Pregenerated sensors for PSMA5 (Homo sapiens)
Ensembl gene IDs: ENSG00000143106Ensembl transcript IDs: ENST00000271308.9, ENST00000484563.1, ENST00000490870.5, ENST00000538610.5
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTCCAAATTGTCTATCAAGACCCAAGAACTGGTACAACACTGTTaGTGGCTGATTCCAACCCATCAATGTTTTGAGGAGGACCTCAAA | + |
|
Preference number: 1 (lower is better) Translates to: LSKLSIKTQELVQHC*WLIPTHQCFEEDLK Trigger: TTTGAGGTCCTCCTCAAAACATTGATGGGTTGGAATCAGCCATCAACAGTGTTGTACCAGTTCTTGGGTCTTGATAGACAATTTGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR TCA 90 bp | AATTGTCTATCAAGACCCAAGAACTGGTACAACACTGTTGATGGCTaGTTCCAACCCATCAATGTTTTGAGGAGGACCTCAAAACATGTT | + |
|
Preference number: 1 (lower is better) Translates to: NCLSRPKNWYNTVDG*FQPINVLRRTSKHV Trigger: AACATGTTTTGAGGTCCTCCTCAAAACATTGATGGGTTGGAATCAGCCATCAACAGTGTTGTACCAGTTCTTGGGTCTTGATAGACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR GCA 90 bp | CCAGCAAATAATTATGGGGTCCCTGTTAGTGAATTAAATCAATTCTaGATCATCCACATATGGATTAGCCATGTTGTGGACAGTGCAAGT | + |
|
Preference number: 1 (lower is better) Translates to: PANNYGVPVSELNQF*IIHIWISHVVDSAS Trigger: ACTTGCACTGTCCACAACATGGCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCCATAATTATTTGCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR GCA 90 bp | AGAATAGGGATATTAATAACACTGTCCTTTTGGCCCACTAACATTTaGATTTCAAACAAAAGACTGTATTACAATGGCTGGGCACAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: RIGILITLSFWPTNI*ISNKRLYYNGWAQW Trigger: CCACTGTGCCCAGCCATTGTAATACAGTCTTTTGTTTGAAATGCAAATGTTAGTGGGCCAAAAGGACAGTGTTATTAATATCCCTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR TCA 90 bp | AAGTACTTTTCAAATCTCCAGATTTCCCTATTACTCAAGAGCTGGTaGTCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTT | + |
|
Preference number: 1 (lower is better) Translates to: KYFSNLQISLLLKSW*SETRKFELFKSQQL Trigger: AAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACCAGCTCTTGAGTAATAGGGAAATCTGGAGATTTGAAAAGTACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAAACACTGTTGATGGCTaGTTCCAACCCATCAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LSCSSPNSLILCVHGHTANTVDG*FQPINV Trigger: AACATTGATGGGTTGGAATCAGCCATCAACAGTGTT...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATACTGGTACAACACTGTTaGTGGCTGATTCCAACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: IVYCLALPTRSFTGAQIILVQHC*WLIPTH Trigger: ATGGGTTGGAATCAGCCATCAACAGTGTTGTACCAG...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATCTGTATTACAATGGCTaGGCACAGTGGCTCTCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HIVQLPTHQYTQSPANNYLYYNG*AQWLSP Trigger: AGGCGAGAGCCACTGTGCCCAGCCATTGTAATACAG...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAATAACACTGTCCTTTTaGCCCACTAACATTTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LSCSSPNSLILCVHGHTAITLSF*PTNICI Trigger: AATGCAAATGTTAGTGGGCCAAAAGGACAGTGTTAT...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCTCAAGACCCAAGAACTaGTACAACACTGTTGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: GVPVSELNQFCIIHIWISSRPKN*YNTVDG Trigger: GCCATCAACAGTGTTGTACCAGTTCTTGGGTCTTGA...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAAACCCATCAATGTTTTaGGGAGGACCTCAAAACATG | + |
|
Preference number: 2 (lower is better) Translates to: IVYCLALPTRSFTGAQIINPSMF*GGPQNM Trigger: CATGTTTTGAGGTCCTCCTCAAAACATTGATGGGTT...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAATAGAGATTTGTAATTaGTTGCCAGTGAGGCCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IVYCLALPTRSFTGAQIIIEICN*LPVRPR Trigger: CCTTGGCCTCACTGGCAATCAATTACAAATCTCTAT...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR CAA 90 bp | AGATTTCCCTATTACTCAAGAGCTGGTGATCTGAAACAAGAAAATTaGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: RFPYYSRAGDLKQEN*SCSSPNSLILCVHG Trigger: CCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACCAGCTCTTGAGTAATAGGGAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATAAGACTGTATTACAATaGCTGGGCACAGTGGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HIVQLPTHQYTQSPANNYKTVLQ*LGTVAL Trigger: GAGAGCCACTGTGCCCAGCCATTGTAATACAGTCTT...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR TCA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGAGCATTTTTCCCCCTATaGAATGCATGTGATTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LNIKVALSVLLCEILDIRAFFPL*NACDSE Trigger: CTCTGAATCACATGCATTTCATAGGGGGAAAAATGC...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATACCACTGGGAAGAGCTaGACTAGTTCATTTATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: HIVQLPTHQYTQSPANNYTTGKS*TSSFIN Trigger: GTTGATAAATGAACTAGTCCAGCTCTTCCCAGTGGT...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATTGCATCATCCACATATaGATTAGCCATGTTGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: HIVQLPTHQYTQSPANNYCIIHI*ISHVVD Trigger: GTCCACAACATGGCTAATCCATATGTGGATGATGCA...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR GCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATGCAAAAATACACGTTTaGTCCAGAAATTATAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HIVQLPTHQYTQSPANNYAKIHV*SRNYRA Trigger: GGCCCTATAATTTCTGGAGCAAACGTGTATTTTTGC...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR GCA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGACCATGTTGTGGACAGTaGAAGTACTTTTCAAATCTC | + |
|
Preference number: 2 (lower is better) Translates to: LNIKVALSVLLCEILDIRPCCGQ*KYFSNL Trigger: GAGATTTGAAAAGTACTTGCACTGTCCACAACATGG...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGATTATAGGGCCGAAATaGATTTACAGTGCTGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GDLKQENLSCSSPNSLILIIGPK*IYSAVN Trigger: GTTAACAGCACTGTAAATCCATTTCGGCCCTATAAT...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGAAATTTTGTGTGTCCATaGGCACACAGCATTAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: LNIKVALSVLLCEILDIRNFVCP*AHSIRF Trigger: GAATCTAATGCTGTGTGCCCATGGACACACAAAATT...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGAAAAATGCACATACAATaGAGATTTTCCAAGGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: LNIKVALSVLLCEILDIRKMHIQ*RFSKEQ Trigger: CTGTTCCTTGGAAAATCTCCATTGTATGTGCATTTT...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR TCA 72 bp | TCAAGACCCAAGAACTGGTACAACACTGTTGATGGCTaGTTCCAACCCATCAATGTTTTGAGGAGGACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRPKNWYNTVDG*FQPINVLRRTS Trigger: TGAGGTCCTCCTCAAAACATTGATGGGTTGGAATCAGCCATCAACAGTGTTGTACCAGTTCTTGGGTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR TCA 72 bp | TTGTCTATCAAGACCCAAGAACTGGTACAACACTGTTaGTGGCTGATTCCAACCCATCAATGTTTTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSIKTQELVQHC*WLIPTHQCFEE Trigger: CTCCTCAAAACATTGATGGGTTGGAATCAGCCATCAACAGTGTTGTACCAGTTCTTGGGTCTTGATAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGCTTGAACCCAGGAGTTaGAAACCAGCCTGGGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: GDLKQENLSCSSPNSLILLEPRS*KPAWAI Trigger: TATTGCCCAGGCTGGTTTCAAACTCCTGGGTTCAAG...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CAA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATACTGGTACAACACTGTaGATGGCTGATTCCAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: HIVQLPTHQYTQSPANNYTGTTL*MADSNP Trigger: TGGGTTGGAATCAGCCATCAACAGTGTTGTACCAGT...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGACCCAACAGCTTAATTTaGTGTGTCCATGGGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: LNIKVALSVLLCEILDIRPNSLI*CVHGHT Trigger: TGTGTGCCCATGGACACACAAAATTAAGCTGTTGGG...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATACTGAAACAAGAAAATTaGAGCTGTTCAAGTCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: IVYCLALPTRSFTGAQIILKQEN*SCSSPN Trigger: GTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAG...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR TCA 72 bp | AGAAGTTTCACAGGAGCACAGATCATATCTACCATTTaGACAGCTCTCTGCCTGATGGCTAATACATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RSFTGAQIISTI*TALCLMANTFL Trigger: AAGAAATGTATTAGCCATCAGGCAGAGAGCTGTTCAAATGGTAGATATGATCTGTGCTCCTGTGAAACTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCTTATTAGAACTGAAATaGTCCCAGAGAAGTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GVPVSELNQFCIIHIWISLLELK*SQRSSE Trigger: CTCAGAACTTCTCTGGGACAATTTCAGTTCTAATAA...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGCAACCCATCAATGTTTaGAGGAGGACCTCAAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: GDLKQENLSCSSPNSLILQPINV*RRTSKH Trigger: ATGTTTTGAGGTCCTCCTCAAAACATTGATGGGTTG...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR TCA 72 bp | ATTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTaGGATACTGGACATAAGATTTCACCTTATTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IKYKSGTVSSPL*DTGHKISPYLQ Trigger: CTGCAAATAAGGTGAAATCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAGCTACGCGGGGATTCTaGGGACCAACACGACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTAATRGF*GPTRLH Trigger: GTGGAGTCGTGTTGGTCCTCAGAATCCCCGCGTAGC...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCACAAAGGGACGAGACATaGCACCTGGATCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTAQRDET*HLDLHL Trigger: AAGATGCAGATCCAGGTGCCATGTCTCGTCCCTTTG...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCACTGGTACAACACTGTTaGTGGCTGATTCCAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTALVQHC*WLIPTH Trigger: ATGGGTTGGAATCAGCCATCAACAGTGTTGTACCAG...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCCTGTATTACAATGGCTaGGCACAGTGGCTCTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISLYYNG*AQWLSP Trigger: AGGCGAGAGCCACTGTGCCCAGCCATTGTAATACAG...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAATAGAGATTTGTAATTaGTTGCCAGTGAGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTAIEICN*LPVRPR Trigger: CCTTGGCCTCACTGGCAATCAATTACAAATCTCTAT...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCACCTATGAAATGCATGTaGTTCAGAGACACAACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTAPMKCM*FRDTTH Trigger: GTGAGTTGTGTCTCTGAATCACATGCATTTCATAGG...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAGCATTTTTCCCCCTATaGAATGCATGTGATTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTAAFFPL*NACDSE Trigger: CTCTGAATCACATGCATTTCATAGGGGGAAAAATGC...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCGGTAAAACACAAATATaGTGCCCAGCCAGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISGKTQI*CPASGR Trigger: CCTCCCACTGGCTGGGCAGCATATTTGTGTTTTACC...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAACTGCAAAGCCAGATTaGACACAGCTTGGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: IVYCLALPTRSFTGAQIITAKPD*TQLGSH Trigger: GTGTGACCCAAGCTGTGTCCAATCTGGCTTTGCAGT...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCACGAGACATGGCACCTaGATCTGCATCTTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISTRHGT*ICIFFS Trigger: GGAGAAGAAGATGCAGATCCAGGTGCCATGTCTCGT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCAACATGTGGAAATTCTaGCCAGGCTGCACTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISNMWKF*PGCTVA Trigger: AGCCACAGTGCAGCCTGGCCAGAATTTCCACATGTT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCATGCTGCCCAGCCAGTaGGAGGGAAAACAACTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISMLPSQ*EGKQLK Trigger: CTTAAGTTGTTTTCCCTCCCACTGGCTGGGCAGCAT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAAACAGTGCCACCTCCTaGAGAAATTACCAAATACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTANSATS*RNYQIH Trigger: GTGTATTTGGTAATTTCTCCAGGAGGTGGCACTGTT...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCCATGGCACCTGGATCTaGATCTTCTTCTCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISHGTWI*IFFSKL Trigger: CAGTTTGGAGAAGAAGATGCAGATCCAGGTGCCATG...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAACACCCTCTGATGTCTaGATCCCAATGGCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVYCLALPTRSFTGAQIITPSDV*IPMAVE Trigger: TTCTACAGCCATTGGGATCCAGACATCAGAGGGTGT...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATTCTTGCAAGGAGCTCTaGGCACCCTCTGAAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HIVQLPTHQYTQSPANNYSCKEL*APSEAE Trigger: CTCTGCTTCAGAGGGTGCCCAGAGCTCCTTGCAAGA...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCTTGTCTCATTGTAGGTaGACCAGTGGTTCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISLSHCR*TSGSVS Trigger: AGACACAGAACCACTGGTTCACCTACAATGAGACAA...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCGTCCCAGAGAAGTTCTaGGGATCAGGATTCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISVPEKF*GSGFLK Trigger: TTTAAGGAATCCTGATCCTCAGAACTTCTCTGGGAC...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCGAACAGCTCTCTGCCTaGTGGCTAATACATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISEQLSA*WLIHFL Trigger: CAAGAAATGTATTAGCCATCAGGCAGAGAGCTGTTC...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAATTTCTTTGTTTGGGTaGCACAAAGATGAATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTAISLFG*HKDEWS Trigger: AGACCATTCATCTTTGTGTCACCCAAACAAAGAAAT...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAAGTGAAAAATGTTTTTaGATGCCATCTGAGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTASEKCF*MPSEQD Trigger: ATCCTGCTCAGATGGCATTCAAAAACATTTTTCACT...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAAGCAAAATGATACAATaGACCCAACCCGATATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTASKMIQ*TQPDIY Trigger: GTAAATATCGGGTTGGGTGCATTGTATCATTTTGCT...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGGCTGGGCTCCATCAGTaGGGAAGTAATTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDLKQENLSCSSPNSLILAGLHQ*GSNSLL Trigger: GAGAAGAGAATTACTTCCCCACTGATGGAGCCCAGC...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGAGGCCAGGCTGCACTGTaGCTAGCTCAATGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNIKVALSVLLCEILDIRGQAAL*LAQCLL Trigger: CAACAAACATTGAGCTAGCCACAGTGCAGCCTGGCC...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATATCAAGACCCAAGAACTaGTACAACACTGTTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVYCLALPTRSFTGAQIISRPKN*YNTVDG Trigger: GCCATCAACAGTGTTGTACCAGTTCTTGGGTCTTGA...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGACAATTTTCTCAATGCTaGTGGGCTCCATCAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNIKVALSVLLCEILDIRQFSQC*WAPSVG Trigger: CCCCACTGATGGAGCCCAGCAGCATTGAGAAAATTG...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCTCTTCTTCTCCAAACTaGAAAGCCAGATTGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISSSSPN*KARLDT Trigger: TGTGTCCAATCTGGCTTTGCAGTTTGGAGAAGAAGA...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATAAATTCTGGCCAGGCTaGACTGTGGCTAGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: HIVQLPTHQYTQSPANNYKFWPG*TVASSM Trigger: CATTGAGCTAGCCACAGTGCAGCCTGGCCAGAATTT...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGAAGACTGTATTACAATaGCTGGGCACAGTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDLKQENLSCSSPNSLILKTVLQ*LGTVAL Trigger: GAGAGCCACTGTGCCCAGCCATTGTAATACAGTCTT...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCACCACTGGGAAGAGCTaGACTAGTTCATTTATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISTTGKS*TSSFIN Trigger: GTTGATAAATGAACTAGTCCAGCTCTTCCCAGTGGT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAGGATTAGCCATGTTGTaGACAGTGCAAGTACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVYCLALPTRSFTGAQIIGLAML*TVQVLF Trigger: GAAAAGTACTTGCACTGTCCACAACATGGCTAATCC...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATATGCATCATCCACATATaGATTAGCCATGTTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVYCLALPTRSFTGAQIICIIHI*ISHVVD Trigger: GTCCACAACATGGCTAATCCATATGTGGATGATGCA...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCAATATTGTTTATTGTTTaGCTCTCCCCACTAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSSPNSLILCVHGHTAILFIV*LSPLEV Trigger: AACTTCTAGTGGGGAGAGCCAAACAATAAACAATAT...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCCTCCCAAAAGCAACATaGGCTTTATCCATTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISLPKAT*ALSISA Trigger: TGCAGAAATGGATAAAGCCCATGTTGCTTTTGGGAG...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATATTTGAGGATGATGAGTaGAGACTTGATGGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVYCLALPTRSFTGAQIIFEDDE*RLDGFF Trigger: AAAGAAGCCATCAAGTCTTCACTCATCATCCTCAAA...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCGGCCATAAACCCAAATaGGGATATAGTCATTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISGHKPK*GYSHCR Trigger: TCTACAATGACTATATCCTCATTTGGGTTTATGGCC...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCCCATGTTGTGGACAGTaGAAGTACTTTTCAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISPCCGQ*KYFSNL Trigger: GAGATTTGAAAAGTACTTGCACTGTCCACAACATGG...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGAAAAACACAAATATGCTaGCCAGCCAGTGGGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNIKVALSVLLCEILDIRKTQIC*PASGRE Trigger: TTCCCTCCCACTGGCTGGGCAGCATATTTGTGTTTT...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCAAAACAACTCAACAGTaGCACCTCCTGGAGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISKTTQQ*HLLEKL Trigger: TAATTTCTCCAGGAGGTGGCACTGTTGAGTTGTTTT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATTCCTTTGTGAACATGTaGAAATTCTGGCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HIVQLPTHQYTQSPANNYSFVNM*KFWPGC Trigger: GCAGCCTGGCCAGAATTTCCACATGTTCACAAAGGA...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCAATTTTGTGTGTCCATaGGCACACAGCATTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISNFVCP*AHSIRF Trigger: GAATCTAATGCTGTGTGCCCATGGACACACAAAATT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR CAA 72 bp | GAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTaGTGTGTCCATGGGCACACAGCATTAGATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ENLSCSSPNSLI*CVHGHTALDSS Trigger: TGAAGAATCTAATGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGATCATATCTACCATTTaGACAGCTCTCTGCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GDLKQENLSCSSPNSLILIISTI*TALCLM Trigger: CATCAGGCAGAGAGCTGTTCAAATGGTAGATATGAT...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATCATTGTAGAGCAAAATaGTACAATGCACCCAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: HIVQLPTHQYTQSPANNYHCRAK*YNAPNP Trigger: CGGGTTGGGTGCATTGTATCATTTTGCTCTACAATG...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGACTACAATTTTCTCAATaGTGCTGGGCTCCATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNIKVALSVLLCEILDIRLQFSQ*CWAPSV Trigger: CACTGATGGAGCCCAGCAGCATTGAGAAAATTGTAG...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATCAATTAGCCCACTCATaGCACAACCTATGTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HIVQLPTHQYTQSPANNYQLAHS*HNLCEH Trigger: ATGCTCACATAGGTTGTGCCATGAGTGGGCTAATTG...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCATTATAGGGCCGAAATaGATTTACAGTGCTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVPVSELNQFCIIHIWISIIGPK*IYSAVN Trigger: GTTAACAGCACTGTAAATCCATTTCGGCCCTATAAT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATAACCCATCAATGTTTTaGGGAGGACCTCAAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: HIVQLPTHQYTQSPANNYNPSMF*GGPQNM Trigger: CATGTTTTGAGGTCCTCCTCAAAACATTGATGGGTT...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATAACACTGTTGATGGCTaGTTCCAACCCATCAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HIVQLPTHQYTQSPANNYNTVDG*FQPINV Trigger: AACATTGATGGGTTGGAATCAGCCATCAACAGTGTT...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGGTCAGTTCTCCTTTGTaGGATACTGGACATAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: GDLKQENLSCSSPNSLILVSSPL*DTGHKI Trigger: AATCTTATGTCCAGTATCTCACAAAGGAGAACTGAC...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGCCAAGACGTGAGAAGTaGAAAATGTTTTTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDLKQENLSCSSPNSLILPRREK*KMFLNA Trigger: GGCATTCAAAAACATTTTTCACTTCTCACGTCTTGG...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR GCA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGGCAAAAATACACGTTTaGTCCAGAAATTATAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDLKQENLSCSSPNSLILAKIHV*SRNYRA Trigger: GGCCCTATAATTTCTGGAGCAAACGTGTATTTTTGC...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAAAAATGCACATACAATaGAGATTTTCCAAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: IVYCLALPTRSFTGAQIIKMHIQ*RFSKEQ Trigger: CTGTTCCTTGGAAAATCTCCATTGTATGTGCATTTT...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CCA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGAACTGTATCAGCTTCTaGGACATGGTAACTTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GDLKQENLSCSSPNSLILNCISF*DMVTCI Trigger: TATGCAAGTTACCATGTCCCAGAAGCTGATACAGTT...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR TCA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATTCTCAGTTACTGGACTaGAAAGATAAAGCTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HIVQLPTHQYTQSPANNYSQLLD*KDKADE Trigger: TTCATCAGCTTTATCTTTTCAGTCCAGTAACTGAGA...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| 3UTR CAA 72 bp | TATTACTCAAGAGCTGGTGATCTGAAACAAGAAAATTaGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YYSRAGDLKQEN*SCSSPNSLILC Trigger: ACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACCAGCTCTTGAGTAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS TCA 90 bp | TCCAGACAATATATCCAGCCAAAGCTACGACTGCCTTCGCGCTTCTaGAGAAACTATACACCGCAGCATGCCCTACTACAAACCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRQYIQPKLRLPSRF*RNYTPQHALLQTSC Trigger: GCAACTGGTTTGTAGTAGGGCATGCTGCGGTGTATAGTTTCTTCAGAAGCGCGAAGGCAGTCGTAGCTTTGGCTGGATATATTGTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS-3UTR CAA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCACTTGTGGTAAACTTCTaGCAAGGAGCTCTGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LSCSSPNSLILCVHGHTALVVNF*QGALGT Trigger: GGTGCCCAGAGCTCCTTGCAAGAAGTTTACCACAAG...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS GCA 90 bp | CAAAGGCAGCTGAGGGGAGAATATCCTTTAACTACGTCCACCTCCTaGCATGATGCTCCCACACAAAGTCAATTAGGAAACAATGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QRQLRGEYPLTTSTS*HDAPTQSQLGNNAC Trigger: GCATGCATTGTTTCCTAATTGACTTTGTGTGGGAGCATCATGGCAGGAGGTGGACGTAGTTAAAGGATATTCTCCCCTCAGCTGCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS CCA 90 bp | GGTACAAGTTATTACTCACCAAAGGCGGGCTGTTATTTACAAGCCTaGCAGCAAAGGCAGCTGAGGGGAGAATATCCTTTAACTACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTSYYSPKAGCYLQA*QQRQLRGEYPLTTS Trigger: GGACGTAGTTAAAGGATATTCTCCCCTCAGCTGCCTTTGCTGCCAGGCTTGTAAATAACAGCCCGCCTTTGGTGAGTAATAACTTGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS GCA 90 bp | TCTTCAAGTTCTTCCTTTGTGAACATGTGGAAATTCTGGCCAGGCTaGACTGTGGCTAGCTCAATGTTTGTTGCATTCAGCTTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSFVNMWKFWPG*TVASSMFVAFSFSS Trigger: GGAGGAGAAGCTGAATGCAACAAACATTGAGCTAGCCACAGTGCAGCCTGGCCAGAATTTCCACATGTTCACAAAGGAAGAACTTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271308.9 ENST00000490870.5 ENST00000538610.5 |
||
| CDS GCA 90 bp | AAGAAAACTCGACAGAAGTATCACACTCACCATGGCACCTGGATCTaGATCTTCTTCTCCAAACTGCAAAGCCAGATTGGACACAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KKTRQKYHTHHGTWI*IFFSKLQSQIGHSL Trigger: CAAGCTGTGTCCAATCTGGCTTTGCAGTTTGGAGAAGAAGATGCAGATCCAGGTGCCATGGTGAGTGTGATACTTCTGTCGAGTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS TCA 90 bp | GCAGCTGAGGGGAGAATATCCTTTAACTACGTCCACCTCCTGCCATaGTGCTCCCACACAAAGTCAATTAGGAAACAATGCATGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AAEGRISFNYVHLLP*CSHTKSIRKQCMLY Trigger: ATAAAGCATGCATTGTTTCCTAATTGACTTTGTGTGGGAGCATCATGGCAGGAGGTGGACGTAGTTAAAGGATATTCTCCCCTCAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS TCA 90 bp | ATGGCTGTAGAACCAAGCTTGATAGCCTCAATGGCATATTCCACTTaGAATAATCTTCCTTCGGGAGAAAAAGTATTCACGCCCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MAVEPSLIASMAYST*NNLPSGEKVFTPLS Trigger: CGACAGGGGCGTGAATACTTTTTCTCCCGAAGGAAGATTATTTCAAGTGGAATATGCCATTGAGGCTATCAAGCTTGGTTCTACAGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000271308.9 ENST00000484563.1 |
||
| CDS CCA 90 bp | TTGATAACCTCTTCAAGTTCTTCCTTTGTGAACATGTGGAAATTCTaGCCAGGCTGCACTGTGGCTAGCTCAATGTTTGTTGCATTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LITSSSSSFVNMWKF*PGCTVASSMFVAFS Trigger: GCTGAATGCAACAAACATTGAGCTAGCCACAGTGCAGCCTGGCCAGAATTTCCACATGTTCACAAAGGAAGAACTTGAAGAGGTTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271308.9 ENST00000490870.5 ENST00000538610.5 |
||
| CDS CCA 90 bp | AACAATAAGAAAACTCGACAGAAGTATCACACTCACCATGGCACCTaGATCTGCATCTTCTTCTCCAAACTGCAAAGCCAGATTGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: NNKKTRQKYHTHHGT*ICIFFSKLQSQIGH Trigger: GTGTCCAATCTGGCTTTGCAGTTTGGAGAAGAAGATGCAGATCCAGGTGCCATGGTGAGTGTGATACTTCTGTCGAGTTTTCTTATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS-3UTR CAA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCAACTGCAAAGCCAGATaGGACACAGCTTGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVPVSELNQFCIIHIWISNCKAR*DTAWVT Trigger: TGTGACCCAAGCTGTGTCCAATCTGGCTTTGCAGTT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS TCA 90 bp | ATGGCTGTAGAACCAAGCTTGATAGCCTCAATGGCATATTCCACTTaGAATAATCTTCCTTCGGGAGAAAAAGTATTCACGCCCCCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: MAVEPSLIASMAYST*NNLPSGEKVFTPPN Trigger: GTTAGGGGGCGTGAATACTTTTTCTCCCGAAGGAAGATTATTTCAAGTGGAATATGCCATTGAGGCTATCAAGCTTGGTTCTACAGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS GCA 90 bp | CAGGTGGTAAAACTTCGACAGGATCAGCATATACTTGACAGGAAATaGAGCATCTCATACCACTCAGTACAAAGAAAATGTCTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVVKLRQDQHILDRK*SISYHSVQRKCLPS Trigger: GGAAGGCAGACATTTTCTTTGTACTGAGTGGTATGAGATGCTGCATTTCCTGTCAAGTATATGCTGATCCTGTCGAAGTTTTACCACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS-3UTR CAA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCACTGGTACAACACTGTaGATGGCTGATTCCAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GVPVSELNQFCIIHIWISTGTTL*MADSNP Trigger: TGGGTTGGAATCAGCCATCAACAGTGTTGTACCAGT...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATACCCAACAGCTTAATTTaGTGTGTCCATGGGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: IVYCLALPTRSFTGAQIIPNSLI*CVHGHT Trigger: TGTGTGCCCATGGACACACAAAATTAAGCTGTTGGG...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | TTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCACACAGCACACATCATGAAACCATaGCTGTTCGTAGTAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LSCSSPNSLILCVHGHTAHIMKP*LFVVRS Trigger: TGATCTTACTACGAACAGCAATGGTTTCATGATGTG...TGCTGTGTGCCCATGGACACACAAAATTAAGCTGTTGGGACTTGAACAGCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS TCA 90 bp | GTGGTAACTGCAGGTGGTAAAACTTCGACAGGATCAGCATATACTTaGCAGGAAATGCAGCATCTCATACCACTCAGTACAAAGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: VVTAGGKTSTGSAYT*QEMQHLIPLSTKKM Trigger: CATTTTCTTTGTACTGAGTGGTATGAGATGCTGCATTTCCTGTCAAGTATATGCTGATCCTGTCGAAGTTTTACCACCTGCAGTTACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS TCA 90 bp | TATCACAAGGACTCTACGCAACGACGGACAAGAGAATTACTGCCTTaGAAAAGAGGGTTATGCCTCAAAGCACCAAGTTTACTCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YHKDSTQRRTRELLP*KRGLCLKAPSLLFQ Trigger: TTGAAAGAGTAAACTTGGTGCTTTGAGGCATAACCCTCTTTTTCAAGGCAGTAATTCTCTTGTCCGTCGTTGCGTAGAGTCCTTGTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS GCA 90 bp | AAACATATCACAAGGACTCTACGCAACGACGGACAAGAGAATTACTaGCTTGAAAAAGAGGGTTATGCCTCAAAGCACCAAGTTTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: KHITRTLRNDGQENY*LEKEGYASKHQVYS Trigger: AGAGTAAACTTGGTGCTTTGAGGCATAACCCTCTTTTTCAAGGCAGTAATTCTCTTGTCCGTCGTTGCGTAGAGTCCTTGTGATATGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS CCA 90 bp | TGCAATGATTGGACAGCTAAACTCCAAGCCCCAGGAAGTTCTAACTaGGAATTCTACCCAAAATTACTCCCAAGAGCCACATCTAATATT | + |
|
Preference number: 5 (lower is better) Translates to: CNDWTAKLQAPGSSN*EFYPKLLPRATSNI Trigger: AATATTAGATGTGGCTCTTGGGAGTAATTTTGGGTAGAATTCCCAGTTAGAACTTCCTGGGGCTTGGAGTTTAGCTGTCCAATCATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS-3UTR CAA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAGCTGTAGAACCAAGCTaGATAGCCTCAATGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: IVYCLALPTRSFTGAQIIAVEPS*IASMAY Trigger: ATATGCCATTGAGGCTATCAAGCTTGGTTCTACAGC...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCTCCTCCATTACTTGTTaGAGGATGATGAGTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVPVSELNQFCIIHIWISSSITC*RMMSED Trigger: GTCTTCACTCATCATCCTCAAACAAGTAATGGAGGA...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGACTTGAACCCAGGAGTTaGAAACCAGCCTGGGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LNIKVALSVLLCEILDIRLEPRS*KPAWAI Trigger: TATTGCCCAGGCTGGTTTCAAACTCCTGGGTTCAAG...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS TCA 90 bp | TGTTGCATTCAGCTTCTCCTCCATTACTTGTTTGAGGATGATGAGTaGAGACTTGATGGCTTCTTTCAAAGTCATAGACTTGTGGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CCIQLLLHYLFEDDE*RLDGFFQSHRLVVN Trigger: GTTTACCACAAGTCTATGACTTTGAAAGAAGCCATCAAGTCTTCACTCATCATCCTCAAACAAGTAATGGAGGAGAAGCTGAATGCAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271308.9 ENST00000490870.5 ENST00000538610.5 |
||
| CDS-3UTR CAA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAATGATGAGTGAAGACTaGATGGCTTCTTTCAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IVYCLALPTRSFTGAQIIMMSED*MASFKV Trigger: GACTTTGAAAGAAGCCATCAAGTCTTCACTCATCAT...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCCTGAAACAAGAAAATTaGAGCTGTTCAAGTCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVPVSELNQFCIIHIWISLKQEN*SCSSPN Trigger: GTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAG...GCTAATCCATATGTGGATGATGCAGAATTGATTTAATTCACTAACAGGGACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | GGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTATGGATTAGCCATGTaGTGGACAGTGCAAGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: GDLKQENLSCSSPNSLILYGLAM*WTVQVL Trigger: AAGTACTTGCACTGTCCACAACATGGCTAATCCATA...CAAAATTAAGCTGTTGGGACTTGAACAGCTCAAATTTTCTTGTTTCAGATCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTTTATTGTTTGGCTCTCCCCACTAGAAGTTTCACAGGAGCACAGATCATAAATATTGTTTATTGTTaGGCTCTCCCCACTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: IVYCLALPTRSFTGAQIINIVYC*ALPTRS Trigger: ACTTCTAGTGGGGAGAGCCAAACAATAAACAATATT...TATGATCTGTGCTCCTGTGAAACTTCTAGTGGGGAGAGCCAAACAATAAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGACTGGGACATGGTAACTaGCATATGGCACTGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNIKVALSVLLCEILDIRLGHGN*HMALRK Trigger: TTTTCTCAGTGCCATATGCAAGTTACCATGTCCCAG...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | TTAAATATAAAAGTGGCACTGTCAGTTCTCCTTTGTGAGATACTGGACATAAGACAACCCATCAATGTTTaGAGGAGGACCTCAAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LNIKVALSVLLCEILDIRQPINV*RRTSKH Trigger: ATGTTTTGAGGTCCTCCTCAAAACATTGATGGGTTG...TCTTATGTCCAGTATCTCACAAAGGAGAACTGACAGTGCCACTTTTATATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATGATCATATCTACCATTaGAACAGCTCTCTGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HIVQLPTHQYTQSPANNYDHIYH*NSSLPD Trigger: ATCAGGCAGAGAGCTGTTCAAATGGTAGATATGATC...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS-3UTR CAA 90 bp | CATATAGTACAACTTCCTACACATCAATATACCCAGAGCCCAGCAAATAATTATTTATTAGAACTGAAATaGTCCCAGAGAAGTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HIVQLPTHQYTQSPANNYLLELK*SQRSSE Trigger: CTCAGAACTTCTCTGGGACAATTTCAGTTCTAATAA...ATAATTATTTGCTGGGCTCTGGGTATATTGATGTGTAGGAAGTTGTACTATATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271308.9 |
||
| CDS TCA 72 bp | TGTTTGTTCAAGGCAGTCATACTAGGCACGAAAAGATaGACGGAGCAAAGAGTGACCCTTGGCCTTCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CLFKAVILGTKR*TEQRVTLGLLR Trigger: CCGGAGAAGGCCAAGGGTCACTCTTTGCTCCGTTCATCTTTTCGTGCCTAGTATGACTGCCTTGAACAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS GCA 72 bp | CAGACTCCAGACAATATATCCAGCCAAAGCTACGACTaGCTTCGCGCTTCTGAAGAAACTATACACCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QTPDNISSQSYD*LRASEETIHRS Trigger: GCTGCGGTGTATAGTTTCTTCAGAAGCGCGAAGGCAGTCGTAGCTTTGGCTGGATATATTGTCTGGAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS TCA 72 bp | TATATCCAGCCAAAGCTACGACTGCCTTCGCGCTTCTaGAGAAACTATACACCGCAGCATGCCCTACTACAA | + |
|
Preference number: 6 (lower is better) Translates to: YIQPKLRLPSRF*RNYTPQHALLQ Trigger: TTGTAGTAGGGCATGCTGCGGTGTATAGTTTCTTCAGAAGCGCGAAGGCAGTCGTAGCTTTGGCTGGATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS GCA 72 bp | GCCTTCGCGCTTCTGAAGAAACTATACACCGCAGCATaGCCTACTACAAACCAGTTGCTTTTTCTTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AFALLKKLYTAA*PTTNQLLFLPG Trigger: TCCTGGAAGAAAAAGCAACTGGTTTGTAGTAGGGCATGCTGCGGTGTATAGTTTCTTCAGAAGCGCGAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS GCA 72 bp | CTGAGGGGAGAATATCCTTTAACTACGTCCACCTCCTaGCATGATGCTCCCACACAAAGTCAATTAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRGEYPLTTSTS*HDAPTQSQLGN Trigger: GTTTCCTAATTGACTTTGTGTGGGAGCATCATGGCAGGAGGTGGACGTAGTTAAAGGATATTCTCCCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS CCA 72 bp | TATTACTCACCAAAGGCGGGCTGTTATTTACAAGCCTaGCAGCAAAGGCAGCTGAGGGGAGAATATCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: YYSPKAGCYLQA*QQRQLRGEYPL Trigger: TAAAGGATATTCTCCCCTCAGCTGCCTTTGCTGCCAGGCTTGTAAATAACAGCCCGCCTTTGGTGAGTAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS CCA 72 bp | AAAACTCGACAGAAGTATCACACTCACCATGGCACCTaGATCTGCATCTTCTTCTCCAAACTGCAAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KTRQKYHTHHGT*ICIFFSKLQSQ Trigger: CTGGCTTTGCAGTTTGGAGAAGAAGATGCAGATCCAGGTGCCATGGTGAGTGTGATACTTCTGTCGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS TCA 72 bp | GGGAGAATATCCTTTAACTACGTCCACCTCCTGCCATaGTGCTCCCACACAAAGTCAATTAGGAAACAATGC | + |
|
Preference number: 6 (lower is better) Translates to: GRISFNYVHLLP*CSHTKSIRKQC Trigger: GCATTGTTTCCTAATTGACTTTGTGTGGGAGCATCATGGCAGGAGGTGGACGTAGTTAAAGGATATTCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS TCA 72 bp | GACTCTACGCAACGACGGACAAGAGAATTACTGCCTTaGAAAAGAGGGTTATGCCTCAAAGCACCAAGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: DSTQRRTRELLP*KRGLCLKAPSL Trigger: TAAACTTGGTGCTTTGAGGCATAACCCTCTTTTTCAAGGCAGTAATTCTCTTGTCCGTCGTTGCGTAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS CCA 72 bp | TCTTCAAGTTCTTCCTTTGTGAACATGTGGAAATTCTaGCCAGGCTGCACTGTGGCTAGCTCAATGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSFVNMWKF*PGCTVASSMFV Trigger: AACAAACATTGAGCTAGCCACAGTGCAGCCTGGCCAGAATTTCCACATGTTCACAAAGGAAGAACTTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271308.9 ENST00000490870.5 ENST00000538610.5 |
||
| CDS GCA 72 bp | AACTATACACCGCAGCATGCCCTACTACAAACCAGTTaGTTTTTCTTCCAGGAAGCACGTTTAACTTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: NYTPQHALLQTS*FFFQEARLTFC Trigger: ACAAAAAGTTAAACGTGCTTCCTGGAAGAAAAAGCAACTGGTTTGTAGTAGGGCATGCTGCGGTGTATAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS CAA 90 bp | GCTAGCTCAATGTTTGTTGCATTCAGCTTCTCCTCCATTACTTGTTaGAGGATGATGAGTGAAGACTTGATGGCTTCTTTCAAAGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: ASSMFVAFSFSSITC*RMMSEDLMASFKVI Trigger: TATGACTTTGAAAGAAGCCATCAAGTCTTCACTCATCATCCTCAAACAAGTAATGGAGGAGAAGCTGAATGCAACAAACATTGAGCTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271308.9 ENST00000490870.5 ENST00000538610.5 |
||
| CDS TCA 72 bp | CAGCTTCTCCTCCATTACTTGTTTGAGGATGATGAGTaGAGACTTGATGGCTTCTTTCAAAGTCATAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: QLLLHYLFEDDE*RLDGFFQSHRL Trigger: AAGTCTATGACTTTGAAAGAAGCCATCAAGTCTTCACTCATCATCCTCAAACAAGTAATGGAGGAGAAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271308.9 ENST00000490870.5 ENST00000538610.5 |
||
| CDS TCA 72 bp | TCACGCCCCCTAACTCAAAATTATGTCACCCGAAGATaGTTCTCTTCAATGTTCTGGAAGTTAAATATCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRPLTQNYVTRR*FSSMFWKLNID Trigger: GTCGATATTTAACTTCCAGAACATTGAAGAGAATCATCTTCGGGTGACATAATTTTGAGTTAGGGGGCGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS CAA 72 bp | ATGTTTGTTGCATTCAGCTTCTCCTCCATTACTTGTTaGAGGATGATGAGTGAAGACTTGATGGCTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: MFVAFSFSSITC*RMMSEDLMASF Trigger: GAAAGAAGCCATCAAGTCTTCACTCATCATCCTCAAACAAGTAATGGAGGAGAAGCTGAATGCAACAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271308.9 ENST00000490870.5 ENST00000538610.5 |
||
| CDS CAA 72 bp | CCACCATCTCACTACGCACATCCCTTTAAACTGGGATaGAAAACTGAAGGCTCAAATGTGGTTTTCTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: PPSHYAHPFKLG*KTEGSNVVFLI Trigger: AATTAAGAAAACCACATTTGAGCCTTCAGTTTTCAATCCCAGTTTAAAGGGATGTGCGTAGTGAGATGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||
| CDS GCA 72 bp | AAACTTCGACAGGATCAGCATATACTTGACAGGAAATaGAGCATCTCATACCACTCAGTACAAAGAAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: KLRQDQHILDRK*SISYHSVQRKC Trigger: ACATTTTCTTTGTACTGAGTGGTATGAGATGCTGCATTTCCTGTCAAGTATATGCTGATCCTGTCGAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000490870.5 ENST00000538610.5 |
||
| CDS CAA 90 bp | GAAGGCTCAAATGTGGTTTTCTTAATTAACATTAACCCTGAGTACTaGGGAGTACATGAGAGGAAGAGAAATAGCTCTGGAAATAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: EGSNVVFLININPEY*GVHERKRNSSGNKH Trigger: ATGTTTATTTCCAGAGCTATTTCTCTTCCTCTCATGTACTCCCAAGTACTCAGGGTTAATGTTAATTAAGAAAACCACATTTGAGCCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484563.1 |
||