Pregenerated sensors for PSKH2 (Homo sapiens)
Ensembl gene IDs: ENSG00000147613Ensembl transcript IDs: ENST00000276616.3, ENST00000517981.5, ENST00000523010.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTTCTCTATTTTTCCCGTaGATAATGCCCCAATTAGAC | + |
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Preference number: 2 (lower is better) Translates to: DQAICDLPRELSFETYPFSLFFP*IMPQLD Trigger: GTCTAATTGGGGCATTATTCACGGGAAAAATAGAGA...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| 3UTR TCA 72 bp | TCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTaGGGGTGCCCTAATCATGATGAAATGGTCCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: SNNTMESRVFGA*GCPNHDEMVLK Trigger: TTTTAGGACCATTTCATCATGATTAGGGCACCCTCAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| 3UTR-3UTR CAA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATGGAGTCCCGTGTCTTaGGAGCTTGAGGGTGCCCTA | + |
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Preference number: 3 (lower is better) Translates to: DLPRELSFETYPFIALPIWSPVS*ELEGAL Trigger: TAGGGCACCCTCAAGCTCCAAAGACACGGGACTCCA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCGCCACCTGTATCCTCTaGGCCGCCTGGGCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFATCIL*AAWAAA Trigger: GGCGGCGGCCCAGGCGGCGCAGAGGATACAGGTGGC...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTGGCCCAAGCCAGCGCTaGTGGCCCCGGGACCACCTT | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFGPSQR*WPRDHL Trigger: AAGGTGGTCCCGGGGCCACCAGCGCTGGCTTGGGCC...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GTCAAGATCAATAGTATCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTGCCCGGGGGTCGAACTTaGCTCGGAAGCGAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: VKINSIQQYHGVPCLWSLPGGRT*LGSEPP Trigger: AGGTGGCTCGCTTCCGAGCCAAGTTCGACCCCCGGG...CAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGATACTATTGATCTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCCCGGGACCACCTTCCTaGTGGCGCCGCACCCCATAC | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFPGPPS*WRRTPY Trigger: GTATGGGGTGCGGCGCCAGCAGGAAGGTGGTCCCGG...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTGGACCACCTTCCTGCTaGCGCCGCACCCCATACCCG | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFGPPSC*RRTPYP Trigger: CGGGTATGGGGTGCGGCGCCAGCAGGAAGGTGGTCC...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCCCAAGCCAGCGCTGGTaGCCCCGGGACCACCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFPSQRW*PRDHLP Trigger: AGGAAGGTGGTCCCGGGGCCACCAGCGCTGGCTTGG...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTGAGAGGCCCTCTGCATaGGGTTTCGGGATATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFERPSA*GFGIWP Trigger: GGGCCATATCCCGAAACCTCATGCAGAGGGCCTCTC...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTACGCCGGCTTGGTTTTaGCCTTCGTGCTTGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFTPAWF*PSCLAQ Trigger: TTGGGCCAAGCACGAAGGTCAAAACCAAGCCGGCGT...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GTCAAGATCAATAGTATCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTGCCAGCTGACATGCGATaGCCAGCCTCCAAAATCAGT | + |
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Preference number: 4 (lower is better) Translates to: VKINSIQQYHGVPCLWSLPADMR*PASKIS Trigger: ACTGATTTTGGAGGCTGGTCATCGCATGTCAGCTGG...CAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGATACTATTGATCTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATACAGGGCCTGGCCAGCTaGCATGCGATGACCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIQGLAS*HAMTSL Trigger: GAGGCTGGTCATCGCATGTCAGCTGGCCAGGCCCTG...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTTTTGACCTTCGTGCTTaGCCCAAGCCAGCGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFFDLRA*PKPALV Trigger: CACCAGCGCTGGCTTGGGCCAAGCACGAAGGTCAAA...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCCCATCAGCAACCATCTaGAGGATCCTGACGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFPSATI*RILTAS Trigger: GGATGCCGTCAGGATCCTCCAGATGGTTGCTGATGG...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAGTGATCACCCAGGGATaGTCCAGGGCCTGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIVITQG*SRAWPA Trigger: AGCTGGCCAGGCCCTGGACCATCCCTGGGTGATCAC...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GTCAAGATCAATAGTATCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTGCGGGATATGGCCCTCTaGAGATTCTTCATGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: VKINSIQQYHGVPCLWSLRDMAL*RFFMED Trigger: GTCTTCCATGAAGAATCTCCAGAGGGCCATATCCCG...CAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGATACTATTGATCTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCAGGATCCCTGAGCAATaGGTCGATCAAAGAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFRIPEQ*VDQRAP Trigger: GGGAGCTCTTTGATCGACTCATTGCTCAGGGATCCT...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTCTTCATGGAAGACCCTaGAGCCATGGTGATCACCCA | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFLHGRP*SHGDHP Trigger: TGGGTGATCACCATGGCTGCAGGGTCTTCCATGAAG...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GTCAAGATCAATAGTATCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTGACATGTCCACTGCACTaGTATAAGGCTTCCTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: VKINSIQQYHGVPCLWSLTCPLH*YKASLA Trigger: TGCTAAGGAAGCCTTATACCAGTGCAGTGGACATGT...CAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGATACTATTGATCTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCTCTGGAGATTCTTCATaGAAGACCCTGCAGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFSGDSS*KTLQPW Trigger: CCATGGCTGCAGGGTCTTCCATGAAGAATCTCCAGA...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATCGCCAAGTGGGAAATaGTTGGCCAAGGCTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPISPSGK*LAKALL Trigger: CAGGAGAGCCTTGGCCAAGCATTTCCCACTTGGCGA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATGGGGAGAGGCCCTCTaGATGAGGTTTCGGGATATG | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIWGEAL*MRFRDM Trigger: CATATCCCGAAACCTCATGCAGAGGGCCTCTCCCCA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTCAAGTGGGAAATGCTTaGCCAAGGCTCTCCTGTATA | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFQVGNA*PRLSCI Trigger: TATACAGGAGAGCCTTGGCCAAGCATTTCCCACTTG...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTTCTGTAAAGGATCCCTaGGCAATGAGTCGATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFSVKDP*AMSRSK Trigger: CTTTGATCGACTCATTGCTCAGGGATCCTTTACAGA...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GTCAAGATCAATAGTATCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTGGTTTACCCACACATATaGGTGACTCACAGATATGAT | + |
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Preference number: 4 (lower is better) Translates to: VKINSIQQYHGVPCLWSLVYPHI*VTHRYD Trigger: ATCATATCTGTGAGTCACTCATATGTGTGGGTAAAC...CAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGATACTATTGATCTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GTCAAGATCAATAGTATCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTGTCCTTAAGTTTCTCTTaGTCCACATATGCCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: VKINSIQQYHGVPCLWSLSLSFS*STYAWI Trigger: AATCCAGGCATATGTGGAGCAAGAGAAACTTAAGGA...CAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGATACTATTGATCTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAAAGTCCTTCGCCAAGTaGGAAATGCTTGGCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIKSFAK*EMLGQG Trigger: GCCTTGGCCAAGCATTTCCCACTTGGCGAAGGACTT...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCTTCCTGCTATGTCTCTaGTTCACCATGCCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFFLLCL*FTMPSH Trigger: ATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAA...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATACGTGTCTTTGGAGCTTaGGGGTGCCCTAATCATGAT | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIRVFGA*GCPNHD Trigger: ATCATGATTAGGGCACCCTCAAGCTCCAAAGACACG...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATTCTTGGTGGTCTTCTaGTCTACCCTGACAACCCTG | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIFLVVF*STLTTL Trigger: CAGGGTTGTCAGGGTAGAGCAGAAGACCACCAAGAA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTGTTATCTGCAGCGCATaGAAATACCTAATCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFVICSA*KYLIPS Trigger: TGATGGGATTAGGTATTTGCATGCGCTGCAGATAAC...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAAGCCCACATGTCCACTaGACTGGTATAAGGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPISPHVH*TGIRLP Trigger: AGGAAGCCTTATACCAGTGCAGTGGACATGTGGGCT...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAGGCTTTAGATTCCTATaGGTTATCTGCAGCGCATGC | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIGFRFL*VICSAC Trigger: GCATGCGCTGCAGATAACTCATAGGAATCTAAAGCC...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCGAAACCAGTACATACTaGAAAGAGTTGACAGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFETSTY*KELTVV Trigger: CACTACTGTCAACTCTTTTCAGTATGTACTGGTTTC...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCTACCTTCCCTCTCTCTaGTTTCCATCACTTTTATTG | + |
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Preference number: 4 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFYLPSL*FPSLLL Trigger: CAATAAAAGTGATGGAAACCAGAGAGAGGGAAGGTA...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTACCCACACATATGAGTaGCTCACAGATATGATTAAT | + |
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Preference number: 4 (lower is better) Translates to: DQAICDLPRELSFETYPFTHTYE*LTDMIN Trigger: ATTAATCATATCTGTGAGTCACTCATATGTGTGGGT...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATATCCAACAATACCATaGAGTCCCGTGTCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIYPTIP*SPVSLE Trigger: CTCCAAAGACACGGGACTCCATGGTATTGTTGGATA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATCTCAAAGATCTCCATaGGCTGGACAATGTAACGAT | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPISQRSP*AGQCND Trigger: ATCGTTACATTGTCCAGCTCATGGAGATCTTTGAGA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAGTTTTAGAGGTCATCTaGTTACAAAAGCGCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIVLEVI*LQKRRQ Trigger: CTGTCTGCGCTTTTGTAAGCAGATGACCTCTAAAAC...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR TCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATCTCTATTTTTCCCGTaGATAATGCCCCAATTAGAC | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPISLFFP*IMPQLD Trigger: GTCTAATTGGGGCATTATTCACGGGAAAAATAGAGA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATGCTCCACATATGCCTaGATTTGTGAGAATAATGTG | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPICSTYA*ICENNV Trigger: CACATTATTCTCACAAATCCAGGCATATGTGGAGCA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR GCA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAATATCTAACTATTCCTaGTATGTCTCTGGTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: DLPRELSFETYPFIALPIISNYS*YVSGSP Trigger: TGGTGAACCAGAGACATAGCAGGAATAGTTAGATAT...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS TCA 90 bp | ACTGTGCAGATCCAGGACTCTGAGAGTGGGGAGAGGCCCTCTGCATaGGGTTTCGGGATATGGCCCTCTGGAGATTCTTCATGGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: TVQIQDSESGERPSA*GFGIWPSGDSSWKT Trigger: GGTCTTCCATGAAGAATCTCCAGAGGGCCATATCCCGAAACCTCATGCAGAGGGCCTCTCCCCACTCTCAGAGTCCTGGATCTGCACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS TCA 90 bp | GTGATCACCCAGGGATGGTCCAGGGCCTGGCCAGCTGACATGCGATaGCCAGCCTCCAAAATCAGTAGTTTGTCTATAAAGTCCTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: VITQGWSRAWPADMR*PASKISSLSIKSFA Trigger: GGCGAAGGACTTTATAGACAAACTACTGATTTTGGAGGCTGGTCATCGCATGTCAGCTGGCCAGGCCCTGGACCATCCCTGGGTGATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | GTCAAGATCAATAGTATCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTGTGGAGTCCCGTGTCTTaGGAGCTTGAGGGTGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: VKINSIQQYHGVPCLWSLWSPVS*ELEGAL Trigger: TAGGGCACCCTCAAGCTCCAAAGACACGGGACTCCA...CAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGATACTATTGATCTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS CCA 90 bp | GGACGCTCAGCTCAGACACGCACGCTTCTCTACCTTCCCTCTCTCTaGTTTCCATCACTTTTATTGCAAAAGGTTTCTTGGTGGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRSAQTRTLLYLPSL*FPSLLLQKVSWWSS Trigger: AGAAGACCACCAAGAAACCTTTTGCAATAAAAGTGATGGAAACCAGAGAGAGGGAAGGTAGAGAAGCGTGCGTGTCTGAGCTGAGCGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000276616.3 ENST00000517981.5 ENST00000523010.1 |
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| CDS-3UTR CAA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAACCCGGGGGTCGAACTaGGCTCGGAAGCGAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: DLPRELSFETYPFIALPITRGSN*ARKRAT Trigger: GGTGGCTCGCTTCCGAGCCAAGTTCGACCCCCGGGT...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS GCA 90 bp | CTGGTTTCCATCACTTTTATTGCAAAAGGTTTCTTGGTGGTCTTCTaGTCTACCCTGACAACCCTGCTGAAACTGCCTGTCCCAATAAGA | + |
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Preference number: 5 (lower is better) Translates to: LVSITFIAKGFLVVF*STLTTLLKLPVPIR Trigger: TCTTATTGGGACAGGCAGTTTCAGCAGGGTTGTCAGGGTAGAGCAGAAGACCACCAAGAAACCTTTTGCAATAAAAGTGATGGAAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000276616.3 ENST00000517981.5 ENST00000523010.1 |
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| CDS-3UTR CAA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAGACGCCGGCTTGGTTTaGACCTTCGTGCTTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: DLPRELSFETYPFIALPIDAGLV*TFVLGP Trigger: TGGGCCAAGCACGAAGGTCAAAACCAAGCCGGCGTC...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATAGCCTCCGACGCCGGCTaGGTTTTGACCTTCGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: DLPRELSFETYPFIALPIASDAG*VLTFVL Trigger: AAGCACGAAGGTCAAAACCAAGCCGGCGTCGGAGGC...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCGTCCCAATAAGAGCTTaGATGTCATATCTGGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFVPIRA*MSYLAR Trigger: CCTTGCCAGATATGACATCAAAGCTCTTATTGGGAC...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | GTCAAGATCAATAGTATCCAACAATACCATGGAGTCCCGTGTCTTTGGAGCTTGTGTAAACCCTGGTGGTaGATGAATGCTAACATTAGA | + |
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Preference number: 5 (lower is better) Translates to: VKINSIQQYHGVPCLWSLCKPWW*MNANIR Trigger: TCTAATGTTAGCATTCATCAACCACCAGGGTTTACA...CAAGCTCCAAAGACACGGGACTCCATGGTATTGTTGGATACTATTGATCTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTTCTTCCTGTAAAGCCTaGTCTGGCTTTCATCATCAA | + |
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Preference number: 5 (lower is better) Translates to: DQAICDLPRELSFETYPFSSCKA*SGFHHQ Trigger: TTGATGATGAAAGCCAGACAAGGCTTTACAGGAAGA...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | GATCAGGCCATATGTGACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATCCTTAAGTTTCTCTaGCTCCACATATGCCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: DQAICDLPRELSFETYPFILKFL*LHICLD Trigger: ATCCAGGCATATGTGGAGCAAGAGAAACTTAAGGAT...AAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCTCCAAAATCAGTAGTTaGTCTATAAAGTCCTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFSKISS*SIKSFA Trigger: GGCGAAGGACTTTATAGACAAACTACTGATTTTGGA...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | TATTCCTGCTATGTCTCTGGTTCACCATGCCTTCACATATACATCCCTTATTTCCATTACCATGTAAACTaGATCCTCAGTCTCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: YSCYVSGSPCLHIYIPYFHYHVN*ILSLKD Trigger: ATCTTTGAGACTGAGGATCAAGTTTACATGGTAATG...GAAATAAGGGATGTATATGTGAAGGCATGGTGAACCAGAGACATAGCAGGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATACAGGCCATATGTGACTaGCCTAGAGAACTAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: DLPRELSFETYPFIALPIQAICD*PRELSF Trigger: AAAACTTAGTTCTCTAGGCAAGTCACATATGGCCTG...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS-3UTR CAA 90 bp | GACTTGCCTAGAGAACTAAGTTTTGAAACTTACCCCTTTATTGCATTACCTATATTTCCATCACTTTTATaGCAAAAGGTTTCTTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: DLPRELSFETYPFIALPIFPSLL*QKVSWW Trigger: CCACCAAGAAACCTTTTGCAATAAAAGTGATGGAAA...TATAGGTAATGCAATAAAGGGGTAAGTTTCAAAACTTAGTTCTCTAGGCAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS CCA 72 bp | GTTTTGACCTTCGTGCTTGGCCCAAGCCAGCGCTGGTaGCCCCGGGACCACCTTCCTGCTGGCGCCGCACCC | + |
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Preference number: 6 (lower is better) Translates to: VLTFVLGPSQRW*PRDHLPAGAAP Trigger: GGGTGCGGCGCCAGCAGGAAGGTGGTCCCGGGGCCACCAGCGCTGGCTTGGGCCAAGCACGAAGGTCAAAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS CCA 72 bp | TTGGTTTTGACCTTCGTGCTTGGCCCAAGCCAGCGCTaGTGGCCCCGGGACCACCTTCCTGCTGGCGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: LVLTFVLGPSQR*WPRDHLPAGAA Trigger: TGCGGCGCCAGCAGGAAGGTGGTCCCGGGGCCACCAGCGCTGGCTTGGGCCAAGCACGAAGGTCAAAACCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS CAA 90 bp | ATAAGAGCTTTGATGTCATATCTGGCAAGGACCCGGGGGTCGAACTaGGCTCGGAAGCGAGCCACCTGTATCCTCTGCGCCGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: IRALMSYLARTRGSN*ARKRATCILCAAWA Trigger: GGCCCAGGCGGCGCAGAGGATACAGGTGGCTCGCTTCCGAGCCAAGTTCGACCCCCGGGTCCTTGCCAGATATGACATCAAAGCTCTTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS CAA 72 bp | TTGATGTCATATCTGGCAAGGACCCGGGGGTCGAACTaGGCTCGGAAGCGAGCCACCTGTATCCTCTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LMSYLARTRGSN*ARKRATCILCA Trigger: GGCGCAGAGGATACAGGTGGCTCGCTTCCGAGCCAAGTTCGACCCCCGGGTCCTTGCCAGATATGACATCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS GCA 72 bp | GGATATGGCCCTCTGGAGATTCTTCATGGAAGACCCTaGAGCCATGGTGATCACCCAGGGATGGTCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GYGPLEILHGRP*SHGDHPGMVQG Trigger: GCCCTGGACCATCCCTGGGTGATCACCATGGCTGCAGGGTCTTCCATGAAGAATCTCCAGAGGGCCATATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS TCA 72 bp | CAGGGATGGTCCAGGGCCTGGCCAGCTGACATGCGATaGCCAGCCTCCAAAATCAGTAGTTTGTCTATAAAG | + |
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Preference number: 6 (lower is better) Translates to: QGWSRAWPADMR*PASKISSLSIK Trigger: CTTTATAGACAAACTACTGATTTTGGAGGCTGGTCATCGCATGTCAGCTGGCCAGGCCCTGGACCATCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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| CDS CCA 72 bp | AGCGCATGCAAATACCTAATCCCATCAGCAACCATCTaGAGGATCCTGACGGCATCCCGCTCTGTAAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SACKYLIPSATI*RILTASRSVKD Trigger: ATCCTTTACAGAGCGGGATGCCGTCAGGATCCTCCAGATGGTTGCTGATGGGATTAGGTATTTGCATGCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000276616.3 ENST00000517981.5 ENST00000523010.1 |
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| CDS CCA 72 bp | GACATTAGACCGGATCTCATTGCTTTAGCGGTAGAGTaGAGTGAGAAGGTGATGACCTCATTCTCCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: DIRPDLIALAVE*SEKVMTSFSPS Trigger: ACTTGGGGAGAATGAGGTCATCACCTTCTCACTCCACTCTACCGCTAAAGCAATGAGATCCGGTCTAATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523010.1 |
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| CDS CAA 90 bp | CCTTCCCTCTCTCTGGTTTCCATCACTTTTATTGCAAAAGGTTTCTaGGTGGTCTTCTGCTCTACCCTGACAACCCTGCTGAAACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PSLSLVSITFIAKGF*VVFCSTLTTLLKLP Trigger: AGGCAGTTTCAGCAGGGTTGTCAGGGTAGAGCAGAAGACCACCAAGAAACCTTTTGCAATAAAAGTGATGGAAACCAGAGAGAGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000276616.3 ENST00000517981.5 ENST00000523010.1 |
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| CDS CAA 72 bp | CTCTACCTTCCCTCTCTCTGGTTTCCATCACTTTTATaGCAAAAGGTTTCTTGGTGGTCTTCTGCTCTACCC | + |
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Preference number: 6 (lower is better) Translates to: LYLPSLWFPSLL*QKVSWWSSALP Trigger: GGGTAGAGCAGAAGACCACCAAGAAACCTTTTGCAATAAAAGTGATGGAAACCAGAGAGAGGGAAGGTAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000276616.3 ENST00000517981.5 ENST00000523010.1 |
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| CDS TCA 72 bp | CTTGCTCCACATATGCCTGGATTTGTGAGAATAATGTaGCTTAGAAGACTGTGCAGATCCAGGACTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LAPHMPGFVRIM*LRRLCRSRTLR Trigger: TCTCAGAGTCCTGGATCTGCACAGTCTTCTAAGTCACATTATTCTCACAAATCCAGGCATATGTGGAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276616.3 |
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