Pregenerated sensors for PSMA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000106588Ensembl transcript IDs: ENST00000223321.9, ENST00000411875.1, ENST00000436986.5, ENST00000457444.6, ENST00000677139.1, ENST00000677578.1, ENST00000678407.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCTAATGGCACCTAAAAGTACCTATGCTTCTTTTCTTGTTCCATaGATCCGTGAAAGTCTGCAGATCCTCCCAGCTCTAGAAGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: YLMAPKSTYASFLVP*IRESLQILPALEAV Trigger: GACTGCTTCTAGAGCTGGGAGGATCTGCAGACTTTCACGGATTCATGGAACAAGAAAAGAAGCATAGGTACTTTTAGGTGCCATTAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR TCA 90 bp | CTGATAGCGAAGAGGGCATTAAGATTTGACTTAACCAAAATTGCCTaGCAACGAAAAAGTCATTTCATCATTCTGCTTGGCAATGTAGTC | + |
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Preference number: 1 (lower is better) Translates to: LIAKRALRFDLTKIA*QRKSHFIILLGNVV Trigger: GACTACATTGCCAAGCAGAATGATGAAATGACTTTTTCGTTGTCAGGCAATTTTGGTTAAGTCAAATCTTAATGCCCTCTTCGCTATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR TCA 90 bp | ATGGAAACACAGGCAACATCTGATAGCGAAGAGGGCATTAAGATTTaGCTTAACCAAAATTGCCTGACAACGAAAAAGTCATTTCATCAT | + |
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Preference number: 1 (lower is better) Translates to: METQATSDSEEGIKI*LNQNCLTTKKSFHH Trigger: ATGATGAAATGACTTTTTCGTTGTCAGGCAATTTTGGTTAAGTCAAATCTTAATGCCCTCTTCGCTATCAGATGTTGCCTGTGTTTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR CCA 90 bp | CAAAATCTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTTGTaGAGACACCAACAGGAACCAGCAAACCATTGTTTATTTATTTAC | + |
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Preference number: 1 (lower is better) Translates to: QNLRTRVPLNMFTYL*RHQQEPANHCLFIY Trigger: GTAAATAAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | CTCCCATGGAGACCTATTTGGCTTACCACTCTTCATAGGCCTAGTACAATCTCATGTTCCATGAATCCGTaGAAGTCTGCAGATCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LPWRPIWLTTLHRPSTISCSMNP*KSADPP Trigger: GGGAGGATCTGCAGACTTTCACGGATTCATGGAACA...TGAGATTGTACTAGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | AAACATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTTGTTCCATGAATCCGTaGAAGTCTGCAGATCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KHVYLLVETPTGTSKPLFCSMNP*KSADPP Trigger: GGGAGGATCTGCAGACTTTCACGGATTCATGGAACA...AAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | CTCCCATGGAGACCTATTTGGCTTACCACTCTTCATAGGCCTAGTACAATCTCATCTTTTCTTGTTCCATaGATCCGTGAAAGTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPWRPIWLTTLHRPSTISSFLVP*IRESLQ Trigger: CTGCAGACTTTCACGGATTCATGGAACAAGAAAAGA...TGAGATTGTACTAGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGGAGACCTATTTGGCTTACCACTCTTCATAGGCCTAGTACAATCTCATACCCTAGGATTTCACTaGTCAATACCTAATGGCACC | + |
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Preference number: 2 (lower is better) Translates to: SHGDLFGLPLFIGLVQSHTLGFH*SIPNGT Trigger: GGTGCCATTAGGTATTGATCAGTGAAATCCTAGGGT...ATGAGATTGTACTAGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGGAGACCTATTTGGCTTACCACTCTTCATAGGCCTAGTACAATCTCATTGGACGAACACCACCTaGCTGAGTATATTCTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: SHGDLFGLPLFIGLVQSHWTNTT*LSIFLH Trigger: ATGCAAGAATATACTCAGTCAGGTGGTGTTCGTCCA...ATGAGATTGTACTAGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | ACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTATTTATTTACTGTTCCATGAATCCGTaGAAGTCTGCAGATCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TYLWRHQQEPANHCLFIYCSMNP*KSADPP Trigger: GGGAGGATCTGCAGACTTTCACGGATTCATGGAACA...GTAAATAAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | TACATAATGTATCTCCCATGGAGACCTATTTGGCTTACCACTCTTCATAGGCCTACCCTAGGATTTCACTaGTCAATACCTAATGGCACC | + |
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Preference number: 2 (lower is better) Translates to: YIMYLPWRPIWLTTLHRPTLGFH*SIPNGT Trigger: GGTGCCATTAGGTATTGATCAGTGAAATCCTAGGGT...AGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAGATACATTATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | AAATCTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTTGTGGAGACACCAACCCTAGGATTTCACTaGTCAATACCTAATGGCACC | + |
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Preference number: 2 (lower is better) Translates to: KSKNPGSFKHVYLLVETPTLGFH*SIPNGT Trigger: GGTGCCATTAGGTATTGATCAGTGAAATCCTAGGGT...TGGTGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTATTTCCATGGAGACCTATTTaGCTTACCACTCTTCATAGG | + |
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Preference number: 2 (lower is better) Translates to: MFTYLWRHQQEPANHCLFPWRPI*LTTLHR Trigger: CCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGG...AAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | GATTTCACTGATCAATACCTAATGGCACCTAAAAGTACCTATGCTTCTTTTCTTTGGACGAACACCACCTaGCTGAGTATATTCTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: DFTDQYLMAPKSTYASFLWTNTT*LSIFLH Trigger: ATGCAAGAATATACTCAGTCAGGTGGTGTTCGTCCA...AAGAAAAGAAGCATAGGTACTTTTAGGTGCCATTAGGTATTGATCAGTGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTCATCCTTGAGTTTAAAAAGTCTAACAAAATCTAAGAACCCGGGTTCCTTTCAACTCCTAAAAGGCTaGAAGGTGGGTTTAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: CSSLSLKSLTKSKNPGSFQLLKG*KVGLTV Trigger: AACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTG...AAAGGAACCCGGGTTCTTAGATTTTGTTAGACTTTTTAAACTCAAGGATGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CCA 90 bp | TTACCAAAATCAGCATTTTGCTTTATGGAAACACAGGCAACATCTGATAGCGAACAACTCCTAAAAGGCTaGAAGGTGGGTTTAACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LPKSAFCFMETQATSDSEQLLKG*KVGLTV Trigger: AACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTG...TTCGCTATCAGATGTTGCCTGTGTTTCCATAAAGCAAAATGCTGATTTTGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CCA 90 bp | GATTTCACTGATCAATACCTAATGGCACCTAAAAGTACCTATGCTTCTTTTCTTCCATGGAGACCTATTTaGCTTACCACTCTTCATAGG | + |
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Preference number: 2 (lower is better) Translates to: DFTDQYLMAPKSTYASFLPWRPI*LTTLHR Trigger: CCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGG...AAGAAAAGAAGCATAGGTACTTTTAGGTGCCATTAGGTATTGATCAGTGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR CAA 90 bp | CATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATaGTTTATTTATTTACATAATGTATCTCCCATGGAGACCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: HVYLLVETPTGTSKP*FIYLHNVSPMETYL Trigger: CAAATAGGTCTCCATGGGAGATACATTATGTAAATAAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR TCA 90 bp | ATTTTAGCAACTCCTAAAAGGCTGGAAGGTGGGTTTAACAGTTTATTAGGATTTTCTTTTCTTGTTCCATaGATCCGTGAAAGTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ILATPKRLEGGFNSLLGFSFLVP*IRESLQ Trigger: CTGCAGACTTTCACGGATTCATGGAACAAGAAAAGA...AAATCCTAATAAACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTGCTAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CCA 90 bp | ATTTTAGCAACTCCTAAAAGGCTGGAAGGTGGGTTTAACAGTTTATTAGGATTTCAACTCCTAAAAGGCTaGAAGGTGGGTTTAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: ILATPKRLEGGFNSLLGFQLLKG*KVGLTV Trigger: AACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTG...AAATCCTAATAAACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTGCTAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTATTTATTTACATAATATGTTTACCTACTTGTaGAGACACCAACAGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: LVETPTGTSKPLFIYLHNMFTYL*RHQQEP Trigger: TGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACAT...ATTATGTAAATAAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CCA 90 bp | ATTTTAGCAACTCCTAAAAGGCTGGAAGGTGGGTTTAACAGTTTATTAGGATTTTTTCATCATTCTGCTTaGCAATGTAGTCTTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ILATPKRLEGGFNSLLGFFHHSA*QCSLQK Trigger: TTTCTGAAGACTACATTGCCAAGCAGAATGATGAAA...AAATCCTAATAAACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTGCTAAAAT 34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CCA 90 bp | GATTTCACTGATCAATACCTAATGGCACCTAAAAGTACCTATGCTTCTTTTCTTTTTCATCATTCTGCTTaGCAATGTAGTCTTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: DFTDQYLMAPKSTYASFLFHHSA*QCSLQK Trigger: TTTCTGAAGACTACATTGCCAAGCAGAATGATGAAA...AAGAAAAGAAGCATAGGTACTTTTAGGTGCCATTAGGTATTGATCAGTGAAATC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR TCA 72 bp | AAGTACCTATGCTTCTTTTCTTGTTCCATGAATCCGTaGAAGTCTGCAGATCCTCCCAGCTCTAGAAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: KYLCFFSCSMNP*KSADPPSSRSS Trigger: ACTGCTTCTAGAGCTGGGAGGATCTGCAGACTTTCACGGATTCATGGAACAAGAAAAGAAGCATAGGTACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR TCA 72 bp | GCACCTAAAAGTACCTATGCTTCTTTTCTTGTTCCATaGATCCGTGAAAGTCTGCAGATCCTCCCAGCTCTA | + |
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Preference number: 3 (lower is better) Translates to: APKSTYASFLVP*IRESLQILPAL Trigger: TAGAGCTGGGAGGATCTGCAGACTTTCACGGATTCATGGAACAAGAAAAGAAGCATAGGTACTTTTAGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CAA 90 bp | CTCCCATGGAGACCTATTTGGCTTACCACTCTTCATAGGCCTAGTACAATCTCAACCAAAATCAGCATTTaGCTTTATGGAAACACAGGC | + |
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Preference number: 3 (lower is better) Translates to: LPWRPIWLTTLHRPSTISTKISI*LYGNTG Trigger: GCCTGTGTTTCCATAAAGCAAAATGCTGATTTTGGT...TGAGATTGTACTAGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CAA 90 bp | GCTTTATGGAAACACAGGCAACATCTGATAGCGAAGAGGGCATTAAGATTTGACAACATGTTTACCTACTaGTGGAGACACCAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: ALWKHRQHLIAKRALRFDNMFTY*WRHQQE Trigger: TTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTT...GTCAAATCTTAATGCCCTCTTCGCTATCAGATGTTGCCTGTGTTTCCATAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CAA 90 bp | TCAGCATTTTGCTTTATGGAAACACAGGCAACATCTGATAGCGAAGAGGGCATTAACATGTTTACCTACTaGTGGAGACACCAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SAFCFMETQATSDSEEGINMFTY*WRHQQE Trigger: TTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTT...AATGCCCTCTTCGCTATCAGATGTTGCCTGTGTTTCCATAAAGCAAAATGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CAA 90 bp | AAATCTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTTGTGGAGACACCACCTATGCTTCTTTTCTaGTTCCATGAATCCGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KSKNPGSFKHVYLLVETPPMLLF*FHESVK Trigger: TTTCACGGATTCATGGAACAAGAAAAGAAGCATAGG...TGGTGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR TCA 72 bp | CAGGCAACATCTGATAGCGAAGAGGGCATTAAGATTTaGCTTAACCAAAATTGCCTGACAACGAAAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: QATSDSEEGIKI*LNQNCLTTKKS Trigger: TGACTTTTTCGTTGTCAGGCAATTTTGGTTAAGTCAAATCTTAATGCCCTCTTCGCTATCAGATGTTGCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CAA 90 bp | ATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTATTTACCAAAATCAGCATTTaGCTTTATGGAAACACAGGC | + |
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Preference number: 3 (lower is better) Translates to: MFTYLWRHQQEPANHCLFTKISI*LYGNTG Trigger: GCCTGTGTTTCCATAAAGCAAAATGCTGATTTTGGT...AAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CAA 90 bp | TGCTCATCCTTGAGTTTAAAAAGTCTAACAAAATCTAAGAACCCGGGTTCCTTTACCAAAATCAGCATTTaGCTTTATGGAAACACAGGC | + |
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Preference number: 3 (lower is better) Translates to: CSSLSLKSLTKSKNPGSFTKISI*LYGNTG Trigger: GCCTGTGTTTCCATAAAGCAAAATGCTGATTTTGGT...AAAGGAACCCGGGTTCTTAGATTTTGTTAGACTTTTTAAACTCAAGGATGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR TCA 72 bp | AAGAGGGCATTAAGATTTGACTTAACCAAAATTGCCTaGCAACGAAAAAGTCATTTCATCATTCTGCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: KRALRFDLTKIA*QRKSHFIILLG Trigger: GCCAAGCAGAATGATGAAATGACTTTTTCGTTGTCAGGCAATTTTGGTTAAGTCAAATCTTAATGCCCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR CCA 72 bp | TTTATTTACATAATGTATCTCCCATGGAGACCTATTTaGCTTACCACTCTTCATAGGCCTAGTACAATCTCA | + |
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Preference number: 3 (lower is better) Translates to: FIYIMYLPWRPI*LTTLHRPSTIS Trigger: TGAGATTGTACTAGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAGATACATTATGTAAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR-3UTR CAA 90 bp | CTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTATTTATTTACATAATCCTATGCTTCTTTTCTaGTTCCATGAATCCGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LVETPTGTSKPLFIYLHNPMLLF*FHESVK Trigger: TTTCACGGATTCATGGAACAAGAAAAGAAGCATAGG...ATTATGTAAATAAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | ATGCTTCTTTTCTTGTTCCATGAATCCGTGAAAGTCTGCAGATCCTCCCAGCTCTGTTCCATGAATCCGTaGAAGTCTGCAGATCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: MLLFLFHESVKVCRSSQLCSMNP*KSADPP Trigger: GGGAGGATCTGCAGACTTTCACGGATTCATGGAACA...GAGCTGGGAGGATCTGCAGACTTTCACGGATTCATGGAACAAGAAAAGAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| 3UTR CAA 72 bp | CTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTaGTGGAGACACCAACAGGAACCAGCAAACCATTGT | + |
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Preference number: 4 (lower is better) Translates to: LRTRVPLNMFTY*WRHQQEPANHC Trigger: ACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | CCTTTAAACATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGGACGAACACCACCTaGCTGAGTATATTCTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: PLNMFTYLWRHQQEPANHWTNTT*LSIFLH Trigger: ATGCAAGAATATACTCAGTCAGGTGGTGTTCGTCCA...ATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTTTAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | ATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTATTTTGTTCCATGAATCCGTaGAAGTCTGCAGATCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: MFTYLWRHQQEPANHCLFCSMNP*KSADPP Trigger: GGGAGGATCTGCAGACTTTCACGGATTCATGGAACA...AAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | AAATCTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTTGTGGAGACACCATCTTTTCTTGTTCCATaGATCCGTGAAAGTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: KSKNPGSFKHVYLLVETPSFLVP*IRESLQ Trigger: CTGCAGACTTTCACGGATTCATGGAACAAGAAAAGA...TGGTGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | CAAAATCTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTTGTGGAGACACTCTTTTCTTGTTCCATaGATCCGTGAAAGTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QNLRTRVPLNMFTYLWRHSFLVP*IRESLQ Trigger: CTGCAGACTTTCACGGATTCATGGAACAAGAAAAGA...GTGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | AAACATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTCAACTCCTAAAAGGCTaGAAGGTGGGTTTAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: KHVYLLVETPTGTSKPLFQLLKG*KVGLTV Trigger: AACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTG...AAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | ACAAAATCTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTTGTGGAGACACCATGGAGACCTATTTaGCTTACCACTCTTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: TKSKNPGSFKHVYLLVETPWRPI*LTTLHR Trigger: CCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGG...TGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | CTTAACCAAAATTGCCTGACAACGAAAAAGTCATTTCATCATTCTGCTTGGCAATGGACGAACACCACCTaGCTGAGTATATTCTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LNQNCLTTKKSFHHSAWQWTNTT*LSIFLH Trigger: ATGCAAGAATATACTCAGTCAGGTGGTGTTCGTCCA...TTGCCAAGCAGAATGATGAAATGACTTTTTCGTTGTCAGGCAATTTTGGTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | TGCTCATCCTTGAGTTTAAAAAGTCTAACAAAATCTAAGAACCCGGGTTCCTTTACCCTAGGATTTCACTaGTCAATACCTAATGGCACC | + |
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Preference number: 4 (lower is better) Translates to: CSSLSLKSLTKSKNPGSFTLGFH*SIPNGT Trigger: GGTGCCATTAGGTATTGATCAGTGAAATCCTAGGGT...AAAGGAACCCGGGTTCTTAGATTTTGTTAGACTTTTTAAACTCAAGGATGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | ACAAAATCTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTTGTGGAGACACAACTCCTAAAAGGCTaGAAGGTGGGTTTAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: TKSKNPGSFKHVYLLVETQLLKG*KVGLTV Trigger: AACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTG...TGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | TGCTCATCCTTGAGTTTAAAAAGTCTAACAAAATCTAAGAACCCGGGTTCCTTTCCATGGAGACCTATTTaGCTTACCACTCTTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: CSSLSLKSLTKSKNPGSFPWRPI*LTTLHR Trigger: CCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGG...AAAGGAACCCGGGTTCTTAGATTTTGTTAGACTTTTTAAACTCAAGGATGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | TGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTATTTAATGTTTACCTACTTGTaGAGACACCAACAGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: CLPTCGDTNRNQQTIVYLMFTYL*RHQQEP Trigger: TGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACAT...TAAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTACATAATGTATCTCCCATGGAGACCTATTTGGCTTACCACTCTTCATTGGACGAACACCACCTaGCTGAGTATATTCTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: FIYIMYLPWRPIWLTTLHWTNTT*LSIFLH Trigger: ATGCAAGAATATACTCAGTCAGGTGGTGTTCGTCCA...ATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAGATACATTATGTAAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | CAACGAAAAAGTCATTTCATCATTCTGCTTGGCAATGTAGTCTTCAGAAATCAAACCCTAGGATTTCACTaGTCAATACCTAATGGCACC | + |
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Preference number: 4 (lower is better) Translates to: QRKSHFIILLGNVVFRNQTLGFH*SIPNGT Trigger: GGTGCCATTAGGTATTGATCAGTGAAATCCTAGGGT...TTGATTTCTGAAGACTACATTGCCAAGCAGAATGATGAAATGACTTTTTCGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | GATTTCACTGATCAATACCTAATGGCACCTAAAAGTACCTATGCTTCTTTTCTTACCCTAGGATTTCACTaGTCAATACCTAATGGCACC | + |
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Preference number: 4 (lower is better) Translates to: DFTDQYLMAPKSTYASFLTLGFH*SIPNGT Trigger: GGTGCCATTAGGTATTGATCAGTGAAATCCTAGGGT...AAGAAAAGAAGCATAGGTACTTTTAGGTGCCATTAGGTATTGATCAGTGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | CAACGAAAAAGTCATTTCATCATTCTGCTTGGCAATGTAGTCTTCAGAAATCAACCATGGAGACCTATTTaGCTTACCACTCTTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: QRKSHFIILLGNVVFRNQPWRPI*LTTLHR Trigger: CCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGG...TTGATTTCTGAAGACTACATTGCCAAGCAGAATGATGAAATGACTTTTTCGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | CTTAACCAAAATTGCCTGACAACGAAAAAGTCATTTCATCATTCTGCTTGGCAAATGTTTACCTACTTGTaGAGACACCAACAGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: LNQNCLTTKKSFHHSAWQMFTYL*RHQQEP Trigger: TGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACAT...TTGCCAAGCAGAATGATGAAATGACTTTTTCGTTGTCAGGCAATTTTGGTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR TCA 90 bp | CAACGAAAAAGTCATTTCATCATTCTGCTTGGCAATGTAGTCTTCAGAAATCAATCTTTTCTTGTTCCATaGATCCGTGAAAGTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QRKSHFIILLGNVVFRNQSFLVP*IRESLQ Trigger: CTGCAGACTTTCACGGATTCATGGAACAAGAAAAGA...TTGATTTCTGAAGACTACATTGCCAAGCAGAATGATGAAATGACTTTTTCGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | CAACGAAAAAGTCATTTCATCATTCTGCTTGGCAATGTAGTCTTCAGAAATCAACAACTCCTAAAAGGCTaGAAGGTGGGTTTAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: QRKSHFIILLGNVVFRNQQLLKG*KVGLTV Trigger: AACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTG...TTGATTTCTGAAGACTACATTGCCAAGCAGAATGATGAAATGACTTTTTCGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | TTTATTTACATAATGTATCTCCCATGGAGACCTATTTGGCTTACCACTCTTCATATGTTTACCTACTTGTaGAGACACCAACAGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: FIYIMYLPWRPIWLTTLHMFTYL*RHQQEP Trigger: TGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACAT...ATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAGATACATTATGTAAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | CTTAACCAAAATTGCCTGACAACGAAAAAGTCATTTCATCATTCTGCTTGGCAATTTCATCATTCTGCTTaGCAATGTAGTCTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LNQNCLTTKKSFHHSAWQFHHSA*QCSLQK Trigger: TTTCTGAAGACTACATTGCCAAGCAGAATGATGAAA...TTGCCAAGCAGAATGATGAAATGACTTTTTCGTTGTCAGGCAATTTTGGTTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CCA 90 bp | AAGTCATTTCATCATTCTGCTTGGCAATGTAGTCTTCAGAAATCAACTGTGATATTTCATCATTCTGCTTaGCAATGTAGTCTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: KSFHHSAWQCSLQKSTVIFHHSA*QCSLQK Trigger: TTTCTGAAGACTACATTGCCAAGCAGAATGATGAAA...TATCACAGTTGATTTCTGAAGACTACATTGCCAAGCAGAATGATGAAATGACTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CAA 90 bp | TACATAATGTATCTCCCATGGAGACCTATTTGGCTTACCACTCTTCATAGGCCTAACATGTTTACCTACTaGTGGAGACACCAACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: YIMYLPWRPIWLTTLHRPNMFTY*WRHQQE Trigger: TTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTT...AGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAGATACATTATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CAA 90 bp | TACATAATGTATCTCCCATGGAGACCTATTTGGCTTACCACTCTTCATAGGCCTCCTATGCTTCTTTTCTaGTTCCATGAATCCGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: YIMYLPWRPIWLTTLHRPPMLLF*FHESVK Trigger: TTTCACGGATTCATGGAACAAGAAAAGAAGCATAGG...AGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAGATACATTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CAA 90 bp | AAACATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTAACATGTTTACCTACTaGTGGAGACACCAACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: KHVYLLVETPTGTSKPLFNMFTY*WRHQQE Trigger: TTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTT...AAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CAA 90 bp | AACATGTTTACCTACTTGTGGAGACACCAACAGGAACCAGCAAACCATTGTTTAAACATGTTTACCTACTaGTGGAGACACCAACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: NMFTYLWRHQQEPANHCLNMFTY*WRHQQE Trigger: TTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTT...TAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CAA 90 bp | ACAAAATCTAAGAACCCGGGTTCCTTTAAACATGTTTACCTACTTGTGGAGACACCTATGCTTCTTTTCTaGTTCCATGAATCCGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: TKSKNPGSFKHVYLLVETPMLLF*FHESVK Trigger: TTTCACGGATTCATGGAACAAGAAAAGAAGCATAGG...TGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTACATAATGTATCTCCCATGGAGACCTATTTGGCTTACCACTCTTCATACCAAAATCAGCATTTaGCTTTATGGAAACACAGGC | + |
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Preference number: 5 (lower is better) Translates to: FIYIMYLPWRPIWLTTLHTKISI*LYGNTG Trigger: GCCTGTGTTTCCATAAAGCAAAATGCTGATTTTGGT...ATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAGATACATTATGTAAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS-3UTR CAA 90 bp | ATTTTAGCAACTCCTAAAAGGCTGGAAGGTGGGTTTAACAGTTTATTAGGATTTACCAAAATCAGCATTTaGCTTTATGGAAACACAGGC | + |
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Preference number: 5 (lower is better) Translates to: ILATPKRLEGGFNSLLGFTKISI*LYGNTG Trigger: GCCTGTGTTTCCATAAAGCAAAATGCTGATTTTGGT...AAATCCTAATAAACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTGCTAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000223321.9 ENST00000436986.5 ENST00000457444.6 |
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| CDS TCA 90 bp | CCATTTAAATCCAGGCCTAAGATTTTTAATAACCTTAACGTTACGTaGAAAATGTACTGTGAAGGCTCATCTGTTAAACGGAGTTACGAA | + |
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Preference number: 5 (lower is better) Translates to: PFKSRPKIFNNLNVT*KMYCEGSSVKRSYE Trigger: TTCGTAACTCCGTTTAACAGATGAGCCTTCACAGTACATTTTTCACGTAACGTTAAGGTTATTAAAAATCTTAGGCCTGGATTTAAATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411875.1 ENST00000677139.1 |
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| CDS CAA 90 bp | CTGCTACCTTCTGGAAAGGAAGATAAGAGGGCCTGTCATTTAGCTTaGGAAGCTCAGAGATGGAGTAACAACACTATCAAAGTTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLPSGKEDKRACHLA*EAQRWSNNTIKVPK Trigger: TTTGGGAACTTTGATAGTGTTGTTACTCCATCTCTGAGCTTCCAAAGCTAAATGACAGGCCCTCTTATCTTCCTTTCCAGAAGGTAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677578.1 ENST00000678407.1 |
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| CDS CAA 72 bp | GACAAGTTTACCAGACGGGCGATGACCTTAGACAAGTaGTTTAATTTGTACAAGCTGCGGTTAGTTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: DKFTRRAMTLDK*FNLYKLRLVHL Trigger: CAGATGAACTAACCGCAGCTTGTACAAATTAAACAACTTGTCTAAGGTCATCGCCCGTCTGGTAAACTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436986.5 |
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| CDS CAA 72 bp | TCTGGAAAGGAAGATAAGAGGGCCTGTCATTTAGCTTaGGAAGCTCAGAGATGGAGTAACAACACTATCAAA | + |
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Preference number: 6 (lower is better) Translates to: SGKEDKRACHLA*EAQRWSNNTIK Trigger: TTTGATAGTGTTGTTACTCCATCTCTGAGCTTCCAAAGCTAAATGACAGGCCCTCTTATCTTCCTTTCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677578.1 ENST00000678407.1 |
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| CDS CAA 90 bp | AGTAACACTGAGACTAGAATACAGCTGGAAATAAGTAAGAGCAGCTaGTACTTGGGCACCGACAGATTTTTACATAGTGCTCCACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SNTETRIQLEISKSS*YLGTDRFLHSAPLF Trigger: AAAAAGTGGAGCACTATGTAAAAATCTGTCGGTGCCCAAGTACAAGCTGCTCTTACTTATTTCCAGCTGTATTCTAGTCTCAGTGTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000411875.1 ENST00000677139.1 |
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| CDS GCA 72 bp | CCATTACAAACACCTTCTATTCAGATACCATTCTTCTaGATTAGAGCAGACAACTTACCCAAGGTACCAATT | + |
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Preference number: 6 (lower is better) Translates to: PLQTPSIQIPFF*IRADNLPKVPI Trigger: AATTGGTACCTTGGGTAAGTTGTCTGCTCTAATGCAGAAGAATGGTATCTGAATAGAAGGTGTTTGTAATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677578.1 ENST00000678407.1 |
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| CDS TCA 72 bp | TCCAGGCCTAAGATTTTTAATAACCTTAACGTTACGTaGAAAATGTACTGTGAAGGCTCATCTGTTAAACGG | + |
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Preference number: 6 (lower is better) Translates to: SRPKIFNNLNVT*KMYCEGSSVKR Trigger: CCGTTTAACAGATGAGCCTTCACAGTACATTTTTCACGTAACGTTAAGGTTATTAAAAATCTTAGGCCTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000411875.1 ENST00000677139.1 |
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| CDS TCA 72 bp | AGACAGATGTTTGAGGTAATGGATATCCAATTACCCTaGTTTGACACTGTATACAGGTATCAAAATATCACA | + |
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Preference number: 6 (lower is better) Translates to: RQMFEVMDIQLP*FDTVYRYQNIT Trigger: TGTGATATTTTGATACCTGTATACAGTGTCAAATCAGGGTAATTGGATATCCATTACCTCAAACATCTGTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000411875.1 ENST00000677139.1 |
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