RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSKH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000159792

Ensembl transcript IDs: ENST00000291041.6, ENST00000570631.5, ENST00000575198.1

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGACCCTCCCCCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATaGAGGACTACAGGTGTGCACCATGGGTGGGTGTGCACGATGGGC +
Preference number: 1 (lower is better)
Translates to: GTLPQGGNSYLPMSS*RTTGVHHGWVCTMG
Trigger: GCCCATCGTGCACACCCACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGGGGGAGGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR GCA 90 bp TTCCCACTGGAGGTGGCACATGCAGGAAAAGGGCCTGGCCCAGGCTaGCGACCGGCAGAAGCTGAGTGGGAACCAAACCCTCCTGCAATG +
Preference number: 1 (lower is better)
Translates to: FPLEVAHAGKGPGPG*RPAEAEWEPNPPAM
Trigger: CATTGCAGGAGGGTTTGGTTCCCACTCAGCTTCTGCCGGTCGGCAGCCTGGGCCAGGCCCTTTTCCTGCATGTGCCACCTCCAGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR CCA 90 bp GGCAGTGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATaGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGG +
Preference number: 1 (lower is better)
Translates to: GSAPGTLVSEAGHTV*LSSREGCAEAQQKG
Trigger: CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR GCA 90 bp GTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGGGAGGGGTaGGCAGAAGCTCAGCAGAAGGGGAGAGGTGAGCAGCCCGGGACC +
Preference number: 1 (lower is better)
Translates to: VSEAGHTVWLSSREG*AEAQQKGRGEQPGT
Trigger: GGTCCCGGGCTGCTCACCTCTCCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR TCA 90 bp CCAAATAAACTATCTGCTCCCAAGTCCTTGTCTCAGGGCTCACCTTaGGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTT +
Preference number: 1 (lower is better)
Translates to: PNKLSAPKSLSQGSP*GNPNYILIVSLCPF
Trigger: AAAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCCTGAGACAAGGACTTGGGAGCAGATAGTTTATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
3UTR-3UTR GCA 90 bp TGGCAGGGGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTCAGGCTGGGTCGTGCTaGATGTGTGCACAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: WQGPCRQAKAKAGPWPHSQAGSC*MCAQPG
Trigger: GCCTGGCTGTGCACACATGCAGCACGACCCAGCCTG...AGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCCCCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp TGGCAGGGGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTTGGCACCACAGTGTGTaGCCAGGCTGGGTCGTGCTG +
Preference number: 2 (lower is better)
Translates to: WQGPCRQAKAKAGPWPHSWHHSV*PGWVVL
Trigger: CAGCACGACCCAGCCTGGCCACACACTGTGGTGCCA...AGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCCCCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp GTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTGAAGGCAGCGGCCAGGCTGGGTCGTaGTGCATGTGTGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: VKLRPKLGPGPILPTEGSGQAGS*CMCAQP
Trigger: TGGCTGTGCACACATGCAGCACGACCCAGCCTGGCC...GCTGCCTTCAGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp GGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTAGTTCCAGGGAGGGGTaGGCAGAAGCTCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: GPAVKLRPKLGPGPILPTSSREG*AEAQQK
Trigger: CTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACT...AGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp CTCAGGACCAGGCCCACCCTGGGCAAGAGAGAACGTAAGCCCCAGGGCTTCAGGAGAATCTGGAGAGGCTaGAGCCTGGGCAAGCCGATG +
Preference number: 2 (lower is better)
Translates to: LRTRPTLGKRERKPQGFRRIWRG*SLGKPM
Trigger: CATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCT...CCTGAAGCCCTGGGGCTTACGTTCTCTCTTGCCCAGGGTGGGCCTGGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR TCA 90 bp CCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGGTGTGCACGATGCACAGTCCAGAAGGGTaGAGGTCCACGCCATGGCCC +
Preference number: 2 (lower is better)
Translates to: PMSSWRTTGVHHGWVCTMHSPEG*RSTPWP
Trigger: GGGCCATGGCGTGGACCTTCACCCTTCTGGACTGTG...CATCGTGCACACCCACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp CACACAGTATGGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGGCTCCACCAGAGGTCCTaGGACCAGGAAGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: HTVWLSSREGCAEAQQKGLHQRS*DQEGSL
Trigger: CAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAG...CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp CTCAGGACCAGGCCCACCCTGGGCAAGAGAGAACGTAAGCCCCAGGGCTTCAGGAAGGCACAAGCTTTGTaGCTACCAGGGTCTCCCACT +
Preference number: 2 (lower is better)
Translates to: LRTRPTLGKRERKPQGFRKAQAL*LPGSPT
Trigger: AGTGGGAGACCCTGGTAGGCACAAAGCTTGTGCCTT...CCTGAAGCCCTGGGGCTTACGTTCTCTCTTGCCCAGGGTGGGCCTGGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCAGCGCCTTCGTGCAGCTaGAGAGGAGGGAGCAACAGA +
Preference number: 2 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCAAPSCS*RGGSNR
Trigger: TCTGTTGCTCCCTCCTCTGCAGCTGCACGAAGGCGC...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCAGGCATCGGACCCAGATaGCACCACAGTGTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCAGIGPR*HHSVWP
Trigger: TGGCCACACACTGTGGTGCCATCTGGGTCCGATGCC...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp CGGTGGGCTGAGACCCCTCAGAATCTGGAGAGGCTGGAGCCTGGGCAAGCCGATGCACAGAGAAAGGGCTaGAGCCAGACATTCTTCACC +
Preference number: 2 (lower is better)
Translates to: RWAETPQNLERLEPGQADAQRKG*SQTFFT
Trigger: GGTGAAGAATGTCTGGCTCCAGCCCTTTCTCTGTGC...ATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCTGAGGGGTCTCAGCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp CACACAGTATGGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGGGGAGGACTACAGGTGTaGACCATGGGTGGGTGTGCA +
Preference number: 2 (lower is better)
Translates to: HTVWLSSREGCAEAQQKGGGLQV*TMGGCA
Trigger: TGCACACCCACCCATGGTGCACACCTGTAGTCCTCC...CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR TCA 90 bp AAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCCAACCCGGGAGCAACAGAGCCTaGAGGGAAAAGGCAATGGGG +
Preference number: 2 (lower is better)
Translates to: KEMGMVLAQASGKAATQPGSNRA*REKAMG
Trigger: CCCCATTGCCTTTTCCCTTCAGGCTCTGTTGCTCCC...GGGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGCTCCACCAGAGCAGCTaGCCACCAAGAGGGGTATCA +
Preference number: 2 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQLHQSS*PPRGVS
Trigger: TGATACCCCTCTTGGTGGGCAGCTGCTCTGGTGGAG...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp CAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGGCTGCCAACACCCATaGAGACACCAGATGGCGCCT +
Preference number: 2 (lower is better)
Translates to: QLLPSHVLMEDYRCAPWVGCQHP*RHQMAP
Trigger: AGGCGCCATCTGGTGTCTGCATGGGTGTTGGCAGCC...CACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp CAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGAGTGTGTGGCCAGGCTaGGTCGTGCTGCATGTGTGC +
Preference number: 2 (lower is better)
Translates to: QLLPSHVLMEDYRCAPWVSVWPG*VVLHVC
Trigger: GCACACATGCAGCACGACCCAGCCTGGCCACACACT...CACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp GGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTAAGGATCAGGATGCATaGGAATGTGTGAAACCAGGG +
Preference number: 2 (lower is better)
Translates to: GPAVKLRPKLGPGPILPTKDQDA*ECVKPG
Trigger: CCCTGGTTTCACACATTCCCATGCATCCTGATCCTT...AGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp ACCACAAAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCAGGCACCAAGGGCGGTaGGCTGAGACCCCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: TTKEMGMVLAQASGKAATRHQGR*AETPQN
Trigger: ATTCTGAGGGGTCTCAGCCCACCGCCCTTGGTGCCT...GGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTTTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR TCA 90 bp CCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGGTGTGCACGATGATGCATGGGAATGTGTaGAACCAGGGAGAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: PMSSWRTTGVHHGWVCTMMHGNV*NQGEGL
Trigger: GAGCCCTTCTCCCTGGTTTCACACATTCCCATGCAT...CATCGTGCACACCCACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR TCA 90 bp CACCAAAGGATAGAACCCAGGCTGACACTCGACCCTAATCGGGAGGACCCCCTTTCCCTGGAGGCACCATaGAGGAAGACAGATCTTGGC +
Preference number: 2 (lower is better)
Translates to: HQRIEPRLTLDPNREDPLSLEAP*RKTDLG
Trigger: GCCAAGATCTGTCTTCCTTCATGGTGCCTCCAGGGA...AAGGGGGTCCTCCCGATTAGGGTCGAGTGTCAGCCTGGGTTCTATCCTTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACCAGATGGCGCCTTCGTaGAGCTGCAGAGGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHQMAPS*SCRGGS
Trigger: GCTCCCTCCTCTGCAGCTGCACGAAGGCGCCATCTG...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp AAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCCAACCCACCTGGGGAATGGAATaGACATCCAACGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: KEMGMVLAQASGKAATQPTWGME*TSNGER
Trigger: CCTCTCCCCGTTGGATGTCCATTCCATTCCCCAGGT...GGGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACTCTGGCTCAGGCCTCTaGGAAAGCAGCCACCCAACC +
Preference number: 2 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHSGSGL*ESSHPT
Trigger: GGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGA...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR GCA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAAGGAACCAAACCCTCCTaGAATGGCAGGGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKGTKPS*NGRGPA
Trigger: GGCAGGGCCCCTGCCATTGCAGGAGGGTTTGGTTCC...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR TCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGCACTGCAGTTCCCTTTaGTTGGGGAAAAGTCAAAGG +
Preference number: 2 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQHCSSL*LGKSQR
Trigger: CCTTTGACTTTTCCCCAATCAAAGGGAACTGCAGTG...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCAGCAGTTCCCTTTGATTaGGGAAAAGTCAAAGGGCAA +
Preference number: 2 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCAAVPFD*GKVKGQ
Trigger: TTGCCCTTTGACTTTTCCCCAATCAAAGGGAACTGC...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACGCAGGTCACACAGTATaGCTAAGTTCCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHAGHTV*LSSREG
Trigger: CCCCTCCCTGGAACTTAGCCATACTGTGTGACCTGC...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CCA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAAAAATGGGGATGGTTCTaGCTCAGGCCTCTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKKWGWF*LRPLGK
Trigger: CTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTT...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR CCA 72 bp GGGCCTGGCCCAGGCTGCCGACCGGCAGAAGCTGAGTaGGAACCAAACCCTCCTGCAATGGCAGGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: GPGPGCRPAEAE*EPNPPAMAGAL
Trigger: CAGGGCCCCTGCCATTGCAGGAGGGTTTGGTTCCCACTCAGCTTCTGCCGGTCGGCAGCCTGGGCCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CAA 90 bp AGGTCCACGCCATGGCCCTCCACCAGAGGTCCTGGGACCAGGAAGGCTCCCTGGGAAGGAAGACAGATCTaGGCTGGGAGGTGGAGGGCT +
Preference number: 3 (lower is better)
Translates to: RSTPWPSTRGPGTRKAPWEGRQI*AGRWRA
Trigger: AGCCCTCCACCTCCCAGCCAAGATCTGTCTTCCTTC...CCAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAGGGCCATGGCGTGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR CCA 72 bp AGAGAGGGCATCGGACCCAGATGGCACCACAGTGTGTaGCCAGGCTGGGTCGTGCTGCATGTGTGCACAGCC +
Preference number: 3 (lower is better)
Translates to: REGIGPRWHHSV*PGWVVLHVCTA
Trigger: GGCTGTGCACACATGCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR CCA 72 bp CCCCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATaGAGGACTACAGGTGTGCACCATGGGTGGGTGTGC +
Preference number: 3 (lower is better)
Translates to: PQGGNSYLPMSS*RTTGVHHGWVC
Trigger: GCACACCCACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR GCA 72 bp GCAGGTCACACAGTATGGCTAAGTTCCAGGGAGGGGTaGGCAGAAGCTCAGCAGAAGGGGAGAGGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: AGHTVWLSSREG*AEAQQKGRGEQ
Trigger: CTGCTCACCTCTCCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR CCA 72 bp CCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATaGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAG +
Preference number: 3 (lower is better)
Translates to: PGTLVSEAGHTV*LSSREGCAEAQ
Trigger: CTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CAA 90 bp CAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGTCAAGGCACAAGCTTaGTGCCTACCAGGGTCTCCC +
Preference number: 3 (lower is better)
Translates to: QLLPSHVLMEDYRCAPWVVKAQA*CLPGSP
Trigger: GGGAGACCCTGGTAGGCACAAAGCTTGTGCCTTGAC...CACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR-3UTR CAA 90 bp CAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGCACTGCAGTTCCCTTaGATTGGGGAAAAGTCAAAG +
Preference number: 3 (lower is better)
Translates to: QLLPSHVLMEDYRCAPWVALQFP*IGEKSK
Trigger: CTTTGACTTTTCCCCAATCAAAGGGAACTGCAGTGC...CACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
3UTR CCA 72 bp GCTCTTTGGTGGTACAACTATGAGGCACATTCCACATaGTTATTACCAAGGTTCCCAGTGGCCCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: ALWWYNYEAHST*LLPRFPVAHSG
Trigger: GCCACTGTGGGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCACCAAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
3UTR CCA 72 bp AGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTaGCCCACAGTGGCAGTCCATTTCTCAATATACTCT +
Preference number: 3 (lower is better)
Translates to: RHIPHGYYQGSQ*PTVAVHFSIYS
Trigger: AGAGTATATTGAGAAATGGACTGCCACTGTGGGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
3UTR-3UTR CAA 90 bp TGGCCCACAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCTCTGATAGTCTCACTTaGTCCCTTTTATATGACCTG +
Preference number: 3 (lower is better)
Translates to: WPTVAVHFSIYSTDFLPSSDSLT*SLLYDL
Trigger: CAGGTCATATAAAAGGGACAAAGTGAGACTATCAGA...GGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTGTGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
3UTR-3UTR CAA 90 bp TCCCACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTGTCTCAGGGCTCACCTaGAGGGAACCCAAACTACAT +
Preference number: 3 (lower is better)
Translates to: SHSFTFSYSNHIPNKLSAVSGLT*REPKLH
Trigger: ATGTAGTTTGGGTTCCCTCAAGGTGAGCCCTGAGAC...AGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCGCTGGTAGCGCAGGTTaGGCTCCCGCAGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCAGSAG*APAAPV
Trigger: AACGGGAGCTGCGGGAGCTCAACCTGCGCTACCAGC...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp AGGTCCACGCCATGGCCCTCCACCAGAGGTCCTGGGACCAGGAAGGCTCCCTGGGGGTGCCTCAGGGCCTaGAGTGCAGTCATACGGGCT +
Preference number: 4 (lower is better)
Translates to: RSTPWPSTRGPGTRKAPWGCLRA*SAVIRA
Trigger: AGCCCGTATGACTGCACTGCAGGCCCTGAGGCACCC...CCAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAGGGCCATGGCGTGGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp AGGTCCACGCCATGGCCCTCCACCAGAGGTCCTGGGACCAGGAAGGCTCCCTGGTTCTCCACTGCCTCCTaGCCAGGGGGCATTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSTPWPSTRGPGTRKAPWFSTAS*PGGIGD
Trigger: GTCCCCAATGCCCCCTGGGCAGGAGGCAGTGGAGAA...CCAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAGGGCCATGGCGTGGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCCACAGTCCAGAAGGGTaGAGGTCCACGCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCHSPEG*RSTPWP
Trigger: GGGCCATGGCGTGGACCTTCACCCTTCTGGACTGTG...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp GGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCACCAAGGGCGGTGGGCTaGGACCCCTCAGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: GHRTQMAPQCVARLGRAAPRAVG*DPSESG
Trigger: TCCAGATTCTGAGGGGTCTCAGCCCACCGCCCTTGG...TGCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCATTGCCCCTGAGGATCTaGCGGTACAGCCGGGTACGG +
Preference number: 4 (lower is better)
Translates to: GHRTQMAPQCVARLGRAALPLRI*RYSRVR
Trigger: CCGTACCCGGCTGTACCGGCAGATCCTCAGGGGCAA...TGCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp TGGCAGGGGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTCAGATGGCGCCTTCGTaGAGCTGCAGAGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: WQGPCRQAKAKAGPWPHSQMAPS*SCRGGS
Trigger: GCTCCCTCCTCTGCAGCTGCACGAAGGCGCCATCTG...AGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCCCCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCTGGCACCACAGTGTGTaGCCAGGCTGGGTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCWHHSV*PGWVVL
Trigger: CAGCACGACCCAGCCTGGCCACACACTGTGGTGCCA...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp GGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCACTCCACCAGAGGTCCTaGGACCAGGAAGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GHRTQMAPQCVARLGRAALHQRS*DQEGSL
Trigger: CAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAG...TGCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CTCAGGACCAGGCCCACCCTGGGCAAGAGAGAACGTAAGCCCCAGGGCTTCAGGCCCTTCCCTCTGCCTTaGCCCCCAGGTGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: LRTRPTLGKRERKPQGFRPFPLP*PPGAPF
Trigger: GAATGGGGCACCTGGGGGCCAAGGCAGAGGGAAGGG...CCTGAAGCCCTGGGGCTTACGTTCTCTCTTGCCCAGGGTGGGCCTGGTCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp AGGTCCACGCCATGGCCCTCCACCAGAGGTCCTGGGACCAGGAAGGCTCCCTGGAACTGTACTTGCCCCTaGGGATCTGCCGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: RSTPWPSTRGPGTRKAPWNCTCP*GSAGTA
Trigger: GGCTGTACCGGCAGATCCTCAGGGGCAAGTACAGTT...CCAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAGGGCCATGGCGTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp CGGTGGGCTGAGACCCCTCAGAATCTGGAGAGGCTGGAGCCTGGGCAAGCCGATGGGCTCCTTCCAGCTTaGGGCTCAGTGGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: RWAETPQNLERLEPGQADGLLPA*GSVGPR
Trigger: TCTGGGTCCCACTGAGCCTCAAGCTGGAAGGAGCCC...ATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCTGAGGGGTCTCAGCCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CGGTGGGCTGAGACCCCTCAGAATCTGGAGAGGCTGGAGCCTGGGCAAGCCGATGGCCAGGCTGGGTCGTaGTGCATGTGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: RWAETPQNLERLEPGQADGQAGS*CMCAQP
Trigger: TGGCTGTGCACACATGCAGCACGACCCAGCCTGGCC...ATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCTGAGGGGTCTCAGCCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGGTGTGCACGATGGAGGGAGGCTCCGTGTaGCCAGCAGTCGGGGGACCG +
Preference number: 4 (lower is better)
Translates to: PMSSWRTTGVHHGWVCTMEGGSV*PAVGGP
Trigger: CGGTCCCCCGACTGCTGGCCACACGGAGCCTCCCTC...CATCGTGCACACCCACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp AGGTCCACGCCATGGCCCTCCACCAGAGGTCCTGGGACCAGGAAGGCTCCCTGGAGGAGCCCTTGGCAATaGTGCGGTCAAAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RSTPWPSTRGPGTRKAPWRSPWQ*CGQRAL
Trigger: GAGAGCTCTTTGACCGCATCATTGCCAAGGGCTCCT...CCAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAGGGCCATGGCGTGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCGGGAGCAACAGAGCCTaGAGGGAAAAGGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCGSNRA*REKAMG
Trigger: CCCCATTGCCTTTTCCCTTCAGGCTCTGTTGCTCCC...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CTCAGGACCAGGCCCACCCTGGGCAAGAGAGAACGTAAGCCCCAGGGCTTCAGGATGAAGAGGCAGCCATaGTCACCACCCACGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRTRPTLGKRERKPQGFRMKRQP*SPPTGA
Trigger: GGCACCCGTGGGTGGTGAGCATGGCTGCCTCTTCAT...CCTGAAGCCCTGGGGCTTACGTTCTCTCTTGCCCAGGGTGGGCCTGGTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCAGGAGGACTACAGGTGTaGACCATGGGTGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GHRTQMAPQCVARLGRAAGGLQV*TMGGCA
Trigger: TGCACACCCACCCATGGTGCACACCTGTAGTCCTCC...TGCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CACCAAAGGATAGAACCCAGGCTGACACTCGACCCTAATCGGGAGGACCCCCTTGGGCCTGGCCCAGGCTaGCGACCGGCAGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HQRIEPRLTLDPNREDPLGPGPG*RPAEAE
Trigger: CTCAGCTTCTGCCGGTCGGCAGCCTGGGCCAGGCCC...AAGGGGGTCCTCCCGATTAGGGTCGAGTGTCAGCCTGGGTTCTATCCTTTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCGCGGACCAGGACTTCTaGGGCAATGTACTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCADQDF*GNVLRR
Trigger: ACGCCTGAGTACATTGCCCCAGAAGTCCTGGTCCGC...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp GGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTAGGCACCAAGGGCGGTaGGCTGAGACCCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GPAVKLRPKLGPGPILPTRHQGR*AETPQN
Trigger: ATTCTGAGGGGTCTCAGCCCACCGCCCTTGGTGCCT...AGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp TGGCAGGGGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTCATGCAGACACCAGATaGCGCCTTCGTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WQGPCRQAKAKAGPWPHSHADTR*RLRAAA
Trigger: TGCAGCTGCACGAAGGCGCCATCTGGTGTCTGCATG...AGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCCCCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp CGGTGGGCTGAGACCCCTCAGAATCTGGAGAGGCTGGAGCCTGGGCAAGCCGATTGGATGATGTTGGCATaGCGCACCCGACGCAGCACA +
Preference number: 4 (lower is better)
Translates to: RWAETPQNLERLEPGQADWMMLA*RTRRST
Trigger: TGTGCTGCGTCGGGTGCGTCATGCCAACATCATCCA...ATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCTGAGGGGTCTCAGCCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp AAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCCAACCCGCGTCTCGGCGGCTCTaGCGGCCATCTCCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: KEMGMVLAQASGKAATQPASRRL*RPSPGN
Trigger: ATTGCCCGGAGATGGCCGGCAGAGCCGCCGAGACGC...GGGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCAGTTGGTGTATGGCTTaGGGACCAGGACTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCSWCMA*GPGLLG
Trigger: CCCCAGAAGTCCTGGTCCGCAAGCCATACACCAACT...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTGAAGGCAGCGTCGTGCTGCATGTGTaGACAGCCAGGCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VKLRPKLGPGPILPTEGSVVLHV*TARRLS
Trigger: GCTGAGCCGCCTGGCTGTGCACACATGCAGCACGAC...GCTGCCTTCAGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp AGGTCCACGCCATGGCCCTCCACCAGAGGTCCTGGGACCAGGAAGGCTCCCTGGCAGGCGTGCCACAGGTaGTCTTCATCAAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RSTPWPSTRGPGTRKAPWQACHR*SSSSSH
Trigger: ATGACTGCTTGATGAAGACCACCTGTGGCACGCCTG...CCAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAGGGCCATGGCGTGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CGGTGGGCTGAGACCCCTCAGAATCTGGAGAGGCTGGAGCCTGGGCAAGCCGATCCGGCAGAAGCTGAGTaGGAACCAAACCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RWAETPQNLERLEPGQADPAEAE*EPNPPA
Trigger: TGCAGGAGGGTTTGGTTCCCACTCAGCTTCTGCCGG...ATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCTGAGGGGTCTCAGCCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCATGGCAGGACCTGCTCTaGAGGCAGTGCCCCGTCTAC +
Preference number: 4 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCAWQDLL*RQCPVY
Trigger: GTAGACGGGGCACTGCCTTCAGAGCAGGTCCTGCCA...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCATGCATGGGAATGTGTaGAACCAGGGAGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCMHGNV*NQGEGL
Trigger: GAGCCCTTCTCCCTGGTTTCACACATTCCCATGCAT...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp GGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTTCCCTGGAGGCACCATaGAGGAAGACAGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: GPAVKLRPKLGPGPILPTSLEAP*RKTDLG
Trigger: GCCAAGATCTGTCTTCCTTCATGGTGCCTCCAGGGA...AGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp CACACAGTATGGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGGCCGACCGGCAGAAGCTaGGTGGGAACCAAACCCTCC +
Preference number: 4 (lower is better)
Translates to: HTVWLSSREGCAEAQQKGPTGRS*VGTKPS
Trigger: GGAGGGTTTGGTTCCCACTCAGCTTCTGCCGGTCGG...CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCATGCCGGGTTGCCCGGTaGTCTACACGTACCACTCGG +
Preference number: 4 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCACRVAR*STRTTR
Trigger: CCGAGTGGTACGTGTAGAGCACCGGGCAACCCGGCA...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp TCCTGCCCAGGGGGCATTGGGGACGGTAGGAGGATGTGTCTAAGGCATAGTCGACCATCCAGCACCATCTaGAGCACCCGCGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SCPGGIGDGRRMCLRHSRPSSTI*STRVAS
Trigger: TGACGCCACGCGGGTGCTGCAGATGGTGCTGGATGG...TCGACTATGCCTTAGACACATCCTCCTACCGTCCCCAATGCCCCCTGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTGAAGGCAGCCACCATGGGTGGGTGTaGACGATGGGCAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: VKLRPKLGPGPILPTEGSHHGWV*TMGRCA
Trigger: TGCACACCTGCCCATCGTGCACACCCACCCATGGTG...GCTGCCTTCAGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCAGGAACCAAACCCTCCTaGAATGGCAGGGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCAGTKPS*NGRGPA
Trigger: GGCAGGGCCCCTGCCATTGCAGGAGGGTTTGGTTCC...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp TCCTGCCCAGGGGGCATTGGGGACGGTAGGAGGATGTGTCTAAGGCATAGTCGAGGCTTGGTTCTCCACTaGCTCCTGCCCAGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SCPGGIGDGRRMCLRHSRGLVLH*LLPRGH
Trigger: ATGCCCCCTGGGCAGGAGGCAGTGGAGAACCAAGCC...TCGACTATGCCTTAGACACATCCTCCTACCGTCCCCAATGCCCCCTGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp GTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTGAAGGCAGCAGTGTGTGGCCAGGCTaGGTCGTGCTGCATGTGTGC +
Preference number: 4 (lower is better)
Translates to: VKLRPKLGPGPILPTEGSSVWPG*VVLHVC
Trigger: GCACACATGCAGCACGACCCAGCCTGGCCACACACT...GCTGCCTTCAGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp GGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTACCTGGGGAATGGAATaGACATCCAACGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GPAVKLRPKLGPGPILPTTWGME*TSNGER
Trigger: CCTCTCCCCGTTGGATGTCCATTCCATTCCCCAGGT...AGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGGGAAGCAGCACAGGGTaGACGGGGCAAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQGSSTG*TGQGQL
Trigger: CAGCTGGCCTTGCCCCGTCCACCCTGTGCTGCTTCC...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACTGGGAACCCGGCTTTaGCAGGGCCAACACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCALGTRL*QGQHCP
Trigger: TGGACAGTGTTGGCCCTGTCAAAGCCGGGTTCCCAG...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp TCCTGCCCAGGGGGCATTGGGGACGGTAGGAGGATGTGTCTAAGGCATAGTCGAACTGGGCAGATTTGGTaGTCTGGCAGCGCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SCPGGIGDGRRMCLRHSRTGQIW*SGSARR
Trigger: CCTCCTCGCGCTGCCAGAGCACCAAATCTGCCCAGT...TCGACTATGCCTTAGACACATCCTCCTACCGTCCCCAATGCCCCCTGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTGAAGGCAGCAGTTCCAGGGAGGGGTaGGCAGAAGCTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VKLRPKLGPGPILPTEGSSSREG*AEAQQK
Trigger: CTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACT...GCTGCCTTCAGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CGGTGGGCTGAGACCCCTCAGAATCTGGAGAGGCTGGAGCCTGGGCAAGCCGATCTTCCCATGTCCTCATaGAGGACTACAGGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RWAETPQNLERLEPGQADLPMSS*RTTGVH
Trigger: GTGCACACCTGTAGTCCTCCATGAGGACATGGGAAG...ATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCTGAGGGGTCTCAGCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CACACAGTATGGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGGTCTGGCTCAGGCCTCTaGGAAAGCAGCCACCCAACC +
Preference number: 4 (lower is better)
Translates to: HTVWLSSREGCAEAQQKGSGSGL*ESSHPT
Trigger: GGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGA...CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CTCAGGACCAGGCCCACCCTGGGCAAGAGAGAACGTAAGCCCCAGGGCTTCAGGAAATGGGGATGGTTCTaGCTCAGGCCTCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LRTRPTLGKRERKPQGFRKWGWF*LRPLGK
Trigger: CTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTT...CCTGAAGCCCTGGGGCTTACGTTCTCTCTTGCCCAGGGTGGGCCTGGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACCCTGCGTGGTGGTTCTaGGGGAGGCTCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHPAWWF*GRLRVA
Trigger: GGCCACACGGAGCCTCCCTCAGAACCACCACGCAGG...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACGCCCACATGTCCACTaGGTTGGTGTATGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCARPHVH*VGVWLA
Trigger: CGCAAGCCATACACCAACTCAGTGGACATGTGGGCG...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CACCAAAGGATAGAACCCAGGCTGACACTCGACCCTAATCGGGAGGACCCCCTTATACGGCTGCCGGGTTaGCCGGTGCTCTACACGTAC +
Preference number: 4 (lower is better)
Translates to: HQRIEPRLTLDPNREDPLIRLPG*PVLYTY
Trigger: GTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTAT...AAGGGGGTCCTCCCGATTAGGGTCGAGTGTCAGCCTGGGTTCTATCCTTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp TCCTGCCCAGGGGGCATTGGGGACGGTAGGAGGATGTGTCTAAGGCATAGTCGACTCCACCAGAGCAGCTaGCCACCAAGAGGGGTATCA +
Preference number: 4 (lower is better)
Translates to: SCPGGIGDGRRMCLRHSRLHQSS*PPRGVS
Trigger: TGATACCCCTCTTGGTGGGCAGCTGCTCTGGTGGAG...TCGACTATGCCTTAGACACATCCTCCTACCGTCCCCAATGCCCCCTGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CACCAAAGGATAGAACCCAGGCTGACACTCGACCCTAATCGGGAGGACCCCCTTGGCTGCCAACACCCATaGAGACACCAGATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: HQRIEPRLTLDPNREDPLGCQHP*RHQMAP
Trigger: AGGCGCCATCTGGTGTCTGCATGGGTGTTGGCAGCC...AAGGGGGTCCTCCCGATTAGGGTCGAGTGTCAGCCTGGGTTCTATCCTTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CACACAGTATGGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGGCAATGGCAGGGGCCCTaGCGTCAAGCTAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: HTVWLSSREGCAEAQQKGQWQGP*RQAKAK
Trigger: TTTGGCCTTAGCTTGACGGCAGGGCCCCTGCCATTG...CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CTCAGGACCAGGCCCACCCTGGGCAAGAGAGAACGTAAGCCCCAGGGCTTCAGGACATGTCCACTGAGTTaGTGTATGGCTTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: LRTRPTLGKRERKPQGFRTCPLS*CMACGP
Trigger: TGGTCCGCAAGCCATACACCAACTCAGTGGACATGT...CCTGAAGCCCTGGGGCTTACGTTCTCTCTTGCCCAGGGTGGGCCTGGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGAGCGGCTGGAACGCGTaGACTGGGCAGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQSGWNA*TGQIWC
Trigger: GCACCAAATCTGCCCAGTCCACGCGTTCCAGCCGCT...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp ACTCCACCCAGCACTGCAGTTCCCTTTGATTGGGGAAAAGTCAAAGGGCAAGGGAGCGTGTGGAGCGGCTaGAACGCGTGGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TPPSTAVPFDWGKVKGQGSVWSG*NAWTGQ
Trigger: CTGCCCAGTCCACGCGTTCCAGCCGCTCCACACGCT...CCCTTGCCCTTTGACTTTTCCCCAATCAAAGGGAACTGCAGTGCTGGGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp AAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCCAACCCGGCATCGGACCCAGATaGCACCACAGTGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KEMGMVLAQASGKAATQPGIGPR*HHSVWP
Trigger: TGGCCACACACTGTGGTGCCATCTGGGTCCGATGCC...GGGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGGTAGGATGTAGGCAATaGCGCCCAGCGCCCACATGT +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQVGCRQ*RPAPTC
Trigger: ACATGTGGGCGCTGGGCGTCATTGCCTACATCCTAC...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGTCAGCAGGCGGTCAATaGAGTCCTTGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQSAGGQ*SPWPGW
Trigger: CCAACCTGGCCAAGGACTTCATTGACCGCCTGCTGA...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp TGGCAGGGGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTGCAGTTCCCTTTGATTaGGGAAAAGTCAAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: WQGPCRQAKAKAGPWPHSAVPFD*GKVKGQ
Trigger: TTGCCCTTTGACTTTTCCCCAATCAAAGGGAACTGC...AGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp AAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCCAACCCAGAATCTGGAGAGGCTaGAGCCTGGGCAAGCCGATG +
Preference number: 4 (lower is better)
Translates to: KEMGMVLAQASGKAATQPRIWRG*SLGKPM
Trigger: CATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCT...GGGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGGTGTGCACGATGGCAGGTCACACAGTATaGCTAAGTTCCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PMSSWRTTGVHHGWVCTMAGHTV*LSSREG
Trigger: CCCCTCCCTGGAACTTAGCCATACTGTGTGACCTGC...CATCGTGCACACCCACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CACCAAAGGATAGAACCCAGGCTGACACTCGACCCTAATCGGGAGGACCCCCTTTCCATCCACAGGCCATaGCATGAAGGCCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: HQRIEPRLTLDPNREDPLSIHRP*HEGPSG
Trigger: CCCACTTGGGCCTTCATGCCATGGCCTGTGGATGGA...AAGGGGGTCCTCCCGATTAGGGTCGAGTGTCAGCCTGGGTTCTATCCTTTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGTGGTCTCAATCATCTTaGTGGCATACGGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQWSQSS*WHTAAG
Trigger: CCCGGCAGCCGTATGCCATCAAGATGATTGAGACCA...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp CCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGGTGTGCACGATGGGAAGGTTAATGCTGTaGAGGGAAGCAGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: PMSSWRTTGVHHGWVCTMGRLML*REAAQG
Trigger: ACCCTGTGCTGCTTCCCTTCACAGCATTAACCTTCC...CATCGTGCACACCCACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp ACTCCACCCAGCACTGCAGTTCCCTTTGATTGGGGAAAAGTCAAAGGGCAAGGGTTGATGGCATACGGCTaGCGGGTTGCCCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TPPSTAVPFDWGKVKGQGLMAYG*RVARCS
Trigger: AGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAA...CCCTTGCCCTTTGACTTTTCCCCAATCAAAGGGAACTGCAGTGCTGGGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACCAGGCTGGGTCGTGCTaGATGTGTGCACAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHQAGSC*MCAQPG
Trigger: GCCTGGCTGTGCACACATGCAGCACGACCCAGCCTG...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CACACAGTATGGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGGATACTGACTTGCTGCTaGGAACCCGGCTTTGACAGG +
Preference number: 4 (lower is better)
Translates to: HTVWLSSREGCAEAQQKGILTCC*EPGFDR
Trigger: CCTGTCAAAGCCGGGTTCCCAGCAGCAAGTCAGTAT...CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCTGCCTCAGAGGGAGGCTCCGTGTaGCCAGCAGTCGGGGGACCG +
Preference number: 4 (lower is better)
Translates to: QWQSISQYTLLTFSLPASEGGSV*PAVGGP
Trigger: CGGTCCCCCGACTGCTGGCCACACGGAGCCTCCCTC...TGAGGCAGGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp ACTCCACCCAGCACTGCAGTTCCCTTTGATTGGGGAAAAGTCAAAGGGCAAGGGCACGGCGTGACTTATTaGAGCGTGTGGAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPPSTAVPFDWGKVKGQGHGVTY*SVWSGW
Trigger: CCAGCCGCTCCACACGCTCCAATAAGTCACGCCGTG...CCCTTGCCCTTTGACTTTTCCCCAATCAAAGGGAACTGCAGTGCTGGGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp AAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCCAACCCAATGGCAGCCCTCCCTaGAGAGGCAGCCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: KEMGMVLAQASGKAATQPNGSPP*RGSLFT
Trigger: AGTAAACAGGCTGCCTCTCCAGGGAGGGCTGCCATT...GGGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp CGGTGGGCTGAGACCCCTCAGAATCTGGAGAGGCTGGAGCCTGGGCAAGCCGATAGGCAGCCTGTTTACTaGATACAGAGGATACGTTTA +
Preference number: 4 (lower is better)
Translates to: RWAETPQNLERLEPGQADRQPVY*IQRIRL
Trigger: TAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCT...ATCGGCTTGCCCAGGCTCCAGCCTCTCCAGATTCTGAGGGGTCTCAGCCCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTACCTCTGTGATGAAGTaGTTGTACACGTCACTCTTA +
Preference number: 4 (lower is better)
Translates to: GPAVKLRPKLGPGPILPTTSVMK*LYTSLL
Trigger: TAAGAGTGACGTGTACAAGCACTTCATCACAGAGGT...AGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGTGCATACTGACTTGCTaGTGGGAACCCGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQCILTC*WEPGFD
Trigger: GTCAAAGCCGGGTTCCCAGCAGCAAGTCAGTATGCA...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGGTGTGCATACTGACTTaGTGCTGGGAACCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQVCILT*CWEPGF
Trigger: AAAGCCGGGTTCCCAGCAGCAAGTCAGTATGCACAC...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGAAGGCACAAGCTTTGTaGCTACCAGGGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQKAQAL*LPGSPT
Trigger: AGTGGGAGACCCTGGTAGGCACAAAGCTTGTGCCTT...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACGCGCCTTCGTGCAGCTaGAGAGGAGGGAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHAPSCS*RGGSNR
Trigger: TCTGTTGCTCCCTCCTCTGCAGCTGCACGAAGGCGC...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTACCTGCCCCCGCAGGTaGCTCCCCAACATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLTLREPKLHSDSLTLSLTCPRR*LPNIQD
Trigger: GTCCTGGATGTTGGGGAGGCACCTGCGGGGGCAGGT...AAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp CACCAAAGGATAGAACCCAGGCTGACACTCGACCCTAATCGGGAGGACCCCCTTCGTTTAAGGAGGTTCTaGGATATGGAGCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HQRIEPRLTLDPNREDPLRLRRF*DMERCR
Trigger: CCTGCACCGCTCCATATCCCAGAACCTCCTTAAACG...AAGGGGGTCCTCCCGATTAGGGTCGAGTGTCAGCCTGGGTTCTATCCTTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGGCACAGAGAAAGGGCTaGAGCCAGACATTCTTCACC +
Preference number: 4 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQAQRKG*SQTFFT
Trigger: GGTGAAGAATGTCTGGCTCCAGCCCTTTCTCTGTGC...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CACCAAAGGATAGAACCCAGGCTGACACTCGACCCTAATCGGGAGGACCCCCTTAGACACTTGGGGAACTaGGGGGAAATTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HQRIEPRLTLDPNREDPLRHLGN*GEILRP
Trigger: TGGCCTCAGAATTTCCCCCCAGTTCCCCAAGTGTCT...AAGGGGGTCCTCCCGATTAGGGTCGAGTGTCAGCCTGGGTTCTATCCTTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp GGTGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGTGGCAGGACCTGCTCTaGAGGCAGTGCCCCGTCTAC +
Preference number: 4 (lower is better)
Translates to: GGTTMRHIPHGYYQGSQWWQDLL*RQCPVY
Trigger: GTAGACGGGGCACTGCCTTCAGAGCAGGTCCTGCCA...CCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACCACGTACCACTCGGCTaGAGCTGCCTCGGCCAATTA +
Preference number: 4 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHHVPLG*SCLGQL
Trigger: TAATTGGCCGAGGCAGCTTCAGCCGAGTGGTACGTG...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACTTCCCGCACACGGCGTaGCTTATTGGAGCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHFPHTA*LIGACG
Trigger: TCCACACGCTCCAATAAGTCACGCCGTGTGCGGGAA...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GGTGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGTGCCGGGTTGCCCGGTaGTCTACACGTACCACTCGG +
Preference number: 4 (lower is better)
Translates to: GGTTMRHIPHGYYQGSQWCRVAR*STRTTR
Trigger: CCGAGTGGTACGTGTAGAGCACCGGGCAACCCGGCA...CCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp TGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCCCATCCAGCACCATCTaGAGCACCCGCGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: WYNYEAHSTWLLPRFPVAPSSTI*STRVAS
Trigger: TGACGCCACGCGGGTGCTGCAGATGGTGCTGGATGG...GGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp TCCTGCCCAGGGGGCATTGGGGACGGTAGGAGGATGTGTCTAAGGCATAGTCGATGGGATATGGAGCGGTaGAGGTTCTTCATGGATGAA +
Preference number: 4 (lower is better)
Translates to: SCPGGIGDGRRMCLRHSRWDMER*RFFMDE
Trigger: TTCATCCATGAAGAACCTGCACCGCTCCATATCCCA...TCGACTATGCCTTAGACACATCCTCCTACCGTCCCCAATGCCCCCTGGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCTGCCTCAGCTGCAGGATATACCTaGCCCCGCAGGTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QWQSISQYTLLTFSLPASAAGYT*PRRCLP
Trigger: GGGGAGGCACCTGCGGGGGCAGGTATATCCTGCAGC...TGAGGCAGGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp CCAGGGCGGCAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACTTAGCTGTAACACGTaGGTCAAACTTGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: PGRQLLPSHVLMEDYRCALSCNT*VKLGPV
Trigger: TACAGGGCCAAGTTTGACCCACGTGTTACAGCTAAG...TGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTGCCGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACACTTATTGGAGCGTGTaGAGCGGCTGGAACGCGTGG +
Preference number: 4 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHTYWSV*SGWNAW
Trigger: CCACGCGTTCCAGCCGCTCCACACGCTCCAATAAGT...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CACACAGTATGGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGGAAGGATCAGGATGCATaGGAATGTGTGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: HTVWLSSREGCAEAQQKGKDQDA*ECVKPG
Trigger: CCCTGGTTTCACACATTCCCATGCATCCTGATCCTT...CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGGTGTGCACGATGAGTTTTGTTTCCCACTaGAGGTGGCACATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PMSSWRTTGVHHGWVCTMSFVSH*RWHMQE
Trigger: TTCCTGCATGTGCCACCTCCAGTGGGAAACAAAACT...CATCGTGCACACCCACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp ACCACAAAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCGAAATTCTGAGGCCATaGGGCTTGGTTCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TTKEMGMVLAQASGKAATEILRP*GLVLHC
Trigger: GCAGTGGAGAACCAAGCCCCATGGCCTCAGAATTTC...GGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTTTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAACAGGGGTGTGCATACTaGCTTGCTGCTGGGAACCCG +
Preference number: 4 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKQGCAY*LAAGNP
Trigger: CGGGTTCCCAGCAGCAAGTCAGTATGCACACCCCTG...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp ACCACAAAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCCAATGTACTCAGGCGTaGCACAGGTGGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TTKEMGMVLAQASGKAATQCTQA*HRWSSS
Trigger: TGATGAAGACCACCTGTGGCACGCCTGAGTACATTG...GGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTTTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp CAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCTGCCTCATTGCCCCTGAGGATCTaGCGGTACAGCCGGGTACGG +
Preference number: 4 (lower is better)
Translates to: QWQSISQYTLLTFSLPASLPLRI*RYSRVR
Trigger: CCGTACCCGGCTGTACCGGCAGATCCTCAGGGGCAA...TGAGGCAGGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAAAGAAGGCAGTGCCCCTaGCACCCTGGTTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKRRQCP*HPGFRG
Trigger: GCCTCTGAAACCAGGGTGCCAGGGGCACTGCCTTCT...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGCAGTGGGACCCAGACTaGAAGGTTAATGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QLLPSHVLMEDYRCAPWVQWDPD*KVNAVK
Trigger: CTTCACAGCATTAACCTTCCAGTCTGGGTCCCACTG...CACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CCA 90 bp CAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGCAAAAGAAATGGGGATaGTTCTGGCTCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QLLPSHVLMEDYRCAPWVQKKWG*FWLRPL
Trigger: CAGAGGCCTGAGCCAGAACCATCCCCATTTCTTTTG...CACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR TCA 90 bp ACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCCACACACGTACCACTCGGCTaGAGCTGCCTCGGCCAATTA +
Preference number: 4 (lower is better)
Translates to: TTMRHIPHGYYQGSQWPTHVPLG*SCLGQL
Trigger: TAATTGGCCGAGGCAGCTTCAGCCGAGTGGTACGTG...TGTGGGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp ACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCCACACGCCCACATGTCCACTaGGTTGGTGTATGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: TTMRHIPHGYYQGSQWPTRPHVH*VGVWLA
Trigger: CGCAAGCCATACACCAACTCAGTGGACATGTGGGCG...TGTGGGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp TGGCCCACAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCGTAGGATGTAGGCAATaGCGCCCAGCGCCCACATGT +
Preference number: 4 (lower is better)
Translates to: WPTVAVHFSIYSTDFLPSVGCRQ*RPAPTC
Trigger: ACATGTGGGCGCTGGGCGTCATTGCCTACATCCTAC...GGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTGTGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp TGGCCCACAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCAACTGTACTTGCCCCTaGGGATCTGCCGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: WPTVAVHFSIYSTDFLPSNCTCP*GSAGTA
Trigger: GGCTGTACCGGCAGATCCTCAGGGGCAAGTACAGTT...GGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTGTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACCAGGTTCTTCATGGATaGAGAGGCAGCCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHQVLHG*RGSHAH
Trigger: GTGAGCATGGCTGCCTCTTCATCCATGAAGAACCTG...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAAAGTCATCACCCTTCTTaGGAGCACTGGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKSHHPS*EHWPGR
Trigger: TCGGCCTGGCCAGTGCTCGCAAGAAGGGTGATGACT...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR GCA 90 bp GGTGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGAGTCATCACCCTTCTTaGGAGCACTGGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GGTTMRHIPHGYYQGSQWSHHPS*EHWPGR
Trigger: TCGGCCTGGCCAGTGCTCGCAAGAAGGGTGATGACT...CCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp TGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCCCTCTGACTGAGAGCTaGAGGATATACCTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: WYNYEAHSTWLLPRFPVAPLTES*RIYLPP
Trigger: CGGGGGCAGGTATATCCTGCAGCTCTCAGTCAGAGG...GGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp TGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCGCGGACCAGGACTTCTaGGGCAATGTACTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: WYNYEAHSTWLLPRFPVAADQDF*GNVLRR
Trigger: ACGCCTGAGTACATTGCCCCAGAAGTCCTGGTCCGC...GGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp TGGCCCACAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCTGGTCTCAATCATCTTaGTGGCATACGGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: WPTVAVHFSIYSTDFLPSWSQSS*WHTAAG
Trigger: CCCGGCAGCCGTATGCCATCAAGATGATTGAGACCA...GGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTGTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp ACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCCACAAGGAGCCCTTGGCAATaGTGCGGTCAAAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TTMRHIPHGYYQGSQWPTRSPWQ*CGQRAL
Trigger: GAGAGCTCTTTGACCGCATCATTGCCAAGGGCTCCT...TGTGGGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTAGTTGGTGTATGGCTTaGGGACCAGGACTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLTLREPKLHSDSLTLSLSWCMA*GPGLLG
Trigger: CCCCAGAAGTCCTGGTCCGCAAGCCATACACCAACT...AAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp ACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCACCTGCGTGGTGGTTCTaGGGGAGGCTCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TPSLLVTQITSQINYLLPPAWWF*GRLRVA
Trigger: GGCCACACGGAGCCTCCCTCAGAACCACCACGCAGG...TGGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp TCCCACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTGCGTCTCGGCGGCTCTaGCGGCCATCTCCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: SHSFTFSYSNHIPNKLSAASRRL*RPSPGN
Trigger: ATTGCCCGGAGATGGCCGGCAGAGCCGCCGAGACGC...AGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTGTGTGCATACTGACTTaGTGCTGGGAACCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: GLTLREPKLHSDSLTLSLVCILT*CWEPGF
Trigger: AAAGCCGGGTTCCCAGCAGCAAGTCAGTATGCACAC...AAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTCCCTTTTATATGACCTaGCTGGCCCTCACGAGCATG +
Preference number: 4 (lower is better)
Translates to: GLTLREPKLHSDSLTLSLPFYMT*LALTSM
Trigger: CATGCTCGTGAGGGCCAGGCAGGTCATATAAAAGGG...AAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTCAATGTACTCAGGCGTaGCACAGGTGGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: GLTLREPKLHSDSLTLSLQCTQA*HRWSSS
Trigger: TGATGAAGACCACCTGTGGCACGCCTGAGTACATTG...AAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp GGTGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCCAGTGGCCCACAGTaGCAGTCCATTTCTCAATAT +
Preference number: 4 (lower is better)
Translates to: GGTTMRHIPHGYYQGSQWPSGPQ*QSISQY
Trigger: ATATTGAGAAATGGACTGCCACTGTGGGCCACTGGG...CCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
3UTR CAA 72 bp ACTATCTGCTCCCAAGTCCTTGTCTCAGGGCTCACCTaGAGGGAACCCAAACTACATTCTGATAGTCTCACT +
Preference number: 4 (lower is better)
Translates to: TICSQVLVSGLT*REPKLHSDSLT
Trigger: AGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCCTGAGACAAGGACTTGGGAGCAGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp ACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCACTGGGAACCCGGCTTTaGCAGGGCCAACACTGTCCA +
Preference number: 4 (lower is better)
Translates to: TPSLLVTQITSQINYLLPLGTRL*QGQHCP
Trigger: TGGACAGTGTTGGCCCTGTCAAAGCCGGGTTCCCAG...TGGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp TCCCACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTATACGGCTGCCGGGTTaGCCGGTGCTCTACACGTAC +
Preference number: 4 (lower is better)
Translates to: SHSFTFSYSNHIPNKLSAIRLPG*PVLYTY
Trigger: GTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTAT...AGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp TCCCACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTTTGATGGCATACGGCTaGCGGGTTGCCCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SHSFTFSYSNHIPNKLSALMAYG*RVARCS
Trigger: AGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAA...AGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp ACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCATGGATGATGTTGGCATaGCGCACCCGACGCAGCACA +
Preference number: 4 (lower is better)
Translates to: TPSLLVTQITSQINYLLPWMMLA*RTRRST
Trigger: TGTGCTGCGTCGGGTGCGTCATGCCAACATCATCCA...TGGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp ACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTTTATATTACCAAGGTTCCCAGTaGCCCACAGTGGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: TLREPKLHSDSLTLSLLYYQGSQ*PTVAVH
Trigger: ATGGACTGCCACTGTGGGCCACTGGGAACCTTGGTA...ATATAAAAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp CACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCTCTCAGGGCTCACCTTaGGGGAACCCAAACTACATT +
Preference number: 4 (lower is better)
Translates to: HSFTFSYSNHIPNKLSAPSQGSP*GNPNYI
Trigger: AATGTAGTTTGGGTTCCCTCAAGGTGAGCCCTGAGA...GGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp TCCCACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTATACTGACTTGCTGCTaGGAACCCGGCTTTGACAGG +
Preference number: 4 (lower is better)
Translates to: SHSFTFSYSNHIPNKLSAILTCC*EPGFDR
Trigger: CCTGTCAAAGCCGGGTTCCCAGCAGCAAGTCAGTAT...AGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp ACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCACAGGCGTGCCACAGGTaGTCTTCATCAAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: TPSLLVTQITSQINYLLPQACHR*SSSSSH
Trigger: ATGACTGCTTGATGAAGACCACCTGTGGCACGCCTG...TGGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp ACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCACTGAGGACATACCTCTaGCTGAGAGCTGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: TPSLLVTQITSQINYLLPLRTYL*LRAAGY
Trigger: ATATCCTGCAGCTCTCAGTCAGAGGTATGTCCTCAG...TGGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR TCA 90 bp ACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCATTTGTCCCTTTTATATaGCCTGCCTGGCCCTCACGA +
Preference number: 4 (lower is better)
Translates to: TPSLLVTQITSQINYLLPFVPFI*PAWPSR
Trigger: TCGTGAGGGCCAGGCAGGTCATATAAAAGGGACAAA...TGGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp ACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCAACATGTCCACTGAGTTaGTGTATGGCTTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: TPSLLVTQITSQINYLLPTCPLS*CMACGP
Trigger: TGGTCCGCAAGCCATACACCAACTCAGTGGACATGT...TGGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CCA 90 bp CACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCCACGTTCCTGCTCTTTaGTGGTACAACTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: HSFTFSYSNHIPNKLSAPHVPAL*WYNYEA
Trigger: TGCCTCATAGTTGTACCACCAAAGAGCAGGAACGTG...GGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR GCA 90 bp CACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCACCTCTGTGATGAAGTaGTTGTACACGTCACTCTTA +
Preference number: 4 (lower is better)
Translates to: HSFTFSYSNHIPNKLSAPTSVMK*LYTSLL
Trigger: TAAGAGTGACGTGTACAAGCACTTCATCACAGAGGT...GGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS GCA 90 bp CTACACCTCGCGCGGGCGGCGGGCTCTTCGGCGTCTCGGCGGCTCTaGCGGCCATCTCCGGGCAATGGCAGCGGCCGCCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LHLARAAGSSASRRL*RPSPGNGSGRRRRR
Trigger: GCGGCGGCGGCGGCGGCCGCTGCCATTGCCCGGAGATGGCCGGCAGAGCCGCCGAGACGCCGAAGAGCCCGCCGCCCGCGCGAGGTGTAG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS CCA 90 bp GGGCTCTTCGGCGTCTCGGCGGCTCTGCCGGCCATCTCCGGGCAATaGCAGCGGCCGCCGCCGCCGCCGCCGCCGCCGCCATTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GLFGVSAALPAISGQ*QRPPPPPPPPPFSG
Trigger: GCCCGAGAATGGCGGCGGCGGCGGCGGCGGCGGCGGCCGCTGCCATTGCCCGGAGATGGCCGGCAGAGCCGCCGAGACGCCGAAGAGCCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS GCA 90 bp CATCACGGACACGAGGGCATCCTCTCCAGCGAGGCTGGCAGGACCTaGTCTGAAGGCAGTGCCCCGTCTACACCTCGCGCGGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: HHGHEGILSSEAGRT*SEGSAPSTPRAGGG
Trigger: CCCGCCGCCCGCGCGAGGTGTAGACGGGGCACTGCCTTCAGAGCAGGTCCTGCCAGCCTCGCTGGAGAGGATGCCCTCGTGTCCGTGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS-3UTR CAA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCTCCAGCTGGACATCCTaGGGTGGCTCGGGAAGGACC +
Preference number: 5 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCSSWTS*GGSGRT
Trigger: GGTCCTTCCCGAGCCACCCAAGGATGTCCAGCTGGA...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp GGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCACTGAGGCCATGGGGCTaGGTTCTCCACTGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GHRTQMAPQCVARLGRAALRPWG*VLHCLL
Trigger: CAGGAGGCAGTGGAGAACCAAGCCCCATGGCCTCAG...TGCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS TCA 90 bp ATGACCTGCCTGGCCCTCACGAGCATGGCCCTGAGGACATACCTCTaGCTGAGAGCTGCAGGATATACCTGCCCCCGCAGGTGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: MTCLALTSMALRTYL*LRAAGYTCPRRCLP
Trigger: GGGGAGGCACCTGCGGGGGCAGGTATATCCTGCAGCTCTCAGTCAGAGGTATGTCCTCAGGGCCATGCTCGTGAGGGCCAGGCAGGTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp AGGTCCACGCCATGGCCCTCCACCAGAGGTCCTGGGACCAGGAAGGCTCCCTGGCACATGTCCACTGAGTaGGTGTATGGCTTGCGGACC +
Preference number: 5 (lower is better)
Translates to: RSTPWPSTRGPGTRKAPWHMSTE*VYGLRT
Trigger: GGTCCGCAAGCCATACACCAACTCAGTGGACATGTG...CCAGGGAGCCTTCCTGGTCCCAGGACCTCTGGTGGAGGGCCATGGCGTGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS GCA 90 bp GGCCCTCACGAGCATGGCCCTGAGGACATACCTCTGACTGAGAGCTaGAGGATATACCTGCCCCCGCAGGTGCCTCCCCAACATCCAGGA +
Preference number: 5 (lower is better)
Translates to: GPHEHGPEDIPLTES*RIYLPPQVPPQHPG
Trigger: TCCTGGATGTTGGGGAGGCACCTGCGGGGGCAGGTATATCCTGCAGCTCTCAGTCAGAGGTATGTCCTCAGGGCCATGCTCGTGAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp CTCAGGACCAGGCCCACCCTGGGCAAGAGAGAACGTAAGCCCCAGGGCTTCAGGGGTGTGCATACTGACTaGCTGCTGGGAACCCGGCTT +
Preference number: 5 (lower is better)
Translates to: LRTRPTLGKRERKPQGFRGVHTD*LLGTRL
Trigger: AAGCCGGGTTCCCAGCAGCAAGTCAGTATGCACACC...CCTGAAGCCCTGGGGCTTACGTTCTCTCTTGCCCAGGGTGGGCCTGGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp GGCCCTGCCGTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTGAGTTGGTGTATGGCTaGCGGACCAGGACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: GPAVKLRPKLGPGPILPTELVYG*RTRTSG
Trigger: CCCAGAAGTCCTGGTCCGCAAGCCATACACCAACTC...AGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGACGGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp CTCAGGACCAGGCCCACCCTGGGCAAGAGAGAACGTAAGCCCCAGGGCTTCAGGGAAGGAAGACAGATCTaGGCTGGGAGGTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LRTRPTLGKRERKPQGFREGRQI*AGRWRA
Trigger: AGCCCTCCACCTCCCAGCCAAGATCTGTCTTCCTTC...CCTGAAGCCCTGGGGCTTACGTTCTCTCTTGCCCAGGGTGGGCCTGGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp TCCTGCCCAGGGGGCATTGGGGACGGTAGGAGGATGTGTCTAAGGCATAGTCGACCTGCCCAGGGGGCATaGGGGACGGTAGGAGGATGT +
Preference number: 5 (lower is better)
Translates to: SCPGGIGDGRRMCLRHSRPAQGA*GTVGGC
Trigger: ACATCCTCCTACCGTCCCCAATGCCCCCTGGGCAGG...TCGACTATGCCTTAGACACATCCTCCTACCGTCCCCAATGCCCCCTGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS GCA 90 bp CCGGTACTTGGTCTCAATCATCTTGATGGCATACGGCTGCCGGGTTaGCCGGTGCTCTACACGTACCACTCGGCTGAAGCTGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PVLGLNHLDGIRLPG*PVLYTYHSAEAASA
Trigger: GGCCGAGGCAGCTTCAGCCGAGTGGTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS GCA 90 bp CGCCCCTCCCGGTACTTGGTCTCAATCATCTTGATGGCATACGGCTaGCGGGTTGCCCGGTGCTCTACACGTACCACTCGGCTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RPSRYLVSIILMAYG*RVARCSTRTTRLKL
Trigger: CAGCTTCAGCCGAGTGGTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGGGAGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS-3UTR CAA 90 bp AGGGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCTTGGTCTCAATCATCTaGATGGCATACGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RASDPDGTTVCGQAGSCCLVSII*MAYGCR
Trigger: CCGGCAGCCGTATGCCATCAAGATGATTGAGACCAA...GCAGCACGACCCAGCCTGGCCACACACTGTGGTGCCATCTGGGTCCGATGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS TCA 90 bp ACTCACACACCTCCCGCCCCTCCCGGTACTTGGTCTCAATCATCTTaGTGGCATACGGCTGCCGGGTTGCCCGGTGCTCTACACGTACCA +
Preference number: 5 (lower is better)
Translates to: THTPPAPPGTWSQSS*WHTAAGLPGALHVP
Trigger: TGGTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGGGAGGGGCGGGAGGTGTGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS-3UTR CAA 90 bp TGCCCCTGGCACCCTGGTTTCAGAGGCAGGTCACACAGTATGGCTAAGTTCCAGGCTGGGAACCCGGCTTaGACAGGGCCAACACTGTCC +
Preference number: 5 (lower is better)
Translates to: CPWHPGFRGRSHSMAKFQAGNPA*TGPTLS
Trigger: GGACAGTGTTGGCCCTGTCAAAGCCGGGTTCCCAGC...CTGGAACTTAGCCATACTGTGTGACCTGCCTCTGAAACCAGGGTGCCAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp CACCAAAGGATAGAACCCAGGCTGACACTCGACCCTAATCGGGAGGACCCCCTTCAGTCATCACCCTTCTaGCGAGCACTGGCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: HQRIEPRLTLDPNREDPLQSSPF*RALARP
Trigger: CGGCCTGGCCAGTGCTCGCAAGAAGGGTGATGACTG...AAGGGGGTCCTCCCGATTAGGGTCGAGTGTCAGCCTGGGTTCTATCCTTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS GCA 90 bp TTGGTCTCAATCATCTTGATGGCATACGGCTGCCGGGTTGCCCGGTaGTCTACACGTACCACTCGGCTGAAGCTGCCTCGGCCAATTAGG +
Preference number: 5 (lower is better)
Translates to: LVSIILMAYGCRVAR*STRTTRLKLPRPIR
Trigger: CCTAATTGGCCGAGGCAGCTTCAGCCGAGTGGTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS GCA 90 bp TTCCTCCACAAGGCTCTTCAGGATTTGCAGCTGTTCTCACCCAAATaGACAGGAAGTTCCACATGGCAACTCGCGCGGGCGGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: FLHKALQDLQLFSPK*TGSSTWQLARAAGS
Trigger: AGAGCCCGCCGCCCGCGCGAGTTGCCATGTGGAACTTCCTGTGCATTTGGGTGAGAACAGCTGCAAATCCTGAAGAGCCTTGTGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575198.1
CDS CCA 90 bp TGCGGACCAGGACTTCTGGGGCAATGTACTCAGGCGTGCCACAGGTaGTCTTCATCAAGCAGTCATCACCCTTCTTGCGAGCACTGGCCA +
Preference number: 5 (lower is better)
Translates to: CGPGLLGQCTQACHR*SSSSSHHPSCEHWP
Trigger: TGGCCAGTGCTCGCAAGAAGGGTGATGACTGCTTGATGAAGACCACCTGTGGCACGCCTGAGTACATTGCCCCAGAAGTCCTGGTCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS-3UTR CAA 90 bp GTCAAGCTAAGGCCAAAGCTGGGCCCTGGCCCCATTCTACCCACTGAAGGCAGCACACGTGGGTCAAACTaGGCCCTGTACTTAGCTACC +
Preference number: 5 (lower is better)
Translates to: VKLRPKLGPGPILPTEGSTRGSN*ALYLAT
Trigger: GGTAGCTAAGTACAGGGCCAAGTTTGACCCACGTGT...GCTGCCTTCAGTGGGTAGAATGGGGCCAGGGCCCAGCTTTGGCCTTAGCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp CACACAGTATGGCTAAGTTCCAGGGAGGGGTGCGCAGAAGCTCAGCAGAAGGGGTACAGCCGGGTACGGTaGTCATCCTCAAACGGCATG +
Preference number: 5 (lower is better)
Translates to: HTVWLSSREGCAEAQQKGYSRVR*SSSNGM
Trigger: CATGCCGTTTGAGGATGACAACCGTACCCGGCTGTA...CCCCTTCTGCTGAGCTTCTGCGCACCCCTCCCTGGAACTTAGCCATACTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp AAAGAAATGGGGATGGTTCTGGCTCAGGCCTCTGGGAAAGCAGCCACCCAACCCGTCAAGGCACAAGCTTaGTGCCTACCAGGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: KEMGMVLAQASGKAATQPVKAQA*CLPGSP
Trigger: GGGAGACCCTGGTAGGCACAAAGCTTGTGCCTTGAC...GGGTTGGGTGGCTGCTTTCCCAGAGGCCTGAGCCAGAACCATCCCCATTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp CAACTCCTACCTTCCCATGTCCTCATGGAGGACTACAGGTGTGCACCATGGGTGGGCTCAGCCATTGTATaGCTGCTGGTAGCGCAGGTT +
Preference number: 5 (lower is better)
Translates to: QLLPSHVLMEDYRCAPWVGSAIV*LLVAQV
Trigger: AACCTGCGCTACCAGCAGCAATACAATGGCTGAGCC...CACCCATGGTGCACACCTGTAGTCCTCCATGAGGACATGGGAAGGTAGGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp TCCTGCCCAGGGGGCATTGGGGACGGTAGGAGGATGTGTCTAAGGCATAGTCGAGTGGTCTCTTTAGTTTaGTTTCCCACTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SCPGGIGDGRRMCLRHSRVVSLV*FPTGGG
Trigger: GCCACCTCCAGTGGGAAACAAAACTAAAGAGACCAC...TCGACTATGCCTTAGACACATCCTCCTACCGTCCCCAATGCCCCCTGGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAACATACGGCTGCCGGGTaGCCCGGTGCTCTACACGTA +
Preference number: 5 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKHTAAG*PGALHV
Trigger: TACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATG...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTCATACGGCTGCCGGGTaGCCCGGTGCTCTACACGTA +
Preference number: 5 (lower is better)
Translates to: GLTLREPKLHSDSLTLSLHTAAG*PGALHV
Trigger: TACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATG...AAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp ACTCCACCCAGCACTGCAGTTCCCTTTGATTGGGGAAAAGTCAAAGGGCAAGGGCGCCCCTCCCGGTACTaGGTCTCAATCATCTTGATG +
Preference number: 5 (lower is better)
Translates to: TPPSTAVPFDWGKVKGQGRPSRY*VSIILM
Trigger: CATCAAGATGATTGAGACCAAGTACCGGGAGGGGCG...CCCTTGCCCTTTGACTTTTCCCCAATCAAAGGGAACTGCAGTGCTGGGTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp GGTGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCAGTCATCACCCTTCTaGCGAGCACTGGCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: GGTTMRHIPHGYYQGSQWQSSPF*RALARP
Trigger: CGGCCTGGCCAGTGCTCGCAAGAAGGGTGATGACTG...CCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp GTCGACTTGGCACAGAGTGGTCTCTTTAGTTTTGTTTCCCACTGGAGGTGGCACTCGGTGAAGGAGCCCTaGGCAATGATGCGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: VDLAQSGLFSFVSHWRWHSVKEP*AMMRSK
Trigger: CTTTGACCGCATCATTGCCAAGGGCTCCTTCACCGA...GTGCCACCTCCAGTGGGAAACAAAACTAAAGAGACCACTCTGTGCCAAGTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAAACACGGCGTGACTTATaGGAGCGTGTGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKTRRDL*ERVERL
Trigger: CAGCCGCTCCACACGCTCCAATAAGTCACGCCGTGT...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp TGGCCCACAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCGAGTTGGTGTATGGCTaGCGGACCAGGACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: WPTVAVHFSIYSTDFLPSELVYG*RTRTSG
Trigger: CCCAGAAGTCCTGGTCCGCAAGCCATACACCAACTC...GGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTGTGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp TGGCCCACAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCTCGGTGAAGGAGCCCTaGGCAATGATGCGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: WPTVAVHFSIYSTDFLPSSVKEP*AMMRSK
Trigger: CTTTGACCGCATCATTGCCAAGGGCTCCTTCACCGA...GGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTGTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTCACATGTCCACTGAGTaGGTGTATGGCTTGCGGACC +
Preference number: 5 (lower is better)
Translates to: GLTLREPKLHSDSLTLSLHMSTE*VYGLRT
Trigger: GGTCCGCAAGCCATACACCAACTCAGTGGACATGTG...AAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp TGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCACACGTGGGTCAAACTaGGCCCTGTACTTAGCTACC +
Preference number: 5 (lower is better)
Translates to: WYNYEAHSTWLLPRFPVATRGSN*ALYLAT
Trigger: GGTAGCTAAGTACAGGGCCAAGTTTGACCCACGTGT...GGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp ACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGCCCACATTGGTCTCAATCATCTaGATGGCATACGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: TTMRHIPHGYYQGSQWPTLVSII*MAYGCR
Trigger: CCGGCAGCCGTATGCCATCAAGATGATTGAGACCAA...TGTGGGCCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp CAGTGGCAGTCCATTTCTCAATATACTCTACTGACTTTCTCCCTTCCTGCCTCAGTCTCAGGGCTCACCTaGAGGGAACCCAAACTACAT +
Preference number: 5 (lower is better)
Translates to: QWQSISQYTLLTFSLPASVSGLT*REPKLH
Trigger: ATGTAGTTTGGGTTCCCTCAAGGTGAGCCCTGAGAC...TGAGGCAGGAAGGGAGAAAGTCAGTAGAGTATATTGAGAAATGGACTGCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp TCCCACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTTCCAGCTGGACATCCTaGGGTGGCTCGGGAAGGACC +
Preference number: 5 (lower is better)
Translates to: SHSFTFSYSNHIPNKLSASSWTS*GGSGRT
Trigger: GGTCCTTCCCGAGCCACCCAAGGATGTCCAGCTGGA...AGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAAGCACTGCAGTTCCCTTaGATTGGGGAAAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKALQFP*IGEKSK
Trigger: CTTTGACTTTTCCCCAATCAAAGGGAACTGCAGTGC...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp AGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGTTTACAAATCTGTGATGAAGTGCTaGTACACGTCACTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: SPPWRGSLFTEYRGYVYKSVMKC*YTSLLV
Trigger: CACTAAGAGTGACGTGTACAAGCACTTCATCACAGA...TTTGTAAACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS-3UTR CAA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTTCTGTGATGAAGTGCTaGTACACGTCACTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: GLTLREPKLHSDSLTLSLSVMKC*YTSLLV
Trigger: CACTAAGAGTGACGTGTACAAGCACTTCATCACAGA...AAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp ACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCAGGTGTGCATACTGACTaGCTGCTGGGAACCCGGCTT +
Preference number: 5 (lower is better)
Translates to: TPSLLVTQITSQINYLLPGVHTD*LLGTRL
Trigger: AAGCCGGGTTCCCAGCAGCAAGTCAGTATGCACACC...TGGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp CACTCCTTCACTTTTAGTTACTCAAATCACATCCCAAATAAACTATCTGCTCCCCGCCCCTCCCGGTACTaGGTCTCAATCATCTTGATG +
Preference number: 5 (lower is better)
Translates to: HSFTFSYSNHIPNKLSAPRPSRY*VSIILM
Trigger: CATCAAGATGATTGAGACCAAGTACCGGGAGGGGCG...GGGAGCAGATAGTTTATTTGGGATGTGATTTGAGTAACTAAAAGTGAAGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp ACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTTGTCCCTTTTATATTACAGCCGGGTACGGTaGTCATCCTCAAACGGCATG +
Preference number: 5 (lower is better)
Translates to: TLREPKLHSDSLTLSLLYYSRVR*SSSNGM
Trigger: CATGCCGTTTGAGGATGACAACCGTACCCGGCTGTA...ATATAAAAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS-3UTR CAA 90 bp GGTGGTACAACTATGAGGCACATTCCACATGGTTATTACCAAGGTTCCCAGTGGTCTGATAGTCTCACTTaGTCCCTTTTATATGACCTG +
Preference number: 5 (lower is better)
Translates to: GGTTMRHIPHGYYQGSQWSDSLT*SLLYDL
Trigger: CAGGTCATATAAAAGGGACAAAGTGAGACTATCAGA...CCACTGGGAACCTTGGTAATAACCATGTGGAATGTGCCTCATAGTTGTACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS TCA 72 bp GGGCATCCTCTCCAGCGAGGCTGGCAGGACCTGCTCTaGAGGCAGTGCCCCGTCTACACCTCGCGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: GHPLQRGWQDLL*RQCPVYTSRGR
Trigger: CCGCCCGCGCGAGGTGTAGACGGGGCACTGCCTTCAGAGCAGGTCCTGCCAGCCTCGCTGGAGAGGATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS CCA 72 bp CCCGCAGCTCCCGTTCCCGCACACGGCGTGACTTATTaGAGCGTGTGGAGCGGCTGGAACGCGTGGACTGGG +
Preference number: 6 (lower is better)
Translates to: PAAPVPAHGVTY*SVWSGWNAWTG
Trigger: CCCAGTCCACGCGTTCCAGCCGCTCCACACGCTCCAATAAGTCACGCCGTGTGCGGGAACGGGAGCTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS TCA 72 bp CCTGTACTTAGCTACCCTGGCCCTGCGTGGTGGTTCTaGGGGAGGCTCCGTGTGGCCAGCAGTCGGGGGACC +
Preference number: 6 (lower is better)
Translates to: PVLSYPGPAWWF*GRLRVASSRGT
Trigger: GGTCCCCCGACTGCTGGCCACACGGAGCCTCCCTCAGAACCACCACGCAGGGCCAGGGTAGCTAAGTACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS CAA 72 bp TCCCGCAGCTCCCGTTCCCGCACACGGCGTGACTTATaGGAGCGTGTGGAGCGGCTGGAACGCGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: SRSSRSRTRRDL*ERVERLERVDW
Trigger: CCAGTCCACGCGTTCCAGCCGCTCCACACGCTCCAATAAGTCACGCCGTGTGCGGGAACGGGAGCTGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS TCA 72 bp GTTGAGCTCCCGCAGCTCCCGTTCCCGCACACGGCGTaGCTTATTGGAGCGTGTGGAGCGGCTGGAACGCGT +
Preference number: 6 (lower is better)
Translates to: VELPQLPFPHTA*LIGACGAAGTR
Trigger: ACGCGTTCCAGCCGCTCCACACGCTCCAATAAGTCACGCCGTGTGCGGGAACGGGAGCTGCGGGAGCTCAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS TCA 72 bp CGGCTCAGCCATTGTATTGCTGCTGGTAGCGCAGGTTaGGCTCCCGCAGCTCCCGTTCCCGCACACGGCGTG +
Preference number: 6 (lower is better)
Translates to: RLSHCIAAGSAG*APAAPVPAHGV
Trigger: CACGCCGTGTGCGGGAACGGGAGCTGCGGGAGCTCAACCTGCGCTACCAGCAGCAATACAATGGCTGAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS CAA 90 bp AGCACACGCAGCTCCGACTCACACACCTCCCGCCCCTCCCGGTACTaGGTCTCAATCATCTTGATGGCATACGGCTGCCGGGTTGCCCGG +
Preference number: 6 (lower is better)
Translates to: STRSSDSHTSRPSRY*VSIILMAYGCRVAR
Trigger: CCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGGGAGGGGCGGGAGGTGTGTGAGTCGGAGCTGCGTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS TCA 72 bp CCTCCCGCCCCTCCCGGTACTTGGTCTCAATCATCTTaGTGGCATACGGCTGCCGGGTTGCCCGGTGCTCTA +
Preference number: 6 (lower is better)
Translates to: PPAPPGTWSQSS*WHTAAGLPGAL
Trigger: TAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGGGAGGGGCGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS TCA 72 bp CTGGCCCTCACGAGCATGGCCCTGAGGACATACCTCTaGCTGAGAGCTGCAGGATATACCTGCCCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: LALTSMALRTYL*LRAAGYTCPRR
Trigger: CCTGCGGGGGCAGGTATATCCTGCAGCTCTCAGTCAGAGGTATGTCCTCAGGGCCATGCTCGTGAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS CAA 72 bp ACCTCCCGCCCCTCCCGGTACTTGGTCTCAATCATCTaGATGGCATACGGCTGCCGGGTTGCCCGGTGCTCT +
Preference number: 6 (lower is better)
Translates to: TSRPSRYLVSII*MAYGCRVARCS
Trigger: AGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGGGAGGGGCGGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS CAA 90 bp GACTCACACACCTCCCGCCCCTCCCGGTACTTGGTCTCAATCATCTaGATGGCATACGGCTGCCGGGTTGCCCGGTGCTCTACACGTACC +
Preference number: 6 (lower is better)
Translates to: DSHTSRPSRYLVSII*MAYGCRVARCSTRT
Trigger: GGTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGGGAGGGGCGGGAGGTGTGTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS GCA 72 bp ATCATCTTGATGGCATACGGCTGCCGGGTTGCCCGGTaGTCTACACGTACCACTCGGCTGAAGCTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: IILMAYGCRVAR*STRTTRLKLPR
Trigger: CCGAGGCAGCTTCAGCCGAGTGGTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS GCA 72 bp GAGCATGGCCCTGAGGACATACCTCTGACTGAGAGCTaGAGGATATACCTGCCCCCGCAGGTGCCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: EHGPEDIPLTES*RIYLPPQVPPQ
Trigger: TTGGGGAGGCACCTGCGGGGGCAGGTATATCCTGCAGCTCTCAGTCAGAGGTATGTCCTCAGGGCCATGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS CAA 72 bp AGCTCCGACTCACACACCTCCCGCCCCTCCCGGTACTaGGTCTCAATCATCTTGATGGCATACGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: SSDSHTSRPSRY*VSIILMAYGCR
Trigger: CCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGGGAGGGGCGGGAGGTGTGTGAGTCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS CAA 72 bp TTGCCCCTGAGGATCTGCCGGTACAGCCGGGTACGGTaGTCATCCTCAAACGGCATGGTGCCACTGAGTAGG +
Preference number: 6 (lower is better)
Translates to: LPLRICRYSRVR*SSSNGMVPLSR
Trigger: CCTACTCAGTGGCACCATGCCGTTTGAGGATGACAACCGTACCCGGCTGTACCGGCAGATCCTCAGGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS GCA 72 bp GGTCTCAATCATCTTGATGGCATACGGCTGCCGGGTTaGCCGGTGCTCTACACGTACCACTCGGCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: GLNHLDGIRLPG*PVLYTYHSAEA
Trigger: AGCTTCAGCCGAGTGGTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS GCA 72 bp CGGTACTTGGTCTCAATCATCTTGATGGCATACGGCTaGCGGGTTGCCCGGTGCTCTACACGTACCACTCGG +
Preference number: 6 (lower is better)
Translates to: RYLVSIILMAYG*RVARCSTRTTR
Trigger: CCGAGTGGTACGTGTAGAGCACCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291041.6
ENST00000570631.5
CDS TCA 72 bp ACAGACTCACCTCCCCAGAGTAACTGTACTTGCCCCTaGGGATCTGCCGGTACAGCCGGGTACGGTTGTCAT +
Preference number: 6 (lower is better)
Translates to: TDSPPQSNCTCP*GSAGTAGYGCH
Trigger: ATGACAACCGTACCCGGCTGTACCGGCAGATCCTCAGGGGCAAGTACAGTTACTCTGGGGAGGTGAGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS CCA 72 bp CTCTGGCAGCGCGAGGAGGCACGTTTAAGGAGGTTCTaGGATATGGAGCGGTGCAGGTTCTTCATGGATGAA +
Preference number: 6 (lower is better)
Translates to: LWQREEARLRRF*DMERCRFFMDE
Trigger: TTCATCCATGAAGAACCTGCACCGCTCCATATCCCAGAACCTCCTTAAACGTGCCTCCTCGCGCTGCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291041.6
CDS CAA 90 bp GGGCTCACCTTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTaGTCCCTTTTATATGACCTGCCTGGCCCTCACGAGCATGGCCCT +
Preference number: 6 (lower is better)
Translates to: GLTLREPKLHSDSLT*SLLYDLPGPHEHGP
Trigger: AGGGCCATGCTCGTGAGGGCCAGGCAGGTCATATAAAAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAAGGTGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5
CDS CAA 72 bp TTGAGGGAACCCAAACTACATTCTGATAGTCTCACTTaGTCCCTTTTATATGACCTGCCTGGCCCTCACGAG +
Preference number: 6 (lower is better)
Translates to: LREPKLHSDSLT*SLLYDLPGPHE
Trigger: CTCGTGAGGGCCAGGCAGGTCATATAAAAGGGACAAAGTGAGACTATCAGAATGTAGTTTGGGTTCCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570631.5