Pregenerated sensors for PSENEN (Homo sapiens)
Ensembl gene IDs: ENSG00000205155Ensembl transcript IDs: ENST00000222266.2, ENST00000587708.7, ENST00000591949.1
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGTAGCATCGTaGTCTACACTTCTGATGAGAATACTGCAGCCCACAGTAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: FVTRLGPDKSQEVAS*STLLMRILQPTVGK Trigger: CTTTCCTACTGTGGGCTGCAGTATTCTCATCAGAAGTGTAGATCACGATGCTACTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR TCA 90 bp | CTTCTGATGAGAATACTGCAGCCCACAGTAGGAAAGTTATATTTTTaGATTCACGACTACCAGTACAGGATAACAGCCCCTAGAAATGGA | + |
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Preference number: 1 (lower is better) Translates to: LLMRILQPTVGKLYF*IHDYQYRITAPRNG Trigger: TCCATTTCTAGGGGCTGTTATCCTGTACTGGTAGTCGTGAATTCAAAAATATAACTTTCCTACTGTGGGCTGCAGTATTCTCATCAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR TCA 90 bp | AATGGAAGCACTATTCCTTTCTTAGTTTCTCATCTAATAGTTTCCTaGGCAGGAAAGTTCCTAGTTCAGAAGATTATGAGTAGTATGCAC | + |
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Preference number: 1 (lower is better) Translates to: NGSTIPFLVSHLIVS*AGKFLVQKIMSSMH Trigger: GTGCATACTACTCATAATCTTCTGAACTAGGAACTTTCCTGCTCAGGAAACTATTAGATGAGAAACTAAGAAAGGAATAGTGCTTCCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGTGCCCAGGGGTATGGTaGAGGAGAGGTAGTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLSWENKQGPSMCRSCQGCPGVW*RRGSPQ Trigger: TTGGGGACTACCTCTCCTTCACCATACCCCTGGGCA...CCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGATGGGAAACAGAAGCTaGAAGGGTTGGCCTCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: ACPGRISRAPVCAEVVRGMGNRS*KGWPPA Trigger: AGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCAT...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGCAAGTCTTAGGAGTTTaGGAAGGGGCTCCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: ACPGRISRAPVCAEVVRGQVLGV*EGAPRT Trigger: TGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTG...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGTTAAGGAGCCTGTCCTaGGAGAATAAGCAGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SLSWENKQGPSMCRSCQGLRSLS*ENKQGP Trigger: GGGGCCCTGCTTATTCTCCCAGGACAGGCTCCTTAA...CCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGAGAGAACGTGGGACATaGAAACAAGTCTTAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: SLSWENKQGPSMCRSCQGRERGT*KQVLGV Trigger: AACTCCTAAGACTTGTTTTCATGTCCCACGTTCTCT...CCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| 3UTR-3UTR CCA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAATTAAGGAGCCTGTCCTaGGAGAATAAGCAGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SKVRVLYWGMSAENVGHELRSLS*ENKQGP Trigger: GGGGCCCTGCTTATTCTCCCAGGACAGGCTCCTTAA...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| 3UTR-3UTR TCA 90 bp | TATCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGCAAGTCTTAGGAGTTTaGGAAGGGGCTCCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: YRKLGSFIGGCQQRTWDMQVLGV*EGAPRT Trigger: TGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTG...CATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR-3UTR GCA 90 bp | AACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGTACAGGACAGGCTCCTCTaGTTTAAGGAGCCTGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NGKLPFVTRLGPDKSQEVQDRLL*FKEPVL Trigger: CAGGACAGGCTCCTTAAAGCAGAGGAGCCTGTCCTG...TACTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCACAGTAGGAAAGTTATATTTTTGAATTCACGACTACCAGTACAGGATTTAAGGAGCCTGTCCTaGGAGAATAAGCAGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: AAHSRKVIFLNSRLPVQDLRSLS*ENKQGP Trigger: GGGGCCCTGCTTATTCTCCCAGGACAGGCTCCTTAA...ATCCTGTACTGGTAGTCGTGAATTCAAAAATATAACTTTCCTACTGTGGGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR-3UTR CCA 90 bp | AAAACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGGTTAGGGTCCTTTATTaGGGGATGTCAGCAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KTGNFHLSHVLVQINPRKVRVLY*GMSAEN Trigger: GTTCTCTGCTGACATCCCCCAATAAAGGACCCTAAC...CTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR-3UTR CCA 90 bp | GAAAACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAATGTCAGCAGAGAACGTaGGACATGAAAACAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ENGKLPFVTRLGPDKSQECQQRT*DMKTSL Trigger: AAGACTTGTTTTCATGTCCCACGTTCTCTGCTGACA...TTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR-3UTR TCA 90 bp | TTATTTTTGCAGACAACACTTCCTTCAGAAAACGGGAAACTTCCATTTGTCACACATCTAATAGTTTCCTaGGCAGGAAAGTTCCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: LFLQTTLPSENGKLPFVTHLIVS*AGKFLV Trigger: AACTAGGAACTTTCCTGCTCAGGAAACTATTAGATG...TGTGACAAATGGAAGTTTCCCGTTTTCTGAAGGAAGTGTTGTCTGCAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR-3UTR CAA 90 bp | AGCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGACAAGTCTTAGGAGTTaGAGAAGGGGCTCCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: SLSWENKQGPSMCRSCQGTSLRS*RRGSQD Trigger: GTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGT...CCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| 3UTR-3UTR CAA 90 bp | GATCCCAGGAAGTCAGTATCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAACAAGTCTTAGGAGTTaGAGAAGGGGCTCCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: DPRKSVSKVRVLYWGMSATSLRS*RRGSQD Trigger: GTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGT...TGCTGACATCCCCCAATAAAGGACCCTAACTTTCGATACTGACTTCCTGGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| 3UTR TCA 72 bp | CGTCTTGGTCCAGATAAATCCCAGGAAGTAGCATCGTaGTCTACACTTCTGATGAGAATACTGCAGCCCACA | + |
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Preference number: 3 (lower is better) Translates to: RLGPDKSQEVAS*STLLMRILQPT Trigger: TGTGGGCTGCAGTATTCTCATCAGAAGTGTAGATCACGATGCTACTTCCTGGGATTTATCTGGACCAAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR GCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGCTCCAGGTTCATAGCTaGGCTGGGGCCGGGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: ACPGRISRAPVCAEVVRGLQVHS*AGAGSS Trigger: GGACGACCCGGCCCCAGCGCAGCTATGAACCTGGAG...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCGTCGTCCCAAGGGTCTaGGGGGCAAGACCCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RHLSWETEAGRVGLRLLSVVPRV*GARPKP Trigger: AGGCTTGGGTCTTGCCCCGCAGACCCTTGGGACGAC...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGGGGTTGGCCTCCGGCTaGTCTCCAGACTTCCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: ACPGRISRAPVCAEVVRGGLASG*SPDFPR Trigger: TCTAGGGAAGTCTGGAGAGCAGCCGGAGGCCAACCC...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR TCA 90 bp | GCCCCTAGAAATGGAAGCACTAGGCCGATCCTACCACTGCACTCCAGCCTGGCTGAGGAAGCCCACAGCTaGGCGCCAGACATAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: APRNGSTRPILPLHSSLAEEAHS*APDIAF Trigger: AAAGGCTATGTCTGGCGCTCAGCTGTGGGCTTCCTC...AGCCAGGCTGGAGTGCAGTGGTAGGATCGGCCTAGTGCTTCCATTTCTAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR CCA 90 bp | TGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCAGACTTCAGAAGCTGGAAGGGTTaGCCTCCGGCTGCTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CHGKQKLEGLASGCSPDFRSWKG*PPAALQ Trigger: CTGGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCT...GAAGTCTGGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR TCA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCTGCCCAGGGGTATGGTaGAGGAGAGGTAGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: RHLSWETEAGRVGLRLLSCPGVW*RRGSPQ Trigger: TTGGGGACTACCTCTCCTTCACCATACCCCTGGGCA...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR TCA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCGAGGAAGCCCACAGCTaGGCGCCAGACATCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RHLSWETEAGRVGLRLLSEEAHS*APDICH Trigger: ATGACAGATGTCTGGCGCTCAGCTGTGGGCTTCCTC...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | AGCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGCAGGGCCCCAGTATGTaGAGAAGTTGTCAGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLSWENKQGPSMCRSCQGQGPSM*RSCQGV Trigger: CACCCCCTGACAACTTCTGCACATACTGGGGCCCTG...CCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGCAGGACAGGCTCCTCTaGTTTAAGGAGCCTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ACPGRISRAPVCAEVVRGQDRLL*FKEPVL Trigger: CAGGACAGGCTCCTTAAAGCAGAGGAGCCTGTCCTG...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGCTCACTTCCTCCGGCTaGGGTGCCTTAGCTACTTTC | + |
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Preference number: 4 (lower is better) Translates to: ACPGRISRAPVCAEVVRGLTSSG*GALATF Trigger: GAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGTGAG...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGTCAGTTATGGACGTTTaGGCGAGACGCCCCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: ACPGRISRAPVCAEVVRGSVMDV*ARRPRF Trigger: AAACCTGGGGCGTCTCGCGCAAACGTCCATAACTGA...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGGTCGTCCCAAGGGTCTaGGGGGCAAGACCCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRVVPRV*GARPKP Trigger: AGGCTTGGGTCTTGCCCCGCAGACCCTTGGGACGAC...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCCTGTTCTGTGTAGGCTaGGACAAGGAAGGCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: RHLSWETEAGRVGLRLLSLFCVG*DKEGLS Trigger: CGAGAGGCCTTCCTTGTCCCAGCCTACACAGAACAG...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCTTAAGGAGCCTGTCCTaGGAGAATAAGCAGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RHLSWETEAGRVGLRLLSLRSLS*ENKQGP Trigger: GGGGCCCTGCTTATTCTCCCAGGACAGGCTCCTTAA...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | TGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCAGACTTCATGGGAAACAGAAGCTaGAAGGGTTGGCCTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: CHGKQKLEGLASGCSPDFMGNRS*KGWPPA Trigger: AGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCAT...GAAGTCTGGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR TCA 90 bp | TGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCAGACTTCCAAGTCTTAGGAGTTTaGGAAGGGGCTCCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: CHGKQKLEGLASGCSPDFQVLGV*EGAPRT Trigger: TGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTG...GAAGTCTGGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAACTCCAGGTTCATAGCTaGGCTGGGGCCGGGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SKVRVLYWGMSAENVGHELQVHS*AGAGSS Trigger: GGACGACCCGGCCCCAGCGCAGCTATGAACCTGGAG...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR GCA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCTTCCTCCGGCTGGGGTaGCTTAGCTACTTTCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: RHLSWETEAGRVGLRLLSFLRLG*LSYFQL Trigger: TAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAA...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | TATCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGGTCGTCCCAAGGGTCTaGGGGGCAAGACCCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: YRKLGSFIGGCQQRTWDMVVPRV*GARPKP Trigger: AGGCTTGGGTCTTGCCCCGCAGACCCTTGGGACGAC...CATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR GCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGCAGGGCCCCAGTATGTaGAGAAGTTGTCAGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRQGPSM*RSCQGV Trigger: CACCCCCTGACAACTTCTGCACATACTGGGGCCCTG...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | AACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGTACTCCAGGTTCATAGCTaGGCTGGGGCCGGGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: NGKLPFVTRLGPDKSQEVLQVHS*AGAGSS Trigger: GGACGACCCGGCCCCAGCGCAGCTATGAACCTGGAG...TACTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR GCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGCAGGACAGGCTCCTCTaGTTTAAGGAGCCTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRQDRLL*FKEPVL Trigger: CAGGACAGGCTCCTTAAAGCAGAGGAGCCTGTCCTG...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGTCAATTTCTCCTCATTaGACACTCGCTCCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ACPGRISRAPVCAEVVRGSISPH*TLAPGS Trigger: TGAACCTGGAGCGAGTGTCCAATGAGGAGAAATTGA...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGCTGTTCTGTGTAGGCTaGGACAAGGAAGGCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRLFCVG*DKEGLS Trigger: CGAGAGGCCTTCCTTGTCCCAGCCTACACAGAACAG...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS-3UTR TCA 90 bp | CGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAAGAGGAAGCCCACAGCTaGGCGCCAGACATAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RKLGSFIGGCQQRTWDMKEEAHS*APDIAF Trigger: AAAGGCTATGTCTGGCGCTCAGCTGTGGGCTTCCTC...TTTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR TCA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAATGCCCAGGGGTATGGTaGAGGAGAGGTAGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SKVRVLYWGMSAENVGHECPGVW*RRGSPQ Trigger: TTGGGGACTACCTCTCCTTCACCATACCCCTGGGCA...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR TCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGCAAGTCTTAGGAGTTTaGGAAGGGGCTCCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRQVLGV*EGAPRT Trigger: TGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTG...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS-3UTR GCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGACCCTAAGTAACAGATaGAAGGATCACGAACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ACPGRISRAPVCAEVVRGTLSNR*KDHEQP Trigger: TGGTTGTTCGTGATCCTTGCATCTGTTACTTAGGGT...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGTGTCAGCAGAGAACGTaGGACATGAAAACAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACPGRISRAPVCAEVVRGCQQRT*DMKTSL Trigger: AAGACTTGTTTTCATGTCCCACGTTCTCTGCTGACA...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| CDS-3UTR TCA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCAGAGAACGTGGGACATaGAAACAAGTCTTAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHLSWETEAGRVGLRLLSRERGT*KQVLGV Trigger: AACTCCTAAGACTTGTTTTCATGTCCCACGTTCTCT...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| CDS-3UTR GCA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAACAGGACAGGCTCCTCTaGTTTAAGGAGCCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKVRVLYWGMSAENVGHEQDRLL*FKEPVL Trigger: CAGGACAGGCTCCTTAAAGCAGAGGAGCCTGTCCTG...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
||
| CDS-3UTR CCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGAGCTACTTTCAGTTATaGACGTTTGCGCGAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRSYFQL*TFARDA Trigger: GGCGTCTCGCGCAAACGTCCATAACTGAAAGTAGCT...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000591949.1 |
||
| CDS-3UTR CCA 90 bp | CGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAACTCACTTCCTCCGGCTaGGGTGCCTTAGCTACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLGSFIGGCQQRTWDMKLTSSG*GALATF Trigger: GAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGTGAG...TTTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
||
| CDS-3UTR CCA 90 bp | GTATCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATCTCACTTCCTCCGGCTaGGGTGCCTTAGCTACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSKVRVLYWGMSAENVGHLTSSG*GALATF Trigger: GAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGTGAG...ATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR CCA 90 bp | CGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAATTAAGGAGCCTGTCCTaGGAGAATAAGCAGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKLGSFIGGCQQRTWDMKLRSLS*ENKQGP Trigger: GGGGCCCTGCTTATTCTCCCAGGACAGGCTCCTTAA...TTTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
||
| CDS-3UTR CCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGGCCAGACATCTGTCATaGGAAACAGAAGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRARHLS*ETEAGR Trigger: CCTTCCAGCTTCTGTTTCCCATGACAGATGTCTGGC...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| 3UTR CAA 72 bp | CAGAGAACGTGGGACATGAAAACAAGTCTTAGGAGTTaGAGAAGGGGCTCCCAGGACAGGCTCCTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRTWDMKTSLRS*RRGSQDRLLCF Trigger: AAAGCAGAGGAGCCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
||
| CDS-3UTR TCA 90 bp | AACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGTATGCCCAGGGGTATGGTaGAGGAGAGGTAGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NGKLPFVTRLGPDKSQEVCPGVW*RRGSPQ Trigger: TTGGGGACTACCTCTCCTTCACCATACCCCTGGGCA...TACTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR GCA 90 bp | CGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAATCAGTTATGGACGTTTaGGCGAGACGCCCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKLGSFIGGCQQRTWDMKSVMDV*ARRPRF Trigger: AAACCTGGGGCGTCTCGCGCAAACGTCCATAACTGA...TTTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222266.2 |
||
| CDS-3UTR GCA 90 bp | AACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGTACAGGGCCCCAGTATGTaGAGAAGTTGTCAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NGKLPFVTRLGPDKSQEVQGPSM*RSCQGV Trigger: CACCCCCTGACAACTTCTGCACATACTGGGGCCCTG...TACTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR TCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGAGAACCAGAAGATGTTaGCCAACCAGAGAAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRRTRRC*PTREKA Trigger: TGCCTTTTCTCTGGTTGGTCAACATCTTCTGGTTCT...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
||
| CDS-3UTR TCA 90 bp | AGGATAACAGCCCCTAGAAATGGAAGCACTAGGCCGATCCTACCACTGCACTCCAGAGAACGTGGGACATaGAAACAAGTCTTAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RITAPRNGSTRPILPLHSRERGT*KQVLGV Trigger: AACTCCTAAGACTTGTTTTCATGTCCCACGTTCTCT...GGAGTGCAGTGGTAGGATCGGCCTAGTGCTTCCATTTCTAGGGGCTGTTATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR GCA 90 bp | CGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAATTCCTCCGGCTGGGGTaGCTTAGCTACTTTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RKLGSFIGGCQQRTWDMKFLRLG*LSYFQL Trigger: TAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAA...TTTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCACAGTAGGAAAGTTATATTTTTGAATTCACGACTACCAGTACAGGATGGCCGATCCTACCACTaGACTCCAGCCTGGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AAHSRKVIFLNSRLPVQDGRSYH*TPAWLT Trigger: TGTCAGCCAGGCTGGAGTGCAGTGGTAGGATCGGCC...ATCCTGTACTGGTAGTCGTGAATTCAAAAATATAACTTTCCTACTGTGGGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR CCA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAAGCTACTTTCAGTTATaGACGTTTGCGCGAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKVRVLYWGMSAENVGHESYFQL*TFARDA Trigger: GGCGTCTCGCGCAAACGTCCATAACTGAAAGTAGCT...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222266.2 |
||
| CDS-3UTR CCA 90 bp | AAAACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGCTGTTCTGTGTAGGCTaGGACAAGGAAGGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KTGNFHLSHVLVQINPRKLFCVG*DKEGLS Trigger: CGAGAGGCCTTCCTTGTCCCAGCCTACACAGAACAG...CTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR TCA 90 bp | CGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAAGCCAGACATAGCCTTTaGTTTGGCTCTGTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKLGSFIGGCQQRTWDMKARHSL*FGSVLC Trigger: ACACAGAACAGAGCCAAATCAAAGGCTATGTCTGGC...TTTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
||
| CDS-3UTR TCA 90 bp | AACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGTACAAGTCTTAGGAGTTTaGGAAGGGGCTCCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NGKLPFVTRLGPDKSQEVQVLGV*EGAPRT Trigger: TGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTG...TACTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR TCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGAGAGAACGTGGGACATaGAAACAAGTCTTAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRRERGT*KQVLGV Trigger: AACTCCTAAGACTTGTTTTCATGTCCCACGTTCTCT...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGTGTCAGCAGAGAACGTaGGACATGAAAACAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRCQQRT*DMKTSL Trigger: AAGACTTGTTTTCATGTCCCACGTTCTCTGCTGACA...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS-3UTR CCA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAGTTAGGGTCCTTTATTaGGGGATGTCAGCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKVRVLYWGMSAENVGHEVRVLY*GMSAEN Trigger: GTTCTCTGCTGACATCCCCCAATAAAGGACCCTAAC...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR TCA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAAGAACCAGAAGATGTTaGCCAACCAGAGAAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKVRVLYWGMSAENVGHERTRRC*PTREKA Trigger: TGCCTTTTCTCTGGTTGGTCAACATCTTCTGGTTCT...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
||
| CDS-3UTR TCA 90 bp | GTATCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATAGAACCAGAAGATGTTaGCCAACCAGAGAAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKVRVLYWGMSAENVGHRTRRC*PTREKA Trigger: TGCCTTTTCTCTGGTTGGTCAACATCTTCTGGTTCT...ATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR CCA 90 bp | CGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAATCAATTTCTCCTCATTaGACACTCGCTCCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKLGSFIGGCQQRTWDMKSISPH*TLAPGS Trigger: TGAACCTGGAGCGAGTGTCCAATGAGGAGAAATTGA...TTTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
||
| CDS-3UTR TCA 90 bp | AACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGTAGCCAGACATAGCCTTTaGTTTGGCTCTGTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGKLPFVTRLGPDKSQEVARHSL*FGSVLC Trigger: ACACAGAACAGAGCCAAATCAAAGGCTATGTCTGGC...TACTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCACAGTAGGAAAGTTATATTTTTGAATTCACGACTACCAGTACAGGATTTCCTCCGGCTGGGGTaGCTTAGCTACTTTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AAHSRKVIFLNSRLPVQDFLRLG*LSYFQL Trigger: TAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAA...ATCCTGTACTGGTAGTCGTGAATTCAAAAATATAACTTTCCTACTGTGGGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR TCA 90 bp | CCTCTAAAAGATCCCAGGAAGTCAGTATCGAAAGTTAGGGTCCTTTATTGGGGGCATCTAATAGTTTCCTaGGCAGGAAAGTTCCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLKDPRKSVSKVRVLYWGHLIVS*AGKFLV Trigger: AACTAGGAACTTTCCTGCTCAGGAAACTATTAGATG...CCCCCAATAAAGGACCCTAACTTTCGATACTGACTTCCTGGGATCTTTTAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR CCA 90 bp | AACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGTATGTCAGCAGAGAACGTaGGACATGAAAACAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NGKLPFVTRLGPDKSQEVCQQRT*DMKTSL Trigger: AAGACTTGTTTTCATGTCCCACGTTCTCTGCTGACA...TACTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCACAGTAGGAAAGTTATATTTTTGAATTCACGACTACCAGTACAGGATTCAATTTCTCCTCATTaGACACTCGCTCCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAHSRKVIFLNSRLPVQDSISPH*TLAPGS Trigger: TGAACCTGGAGCGAGTGTCCAATGAGGAGAAATTGA...ATCCTGTACTGGTAGTCGTGAATTCAAAAATATAACTTTCCTACTGTGGGCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCACAGTAGGAAAGTTATATTTTTGAATTCACGACTACCAGTACAGGATACCCTAAGTAACAGATaGAAGGATCACGAACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: AAHSRKVIFLNSRLPVQDTLSNR*KDHEQP Trigger: TGGTTGTTCGTGATCCTTGCATCTGTTACTTAGGGT...ATCCTGTACTGGTAGTCGTGAATTCAAAAATATAACTTTCCTACTGTGGGCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR TCA 90 bp | TTATTTTTGCAGACAACACTTCCTTCAGAAAACGGGAAACTTCCATTTGTCACACAGGAAGTAGCATCGTaGTCTACACTTCTGATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFLQTTLPSENGKLPFVTQEVAS*STLLMR Trigger: TCTCATCAGAAGTGTAGATCACGATGCTACTTCCTG...TGTGACAAATGGAAGTTTCCCGTTTTCTGAAGGAAGTGTTGTCTGCAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS GCA 90 bp | CAGGTTCAATTTCTCCTCATTGGACACTCGCTCCAGGTTCATAGCTaGGCTGGGGCCGGGTCGTCCCAAGGGTCTGCGGGGCAAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVQFLLIGHSLQVHS*AGAGSSQGSAGQDP Trigger: TGGGTCTTGCCCCGCAGACCCTTGGGACGACCCGGCCCCAGCGCAGCTATGAACCTGGAGCGAGTGTCCAATGAGGAGAAATTGAACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS CCA 90 bp | GGGCAAGACCCAAGCCTTGACCCAGGAGAGCTCACTTCCTCCGGCTaGGGTGCCTTAGCTACTTTCAGTTATGGACGTTTGCGCGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: GQDPSLDPGELTSSG*GALATFSYGRLRET Trigger: CGTCTCGCGCAAACGTCCATAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGTGAGCTCTCCTGGGTCAAGGCTTGGGTCTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222266.2 |
||
| CDS-3UTR CAA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCCAGTATGTGCAGAAGTaGTCAGGGGGTGCCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHLSWETEAGRVGLRLLSQYVQK*SGGAQG Trigger: CCCCTGGGCACCCCCTGACAACTTCTGCACATACTG...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| CDS GCA 90 bp | GACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTaGTCTCCAGACTTCCCTAGACCAGCCTTCCCTTCTCACCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DICHGKQKLEGLASG*SPDFPRPAFPSHPE Trigger: CTCTGGGTGAGAAGGGAAGGCTGGTCTAGGGAAGTCTGGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| CDS CCA 90 bp | AGGATCACGAACAACCACGCCCCAGGAGAGCTCACTTCCTCCGGCTaGGGTGCCTTAGCTACTTTCAGTTATGGACGTTTGCGCGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: RITNNHAPGELTSSG*GALATFSYGRLRET Trigger: CGTCTCGCGCAAACGTCCATAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGTGAGCTCTCCTGGGGCGTGGTTGTTCGTGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| CDS GCA 90 bp | AAGGGTCTGCGGGGCAAGACCCAAGCCTTGACCCTAAGTAACAGATaGAAGGATCACGAACAACCACGCCCCAGGAGAGCTCACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGLRGKTQALTLSNR*KDHEQPRPRRAHFL Trigger: GAGGAAGTGAGCTCTCCTGGGGCGTGGTTGTTCGTGATCCTTGCATCTGTTACTTAGGGTCAAGGCTTGGGTCTTGCCCCGCAGACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587708.7 ENST00000591949.1 |
||
| CDS-3UTR CAA 90 bp | AGGATAACAGCCCCTAGAAATGGAAGCACTAGGCCGATCCTACCACTGCACTCCCAGTATGTGCAGAAGTaGTCAGGGGGTGCCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RITAPRNGSTRPILPLHSQYVQK*SGGAQG Trigger: CCCCTGGGCACCCCCTGACAACTTCTGCACATACTG...GGAGTGCAGTGGTAGGATCGGCCTAGTGCTTCCATTTCTAGGGGCTGTTATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
||
| CDS-3UTR CAA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGGGCAAGACCCAAGCCTaGACCCTAAGTAACAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: ACPGRISRAPVCAEVVRGGKTQA*TLSNRC Trigger: GCATCTGTTACTTAGGGTCAAGGCTTGGGTCTTGCC...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| CDS-3UTR CAA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGCAGAAGCTGGAAGGGTaGGCCTCCGGCTGCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRQKLEG*ASGCSP Trigger: TGGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTG...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| CDS CCA 90 bp | AGAGCTCACTTCCTCCGGCTGGGGTGCCTTAGCTACTTTCAGTTATaGACGTTTGCGCGAGACGCCCCAGGTTTCCCTGGAGATTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAHFLRLGCLSYFQL*TFARDAPGFPGDCS Trigger: ACTACAATCTCCAGGGAAACCTGGGGCGTCTCGCGCAAACGTCCATAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGTGAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
||
| CDS-3UTR CAA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGGGCAAGACCCAAGCCTaGACCCAGGAGAGCTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRGKTQA*TQESSL Trigger: AAGTGAGCTCTCCTGGGTCAAGGCTTGGGTCTTGCC...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000222266.2 |
||
| CDS-3UTR CAA 90 bp | AGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCCTCACAGCCTTTGATTaGGCTCTGTTCTGTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHLSWETEAGRVGLRLLSLTAFD*ALFCVG Trigger: GCCTACACAGAACAGAGCCAAATCAAAGGCTGTGAG...GGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CAA 90 bp | AGCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGCAGAGCCCCAACATTTaGGATCCTCCATTGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: SLSWENKQGPSMCRSCQGQSPNI*DPPLSL Trigger: AAGGGACAATGGAGGATCCAAAATGTTGGGGCTCTG...CCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CAA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGTTCAGTTATGGACGTTaGCGCGAGACGCCCCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRFSYGR*RETPQV Trigger: AACCTGGGGCGTCTCGCGCAAACGTCCATAACTGAA...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000591949.1 |
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| CDS-3UTR CAA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAACAGTATGTGCAGAAGTaGTCAGGGGGTGCCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SKVRVLYWGMSAENVGHEQYVQK*SGGAQG Trigger: CCCCTGGGCACCCCCTGACAACTTCTGCACATACTG...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | GCCTGTCCTGGGAGAATAAGCAGGGCCCCAGTATGTGCAGAAGTTGTCAGGGGGATTTTGGATCCTCCATaGTCCCTTCCCACCAAGATT | + |
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Preference number: 5 (lower is better) Translates to: ACPGRISRAPVCAEVVRGILDPP*SLPTKI Trigger: AATCTTGGTGGGAAGGGACAATGGAGGATCCAAAAT...CCCCCTGACAACTTCTGCACATACTGGGGCCCTGCTTATTCTCCCAGGACAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CAA 90 bp | TGTCATGGGAAACAGAAGCTGGAAGGGTTGGCCTCCGGCTGCTCTCCAGACTTCAAGAACCAGAAGATGTaGACCAACCAGAGAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: CHGKQKLEGLASGCSPDFKNQKM*TNQRKG Trigger: GCCTTTTCTCTGGTTGGTCAACATCTTCTGGTTCTT...GAAGTCTGGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CAA 90 bp | AGGATAACAGCCCCTAGAAATGGAAGCACTAGGCCGATCCTACCACTGCACTCCACGGGAAACTTCCATTaGTCACACGTCTTGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RITAPRNGSTRPILPLHSTGNFH*SHVLVQ Trigger: CTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGT...GGAGTGCAGTGGTAGGATCGGCCTAGTGCTTCCATTTCTAGGGGCTGTTATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAATTCAGTTATGGACGTTaGCGCGAGACGCCCCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: SKVRVLYWGMSAENVGHEFSYGR*RETPQV Trigger: AACCTGGGGCGTCTCGCGCAAACGTCCATAACTGAA...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222266.2 |
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| CDS CCA 90 bp | TGCTCTAGACTCACAGCCTTTGATTTGGCTCTGTTCTGTGTAGGCTaGGACAAGGAAGGCCTCTCGGAAGAACCAGAAGATGTTGACCAA | + |
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Preference number: 5 (lower is better) Translates to: CSRLTAFDLALFCVG*DKEGLSEEPEDVDQ Trigger: TTGGTCAACATCTTCTGGTTCTTCCGAGAGGCCTTCCTTGTCCCAGCCTACACAGAACAGAGCCAAATCAAAGGCTGTGAGTCTAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS-3UTR CAA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGTTCAATTTCTCCTCATaGGACACTCGCTCCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRFNFSS*DTRSRF Trigger: GAACCTGGAGCGAGTGTCCAATGAGGAGAAATTGAA...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS-3UTR CAA 90 bp | ACGTGGGACATGAAAACAAGTCTTAGGAGTTTGAGAAGGGGCTCCCAGGACAGGGACATAGCCTTTGATTaGGCTCTGTTCTGTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: TWDMKTSLRSLRRGSQDRDIAFD*ALFCVG Trigger: GCCTACACAGAACAGAGCCAAATCAAAGGCTATGTC...CCTGTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGTTTTCATGTCCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAACAAGTCTTAGGAGTTaGAGAAGGGGCTCCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SKVRVLYWGMSAENVGHETSLRS*RRGSQD Trigger: GTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGT...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAATTCAATTTCTCCTCATaGGACACTCGCTCCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SKVRVLYWGMSAENVGHEFNFSS*DTRSRF Trigger: GAACCTGGAGCGAGTGTCCAATGAGGAGAAATTGAA...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | AAAACGGGAAACTTCCATTTGTCACACGTCTTGGTCCAGATAAATCCCAGGAAGACAAGTCTTAGGAGTTaGAGAAGGGGCTCCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: KTGNFHLSHVLVQINPRKTSLRS*RRGSQD Trigger: GTCCTGGGAGCCCCTTCTCAAACTCCTAAGACTTGT...CTTCCTGGGATTTATCTGGACCAAGACGTGTGACAAATGGAAGTTTCCCGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | CGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAAAAGAACCAGAAGATGTaGACCAACCAGAGAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: RKLGSFIGGCQQRTWDMKKNQKM*TNQRKG Trigger: GCCTTTTCTCTGGTTGGTCAACATCTTCTGGTTCTT...TTTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | TCGAAAGTTAGGGTCCTTTATTGGGGGATGTCAGCAGAGAACGTGGGACATGAAAAGAACCAGAAGATGTaGACCAACCAGAGAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SKVRVLYWGMSAENVGHEKNQKM*TNQRKG Trigger: GCCTTTTCTCTGGTTGGTCAACATCTTCTGGTTCTT...TTCATGTCCCACGTTCTCTGCTGACATCCCCCAATAAAGGACCCTAACTTTCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | CCTCTAAAAGATCCCAGGAAGTCAGTATCGAAAGTTAGGGTCCTTTATTGGGGGCATTTGTCACACGTCTaGGTCCAGATAAATCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PLKDPRKSVSKVRVLYWGHLSHV*VQINPR Trigger: CCTGGGATTTATCTGGACCAAGACGTGTGACAAATG...CCCCCAATAAAGGACCCTAACTTTCGATACTGACTTCCTGGGATCTTTTAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGCAGACAACACTTCCTTCAGAAAACGGGAAACTTCCATTTGTCACAGGCAAGACCCAAGCCTaGACCCTAAGTAACAGATGC | + |
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Preference number: 5 (lower is better) Translates to: LFLQTTLPSENGKLPFVTGKTQA*TLSNRC Trigger: GCATCTGTTACTTAGGGTCAAGGCTTGGGTCTTGCC...TGTGACAAATGGAAGTTTCCCGTTTTCTGAAGGAAGTGTTGTCTGCAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587708.7 |
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| CDS GCA 72 bp | TTTCTCCTCATTGGACACTCGCTCCAGGTTCATAGCTaGGCTGGGGCCGGGTCGTCCCAAGGGTCTGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: FLLIGHSLQVHS*AGAGSSQGSAG Trigger: CCCCGCAGACCCTTGGGACGACCCGGCCCCAGCGCAGCTATGAACCTGGAGCGAGTGTCCAATGAGGAGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000222266.2 ENST00000587708.7 ENST00000591949.1 |
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| CDS CAA 90 bp | CTGGGGCCGGGTCGTCCCAAGGGTCTGCGGGGCAAGACCCAAGCCTaGACCCTAAGTAACAGATGCAAGGATCACGAACAACCACGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LGPGRPKGLRGKTQA*TLSNRCKDHEQPRP Trigger: GGGGCGTGGTTGTTCGTGATCCTTGCATCTGTTACTTAGGGTCAAGGCTTGGGTCTTGCCCCGCAGACCCTTGGGACGACCCGGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587708.7 ENST00000591949.1 |
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| CDS CCA 72 bp | TTCCTCCGGCTGGGGTGCCTTAGCTACTTTCAGTTATaGACGTTTGCGCGAGACGCCCCAGGTTTCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: FLRLGCLSYFQL*TFARDAPGFPG Trigger: TCCAGGGAAACCTGGGGCGTCTCGCGCAAACGTCCATAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS GCA 72 bp | CGGGGCAAGACCCAAGCCTTGACCCTAAGTAACAGATaGAAGGATCACGAACAACCACGCCCCAGGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RGKTQALTLSNR*KDHEQPRPRRA Trigger: AGCTCTCCTGGGGCGTGGTTGTTCGTGATCCTTGCATCTGTTACTTAGGGTCAAGGCTTGGGTCTTGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587708.7 ENST00000591949.1 |
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| CDS CCA 72 bp | CAGACATCTGTCATGGGAAACAGAAGCTGGAAGGGTTaGCCTCCGGCTGCTCTCCAGACTTCCCTAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: QTSVMGNRSWKG*PPAALQTSLDQ Trigger: CTGGTCTAGGGAAGTCTGGAGAGCAGCCGGAGGCCAACCCTTCCAGCTTCTGTTTCCCATGACAGATGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS CCA 72 bp | CCAAGCCTTGACCCAGGAGAGCTCACTTCCTCCGGCTaGGGTGCCTTAGCTACTTTCAGTTATGGACGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PSLDPGELTSSG*GALATFSYGRL Trigger: CAAACGTCCATAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGTGAGCTCTCCTGGGTCAAGGCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222266.2 |
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| CDS CCA 72 bp | AACAACCACGCCCCAGGAGAGCTCACTTCCTCCGGCTaGGGTGCCTTAGCTACTTTCAGTTATGGACGTTTG | + |
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Preference number: 6 (lower is better) Translates to: NNHAPGELTSSG*GALATFSYGRL Trigger: CAAACGTCCATAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGTGAGCTCTCCTGGGGCGTGGTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS CAA 72 bp | GGTCGTCCCAAGGGTCTGCGGGGCAAGACCCAAGCCTaGACCCTAAGTAACAGATGCAAGGATCACGAACAA | + |
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Preference number: 6 (lower is better) Translates to: GRPKGLRGKTQA*TLSNRCKDHEQ Trigger: TTGTTCGTGATCCTTGCATCTGTTACTTAGGGTCAAGGCTTGGGTCTTGCCCCGCAGACCCTTGGGACGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587708.7 ENST00000591949.1 |
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| CDS CAA 72 bp | GGCTGGGGTGCCTTAGCTACTTTCAGTTATGGACGTTaGCGCGAGACGCCCCAGGTTTCCCTGGAGATTGTA | + |
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Preference number: 6 (lower is better) Translates to: GWGALATFSYGR*RETPQVSLEIV Trigger: TACAATCTCCAGGGAAACCTGGGGCGTCTCGCGCAAACGTCCATAACTGAAAGTAGCTAAGGCACCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS TCA 72 bp | GGTGAGCACTATCACCCAGAAGAGGAAGCCCACAGCTaGGCGCCAGACATAGCCTTTGATTTGGCTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GEHYHPEEEAHS*APDIAFDLALF Trigger: GAACAGAGCCAAATCAAAGGCTATGTCTGGCGCTCAGCTGTGGGCTTCCTCTTCTGGGTGATAGTGCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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| CDS CAA 72 bp | CTCCCTCCTCTGTGCTCTAGACTCACAGCCTTTGATTaGGCTCTGTTCTGTGTAGGCTGGGACAAGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LPPLCSRLTAFD*ALFCVGWDKEG Trigger: GCCTTCCTTGTCCCAGCCTACACAGAACAGAGCCAAATCAAAGGCTGTGAGTCTAGAGCACAGAGGAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS CAA 90 bp | ACTTCCTCCGGCTGGGGTGCCTTAGCTACTTTCAGTTATGGACGTTaGCGCGAGACGCCCCAGGTTTCCCTGGAGATTGTAGTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TSSGWGALATFSYGR*RETPQVSLEIVVFF Trigger: AAAGAAGACTACAATCTCCAGGGAAACCTGGGGCGTCTCGCGCAAACGTCCATAACTGAAAGTAGCTAAGGCACCCCAGCCGGAGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS CCA 72 bp | CTCACAGCCTTTGATTTGGCTCTGTTCTGTGTAGGCTaGGACAAGGAAGGCCTCTCGGAAGAACCAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LTAFDLALFCVG*DKEGLSEEPED Trigger: ATCTTCTGGTTCTTCCGAGAGGCCTTCCTTGTCCCAGCCTACACAGAACAGAGCCAAATCAAAGGCTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591949.1 |
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| CDS CCA 72 bp | GACATAGCCTTTGATTTGGCTCTGTTCTGTGTAGGCTaGGACAAGGAAGGCCTCTCGGAAGAACCAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: DIAFDLALFCVG*DKEGLSEEPED Trigger: ATCTTCTGGTTCTTCCGAGAGGCCTTCCTTGTCCCAGCCTACACAGAACAGAGCCAAATCAAAGGCTATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222266.2 ENST00000587708.7 |
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