Pregenerated sensors for PSG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000242221

Ensembl transcript IDs: ENST00000406487.6, ENST00000491995.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	CTCATGAATAGATTCCCAATTCTGGGGCACTCAGATAGAGAGCAAAAGGAAATGCATAAATCTGGAGAATaGAACATTCCAAGAATCAGC	+
Preference number: 2 (lower is better) Translates to: LMNRFPILGHSDREQKEMHKSGE*NIPRIS Trigger: GCTGATTCTTGGAATGTTTCATTCTCCAGATTTATG...CATTTCCTTTTGCTCTCTATCTGAGTGCCCCAGAATTGGGAATCTATTCATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406487.6
3UTR-3UTR CAA 90 bp	AGATTCCCAATTCTGGGGCACTCAGATAGAGAGCAAAAGGAAATGTTTCAATTTGAAGTTATCAGGAGCTaGTATTCAAGAGTCCTTGTA	+
Preference number: 3 (lower is better) Translates to: RFPILGHSDREQKEMFQFEVIRS*YSRVLV Trigger: TACAAGGACTCTTGAATACAAGCTCCTGATAACTTC...AAATTGAAACATTTCCTTTTGCTCTCTATCTGAGTGCCCCAGAATTGGGAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406487.6
CDS-3UTR TCA 90 bp	ATAGATTCCCAATTCTGGGGCACTCAGATAGAGAGCAAAAGGAAATGTTTCAATTTAAAAGTGATGCTGTaGCCAGGAGCCCCTTCCATT	+
Preference number: 4 (lower is better) Translates to: IDSQFWGTQIESKRKCFNLKVML*PGAPSI Trigger: AATGGAAGGGGCTCCTGGTCACAGCATCACTTTTAA...ATTGAAACATTTCCTTTTGCTCTCTATCTGAGTGCCCCAGAATTGGGAATCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000406487.6
CDS-3UTR TCA 90 bp	AGATTCCCAATTCTGGGGCACTCAGATAGAGAGCAAAAGGAAATGTTTCAATTTCATAAATCTGGAGAATaGAACATTCCAAGAATCAGC	+
Preference number: 4 (lower is better) Translates to: RFPILGHSDREQKEMFQFHKSGE*NIPRIS Trigger: GCTGATTCTTGGAATGTTTCATTCTCCAGATTTATG...AAATTGAAACATTTCCTTTTGCTCTCTATCTGAGTGCCCCAGAATTGGGAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406487.6
CDS-3UTR CAA 90 bp	CTCATGAATAGATTCCCAATTCTGGGGCACTCAGATAGAGAGCAAAAGGAAATGGTAGAAGCAGAGACTTaGACTGTCAACGATGTGGAG	+
Preference number: 5 (lower is better) Translates to: LMNRFPILGHSDREQKEMVEAET*TVNDVE Trigger: CTCCACATCGTTGACAGTCAAAGTCTCTGCTTCTAC...CATTTCCTTTTGCTCTCTATCTGAGTGCCCCAGAATTGGGAATCTATTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406487.6
CDS-3UTR CAA 90 bp	CTCATGAATAGATTCCCAATTCTGGGGCACTCAGATAGAGAGCAAAAGGAAATGGAAGTTATCAGGAGCTaGTATTCAAGAGTCCTTGTA	+
Preference number: 5 (lower is better) Translates to: LMNRFPILGHSDREQKEMEVIRS*YSRVLV Trigger: TACAAGGACTCTTGAATACAAGCTCCTGATAACTTC...CATTTCCTTTTGCTCTCTATCTGAGTGCCCCAGAATTGGGAATCTATTCATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406487.6
CDS GCA 72 bp	GTATGCAGTGGCGCTATCTCGGCACGCTGCAACTTCTaGCTCCTGGGTTCACGTGATTCTCCTGCCACAGCC	+
Preference number: 6 (lower is better) Translates to: VCSGAISARCNF*LLGSRDSPATA Trigger: GGCTGTGGCAGGAGAATCACGTGAACCCAGGAGGCAGAAGTTGCAGCGTGCCGAGATAGCGCCACTGCATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491995.1

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