSSLSNT
Trigger: TGTGTTGGAGAGGCTGGAGACACTGTACAGTTTGCAGAATATATTCAGAAAAACGTGCAACTTTATAAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373237.4