Pregenerated sensors for PSMB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000008018Ensembl transcript IDs: ENST00000262193.7, ENST00000462957.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCACATCGCACGGCTGCGCCTaGGGATCCGACACTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QFQSTKSTRSELIGDKSTSHGCA*GSDTCC Trigger: ACAGCAAGTGTCGGATCCGCAGGCGCAGCCGTGCGA...TGTGCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | AAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGGCCCGCGGCTCTGTaGGGTTCCATCCCCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: KPSKVQFQSTKSTRSELIGPAAL*GSIPKS Trigger: AGACTTGGGGATGGAACCGCACAGAGCCGCGGGCCC...AATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | ACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGGGCGAAAATCGCAGCTaGAAAGGGCCCGCGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TKPSKVQFQSTKSTRSELGENRS*KGPAAL Trigger: CAGAGCCGCGGGCCCTTTGCAGCTGCGATTTTCGCC...CAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR CCA 90 bp | TTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCACACAGGCAGGGGCTGTAGCATaGCACTTGCTGAGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FQSTKSTRSELIGDKSTQAGAVA*HLLSLQ Trigger: CTGGAGGCTCAGCAAGTGCCATGCTACAGCCCCTGC...CTGTGTGCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | GTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCTGCGGATCCGACACTTaGTGTCTCACGGCGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: VQFQSTKSTRSELIGDKSCGSDT*CLTARW Trigger: CCATCTCGCCGTGAGACAGCAAGTGTCGGATCCGCA...GCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | AAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTACAACATCGCACGGCTaGGCCTGCGGATCCGACACT | + |
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Preference number: 4 (lower is better) Translates to: KPSKVQFQSTKSTRSELITTSHG*ACGSDT Trigger: AGTGTCGGATCCGCAGGCGCAGCCGTGCGATGTTGT...AATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR CCA 90 bp | ACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGCTTTCACCAGCCGCATaGCTCTGTCCAAGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: TKPSKVQFQSTKSTRSELLSPAA*LCPRTA Trigger: CGCTGTCCTTGGACAGAGCCATGCGGCTGGTGAAAG...CAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | GTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCCCATCCCCAAGTCTCTaGCAGGAGCCGAATACATGG | + |
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Preference number: 4 (lower is better) Translates to: VQFQSTKSTRSELIGDKSPSPSL*QEPNTW Trigger: CCATGTATTCGGCTCCTGGCAGAGACTTGGGGATGG...GCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | GTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCCCTCTTTGGTCACTATaGAGATCCGGAGTGCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VQFQSTKSTRSELIGDKSPLWSL*RSGVRP Trigger: GGGACGCACTCCGGATCTGCATAGTGACCAAAGAGG...GCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | ACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGCAGCATTGCAGCAATTaGCCCCGTAGTCATGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TKPSKVQFQSTKSTRSELQHCSN*PRSHGL Trigger: AAGGCCATGACTACGGGGGCAATTGCTGCAATGCTG...CAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | CAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCACATATGCAGATCCGGAGTaGGTCCCCAGTGTACACATC | + |
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Preference number: 4 (lower is better) Translates to: QFQSTKSTRSELIGDKSTYADPE*VPSVHI Trigger: GATGTGTACACTGGGGACGCACTCCGGATCTGCATA...TGTGCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR TCA 90 bp | TCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATGGGCTATCCCGCGTATaGATTGAAAACCCTTCACTC | + |
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Preference number: 4 (lower is better) Translates to: SKVQFQSTKSTRSELIGDGLSRV*IENPSL Trigger: GAGTGAAGGGTTTTCAATTCATACGCGGGATAGCCC...ATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | CCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTAAGGACAGCGGAACATaGTCCACATTCTGCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: PSKVQFQSTKSTRSELIGKDSGT*STFCMF Trigger: GAACATGCAGAATGTGGAGCATGTTCCGCTGTCCTT...ACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR TCA 90 bp | ACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGGTAAGACAGTCTCCATaGAAACCGCTGCATCCAATG | + |
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Preference number: 4 (lower is better) Translates to: TKPSKVQFQSTKSTRSELVRQSP*KPLHPM Trigger: CATTGGATGCAGCGGTTTTCATGGAGACTGTCTTAC...CAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR TCA 90 bp | TCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATCAACCAGGTCTGAACTaGTTGGTGATAAGAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: SKVQFQSTKSTRSELIGDQPGLN*LVIRAH Trigger: GTGTGCTCTTATCACCAATCAGTTCAGACCTGGTTG...ATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR TCA 90 bp | TCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATATCCCGCGTATGAATTaGAAACCCTTCACTCAATCG | + |
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Preference number: 4 (lower is better) Translates to: SKVQFQSTKSTRSELIGDIPRMN*KPFTQS Trigger: CGATTGAGTGAAGGGTTTTCAATTCATACGCGGGAT...ATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | AAACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACGATTGTAGACAGCATTaGAGCAATTGCCCCCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: KQNHPRYSSKVQNQPGLNDCRQH*SNCPRS Trigger: ACTACGGGGGCAATTGCTGCAATGCTGTCTACAATC...GTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR CCA 90 bp | CAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCACACTGGTAAGACCCTACTaGATCAAAGCTGTATACAGC | + |
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Preference number: 4 (lower is better) Translates to: QFQSTKSTRSELIGDKSTLVRPY*IKAVYS Trigger: GCTGTATACAGCTTTGATCCAGTAGGGTCTTACCAG...TGTGCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR TCA 90 bp | AAACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGGAAAGAAGCGCCTTaGATACAGGATTGTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: KQNHPRYSSKVQNQPGLNWKEAP*IQDCRQ Trigger: CTGTCTACAATCCTGTATTCAAGGCGCTTCTTTCCA...GTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR GCA 90 bp | GTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCATCTTCTCCAGCAATTaGCAGTATAGTACCTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: VQFQSTKSTRSELIGDKSIFSSN*QYSTSV Trigger: AACGGAGGTACTATACTGGCAATTGCTGGAGAAGAT...GCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR CCA 90 bp | AAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGTTCTTAAAACCAACCTaGTTGTCAAGCAGGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KVQFQSTKSTRSELIGDKFLKPT*LSSRGC Trigger: ACAGCCCCTGCTTGACAACCAGGTTGGTTTTAAGAA...CTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR TCA 90 bp | TTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCACACAGAACCGCTGCATCCAATaGCTGTTTTGTCTGTTAATT | + |
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Preference number: 4 (lower is better) Translates to: FQSTKSTRSELIGDKSTQNRCIQ*LFCLLI Trigger: AATTAACAGACAAAACAGTCATTGGATGCAGCGGTT...CTGTGTGCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR TCA 90 bp | AAACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACCATCAAGTCCACCGATaGTGTTGTAAACATAGTATG | + |
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Preference number: 4 (lower is better) Translates to: KQNHPRYSSKVQNQPGLNHQVHR*CCKHSM Trigger: CATACTATGTTTACAACATCATCGGTGGACTTGATG...GTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR CCA 90 bp | GTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCTTAATTTGTAACATTTaGGGCTATCCCGCGTATGAA | + |
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Preference number: 4 (lower is better) Translates to: VQFQSTKSTRSELIGDKSLICNI*GYPAYE Trigger: TTCATACGCGGGATAGCCCCAAATGTTACAAATTAA...GCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS TCA 90 bp | AAGAGCACACAGATCAGTCCTTCCTTAAGGAAACAGTTTCCTCCCTaGTGCCCTCTTTGGTCACTATGCAGATCCGGAGTGCGTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: KSTQISPSLRKQFPP*CPLWSLCRSGVRPQ Trigger: CTGGGGACGCACTCCGGATCTGCATAGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTTCCTTAAGGAAGGACTGATCTGTGTGCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS TCA 90 bp | GGTCCTCTAGTAAGTGTTAGCTATAAGTGCTATGGCACTGGAGTATaGCTAAGCACCTGGGCTCTGGAATTACATGAGACAGAGACCCAC | + |
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Preference number: 5 (lower is better) Translates to: GPLVSVSYKCYGTGV*LSTWALELHETETH Trigger: GTGGGTCTCTGTCTCATGTAATTCCAGAGCCCAGGTGCTTAGTCATACTCCAGTGCCATAGCACTTATAGCTAACACTTACTAGAGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS-3UTR CAA 90 bp | AAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTCTGCGGATCCGACACTaGCTGTCTCACGGCGAGATG | + |
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Preference number: 5 (lower is better) Translates to: KPSKVQFQSTKSTRSELILRIRH*LSHGEM Trigger: CATCTCGCCGTGAGACAGCAAGTGTCGGATCCGCAG...AATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR CAA 90 bp | TTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCACACAGTCCCTGATGCCCTCTTaGGTCACTATGCAGATCCGG | + |
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Preference number: 5 (lower is better) Translates to: FQSTKSTRSELIGDKSTQSLMPS*VTMQIR Trigger: CCGGATCTGCATAGTGACCAAAGAGGGCATCAGGGA...CTGTGTGCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS-3UTR CAA 90 bp | ACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTGTTAAAACCAACCTGGTaGTCAAGCAGGGGCTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: TKPSKVQFQSTKSTRSELLKPTW*SSRGCS Trigger: GCTACAGCCCCTGCTTGACAACCAGGTTGGTTTTAA...CAGTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS TCA 90 bp | CCTCACAGACGTAAGCACTCAGGAAACTTAAGCCACTATTTTTACTaGGGAGGGATTTGTGCTAAAGCTCTCAAGAAGAAAAGGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: PHRRKHSGNLSHYFY*GGICAKALKKKRMA Trigger: TGCCATCCTTTTCTTCTTGAGAGCTTTAGCACAAATCCCTCCTCAGTAAAAATAGTGGCTTAAGTTTCCTGAGTGCTTACGTCTGTGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS CCA 90 bp | CAACTAAATACCACATCTGTGCCCTTGAGGATCAGGTATAGACAGTaGTACTACAACGCAAGCTCTATGAGTTTAGAGAAGATGAGATTT | + |
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Preference number: 5 (lower is better) Translates to: QLNTTSVPLRIRYRQ*YYNASSMSLEKMRF Trigger: AAATCTCATCTTCTCTAAACTCATAGAGCTTGCGTTGTAGTACCACTGTCTATACCTGATCCTCAAGGGCACAGATGTGGTATTTAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS-3UTR CAA 90 bp | TTCCAAAGTACAAAATCAACCAGGTCTGAACTGATTGGTGATAAGAGCACACAGTATCCCGCGTATGAATaGAAAACCCTTCACTCAATC | + |
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Preference number: 5 (lower is better) Translates to: FQSTKSTRSELIGDKSTQYPAYE*KTLHSI Trigger: GATTGAGTGAAGGGTTTTCAATTCATACGCGGGATA...CTGTGTGCTCTTATCACCAATCAGTTCAGACCTGGTTGATTTTGTACTTTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS GCA 90 bp | TCAAATAGTACATACATTCAAGCAACTCATTCAGGCAGCCCTTTTTaGATAAGCACATGTAGTGACGTTAAGGTTTATGTGATGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: SNSTYIQATHSGSPF*ISTCSDVKVYVMDR Trigger: CCTGTCCATCACATAAACCTTAACGTCACTACATGTGCTTATGCAAAAAGGGCTGCCTGAATGAGTTGCTTGAATGTATGTACTATTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS-3UTR CAA 90 bp | AAACAAAACCATCCAAGGTACAGTTCCAAAGTACAAAATCAACCAGGTCTGAACTATCAGAAGCAACAATaGCAAAATCTTCTCCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: KQNHPRYSSKVQNQPGLNYQKQQ*QNLLQQ Trigger: TTGCTGGAGAAGATTTTGCAATTGTTGCTTCTGATA...GTTCAGACCTGGTTGATTTTGTACTTTGGAACTGTACCTTGGATGGTTTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS TCA 90 bp | ATAGATGGACAAACAGTAAATTTTTCCCTCTGTGGCTGTACAATTTaGCAGCTTATCAAAGAGACTTACAGTAGAATTCCAAAAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: IDGQTVNFSLCGCTI*QLIKETYSRIPKAD Trigger: GTCTGCTTTTGGAATTCTACTGTAAGTCTCTTTGATAAGCTGTCAAATTGTACAGCCACAGAGGGAAAAATTTACTGTTTGTCCATCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS CAA 72 bp | GACAACATCGCACGGCTGCGCCTGCGGATCCGACACTaGCTGTCTCACGGCGAGATGGCTGCCTTGACCGGA | + |
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Preference number: 6 (lower is better) Translates to: DNIARLRLRIRH*LSHGEMAALTG Trigger: TCCGGTCAAGGCAGCCATCTCGCCGTGAGACAGCAAGTGTCGGATCCGCAGGCGCAGCCGTGCGATGTTGTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS GCA 72 bp | CCTGATGCCCTCTTTGGTCACTATGCAGATCCGGAGTaGGTCCCCAGTGTACACATCTCTCTCAGCCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PDALFGHYADPE*VPSVHISLSRR Trigger: TCTGCGGCTGAGAGAGATGTGTACACTGGGGACGCACTCCGGATCTGCATAGTGACCAAAGAGGGCATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262193.7 ENST00000462957.1 |
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| CDS CAA 72 bp | TTCCTTAAGGAAACAGTTTCCTCCCTGATGCCCTCTTaGGTCACTATGCAGATCCGGAGTGCGTCCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: FLKETVSSLMPS*VTMQIRSASPV Trigger: CACTGGGGACGCACTCCGGATCTGCATAGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTTCCTTAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262193.7 ENST00000462957.1 |
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| CDS CAA 90 bp | GATCAGTCCTTCCTTAAGGAAACAGTTTCCTCCCTGATGCCCTCTTaGGTCACTATGCAGATCCGGAGTGCGTCCCCAGTGTACACATCT | + |
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Preference number: 6 (lower is better) Translates to: DQSFLKETVSSLMPS*VTMQIRSASPVYTS Trigger: AGATGTGTACACTGGGGACGCACTCCGGATCTGCATAGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTTCCTTAAGGAAGGACTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262193.7 |
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| CDS CCA 72 bp | ACCACATCTGTGCCCTTGAGGATCAGGTATAGACAGTaGTACTACAACGCAAGCTCTATGAGTTTAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TTSVPLRIRYRQ*YYNASSMSLEK Trigger: CTTCTCTAAACTCATAGAGCTTGCGTTGTAGTACCACTGTCTATACCTGATCCTCAAGGGCACAGATGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS TCA 72 bp | GTAAGTGTTAGCTATAAGTGCTATGGCACTGGAGTATaGCTAAGCACCTGGGCTCTGGAATTACATGAGACA | + |
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Preference number: 6 (lower is better) Translates to: VSVSYKCYGTGV*LSTWALELHET Trigger: TGTCTCATGTAATTCCAGAGCCCAGGTGCTTAGTCATACTCCAGTGCCATAGCACTTATAGCTAACACTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS CAA 90 bp | CAAGGTACTACTAATACAGAACAACTAAATACCACATCTGTGCCCTaGAGGATCAGGTATAGACAGTGGTACTACAACGCAAGCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: QGTTNTEQLNTTSVP*RIRYRQWYYNASSM Trigger: CATAGAGCTTGCGTTGTAGTACCACTGTCTATACCTGATCCTCAAGGGCACAGATGTGGTATTTAGTTGTTCTGTATTAGTAGTACCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS TCA 72 bp | GCTTCAATAATCTTTGTCAGCGTAAGACAGTCTCCATaGAAACCGCTGCATCCAATGACTGTTTTGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ASIIFVSVRQSP*KPLHPMTVLSV Trigger: AACAGACAAAACAGTCATTGGATGCAGCGGTTTTCATGGAGACTGTCTTACGCTGACAAAGATTATTGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262193.7 ENST00000462957.1 |
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| CDS CAA 72 bp | ACTAATACAGAACAACTAAATACCACATCTGTGCCCTaGAGGATCAGGTATAGACAGTGGTACTACAACGCA | + |
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Preference number: 6 (lower is better) Translates to: TNTEQLNTTSVP*RIRYRQWYYNA Trigger: TGCGTTGTAGTACCACTGTCTATACCTGATCCTCAAGGGCACAGATGTGGTATTTAGTTGTTCTGTATTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS TCA 72 bp | CGTAAGCACTCAGGAAACTTAAGCCACTATTTTTACTaGGGAGGGATTTGTGCTAAAGCTCTCAAGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: RKHSGNLSHYFY*GGICAKALKKK Trigger: TTTCTTCTTGAGAGCTTTAGCACAAATCCCTCCTCAGTAAAAATAGTGGCTTAAGTTTCCTGAGTGCTTACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS TCA 72 bp | CAAAGGATCAAATATGTAAGCCCTTATAGCAGTCCCTaGCATGTAACTGGTCCTCTAGTAAGTGTTAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: QRIKYVSPYSSP*HVTGPLVSVSY Trigger: ATAGCTAACACTTACTAGAGGACCAGTTACATGTCAGGGACTGCTATAAGGGCTTACATATTTGATCCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS GCA 72 bp | CTTACTAGGTATGTGATCTTGGACAAATCCTCCAAATaGAAGTTGATGATAACAGTACCTGTGTCACAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LTRYVILDKSSK*KLMITVPVSQG Trigger: ACCTTGTGACACAGGTACTGTTATCATCAACTTGCATTTGGAGGATTTGTCCAAGATCACATACCTAGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS CAA 72 bp | AGGTATGTGATCTTGGACAAATCCTCCAAATGCAAGTaGATGATAACAGTACCTGTGTCACAAGGTGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: RYVILDKSSKCK*MITVPVSQGVY Trigger: ATACACACCTTGTGACACAGGTACTGTTATCATCAACTTGCATTTGGAGGATTTGTCCAAGATCACATACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS GCA 72 bp | AAGCGTCAATTTCATCATATATACAACAGAGATCACTaGAGTTGCTACCTCATTAGGGTGTTCAAAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: KRQFHHIYNRDH*SCYLIRVFKGS Trigger: TGATCCTTTGAACACCCTAATGAGGTAGCAACTGCAGTGATCTCTGTTGTATATATGATGAAATTGACGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS CAA 72 bp | TTAATTTGTAACATTTGGGGCTATCCCGCGTATGAATaGAAAACCCTTCACTCAATCGAGTATCAGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LICNIWGYPAYE*KTLHSIEYQKQ Trigger: TTGCTTCTGATACTCGATTGAGTGAAGGGTTTTCAATTCATACGCGGGATAGCCCCAAATGTTACAAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000262193.7 ENST00000462957.1 |
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| CDS GCA 72 bp | TCCAGGGTGGTAATCCTATCCCTACAAATAGAAGAATaGTCCATAGTACATAATGGGATAAAATACTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: SRVVILSLQIEE*SIVHNGIKYSR Trigger: TCTAGAGTATTTTATCCCATTATGTACTATGGAGCATTCTTCTATTTGTAGGGATAGGATTACCACCCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS GCA 72 bp | CAATTTCATCATATATACAACAGAGATCACTGCAGTTaGTACCTCATTAGGGTGTTCAAAGGATCAAATATG | + |
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Preference number: 6 (lower is better) Translates to: QFHHIYNRDHCS*YLIRVFKGSNM Trigger: CATATTTGATCCTTTGAACACCCTAATGAGGTAGCAACTGCAGTGATCTCTGTTGTATATATGATGAAATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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| CDS CAA 72 bp | AAATTATTAATAAGCCTAAATCAGGGCAAAGTCTCCTaGGCAGGAGTTAACAGAAAAGCCAATGAATTATCA | + |
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Preference number: 6 (lower is better) Translates to: KLLISLNQGKVS*AGVNRKANELS Trigger: TGATAATTCATTGGCTTTTCTGTTAACTCCTGCCAAGGAGACTTTGCCCTGATTTAGGCTTATTAATAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462957.1 |
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