Pregenerated sensors for PSG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000231924Ensembl transcript IDs: ENST00000244296.6, ENST00000312439.10, ENST00000403380.7, ENST00000436291.7, ENST00000595124.5, ENST00000595356.5, ENST00000602039.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTTACAGTTTGAGCATCTGTTGTTATGGTGTCGAATATTTTGGTaGGTTCTGAGTGGCTCATGCTTCACGTACAAGGGTTTTCCCATG | + |
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Preference number: 1 (lower is better) Translates to: GLQFEHLLLWCRIFW*VLSGSCFTYKGFPM Trigger: CATGGGAAAACCCTTGTACGTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGATGCTCAAACTGTAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| 3UTR GCA 90 bp | AACCTCTTGAGAATAGGAAGCCAAACCAAGGCTGACTTCAGACTTTaGCTGCAGTTCATATTGGTTCATTCTATCTATGTTTTTAATATA | + |
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Preference number: 1 (lower is better) Translates to: NLLRIGSQTKADFRL*LQFILVHSIYVFNI Trigger: TATATTAAAAACATAGATAGAATGAACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGCCTTGGTTTGGCTTCCTATTCTCAAGAGGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| 3UTR CAA 90 bp | AGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCTaGCTCTTAGTGATTCCATGGGAGAAAATGGAATTGGAGGTACTA | + |
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Preference number: 2 (lower is better) Translates to: SCPPPAYRASGTEWV*LLVIPWEKMELEVL Trigger: TAGTACCTCCAATTCCATTTTCTCCCATGGAATCACTAAGAGCAAGACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGTTTCTTCAAATGTGGTCTGATTGTTTACATAAGTGCAGCAAGAGTAGCATTCTCATGAATAGTTaGCCAATTCTGGGGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VEFLQMWSDCLHKCSKSSILMNS*PILGQS Trigger: TGACTGCCCCAGAATTGGGCAACTATTCATGAGAAT...GCTACTCTTGCTGCACTTATGTAAACAATCAGACCACATTTGAAGAAACTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| 3UTR CCA 72 bp | TGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTaGGTCTTGCTCTTAGTGATTCCATGGGAGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: CPPPAYRASGTE*VLLLVIPWEKM Trigger: CATTTTCTCCCATGGAATCACTAAGAGCAAGACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| 3UTR TCA 72 bp | CACAAACCTCTTGAGAATAGGAAGCCAAACCAAGGCTaGCTTCAGACTTTGCCTGCAGTTCATATTGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: HKPLENRKPNQG*LQTLPAVHIGS Trigger: TGAACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGCCTTGGTTTGGCTTCCTATTCTCAAGAGGTTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| 3UTR-3UTR CAA 90 bp | AATTCTAATGACTGCATTATCCTGCCAAGTGAAAGAGGCAGGCATGAGCAAGGAGTCCTGGTTTACAGTTaGAGCATCTGTTGTTATGGT | + |
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Preference number: 3 (lower is better) Translates to: NSNDCIILPSERGRHEQGVLVYS*SICCYG Trigger: ACCATAACAACAGATGCTCAAACTGTAAACCAGGAC...TCCTTGCTCATGCCTGCCTCTTTCACTTGGCAGGATAATGCAGTCATTAGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| 3UTR TCA 72 bp | TTTGAGCATCTGTTGTTATGGTGTCGAATATTTTGGTaGGTTCTGAGTGGCTCATGCTTCACGTACAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: FEHLLLWCRIFW*VLSGSCFTYKG Trigger: ACCCTTGTACGTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGATGCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| 3UTR CCA 72 bp | GTTGTTATGGTGTCGAATATTTTGGTGAGTTCTGAGTaGCTCATGCTTCACGTACAAGGGTTTTCCCATGAA | + |
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Preference number: 3 (lower is better) Translates to: VVMVSNILVSSE*LMLHVQGFSHE Trigger: TTCATGGGAAAACCCTTGTACGTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| 3UTR GCA 72 bp | GAGTTTCTTCAAATGTGGTCTGATTGTTTACATAAGTaGAGCAAGAGTAGCAATGGACCATGTAGGCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: EFLQMWSDCLHK*SKSSNGPCRLS Trigger: AGACAGCCTACATGGTCCATTGCTACTCTTGCTGCACTTATGTAAACAATCAGACCACATTTGAAGAAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| 3UTR GCA 72 bp | AGAATAGGAAGCCAAACCAAGGCTGACTTCAGACTTTaGCTGCAGTTCATATTGGTTCATTCTATCTATGTT | + |
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Preference number: 3 (lower is better) Translates to: RIGSQTKADFRL*LQFILVHSIYV Trigger: AACATAGATAGAATGAACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGCCTTGGTTTGGCTTCCTATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR CCA 90 bp | GGCTTCTGGAACAGAGTGGGTCTTGCTCTTAGTGATTCCATGGGAGAAAATGGAAATTCTGGGGAGGTCTaGACCATAGAGGACATTCAG | + |
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Preference number: 4 (lower is better) Translates to: GFWNRVGLALSDSMGENGNSGEV*TIEDIQ Trigger: CTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATT...TCCATTTTCTCCCATGGAATCACTAAGAGCAAGACCCACTCTGTTCCAGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR TCA 90 bp | TTTACATTGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCTGTCGAATATTTTGGTaGGTTCTGAGTGGCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: FTLSCPPPAYRASGTEWVCRIFW*VLSGSC Trigger: GCATGAGCCACTCAGAACTCACCAAAATATTCGACA...GACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCAATGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| 3UTR CAA 72 bp | CCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCTaGCTCTTAGTGATTCCATGGGAGAAAATGGAATTG | + |
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Preference number: 4 (lower is better) Translates to: PPAYRASGTEWV*LLVIPWEKMEL Trigger: CAATTCCATTTTCTCCCATGGAATCACTAAGAGCAAGACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR TCA 90 bp | GCCAAACCAAGGCTGACTTCAGACTTTGCCTGCAGTTCATATTGGTTCATTCTATTAAAAGTGATGCTGTaGGCAGGAGCCCCTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: AKPRLTSDFACSSYWFILLKVML*AGAPSI Trigger: AATGGAAGGGGCTCCTGCTCACAGCATCACTTTTAA...TAGAATGAACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGCCTTGGTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR TCA 90 bp | CTTCACGTACAAGGGTTTTCCCATGAAATTTACATTGAGTTGTCCACCTCCAGCTTAAAAGTGATGCTGTaGGCAGGAGCCCCTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: LHVQGFSHEIYIELSTSSLKVML*AGAPSI Trigger: AATGGAAGGGGCTCCTGCTCACAGCATCACTTTTAA...GCTGGAGGTGGACAACTCAATGTAAATTTCATGGGAAAACCCTTGTACGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR TCA 90 bp | GAGTCTTGTTCTGACATCTTGGGAAAAACTGTCCACAGTGTGAAGTCATCCACTTTAAAAGTGATGCTGTaGGCAGGAGCCCCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ESCSDILGKTVHSVKSSTLKVML*AGAPSI Trigger: AATGGAAGGGGCTCCTGCTCACAGCATCACTTTTAA...AGTGGATGACTTCACACTGTGGACAGTTTTTCCCAAGATGTCAGAACAAGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CCA 90 bp | GAGTCTTGTTCTGACATCTTGGGAAAAACTGTCCACAGTGTGAAGTCATCCACTAATTCTGGGGAGGTCTaGACCATAGAGGACATTCAG | + |
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Preference number: 4 (lower is better) Translates to: ESCSDILGKTVHSVKSSTNSGEV*TIEDIQ Trigger: CTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATT...AGTGGATGACTTCACACTGTGGACAGTTTTTCCCAAGATGTCAGAACAAGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR TCA 90 bp | TCTGATTGTTTACATAAGTGCAGCAAGAGTAGCAATGGACCATGTAGGCTGTCTTTAAAAGTGATGCTGTaGGCAGGAGCCCCTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SDCLHKCSKSSNGPCRLSLKVML*AGAPSI Trigger: AATGGAAGGGGCTCCTGCTCACAGCATCACTTTTAA...AGACAGCCTACATGGTCCATTGCTACTCTTGCTGCACTTATGTAAACAATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR TCA 90 bp | TCTGTTGTTATGGTGTCGAATATTTTGGTGAGTTCTGAGTGGCTCATGCTTCACTTAAAAGTGATGCTGTaGGCAGGAGCCCCTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SVVMVSNILVSSEWLMLHLKVML*AGAPSI Trigger: AATGGAAGGGGCTCCTGCTCACAGCATCACTTTTAA...GTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR TCA 90 bp | CTTCACGTACAAGGGTTTTCCCATGAAATTTACATTGAGTTGTCCACCTCCAGCTGTCGAATATTTTGGTaGGTTCTGAGTGGCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: LHVQGFSHEIYIELSTSSCRIFW*VLSGSC Trigger: GCATGAGCCACTCAGAACTCACCAAAATATTCGACA...GCTGGAGGTGGACAACTCAATGTAAATTTCATGGGAAAACCCTTGTACGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR TCA 90 bp | AATTCTAATGACTGCATTATCCTGCCAAGTGAAAGAGGCAGGCATGAGCAAGGATGTCGAATATTTTGGTaGGTTCTGAGTGGCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: NSNDCIILPSERGRHEQGCRIFW*VLSGSC Trigger: GCATGAGCCACTCAGAACTCACCAAAATATTCGACA...TCCTTGCTCATGCCTGCCTCTTTCACTTGGCAGGATAATGCAGTCATTAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CCA 90 bp | TCTGTTGTTATGGTGTCGAATATTTTGGTGAGTTCTGAGTGGCTCATGCTTCACAATTCTGGGGAGGTCTaGACCATAGAGGACATTCAG | + |
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Preference number: 4 (lower is better) Translates to: SVVMVSNILVSSEWLMLHNSGEV*TIEDIQ Trigger: CTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATT...GTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CCA 90 bp | AATTCTAATGACTGCATTATCCTGCCAAGTGAAAGAGGCAGGCATGAGCAAGGATTGGTGAGTTCTGAGTaGCTCATGCTTCACGTACAA | + |
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Preference number: 4 (lower is better) Translates to: NSNDCIILPSERGRHEQGLVSSE*LMLHVQ Trigger: TTGTACGTGAAGCATGAGCCACTCAGAACTCACCAA...TCCTTGCTCATGCCTGCCTCTTTCACTTGGCAGGATAATGCAGTCATTAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| 3UTR CAA 72 bp | TGCTTCACGTACAAGGGTTTTCCCATGAAATTTACATaGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CFTYKGFPMKFT*SCPPPAYRASG Trigger: TCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCAATGTAAATTTCATGGGAAAACCCTTGTACGTGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CCA 90 bp | CAAATGTGGTCTGATTGTTTACATAAGTGCAGCAAGAGTAGCAATGGACCATGTAATTCTGGGGAGGTCTaGACCATAGAGGACATTCAG | + |
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Preference number: 4 (lower is better) Translates to: QMWSDCLHKCSKSSNGPCNSGEV*TIEDIQ Trigger: CTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATT...ACATGGTCCATTGCTACTCTTGCTGCACTTATGTAAACAATCAGACCACATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR CCA 90 bp | TTTCCCATGAAATTTACATTGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAGCTTCTGGAACAGAGTaGGTCTTGCTCTTAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: FPMKFTLSCPPPAYRASGASGTE*VLLLVI Trigger: AATCACTAAGAGCAAGACCCACTCTGTTCCAGAAGC...TCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCAATGTAAATTTCATGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CCA 90 bp | ATGAAATTTACATTGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTTGGTGAGTTCTGAGTaGCTCATGCTTCACGTACAA | + |
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Preference number: 4 (lower is better) Translates to: MKFTLSCPPPAYRASGTELVSSE*LMLHVQ Trigger: TTGTACGTGAAGCATGAGCCACTCAGAACTCACCAA...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCAATGTAAATTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CCA 90 bp | TCTGTTGTTATGGTGTCGAATATTTTGGTGAGTTCTGAGTGGCTCATGCTTCACTTGGTGAGTTCTGAGTaGCTCATGCTTCACGTACAA | + |
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Preference number: 4 (lower is better) Translates to: SVVMVSNILVSSEWLMLHLVSSE*LMLHVQ Trigger: TTGTACGTGAAGCATGAGCCACTCAGAACTCACCAA...GTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CCA 90 bp | AATTCTAATGACTGCATTATCCTGCCAAGTGAAAGAGGCAGGCATGAGCAAGGACTTGTTCTGACATCTTaGGAAAAACTGTCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: NSNDCIILPSERGRHEQGLVLTS*EKLSTV Trigger: CACTGTGGACAGTTTTTCCCAAGATGTCAGAACAAG...TCCTTGCTCATGCCTGCCTCTTTCACTTGGCAGGATAATGCAGTCATTAGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CCA 90 bp | ATAAGTGCAGCAAGAGTAGCAATGGACCATGTAGGCTGTCTTCTAAAATTTTCTAATTCTGGGGAGGTCTaGACCATAGAGGACATTCAG | + |
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Preference number: 4 (lower is better) Translates to: ISAARVAMDHVGCLLKFSNSGEV*TIEDIQ Trigger: CTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATT...AGAAAATTTTAGAAGACAGCCTACATGGTCCATTGCTACTCTTGCTGCACTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR CCA 90 bp | AATTCTAATGACTGCATTATCCTGCCAAGTGAAAGAGGCAGGCATGAGCAAGGACTCTTAGTGATTCCATaGGAGAAAATGGAATTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NSNDCIILPSERGRHEQGLLVIP*EKMELE Trigger: CTCCAATTCCATTTTCTCCCATGGAATCACTAAGAG...TCCTTGCTCATGCCTGCCTCTTTCACTTGGCAGGATAATGCAGTCATTAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CCA 90 bp | GTCTTGCTCTTAGTGATTCCATGGGAGAAAATGGAATTGGAGGTACTAGTAGAAGCTTCTGGAACAGAGTaGGTCTTGCTCTTAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: VLLLVIPWEKMELEVLVEASGTE*VLLLVI Trigger: AATCACTAAGAGCAAGACCCACTCTGTTCCAGAAGC...TTCTACTAGTACCTCCAATTCCATTTTCTCCCATGGAATCACTAAGAGCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CCA 90 bp | TTTCCCATGAAATTTACATTGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGACTTGTTCTGACATCTTaGGAAAAACTGTCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: FPMKFTLSCPPPAYRASGLVLTS*EKLSTV Trigger: CACTGTGGACAGTTTTTCCCAAGATGTCAGAACAAG...TCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCAATGTAAATTTCATGGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR GCA 90 bp | ACCATAAACATATCAATTCTCATGAATAGTTGCCCAATTCTGGGGCAGTCAGGTATTCTCATGAATAGTTaGCCAATTCTGGGGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TINISILMNSCPILGQSGILMNS*PILGQS Trigger: TGACTGCCCCAGAATTGGGCAACTATTCATGAGAAT...ACCTGACTGCCCCAGAATTGGGCAACTATTCATGAGAATTGATATGTTTATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR GCA 90 bp | GTGGAGTTTCTTCAAATGTGGTCTGATTGTTTACATAAGTGCAGCAAGAGTAGCGCTGACTTCAGACTTTaGCTGCAGTTCATATTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VEFLQMWSDCLHKCSKSSADFRL*LQFILV Trigger: AACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGC...GCTACTCTTGCTGCACTTATGTAAACAATCAGACCACATTTGAAGAAACTCCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR CCA 90 bp | TCTGTTGTTATGGTGTCGAATATTTTGGTGAGTTCTGAGTGGCTCATGCTTCACCTCTTAGTGATTCCATaGGAGAAAATGGAATTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SVVMVSNILVSSEWLMLHLLVIP*EKMELE Trigger: CTCCAATTCCATTTTCTCCCATGGAATCACTAAGAG...GTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CCA 90 bp | GTCTTGCTCTTAGTGATTCCATGGGAGAAAATGGAATTGGAGGTACTAGTAGAACTTGTTCTGACATCTTaGGAAAAACTGTCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: VLLLVIPWEKMELEVLVELVLTS*EKLSTV Trigger: CACTGTGGACAGTTTTTCCCAAGATGTCAGAACAAG...TTCTACTAGTACCTCCAATTCCATTTTCTCCCATGGAATCACTAAGAGCAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR GCA 90 bp | TGGAGTTTCTTCAAATGTGGTCTGATTGTTTACATAAGTGCAGCAAGAGTAGCAGCTGACTTCAGACTTTaGCTGCAGTTCATATTGGTT | + |
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Preference number: 4 (lower is better) Translates to: WSFFKCGLIVYISAARVAADFRL*LQFILV Trigger: AACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGC...TGCTACTCTTGCTGCACTTATGTAAACAATCAGACCACATTTGAAGAAACTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR GCA 90 bp | ATGTGGTCTGATTGTTTACATAAGTGCAGCAAGAGTAGCAATGGACCATGTAGGGATTGTTTACATAAGTaGAGCAAGAGTAGCAATGGA | + |
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Preference number: 4 (lower is better) Translates to: MWSDCLHKCSKSSNGPCRDCLHK*SKSSNG Trigger: TCCATTGCTACTCTTGCTGCACTTATGTAAACAATC...CCTACATGGTCCATTGCTACTCTTGCTGCACTTATGTAAACAATCAGACCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR CCA 90 bp | ATAAGTGCAGCAAGAGTAGCAATGGACCATGTAGGCTGTCTTCTAAAATTTTCTAATGTTCTTCCTGCTTaGTCTAGGCTGGGAATATTA | + |
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Preference number: 4 (lower is better) Translates to: ISAARVAMDHVGCLLKFSNVLPA*SRLGIL Trigger: TAATATTCCCAGCCTAGACCAAGCAGGAAGAACATT...AGAAAATTTTAGAAGACAGCCTACATGGTCCATTGCTACTCTTGCTGCACTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244296.6 |
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| CDS-3UTR GCA 90 bp | GAAGATATCAGCCTGTTTGTTAAAGTTTTCGAAGTTCTTAGACAAATTTGGAGGATTCTCATGAATAGTTaGCCAATTCTGGGGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: EDISLFVKVFEVLRQIWRILMNS*PILGQS Trigger: TGACTGCCCCAGAATTGGGCAACTATTCATGAGAAT...CCTCCAAATTTGTCTAAGAACTTCGAAAACTTTAACAAACAGGCTGATATCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244296.6 |
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| CDS-3UTR CCA 90 bp | TGTTTACATAAGTGCAGCAAGAGTAGCAATGGACCATGTAGGCTGTCTTCTAAATGTTTGCAAAATAGGTaGAGTTTCTTCAAATGTGGT | + |
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Preference number: 4 (lower is better) Translates to: CLHKCSKSSNGPCRLSSKCLQNR*SFFKCG Trigger: ACCACATTTGAAGAAACTCCACCTATTTTGCAAACA...TTTAGAAGACAGCCTACATGGTCCATTGCTACTCTTGCTGCACTTATGTAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR CCA 90 bp | AATAGGTGGAGTTTCTTCAAATGTGGTCTGATTGTTTACATAAGTGCAGCAAGATGTTTGCAAAATAGGTaGAGTTTCTTCAAATGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NRWSFFKCGLIVYISAARCLQNR*SFFKCG Trigger: ACCACATTTGAAGAAACTCCACCTATTTTGCAAACA...TCTTGCTGCACTTATGTAAACAATCAGACCACATTTGAAGAAACTCCACCTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244296.6 ENST00000312439.10 |
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| CDS-3UTR CAA 90 bp | TGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCTTGCTCTTAGTGATATCTGACACTCTGTaGTTACTCTCAGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: CPPPAYRASGTEWVLLLVISDTL*LLSEAT Trigger: AGTAGCTTCTGAGAGTAACAACAGAGTGTCAGATAT...CACTAAGAGCAAGACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CAA 90 bp | GGCTTCTGGAACAGAGTGGGTCTTGCTCTTAGTGATTCCATGGGAGAAAATGGAATATCTGACACTCTGTaGTTACTCTCAGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: GFWNRVGLALSDSMGENGISDTL*LLSEAT Trigger: AGTAGCTTCTGAGAGTAACAACAGAGTGTCAGATAT...TCCATTTTCTCCCATGGAATCACTAAGAGCAAGACCCACTCTGTTCCAGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CAA 90 bp | AATTCTAATGACTGCATTATCCTGCCAAGTGAAAGAGGCAGGCATGAGCAAGGATGGGAGAAAATGGAATaGGAGGTACTAGTAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: NSNDCIILPSERGRHEQGWEKME*EVLVEF Trigger: GAATTCTACTAGTACCTCCAATTCCATTTTCTCCCA...TCCTTGCTCATGCCTGCCTCTTTCACTTGGCAGGATAATGCAGTCATTAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CAA 90 bp | CTTCACGTACAAGGGTTTTCCCATGAAATTTACATTGAGTTGTCCACCTCCAGCATATCTGACACTCTGTaGTTACTCTCAGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: LHVQGFSHEIYIELSTSSISDTL*LLSEAT Trigger: AGTAGCTTCTGAGAGTAACAACAGAGTGTCAGATAT...GCTGGAGGTGGACAACTCAATGTAAATTTCATGGGAAAACCCTTGTACGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CAA 90 bp | TCTGTTGTTATGGTGTCGAATATTTTGGTGAGTTCTGAGTGGCTCATGCTTCACTGGGAGAAAATGGAATaGGAGGTACTAGTAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: SVVMVSNILVSSEWLMLHWEKME*EVLVEF Trigger: GAATTCTACTAGTACCTCCAATTCCATTTTCTCCCA...GTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000403380.7 ENST00000436291.7 |
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| CDS-3UTR CAA 90 bp | ATTTTGGTGAGTTCTGAGTGGCTCATGCTTCACGTACAAGGGTTTTCCCATGAACAGTTTGAGCATCTGTaGTTATGGTGTCGAATATTT | + |
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Preference number: 5 (lower is better) Translates to: ILVSSEWLMLHVQGFSHEQFEHL*LWCRIF Trigger: AAATATTCGACACCATAACAACAGATGCTCAAACTG...TTCATGGGAAAACCCTTGTACGTGAAGCATGAGCCACTCAGAACTCACCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CAA 90 bp | GAGTCTTGTTCTGACATCTTGGGAAAAACTGTCCACAGTGTGAAGTCATCCACTCAGTTTGAGCATCTGTaGTTATGGTGTCGAATATTT | + |
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Preference number: 5 (lower is better) Translates to: ESCSDILGKTVHSVKSSTQFEHL*LWCRIF Trigger: AAATATTCGACACCATAACAACAGATGCTCAAACTG...AGTGGATGACTTCACACTGTGGACAGTTTTTCCCAAGATGTCAGAACAAGACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CAA 90 bp | TCTGTTGTTATGGTGTCGAATATTTTGGTGAGTTCTGAGTGGCTCATGCTTCACATATCTGACACTCTGTaGTTACTCTCAGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: SVVMVSNILVSSEWLMLHISDTL*LLSEAT Trigger: AGTAGCTTCTGAGAGTAACAACAGAGTGTCAGATAT...GTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS-3UTR CAA 90 bp | TCTGTTGTTATGGTGTCGAATATTTTGGTGAGTTCTGAGTGGCTCATGCTTCACCAGTTTGAGCATCTGTaGTTATGGTGTCGAATATTT | + |
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Preference number: 5 (lower is better) Translates to: SVVMVSNILVSSEWLMLHQFEHL*LWCRIF Trigger: AAATATTCGACACCATAACAACAGATGCTCAAACTG...GTGAAGCATGAGCCACTCAGAACTCACCAAAATATTCGACACCATAACAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000595124.5 ENST00000595356.5 |
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| CDS CCA 72 bp | CAGGAGCTGGGAGTGGGTAGAATCAGAAGTTGTTCATaGGTGTGCAGTTTCAGTTATGCAAGGTGGGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: QELGVGRIRSCS*VCSFSYARWGG Trigger: ACCTCCCCACCTTGCATAACTGAAACTGCACACCCATGAACAACTTCTGATTCTACCCACTCCCAGCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602039.1 |
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| CDS GCA 72 bp | CTGGGAGTGGGTAGAATCAGAAGTTGTTCATGGGTGTaGAGTTTCAGTTATGCAAGGTGGGGAGGTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: LGVGRIRSCSWV*SFSYARWGGSR Trigger: TCTAGAACCTCCCCACCTTGCATAACTGAAACTGCACACCCATGAACAACTTCTGATTCTACCCACTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602039.1 |
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| CDS CAA 72 bp | TGCTTCACGTACAAGGGTTTTCCCATGAAATTTACATaGAGTTGTCCACCTCCAGCTTATAGGGCTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CFTYKGFPMKFT*SCPPPAYRASE Trigger: CTCTGAAGCCCTATAAGCTGGAGGTGGACAACTCAATGTAAATTTCATGGGAAAACCCTTGTACGTGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595124.5 ENST00000595356.5 |
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| CDS CCA 72 bp | TCTGGAACAGAGTGGGTCTTGCTCTTAGTGATTCCATaGGAGAAAATGGAATTGGAGGTACTAGTAGAATTC | + |
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Preference number: 6 (lower is better) Translates to: SGTEWVLLLVIP*EKMELEVLVEF Trigger: GAATTCTACTAGTACCTCCAATTCCATTTTCTCCCATGGAATCACTAAGAGCAAGACCCACTCTGTTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000403380.7 ENST00000436291.7 ENST00000602039.1 |
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| CDS TCA 72 bp | AATGTTTCAATTACGGTTCCCAGAAGTATAGTTTATTaGACTGCTATAAGCAGAGACTTCGACTGTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: NVSITVPRSIVY*TAISRDFDCHG Trigger: TCCATGACAGTCGAAGTCTCTGCTTATAGCAGTTCAATAAACTATACTTCTGGGAACCGTAATTGAAACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312439.10 |
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| CDS CAA 72 bp | AAATGTTTCAATTACGGTTCCCAGAAGTATAGTTTATaGAACTGCTATAAGCAGAGACTTCGACTGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: KCFNYGSQKYSL*NCYKQRLRLSW Trigger: CCATGACAGTCGAAGTCTCTGCTTATAGCAGTTCAATAAACTATACTTCTGGGAACCGTAATTGAAACATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312439.10 |
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