Pregenerated sensors for PSMB10 (Homo sapiens)
Ensembl gene IDs: ENSG00000205220Ensembl transcript IDs: ENST00000358514.9, ENST00000570304.1, ENST00000570985.1, ENST00000574576.2, ENST00000575556.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCTTCACTGTCTGGCCAAGATCCCGGCGGTaGCGGCTTCCACCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: IACTVSSTSSRVSGFTVWPRSRR*RLPPAA Trigger: GGCTGCTGGTGGAAGCCGTCACCGCCGGGATCTTGG...CCAGACAGTGAAGCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR TCA 90 bp | ACCTCCATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCTTCACTCGTGGCCCTGGTACCTaGAGAGCGTCTGGCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TSIACTVSSTSSRVSGFTRGPGT*RASGAG Trigger: TCCTGCGCCAGACGCTCTTCAGGTACCAGGGCCACG...AGTGAAGCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTATGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR TCA 90 bp | ACCTCCATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCTTCACTCACGGGCTCTGTGGGTaGGCTCAGTGTCCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TSIACTVSSTSSRVSGFTHGLCG*AQCPQQ Trigger: CTGCTGCGGACACTGAGCTCACCCACAGAGCCCGTG...AGTGAAGCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTATGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR GCA 90 bp | TACTCCACCTCCATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCGCCCACGATCAGCGATaGACCCACGTGGCCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: YSTSIACTVSSTSSRVSGAHDQR*THVALV Trigger: TACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGC...GCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTATGGAGGTGGAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR GCA 90 bp | TACTCCACCTCCATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCCACATGCGTCCACATTaGCCCCGGAGCCCAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: YSTSIACTVSSTSSRVSGHMRPH*PRSPGH Trigger: GTGACCTGGGCTCCGGGGGCAATGTGGACGCATGTG...GCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTATGGAGGTGGAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR CCA 90 bp | GTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCATAGCGGTAGCGGCCAGACCTaGGAGGGAGGAGGGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: VYSPLFQALSLSLLHLHSGSGQT*EGGGTA Trigger: GGCTGTCCCTCCTCCCTCCCAGGTCTGGCCGCTACC...GCTATGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR TCA 90 bp | TGGGTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCATCAGAGCCCAGGGCTGTaGAGGGCAGACGGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: WVYSPLFQALSLSLLHLHQSPGL*RADGCR Trigger: CCTACAGCCGTCTGCCCTTCACAGCCCTGGGCTCTG...ATGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR TCA 90 bp | TGGGTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCATTCCACCAGCAGCCCCTaGGCAGCCTCCAGCGTCATG | + |
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Preference number: 4 (lower is better) Translates to: WVYSPLFQALSLSLLHLHSTSSP*AASSVM Trigger: CATGACGCTGGAGGCTGCTCAGGGGCTGCTGGTGGA...ATGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR CCA 90 bp | GTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCATAGCGCACCCACGTGGCCCTaGTACCTGAAGAGCGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VYSPLFQALSLSLLHLHSAPTWP*YLKSVW Trigger: CCAGACGCTCTTCAGGTACCAGGGCCACGTGGGTGC...GCTATGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR CCA 90 bp | CTGGGTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCAAGCGATGCACCCACGTaGCCCTGGTACCTGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LGLFPLVPSSKPQLTPPPSDAPT*PWYLKS Trigger: GCTCTTCAGGTACCAGGGCCACGTGGGTGCATCGCT...TGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR TCA 90 bp | TACTCCACCTCCATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCTGGCGCCAGTCTTTGTaGTCACACATGCGTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: YSTSIACTVSSTSSRVSGWRQSL*SHMRPH Trigger: ATGTGGACGCATGTGTGATCACAAAGACTGGCGCCA...GCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTATGGAGGTGGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR CCA 90 bp | ATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCTTCACTGTCTGGAGCGTCATGTTCGGCTaGAACCGGTCTTCTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: IACTVSSTSSRVSGFTVWSVMFG*NRSSST Trigger: GGTGCTAGAAGACCGGTTCCAGCCGAACATGACGCT...CCAGACAGTGAAGCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR GCA 90 bp | ACCTCCATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCTTCACTTCCACCTCCATAGCCTaGACAGTTTCCTCCACTAGC | + |
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Preference number: 4 (lower is better) Translates to: TSIACTVSSTSSRVSGFTSTSIA*TVSSTS Trigger: GCTAGTGGAGGAAACTGTGCAGGCTATGGAGGTGGA...AGTGAAGCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTATGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR CCA 90 bp | GTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCATAGCTCTTCACGGGCTCTGTaGGTGAGCTCAGTGTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: VYSPLFQALSLSLLHLHSSSRAL*VSSVSA Trigger: TGCGGACACTGAGCTCACCCACAGAGCCCGTGAAGA...GCTATGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR CCA 90 bp | CTGGGTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCAAGTGGCTTCACTGTCTaGGTCAGGACAGCTGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LGLFPLVPSSKPQLTPPPSGFTV*VRTAVV Trigger: AACCACAGCTGTCCTGACCCAGACAGTGAAGCCACT...TGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAACCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR GCA 90 bp | TGGGTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCATCTTTGTGATCACACATaGGTCCACATTGCCCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: WVYSPLFQALSLSLLHLHLCDHT*VHIAPG Trigger: TCCGGGGGCAATGTGGACGCATGTGTGATCACAAAG...ATGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS GCA 90 bp | GCCACCCGCACTGGGCCAGGGTCCTGTGCTCCCCCAGCTCCCGGGTaGACATCCCACCAGCGACCACAAAGTCGGGGACAGAGGCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: ATRTGPGSCAPPAPG*TSHQRPQSRGQRPL Trigger: GAGCGGCCTCTGTCCCCGACTTTGTGGTCGCTGGTGGGATGTGCACCCGGGAGCTGGGGGAGCACAGGACCCTGGCCCAGTGCGGGTGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570304.1 |
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| CDS GCA 90 bp | CTACGCCGCCCACGATCAGCGATGCACCCACGTGGCCCTGGTACCTaGTCGAGGATGGGCGGGGTCGGCCACAAGCTGGGGCCTAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LRRPRSAMHPRGPGT*SRMGGVGHKLGPRP Trigger: GGGCCTAGGCCCCAGCTTGTGGCCGACCCCGCCCATCCTCGAGCAGGTACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGCGGCGTAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570985.1 |
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| CDS CCA 90 bp | GTCAGGTCTACGCCGCCCACGATCAGCGATGCACCCACGTGGCCCTaGTACCTGCTCGAGGATGGGCGGGGTCGGCCACAAGCTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: VRSTPPTISDAPTWP*YLLEDGRGRPQAGA Trigger: GGCCCCAGCTTGTGGCCGACCCCGCCCATCCTCGAGCAGGTACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGCGGCGTAGACCTGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570985.1 |
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| CDS TCA 90 bp | GTGTGGTCATCTCGGCGTCCGCGGCTACTCCAGCCCCACAGCAGCTaGGGCAAAAGGGAGGATCGGTGTGGGCAGGGCTGGGACGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: VWSSRRPRLLQPHSS*GKREDRCGQGWDVR Trigger: CCGCACGTCCCAGCCCTGCCCACACCGATCCTCCCTTTTGCCTCAGCTGCTGTGGGGCTGGAGTAGCCGCGGACGCCGAGATGACCACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575556.1 |
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| CDS CCA 90 bp | GGTCCAGTCAGGTCTACGCCGCCCACGATCAGCGATGCACCCACGTaGCCCTGGTACCTGCTCGAGGATGGGCGGGGTCGGCCACAAGCT | + |
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Preference number: 5 (lower is better) Translates to: GPVRSTPPTISDAPT*PWYLLEDGRGRPQA Trigger: AGCTTGTGGCCGACCCCGCCCATCCTCGAGCAGGTACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGCGGCGTAGACCTGACTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570985.1 |
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| CDS TCA 90 bp | CCAGGCCCGCGATGGTGGTCCCGGTCTTGCGTGCGTGAGGGACCTTaGGCCCCGGGAGGACGCGTTCCAATGATGCATTTCTGGAAACGG | + |
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Preference number: 5 (lower is better) Translates to: PGPRWWSRSCVREGP*APGGRVPMMHFWKR Trigger: CCGTTTCCAGAAATGCATCATTGGAACGCGTCCTCCCGGGGCTCAAGGTCCCTCACGCACGCAAGACCGGGACCACCATCGCGGGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575556.1 |
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| CDS TCA 90 bp | CCAGGCCCGCGATGGTGGTCCCGGTCTTGCGTGCGTGAGGGACCTTaGGCCCCGGGAGGACGCGTTCCAATGATGCATTTCTTTGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: PGPRWWSRSCVREGP*APGGRVPMMHFFGS Trigger: ACTGCCAAAGAAATGCATCATTGGAACGCGTCCTCCCGGGGCTCAAGGTCCCTCACGCACGCAAGACCGGGACCACCATCGCGGGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358514.9 ENST00000570304.1 |
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| CDS TCA 90 bp | TCTTGGAACACCAGGCCCGCGATGGTGGTCCCGGTCTTGCGTGCGTaGGGGACCTTGAGCCCCGGGAGGACGCGTTCCAATGATGCATTT | + |
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Preference number: 5 (lower is better) Translates to: SWNTRPAMVVPVLRA*GTLSPGRTRSNDAF Trigger: AAATGCATCATTGGAACGCGTCCTCCCGGGGCTCAAGGTCCCTCACGCACGCAAGACCGGGACCACCATCGCGGGCCTGGTGTTCCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000575556.1 |
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| CDS TCA 90 bp | CTGTGGGTGAGCTCAGTGTCCGCAGCAGCTTGGCGCCAGTCTTTGTaGTCACACATGCGTCCACATTGCCCCCGGAGCCCAGGTCACCCA | + |
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Preference number: 5 (lower is better) Translates to: LWVSSVSAAAWRQSL*SHMRPHCPRSPGHP Trigger: TGGGTGACCTGGGCTCCGGGGGCAATGTGGACGCATGTGTGATCACAAAGACTGGCGCCAAGCTGCTGCGGACACTGAGCTCACCCACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570985.1 ENST00000574576.2 |
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| CDS TCA 90 bp | GGGCAGAGTTCGAGGAGAAGGGACAGAAGCGCTCACCCAGGGCTGTaGAGGGCAGACGGCTGTAGGAGCCATGGGGATGCACACCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: GQSSRRRDRSAHPGL*RADGCRSHGDAHRR Trigger: TCTACGGTGTGCATCCCCATGGCTCCTACAGCCGTCTGCCCTTCACAGCCCTGGGTGAGCGCTTCTGTCCCTTCTCCTCGAACTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570304.1 |
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| CDS CCA 90 bp | CTAGCTCCAGGGTTAGTGGCTTCACTGTCTGGGTCAGGACAGCTGTaGTTCCAGGCACAAAGTGGTAGCGGCCAGACCTGGGAGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LAPGLVASLSGSGQL*FQAQSGSGQTWEGG Trigger: TCCTCCCTCCCAGGTCTGGCCGCTACCACTTTGTGCCTGGAACCACAGCTGTCCTGACCCAGACAGTGAAGCCACTAACCCTGGAGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS CCA 90 bp | CTAGCTCCAGGGTTAGTGGCTTCACTGTCTGGGTCAGGACAGCTGTaGTTCCAGGCACAAAGTGGTAGCGGCCAGACCTCTTCACGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LAPGLVASLSGSGQL*FQAQSGSGQTSSRA Trigger: AGCCCGTGAAGAGGTCTGGCCGCTACCACTTTGTGCCTGGAACCACAGCTGTCCTGACCCAGACAGTGAAGCCACTAACCCTGGAGCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358514.9 ENST00000570985.1 |
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| CDS TCA 90 bp | CGTACGGGAACTGGGCTCGGGAGTCTCACTAGATTTTGGGGGCGATaGAGTGGATCTTCTCGCAGCTCTTGTCCGCCACGACCGAATCGT | + |
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Preference number: 5 (lower is better) Translates to: RTGTGLGSLTRFWGR*SGSSRSSCPPRPNR Trigger: ACGATTCGGTCGTGGCGGACAAGAGCTGCGAGAAGATCCACTTCATCGCCCCCAAAATCTAGTGAGACTCCCGAGCCCAGTTCCCGTACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575556.1 |
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| CDS-3UTR CAA 90 bp | GTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCATAGCACACATGCGTCCACATaGCCCCCGGAGCCCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VYSPLFQALSLSLLHLHSTHAST*PPEPRS Trigger: TGACCTGGGCTCCGGGGGCAATGTGGACGCATGTGT...GCTATGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR CAA 90 bp | ATAGCCTGCACAGTTTCCTCCACTAGCTCCAGGGTTAGTGGCTTCACTGTCTGGAGTGTCCGCAGCAGCTaGGCGCCAGTCTTTGTGATC | + |
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Preference number: 5 (lower is better) Translates to: IACTVSSTSSRVSGFTVWSVRSS*APVFVI Trigger: GATCACAAAGACTGGCGCCAAGCTGCTGCGGACACT...CCAGACAGTGAAGCCACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS-3UTR CAA 90 bp | TGGGTTTATTCCCCCTTGTTCCAAGCTCTAAGCCTCAGCTTACTCCACCTCCATTGGGTTTATTCCCCCTaGTTCCAAGCTCTAAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: WVYSPLFQALSLSLLHLHWVYSP*FQALSL Trigger: GAGGCTTAGAGCTTGGAACAAGGGGGAATAAACCCA...ATGGAGGTGGAGTAAGCTGAGGCTTAGAGCTTGGAACAAGGGGGAATAAACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS GCA 72 bp | GAACACCAGGCCCGCGATGGTGGTCCCGGTCTTGCGTaGGTGAGGGACCTTGAGCCCCGGGAGGACGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: EHQARDGGPGLA*VRDLEPREDAF Trigger: GAACGCGTCCTCCCGGGGCTCAAGGTCCCTCACGCACGCAAGACCGGGACCACCATCGCGGGCCTGGTGTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000575556.1 |
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| CDS CCA 72 bp | ACGCCGCCCACGATCAGCGATGCACCCACGTGGCCCTaGTACCTGCTCGAGGATGGGCGGGGTCGGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: TPPTISDAPTWP*YLLEDGRGRPQ Trigger: TTGTGGCCGACCCCGCCCATCCTCGAGCAGGTACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGCGGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570985.1 |
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| CDS CCA 72 bp | AGGTCTACGCCGCCCACGATCAGCGATGCACCCACGTaGCCCTGGTACCTGCTCGAGGATGGGCGGGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RSTPPTISDAPT*PWYLLEDGRGR Trigger: CCGACCCCGCCCATCCTCGAGCAGGTACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGCGGCGTAGACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570985.1 |
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| CDS TCA 72 bp | ACCAGGCCCGCGATGGTGGTCCCGGTCTTGCGTGCGTaGGGGACCTTGAGCCCCGGGAGGACGCGTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: TRPAMVVPVLRA*GTLSPGRTRSN Trigger: ATTGGAACGCGTCCTCCCGGGGCTCAAGGTCCCTCACGCACGCAAGACCGGGACCACCATCGCGGGCCTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000575556.1 |
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| CDS TCA 72 bp | TCTCGGCGTCCGCGGCTACTCCAGCCCCACAGCAGCTaGGGCAAAAGGGAGGATCGGTGTGGGCAGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRRPRLLQPHSS*GKREDRCGQGW Trigger: CCAGCCCTGCCCACACCGATCCTCCCTTTTGCCTCAGCTGCTGTGGGGCTGGAGTAGCCGCGGACGCCGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575556.1 |
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| CDS CCA 72 bp | AGTCGGGGACAGAGGCCGCTCACCGTCATGTTCGGCTaGAACCGGTCTTCTAGCACCGCCAGGGCCGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRGQRPLTVMFG*NRSSSTARAAS Trigger: GGACGCGGCCCTGGCGGTGCTAGAAGACCGGTTCCAGCCGAACATGACGGTGAGCGGCCTCTGTCCCCGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570304.1 |
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| CDS CAA 90 bp | GCCACGCGGGGCTCGCGGCCCGTAGATAACGCGTGTAGCTCCATCTaGGACGCCACCATCCGTGTGGTCATCTCGGCGTCCGCGGCTACT | + |
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Preference number: 6 (lower is better) Translates to: ATRGSRPVDNACSSI*DATIRVVISASAAT Trigger: AGTAGCCGCGGACGCCGAGATGACCACACGGATGGTGGCGTCCAAGATGGAGCTACACGCGTTATCTACGGGCCGCGAGCCCCGCGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000575556.1 |
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| CDS TCA 72 bp | AAGATCCCGGCGGTGACGGCTTCCACCAGCAGCCCCTaGGCAGCCTCCAGCGTCATGTTCGGCTGGAACCGG | + |
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Preference number: 6 (lower is better) Translates to: KIPAVTASTSSP*AASSVMFGWNR Trigger: CCGGTTCCAGCCGAACATGACGCTGGAGGCTGCTCAGGGGCTGCTGGTGGAAGCCGTCACCGCCGGGATCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570985.1 ENST00000574576.2 |
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| CDS GCA 72 bp | CGGTCCAGTCAGGTCTACGCCGCCCACGATCAGCGATaGACCCACGTGGCCCTGGTACCTGCTCGAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RSSQVYAAHDQR*THVALVPARGW Trigger: CCATCCTCGAGCAGGTACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGCGGCGTAGACCTGACTGGACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570985.1 |
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| CDS GCA 72 bp | CGGTCCAGTCAGGTCTACGCCGCCCACGATCAGCGATaGACCCACGTGGCCCTGGTACCTGAAGAGCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: RSSQVYAAHDQR*THVALVPEERL Trigger: CAGACGCTCTTCAGGTACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGCGGCGTAGACCTGACTGGACCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000574576.2 ENST00000575556.1 |
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| CDS CCA 72 bp | ACGCGTGTAGCTCCATCTTGGACGCCACCATCCGTGTaGTCATCTCGGCGTCCGCGGCTACTCCAGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: TRVAPSWTPPSV*SSRRPRLLQPH Trigger: GTGGGGCTGGAGTAGCCGCGGACGCCGAGATGACCACACGGATGGTGGCGTCCAAGATGGAGCTACACGCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000575556.1 |
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| CDS CAA 90 bp | CGCAGCAGCTTGGCGCCAGTCTTTGTGATCACACATGCGTCCACATaGCCCCCGGAGCCCAGGTCACCCAAGATCCCGGCGGTGACGGCT | + |
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Preference number: 6 (lower is better) Translates to: RSSLAPVFVITHAST*PPEPRSPKIPAVTA Trigger: AGCCGTCACCGCCGGGATCTTGGGTGACCTGGGCTCCGGGGGCAATGTGGACGCATGTGTGATCACAAAGACTGGCGCCAAGCTGCTGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570985.1 ENST00000574576.2 |
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| CDS CCA 72 bp | CAAAGTGGTAGCGGCCAGACCTCTTCACGGGCTCTGTaGGTGAGCTCAGTGTCCGCAGCAGCTTGGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: QSGSGQTSSRAL*VSSVSAAAWRQ Trigger: CTGGCGCCAAGCTGCTGCGGACACTGAGCTCACCCACAGAGCCCGTGAAGAGGTCTGGCCGCTACCACTTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358514.9 ENST00000570985.1 |
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| CDS CAA 72 bp | GGCTCGCGGCCCGTAGATAACGCGTGTAGCTCCATCTaGGACGCCACCATCCGTGTGGTCATCTCGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GSRPVDNACSSI*DATIRVVISAS Trigger: GGACGCCGAGATGACCACACGGATGGTGGCGTCCAAGATGGAGCTACACGCGTTATCTACGGGCCGCGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000575556.1 |
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| CDS TCA 72 bp | CGCGGGCGGATGAGTCGGCCAGACAAGCGGGGCCAGTaGGCAGCTAAAAAGTCCTCTGCTAGGCTTCACGTC | + |
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Preference number: 6 (lower is better) Translates to: RGRMSRPDKRGQ*AAKKSSARLHV Trigger: GACGTGAAGCCTAGCAGAGGACTTTTTAGCTGCTCACTGGCCCCGCTTGTCTGGCCGACTCATCCGCCCGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358514.9 ENST00000575556.1 |
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| CDS TCA 72 bp | CGATGGTGGTCCCGGTCTTGCGTGCGTGAGGGACCTTaGGCCCCGGGAGGACGCGTTCCAATGATGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: RWWSRSCVREGP*APGGRVPMMHF Trigger: GAAATGCATCATTGGAACGCGTCCTCCCGGGGCTCAAGGTCCCTCACGCACGCAAGACCGGGACCACCATCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000575556.1 |
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| CDS CAA 72 bp | TTGGCGCCAGTCTTTGTGATCACACATGCGTCCACATaGCCCCCGGAGCCCAGGTCACCCAAGATCCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LAPVFVITHAST*PPEPRSPKIPA Trigger: CGCCGGGATCTTGGGTGACCTGGGCTCCGGGGGCAATGTGGACGCATGTGTGATCACAAAGACTGGCGCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570985.1 ENST00000574576.2 |
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| CDS CAA 90 bp | GACCTCTTCACGGGCTCTGTGGGTGAGCTCAGTGTCCGCAGCAGCTaGGCGCCAGTCTTTGTGATCACACATGCGTCCACATTGCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: DLFTGSVGELSVRSS*APVFVITHASTLPP Trigger: CGGGGGCAATGTGGACGCATGTGTGATCACAAAGACTGGCGCCAAGCTGCTGCGGACACTGAGCTCACCCACAGAGCCCGTGAAGAGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358514.9 ENST00000570985.1 |
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| CDS CAA 90 bp | CCTCTCTTCACGGGCTCTGTGGGTGAGCTCAGTGTCCGCAGCAGCTaGGCGCCAGTCTTTGTGATCACACATGCGTCCACATTGCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: PLFTGSVGELSVRSS*APVFVITHASTLPP Trigger: CGGGGGCAATGTGGACGCATGTGTGATCACAAAGACTGGCGCCAAGCTGCTGCGGACACTGAGCTCACCCACAGAGCCCGTGAAGAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS TCA 72 bp | AGCTCAGTGTCCGCAGCAGCTTGGCGCCAGTCTTTGTaGTCACACATGCGTCCACATTGCCCCCGGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSVSAAAWRQSL*SHMRPHCPRSP Trigger: TGGGCTCCGGGGGCAATGTGGACGCATGTGTGATCACAAAGACTGGCGCCAAGCTGCTGCGGACACTGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570985.1 ENST00000574576.2 |
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| CDS CCA 72 bp | GGAGAAGCATCTGAAGTCAACCGCTGCGACGCCGTTTaGAGTGAGGCCAAGGTCACAGGGGCAGAGTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: GEASEVNRCDAV*SEAKVTGAEFE Trigger: CTCGAACTCTGCCCCTGTGACCTTGGCCTCACTCCAAACGGCGTCGCAGCGGTTGACTTCAGATGCTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570304.1 |
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| CDS CCA 72 bp | GGGTTAGTGGCTTCACTGTCTGGGTCAGGACAGCTGTaGTTCCAGGCACAAAGTGGTAGCGGCCAGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: GLVASLSGSGQL*FQAQSGSGQTW Trigger: CCAGGTCTGGCCGCTACCACTTTGTGCCTGGAACCACAGCTGTCCTGACCCAGACAGTGAAGCCACTAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574576.2 |
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| CDS CAA 72 bp | ACGGGCTCTGTGGGTGAGCTCAGTGTCCGCAGCAGCTaGGCGCCAGTCTTTGTGATCACACATGCGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: TGSVGELSVRSS*APVFVITHAST Trigger: TGTGGACGCATGTGTGATCACAAAGACTGGCGCCAAGCTGCTGCGGACACTGAGCTCACCCACAGAGCCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570985.1 ENST00000574576.2 |
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| CDS CCA 72 bp | GGGTTAGTGGCTTCACTGTCTGGGTCAGGACAGCTGTaGTTCCAGGCACAAAGTGGTAGCGGCCAGACCTCT | + |
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Preference number: 6 (lower is better) Translates to: GLVASLSGSGQL*FQAQSGSGQTS Trigger: AGAGGTCTGGCCGCTACCACTTTGTGCCTGGAACCACAGCTGTCCTGACCCAGACAGTGAAGCCACTAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358514.9 ENST00000570985.1 |
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| CDS TCA 72 bp | ACTGGGCTCGGGAGTCTCACTAGATTTTGGGGGCGATaGAGTGGATCTTCTCGCAGCTCTTGTCCGCCACGA | + |
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Preference number: 6 (lower is better) Translates to: TGLGSLTRFWGR*SGSSRSSCPPR Trigger: TCGTGGCGGACAAGAGCTGCGAGAAGATCCACTTCATCGCCCCCAAAATCTAGTGAGACTCCCGAGCCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575556.1 |
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| CDS CCA 72 bp | TCCTCCACTAGCTCCAGGGTTAGTGGCTTCACTGTCTaGGTCAGGACAGCTGTGGTTCCAGGCACAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSTSSRVSGFTV*VRTAVVPGTKW Trigger: CCACTTTGTGCCTGGAACCACAGCTGTCCTGACCCAGACAGTGAAGCCACTAACCCTGGAGCTAGTGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570985.1 ENST00000574576.2 |
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| CDS CAA 72 bp | ATTTTGGGGGCGATGAAGTGGATCTTCTCGCAGCTCTaGTCCGCCACGACCGAATCGTTAGTGGCTCGCGTA | + |
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Preference number: 6 (lower is better) Translates to: ILGAMKWIFSQL*SATTESLVARV Trigger: TACGCGAGCCACTAACGATTCGGTCGTGGCGGACAAGAGCTGCGAGAAGATCCACTTCATCGCCCCCAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000358514.9 ENST00000570304.1 ENST00000575556.1 |
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