RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSEN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000080815

Ensembl transcript IDs: ENST00000324501.10, ENST00000357710.8, ENST00000394157.7, ENST00000394164.5, ENST00000406768.1, ENST00000553447.6, ENST00000553599.5, ENST00000553719.5, ENST00000553855.5, ENST00000554131.5, ENST00000555254.5, ENST00000555386.5, ENST00000555867.1, ENST00000556011.5, ENST00000556066.1, ENST00000556533.5, ENST00000556864.5, ENST00000556951.5, ENST00000557037.5, ENST00000557293.5, ENST00000557356.5, ENST00000557511.5, ENST00000559361.5, ENST00000560005.6

Found 801 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTAACGGTAGTCCTGAGAGTTCGCAGTGTCAGTGAAATCGTCCTGTaGCCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCC +
Preference number: 1 (lower is better)
Translates to: VTVVLRVRSVSEIVL*PRVKLLMGHSNFRA
Trigger: GGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCACAGGACGATTTCACTGACACTGCGAACTCTCAGGACTACCGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR CCA 90 bp TGCCGGGAGTTACCCTGGGGTCGTCCATTAGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCGTTGTGCTCCTGCCGTTCTCTATTG +
Preference number: 1 (lower is better)
Translates to: CRELPWGRPLDNGSG*PRLRLSLCSCRSLL
Trigger: CAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR GCA 90 bp GGAAATCGTCCCTGCTACACAGACACACAGACCAACTGGCAATGCTaGCACCACATGTCAGGGCTCAGGGTGGACCCAGCACATCCACTA +
Preference number: 1 (lower is better)
Translates to: GNRPCYTDTQTNWQC*HHMSGLRVDPAHPL
Trigger: TAGTGGATGTGCTGGGTCCACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTGTAGCAGGGACGATTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CCA 90 bp TGCTTTCTGGGAAATCGTCCCTGCTACACAGACACACAGACCAACTaGCAATGCTGCCACCACATGTCAGGGCTCAGGGTGGACCCAGCA +
Preference number: 1 (lower is better)
Translates to: CFLGNRPCYTDTQTN*QCCHHMSGLRVDPA
Trigger: TGCTGGGTCCACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTGTAGCAGGGACGATTTCCCAGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CCA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAATGGCTCAGGGTGGCCAAGGCTCCGT +
Preference number: 1 (lower is better)
Translates to: SSSSSSCSTTCRELP*GRPLDNGSGWPRLR
Trigger: ACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGGACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR GCA 90 bp TGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTGGTTCTCCTTCTaGCACCAGGTTCTCCCACAGCTCACCAAGTTAAATATGGCTTTC +
Preference number: 1 (lower is better)
Translates to: CWRPLLFPLGSWFSF*HQVLPQLTKLNMAF
Trigger: GAAAGCCATATTTAACTTGGTGAGCTGTGGGAGAACCTGGTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 90 bp CCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTaGGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: PLEERTMQMITCRCL*AVSPMTALLVHSGQ
Trigger: CTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 90 bp GCCTTACTGGCTGTAGAAAAAGACTGCTTGTGTGGGAGAGAAGAATaGGGACAGAGGAGGCATCTGGGGCAAGTGAGCGTACAAGTATGT +
Preference number: 1 (lower is better)
Translates to: ALLAVEKDCLCGREE*GQRRHLGQVSVQVC
Trigger: ACATACTTGTACGCTCACTTGCCCCAGATGCCTCCTCTGTCCTCATTCTTCTCTCCCACACAAGCAGTCTTTTTCTACAGCCAGTAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR TCA 90 bp CTACTGCTGGTTTTGCCCGACTCTATAACCACCGCCTGTCCCGTGTaGGTGAAGGCACATCCTTATGGAAATTGCTACTGTTCTTTCCAG +
Preference number: 1 (lower is better)
Translates to: LLLVLPDSITTACPV*VKAHPYGNCYCSFQ
Trigger: CTGGAAAGAACAGTAGCAATTTCCATAAGGATGTGCCTTCACTCACACGGGACAGGCGGTGGTTATAGAGTCGGGCAAAACCAGCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CCA 90 bp ATCGTTTTCTATAGGCACCTCCTTCCAAAGTCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAA +
Preference number: 1 (lower is better)
Translates to: IVFYRHLLPKSNSAR*SGRLGRKLQKSSRE
Trigger: TTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGACTTTGGAAGGAGGTGCCTATAGAAAACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR GCA 90 bp CAAAGTCCAATAGTGCAAGGTGGTCAGGAAGACTTGGAAGGAAGCTaGAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGATGTGGACAC +
Preference number: 1 (lower is better)
Translates to: QSPIVQGGQEDLEGS*KSPAGNLDFVRCGH
Trigger: GTGTCCACATCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR GCA 90 bp CGTCCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTaGGATGAAGTATGTTCAAAATCGTTTTCTATAGGCACCTCCTTC +
Preference number: 1 (lower is better)
Translates to: RPSNLVVSAPRDTVH*DEVCSKSFSIGTSF
Trigger: GAAGGAGGTGCCTATAGAAAACGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR TCA 90 bp CTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATaGAGTATGTTCAAAATCGTTTTCTATAGGCACCTCCTTCCAAAG +
Preference number: 1 (lower is better)
Translates to: LKSGSFCTEGHSPLR*SMFKIVFYRHLLPK
Trigger: CTTTGGAAGGAGGTGCCTATAGAAAACGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR GCA 90 bp ACCCCAGCACCTCCAAGGACACCAAAAACAAGACAGTCCTGTACTTaGTACTATATGCAGCTGACTTTGAAACTGCCTAGTCTCAACAAT +
Preference number: 1 (lower is better)
Translates to: TPAPPRTPKTRQSCT*YYMQLTLKLPSLNN
Trigger: ATTGTTGAGACTAGGCAGTTTCAAAGTCAGCTGCATATAGTAGCAAGTACAGGACTGTCTTGTTTTTGGTGTCCTTGGAGGTGCTGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CCA 90 bp TTTTCTTCCAGGGTTAGATCACAAATGATCAAATATACAAAGCCTTaGGGGTTGGGATCAAAGGCTTCCCGCAGTCATCTAACCCTGGGA +
Preference number: 1 (lower is better)
Translates to: FSSRVRSQMIKYTKP*GLGSKASRSHLTLG
Trigger: TCCCAGGGTTAGATGACTGCGGGAAGCCTTTGATCCCAACCCCCAAGGCTTTGTATATTTGATCATTTGTGATCTAACCCTGGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR GCA 90 bp TTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTaGTGTGGAAGAAGGTCTGACAGCAGGGCTGACAGCACCGATTCA +
Preference number: 1 (lower is better)
Translates to: FYSSLILPSLGIHLI*CGRRSDSRADSTDS
Trigger: TGAATCGGTGCTGTCAGCCCTGCTGTCAGACCTTCTTCCACAGCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR TCA 90 bp ACAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATaGAGAGCTGAAACCTCTGTTTTTAATCTCTTGTGTTGTGGGAAT +
Preference number: 1 (lower is better)
Translates to: TALLVHSGQPFHNAL*RAETSVFNLLCCGN
Trigger: ATTCCCACAACACAAGAGATTAAAAACAGAGGTTTCAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR GCA 90 bp GTTCTCCCACAGCTCACCAAGTTAAATATGGCTTTCCCCAACTCTTaGTTTGTGTTGATACAACTAGTTCATAATTCATCAACCACCAGC +
Preference number: 1 (lower is better)
Translates to: VLPQLTKLNMAFPNS*FVLIQLVHNSSTTS
Trigger: GCTGGTGGTTGATGAATTATGAACTAGTTGTATCAACACAAAGCAAGAGTTGGGGAAAGCCATATTTAACTTGGTGAGCTGTGGGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR GCA 90 bp TCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTaGTGTAGCTGTGCTTTCTCAATGATAATACCCATGCTAGCACAT +
Preference number: 1 (lower is better)
Translates to: SLKNASNHKLLFRWL*CSCAFSMIIPMLAH
Trigger: ATGTGCTAGCATGGGTATTATCATTGAGAAAGCACAGCTACAGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 90 bp AAAGAGGTGAGAAGATCACAAGGATCACTTCTAGGCTCAAACTTATaGTTATATGATAGTTTCCAGCCCAAGGGCAAAACCAAATGTCCA +
Preference number: 1 (lower is better)
Translates to: KEVRRSQGSLLGSNL*LYDSFQPKGKTKCP
Trigger: TGGACATTTGGTTTTGCCCTTGGGCTGGAAACTATCATATAATCATAAGTTTGAGCCTAGAAGTGATCCTTGTGATCTTCTCACCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 90 bp AAATACACACACCCCACGTACCCTCTTCAGAGAAGAAATGTATCATaGAAGGTGCAACACATTTGGGATCCTTACACAAATAAATTACTC +
Preference number: 1 (lower is better)
Translates to: KYTHPTYPLQRRNVS*KVQHIWDPYTNKLL
Trigger: GAGTAATTTATTTGTGTAAGGATCCCAAATGTGTTGCACCTTTCATGATACATTTCTTCTCTGAAGAGGGTACGTGGGGTGTGTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR GCA 90 bp CACACCCCACGTACCCTCTTCAGAGAAGAAATGTATCATGAAAGGTaGAACACATTTGGGATCCTTACACAAATAAATTACTCTAGATTA +
Preference number: 1 (lower is better)
Translates to: HTPRTLFREEMYHER*NTFGILTQINYSRL
Trigger: TAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAATGTGTTGCACCTTTCATGATACATTTCTTCTCTGAAGAGGGTACGTGGGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CCA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCG +
Preference number: 2 (lower is better)
Translates to: SSSSSSCSTTCRELPWGRDNGSG*PRLRLS
Trigger: CGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC...ACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR-3UTR GCA 90 bp ATCATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACAGTCTCGTCTTGCTCCACCACCTaGCGGGAGTTACCCTGGGGT +
Preference number: 2 (lower is better)
Translates to: IMMAAFRIECRALWPTVSSCSTT*RELPWG
Trigger: ACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA...CGAGACTGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR-3UTR CCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCTATCCCCTTCGCTGCTaGAGGCCCCTTCTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAYPLRC*RPLLFP
Trigger: GGGAAAGAGAAGGGGCCTCCAGCAGCGAAGGGGATA...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR TCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCTGTGTTTTGCCTGACTaGGCTGCCCAGAGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPACVLPD*AAQSLN
Trigger: GTTCAGGCTCTGGGCAGCTCAGTCAGGCAAAACACA...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CAA 90 bp AAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCTCCTaGACCTCGTCCCTCAAATCTGGTAGTTTCTGCACCGAGGGACAC +
Preference number: 2 (lower is better)
Translates to: KLLMGHSNFRAYHIS*TSSLKSGSFCTEGH
Trigger: GTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR CAA 90 bp CTTGGCGCCATATTTCAATGTCAGCTCCTCATCTTCTTCCTCATCTaGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTCCATTAGA +
Preference number: 2 (lower is better)
Translates to: LGAIFQCQLLIFFLI*LHHLPGVTLGSSIR
Trigger: TCTAATGGACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGAGGAGCTGACATTGAAATATGGCGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR-3UTR TCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGACACGCGTCAAGCTGCTaGTGGGGCACAGCAACTTCC +
Preference number: 2 (lower is better)
Translates to: WPWEEMAITDGNECQCLRHASSC*WGTATS
Trigger: GGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTG...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp CACAGACACACAGACCAACTGGCAATGCTGCCACCACATGTCAGGGCTCAGGGTTCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: HRHTDQLAMLPPHVRAQGSNSAR*SGRLGR
Trigger: CCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGA...ACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR TCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGGCAGGTGAGGAGGTaGGGAGAAGGGCAGGTCAAA +
Preference number: 2 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLRQVRR*GEGQVK
Trigger: TTTGACCTGCCCTTCTCCTCACCTCCTCACCTGCCT...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTCTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTA +
Preference number: 2 (lower is better)
Translates to: SSSSSSCSTTCRELPWGRLSLCS*RSLLSL
Trigger: TAATGACAATAGAGAACGGCAGGAGCACAACGACAG...ACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR-3UTR CCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCGTGGTCAGGAAGACTTaGAAGGAAGCTGCAAAAGTC +
Preference number: 2 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAVVRKT*KEAAKV
Trigger: GACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCAC...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCACAGTCCACTGCGATaGAGTATGTTCAAAATCGTT +
Preference number: 2 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYHSPLR*SMFKIV
Trigger: AACGATTTTGAACATACTTCATCGCAGTGGACTGTG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAGACTTGGAAGGAAGCTaGAAAAGTCCAGCCGGGAAT +
Preference number: 2 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVDLEGS*KSPAGN
Trigger: ATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTC...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCCACAGTCCACTGCGATaGAGTATGTTCAAAATCGTT +
Preference number: 2 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAHSPLR*SMFKIV
Trigger: AACGATTTTGAACATACTTCATCGCAGTGGACTGTG...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR TCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAAGTTCGCAGTGTCAGTaGAATCGTCCTGTGACCACG +
Preference number: 2 (lower is better)
Translates to: WPWEEMAITDGNECQCLRSSQCQ*NRPVTT
Trigger: CGTGGTCACAGGACGATTTCACTGACACTGCGAACT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGGGCATCTGGGGCAAGTaGGCGTACAAGTATGTCTAC +
Preference number: 2 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLGIWGK*AYKYVY
Trigger: GTAGACATACTTGTACGCTCACTTGCCCCAGATGCC...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGCCTTTGTCCAGAGGTaGCCTGAGCCCACACAGGCT +
Preference number: 2 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLAFVQR*PEPTQA
Trigger: AGCCTGTGTGGGCTCAGGGCACCTCTGGACAAAGGC...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTTCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGSNSAR*SGRLGR
Trigger: CCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGA...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVSNSAR*SGRLGR
Trigger: CCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGTTTCCCCTTGGCAGTTaGTTCTCCTTCTGCCACCAG +
Preference number: 2 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLFPLGS*FSFCHQ
Trigger: CTGGTGGCAGAAGGAGAACCAACTGCCAAGGGGAAA...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR TCA 90 bp CACAGACACACAGACCAACTGGCAATGCTGCCACCACATGTCAGGGCTCAGGGTACGTGTAGTTTAAGATaGAGAGTTCCGTTTGGTTTA +
Preference number: 2 (lower is better)
Translates to: HRHTDQLAMLPPHVRAQGTCSLR*RVPFGL
Trigger: TAAACCAAACGGAACTCTTCATCTTAAACTACACGT...ACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAATAATGGGACCATCTaGTACCACGACAGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLNNGTI*YHDRAA
Trigger: GGCAGCTCTGTCGTGGTAGCAGATGGTCCCATTATT...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CAA 90 bp GTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTaGACTTTGTTAGATGTGGACACAGGAAAATCACCTTTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: VRKTWKEAAKVQPGI*TLLDVDTGKSPLSS
Trigger: GGAGGACAAAGGTGATTTTCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGCTGACGAGAATAACCTaGAACTCCTCCTTGACATCA +
Preference number: 2 (lower is better)
Translates to: QLCWYTLASHFTTHYEELLTRIT*NSSLTS
Trigger: TGATGTCAAGGAGGAGTTTCAGGTTATTCTCGTCAG...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAAAATCTGGTAGTTTCTaGACCGAGGGACACAGTCCA +
Preference number: 2 (lower is better)
Translates to: WPWEEMAITDGNECQCLRKSGSF*TEGHSP
Trigger: TGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR GCA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGCATTCCCCATTCTGCTaGTGGTGCCTGCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWHSPFC*WCLLFL
Trigger: GAGGAAGAGCAGGCACCAGCAGCAGAATGGGGAATG...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCCTGGTCATACTCTACTaGTGGTTTTGCCCGACTCTA +
Preference number: 2 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSLVILY*WFCPTL
Trigger: TAGAGTCGGGCAAAACCAGCAGTAGAGTATGACCAG...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAGTGGTCAGGAAGACTTaGAAGGAAGCTGCAAAAGTC +
Preference number: 2 (lower is better)
Translates to: WPWEEMAITDGNECQCLRVVRKT*KEAAKV
Trigger: GACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCAC...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCGGTTCAGACTGGCCTTaGGAAGAAATGGCAATCACA +
Preference number: 2 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSGSDWP*EEMAIT
Trigger: TGTGATTGCCATTTCTTCCCAAGGCCAGTCTGAACC...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR TCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGAGTTCGCAGTGTCAGTaGAATCGTCCTGTGACCACG +
Preference number: 2 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLSSQCQ*NRPVTT
Trigger: CGTGGTCACAGGACGATTTCACTGACACTGCGAACT...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATTGAATGTTCCACAGTaGGGAGGAAGAAAACTAAAA +
Preference number: 2 (lower is better)
Translates to: PASASEPGITHAPGFLFVLNVPQ*GGRKLK
Trigger: TTTTAGTTTTCTTCCTCCTCACTGTGGAACATTCAA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394157.7
3UTR-3UTR TCA 90 bp CACCTGTATTTATACAGAACCACCAGGAGGATAGTCATGACAACAATGACACTGCAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 2 (lower is better)
Translates to: HLYLYRTTRRIVMTTMTLQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...CAGTGTCATTGTTGTCATGACTATCCTCCTGGTGGTTCTGTATAAATACAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR-3UTR GCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCGGCATACATCTCATTTaGTGTGGAAGAAGGTCTGAC +
Preference number: 2 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSGIHLI*CGRRSD
Trigger: GTCAGACCTTCTTCCACAGCAAATGAGATGTATGCC...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp CACCTGTATTTATACAGAACCACCAGGAGGATAGTCATGACAACAATGACACTGGCATTCAGAATTGAGTaGAGGGCTCTCTGGCCCACA +
Preference number: 2 (lower is better)
Translates to: HLYLYRTTRRIVMTTMTLAFRIE*RALWPT
Trigger: TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGC...CAGTGTCATTGTTGTCATGACTATCCTCCTGGTGGTTCTGTATAAATACAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR-3UTR CCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGTTCCAAATTCAATGTTaGAAGGCAGGTGAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLFQIQC*KAGEEV
Trigger: CACCTCCTCACCTGCCTTCCAACATTGAATTTGGAA...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGACTTGGAAGGAAGCTaGAAAAGTCCAGCCGGGAAT +
Preference number: 2 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLDLEGS*KSPAGN
Trigger: ATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTC...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCCATTCCCCATTCTGCTaGTGGTGCCTGCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: QPFYSSLILPSLGIHLICHSPFC*WCLLFL
Trigger: GAGGAAGAGCAGGCACCAGCAGCAGAATGGGGAATG...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAGTTCGCAGTGTCAGTaGAATCGTCCTGTGACCACG +
Preference number: 2 (lower is better)
Translates to: EELPKAIYIFDLTQREGKSSQCQ*NRPVTT
Trigger: CGTGGTCACAGGACGATTTCACTGACACTGCGAACT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR GCA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCTCTGCTGCTGGTGCCTaGTCTTCCTCACAGTACCTC +
Preference number: 2 (lower is better)
Translates to: FGILTQINYSRLGIPQECSAAGA*SSSQYL
Trigger: GAGGTACTGTGAGGAAGAGCAGGCACCAGCAGCAGA...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACATTCCCCATTCTGCTaGTGGTGCCTGCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKHSPFC*WCLLFL
Trigger: GAGGAAGAGCAGGCACCAGCAGCAGAATGGGGAATG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR GCA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGATGTATCATGAAAGGTaGAACACATTTGGGATCCTT +
Preference number: 2 (lower is better)
Translates to: QLCWYTLASHFTTHYEELMYHER*NTFGIL
Trigger: AAGGATCCCAAATGTGTTGCACCTTTCATGATACAT...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTAAGAAGAAACATCCATaGGATTCTAACCGCAAATAT +
Preference number: 2 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGKKKHP*DSNRKY
Trigger: ATATTTGCGGTTAGAATCCCATGGATGTTTCTTCTT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAAGAAGAAACATCCATaGGATTCTAACCGCAAATAT +
Preference number: 2 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILKKKHP*DSNRKY
Trigger: ATATTTGCGGTTAGAATCCCATGGATGTTTCTTCTT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAAATCAAAGGGAAGCTaGAACCCCTGCCCACCTCTC +
Preference number: 2 (lower is better)
Translates to: EELPKAIYIFDLTQREGKKSKGS*NPCPPL
Trigger: GAGAGGTGGGCAGGGGTTCCAGCTTCCCTTTGATTT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATTACTCCCCTTTCCTCTaGGTCTTCACCAGCGAGGAT +
Preference number: 2 (lower is better)
Translates to: KRLYKIICGKVENKPKGDYSPFL*VFTSED
Trigger: ATCCTCGCTGGTGAAGACCCAGAGGAAAGGGGAGTA...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555386.5
3UTR-3UTR TCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTGGCAATCTACATATTTaGCTTGACTCAAAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RDPSRMLPITNCYSGGFAGNLHI*LDSKRG
Trigger: CCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCC...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCAGTTGGTTCTCCTTCTaGCACCAGGTTCTCCCACAG +
Preference number: 2 (lower is better)
Translates to: FGILTQINYSRLGIPQECSWFSF*HQVLPQ
Trigger: CTGTGGGAGAACCTGGTGGCAGAAGGAGAACCAACT...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAATGAAGAGTTCCGTTTaGTTTAAACCACTTCACCTA +
Preference number: 2 (lower is better)
Translates to: WPWEEMAITDGNECQCLRMKSSV*FKPLHL
Trigger: TAGGTGAAGTGGTTTAAACCAAACGGAACTCTTCAT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAAAATCAAAGGGAAGCTaGAACCCCTGCCCACCTCTC +
Preference number: 2 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKKSKGS*NPCPPL
Trigger: GAGAGGTGGGCAGGGGTTCCAGCTTCCCTTTGATTT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCTCAACCACCAGCTTTTaGCTATTTGTTCAAATTCTG +
Preference number: 2 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSSTTSF*LFVQIL
Trigger: CAGAATTTGAACAAATAGCCAAAAGCTGGTGGTTGA...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CAA 90 bp AAAGTGCTTCAACAGCCATTTTACTCTTCTTTAATTCTACCGTCTTaGGGCATACATCTCATTTGCTGTGGAAGAAGGTCTGACAGCAGG +
Preference number: 2 (lower is better)
Translates to: KVLQQPFYSSLILPS*GIHLICCGRRSDSR
Trigger: CCTGCTGTCAGACCTTCTTCCACAGCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTGTTGAAGCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGACTTGGAAGGAAGCTaGAAAAGTCCAGCCGGGAAT +
Preference number: 2 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKDLEGS*KSPAGN
Trigger: ATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR GCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGGTAATGAGTGTCAGTaGTTGAGAAGAAGAATTGCC +
Preference number: 2 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLGNECQ*LRRRIA
Trigger: GGCAATTCTTCTTCTCAAGCACTGACACTCATTACC...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCCTACCACGACAGAGCTaGCTTACTGGCTGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: QPFYSSLILPSLGIHLICLPRQS*LTGCRK
Trigger: TTTTCTACAGCCAGTAAGGCAGCTCTGTCGTGGTAG...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: EELPKAIYIFDLTQREGKSNSAR*SGRLGR
Trigger: CCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCCCTATCATATCTCCTTaGCCTCGTCCCTCAAATCTG +
Preference number: 2 (lower is better)
Translates to: FGILTQINYSRLGIPQECPIISP*PRPSNL
Trigger: CAGATTTGAGGGACGAGGTCAAGGAGATATGATAGG...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGCTTTCCCCAACTCTTaGTTTGTGTTGATACAACTA +
Preference number: 2 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLAFPNS*FVLIQL
Trigger: TAGTTGTATCAACACAAAGCAAGAGTTGGGGAAAGC...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR GCA 90 bp CACCTGTATTTATACAGAACCACCAGGAGGATAGTCATGACAACAATGACACTGAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 2 (lower is better)
Translates to: HLYLYRTTRRIVMTTMTLKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...CAGTGTCATTGTTGTCATGACTATCCTCCTGGTGGTTCTGTATAAATACAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAAAGAAGAAACATCCATaGGATTCTAACCGCAAATAT +
Preference number: 2 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRKKKHP*DSNRKY
Trigger: ATATTTGCGGTTAGAATCCCATGGATGTTTCTTCTT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACACAGTCCACTGCGATaGAGTATGTTCAAAATCGTT +
Preference number: 2 (lower is better)
Translates to: EELPKAIYIFDLTQREGKHSPLR*SMFKIV
Trigger: AACGATTTTGAACATACTTCATCGCAGTGGACTGTG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCCACAGTCCACTGCGATaGAGTATGTTCAAAATCGTT +
Preference number: 2 (lower is better)
Translates to: QPFYSSLILPSLGIHLICHSPLR*SMFKIV
Trigger: AACGATTTTGAACATACTTCATCGCAGTGGACTGTG...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCATGAGTGTCAGTGCTTaGGAAGAAGAATTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: QPFYSSLILPSLGIHLICMSVSA*EEELPK
Trigger: CTTTGGCAATTCTTCTTCTCAAGCACTGACACTCAT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGGTAATGAGTGTCAGTaGTTGAGAAGAAGAATTGCC +
Preference number: 2 (lower is better)
Translates to: QPFYSSLILPSLGIHLICGNECQ*LRRRIA
Trigger: GGCAATTCTTCTTCTCAAGCACTGACACTCATTACC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAATGAGTGTCAGTGCTTaGGAAGAAGAATTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKMSVSA*EEELPK
Trigger: CTTTGGCAATTCTTCTTCTCAAGCACTGACACTCAT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCAAATTGCTATTCAGGTaGCTTTGCTGTAGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: FGILTQINYSRLGIPQECKLLFR*LCCSCA
Trigger: AGCACAGCTACAGCAAAGCCACCTGAATAGCAATTT...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CCA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATACAAACCAATTAATATaGCTACGAAACAGGCTATGG +
Preference number: 2 (lower is better)
Translates to: LYKIICGKVENKPKGDGDTNQLI*LRNRLW
Trigger: CCATAGCCTGTTTCGTAGCCATATTAATTGGTTTGT...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
3UTR-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCACGTGTAGTTTAAGATaGAGAGTTCCGTTTGGTTTA +
Preference number: 2 (lower is better)
Translates to: QPFYSSLILPSLGIHLICTCSLR*RVPFGL
Trigger: TAAACCAAACGGAACTCTTCATCTTAAACTACACGT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTCTACATATTTGACTTaGCTCAAAGAGAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: QPFYSSLILPSLGIHLICSTYLT*LKERGK
Trigger: TTTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAATGAAGAGTTCCGTTTaGTTTAAACCACTTCACCTA +
Preference number: 2 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKMKSSV*FKPLHL
Trigger: TAGGTGAAGTGGTTTAAACCAAACGGAACTCTTCAT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CCA 90 bp AATTACTCTAGATTAGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTAGAGGGAATGAATCTTaGAAGAAGGGATTTCATGGA +
Preference number: 2 (lower is better)
Translates to: NYSRLGIPQECFQSQIAIRGNES*KKGFHG
Trigger: TCCATGAAATCCCTTCTTCCAAGATTCATTCCCTCT...AATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCTAATCTAGAGTAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CCA 72 bp CGCTGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTaGTTCTCCTTCTGCCACCAGGTTCTCCCACAGCTC +
Preference number: 3 (lower is better)
Translates to: RCWRPLLFPLGS*FSFCHQVLPQL
Trigger: GAGCTGTGGGAGAACCTGGTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR GCA 72 bp CCCTGCTACACAGACACACAGACCAACTGGCAATGCTaGCACCACATGTCAGGGCTCAGGGTGGACCCAGCA +
Preference number: 3 (lower is better)
Translates to: PCYTDTQTNWQC*HHMSGLRVDPA
Trigger: TGCTGGGTCCACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTGTAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CAA 90 bp TCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTCCAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 3 (lower is better)
Translates to: SSSSSCSTTCRELPWGRPRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...TGGACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR CCA 72 bp TTACCCTGGGGTCGTCCATTAGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCGTTGTGCTCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: LPWGRPLDNGSG*PRLRLSLCSCR
Trigger: ACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGGACGACCCCAGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR CCA 72 bp TCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAATGGCTCAGGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: SSSCSTTCRELP*GRPLDNGSGWP
Trigger: TGGCCACCCTGAGCCATTATCTAATGGACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR TCA 72 bp GTCCTGAGAGTTCGCAGTGTCAGTGAAATCGTCCTGTaGCCACGCGTCAAGCTGCTGATGGGGCACAGCAAC +
Preference number: 3 (lower is better)
Translates to: VLRVRSVSEIVL*PRVKLLMGHSN
Trigger: GTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCACAGGACGATTTCACTGACACTGCGAACTCTCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR TCA 72 bp GCAGGGCTCTCTGGCCCACAGTCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCTGCCCATCCTTCCGGG +
Preference number: 3 (lower is better)
Translates to: AGLSGPQSRYLL*MGYRLAAHPSG
Trigger: CCCGGAAGGATGGGCAGCTAATCTATACCCCATTCACAGAAGATACCGAGACTGTGGGCCAGAGAGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR GCA 72 bp CTCCCCTTTCCTCTGGGTCTTCACCAGCGAGGATACTaGTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAG +
Preference number: 3 (lower is better)
Translates to: LPFPLGLHQRGY*WKVPGQQLVTQ
Trigger: CTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGGTGAAGACCCAGAGGAAAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
3UTR CCA 72 bp GGAAATCGTCCCTGCTACACAGACACACAGACCAACTaGCAATGCTGCCACCACATGTCAGGGCTCAGGGTG +
Preference number: 3 (lower is better)
Translates to: GNRPCYTDTQTN*QCCHHMSGLRV
Trigger: CACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTGTAGCAGGGACGATTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 72 bp AGGCACCCTGCTGCCCAAGGCTGTGGGAGACAGCTTTaGTGTTCAAGAAAGGGGTTCATTTCAGCACCAGGG +
Preference number: 3 (lower is better)
Translates to: RHPAAQGCGRQL*CSRKGFISAPG
Trigger: CCCTGGTGCTGAAATGAACCCCTTTCTTGAACATCAAAGCTGTCTCCCACAGCCTTGGGCAGCAGGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGGTGGTCAGGAAGACTaGGAAGGAAGCTGCAAAAGT +
Preference number: 3 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYGGQED*EGSCKS
Trigger: ACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR TCA 72 bp TGGGGCACAGCAACTTCCGGGCCTATCATATCTCCTTaGCCTCGTCCCTCAAATCTGGTAGTTTCTGCACCG +
Preference number: 3 (lower is better)
Translates to: WGTATSGPIISP*PRPSNLVVSAP
Trigger: CGGTGCAGAAACTACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR TCA 72 bp TCAGTGAAATCGTCCTGTGACCACGCGTCAAGCTGCTaGTGGGGCACAGCAACTTCCGGGCCTATCATATCT +
Preference number: 3 (lower is better)
Translates to: SVKSSCDHASSC*WGTATSGPIIS
Trigger: AGATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCACAGGACGATTTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR TCA 72 bp CTTGGTAACGGTAGTCCTGAGAGTTCGCAGTGTCAGTaGAATCGTCCTGTGACCACGCGTCAAGCTGCTGAT +
Preference number: 3 (lower is better)
Translates to: LGNGSPESSQCQ*NRPVTTRQAAD
Trigger: ATCAGCAGCTTGACGCGTGGTCACAGGACGATTTCACTGACACTGCGAACTCTCAGGACTACCGTTACCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp CGCTGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTGGTTCTCCTTCTGCCACTTAATTCTACCGTCTTaGGGCATACATCTCATTTGC +
Preference number: 3 (lower is better)
Translates to: RCWRPLLFPLGSWFSFCHLILPS*GIHLIC
Trigger: GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAA...GTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CAA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAGGTGGTCAGGAAGACTaGGAAGGAAGCTGCAAAAGT +
Preference number: 3 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVGGQED*EGSCKS
Trigger: ACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACC...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCCCGATGACAGCTTaGTTGGTACACTCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLSPMTA*LVHSGQ
Trigger: CTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCT...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CAA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACCGGGAATCTTGACTTaGTTAGATGTGGACACAGGA +
Preference number: 3 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVPGILT*LDVDTG
Trigger: TCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTCCGGGAATCTTGACTTaGTTAGATGTGGACACAGGA +
Preference number: 3 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGPGILT*LDVDTG
Trigger: TCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGG...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGGGTGGTCAGGAAGACTaGGAAGGAAGCTGCAAAAGT +
Preference number: 3 (lower is better)
Translates to: QLCWYTLASHFTTHYEELGGQED*EGSCKS
Trigger: ACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACC...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 72 bp GTTTTGCCCGACTCTATAACCACCGCCTGTCCCGTGTaGGTGAAGGCACATCCTTATGGAAATTGCTACTGT +
Preference number: 3 (lower is better)
Translates to: VLPDSITTACPV*VKAHPYGNCYC
Trigger: ACAGTAGCAATTTCCATAAGGATGTGCCTTCACTCACACGGGACAGGCGGTGGTTATAGAGTCGGGCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 72 bp GAGAGGACTATGCAGATGATCACATGCAGATGTCTCTaGGCTGTGAGCCCGATGACAGCTTTGTTGGTACAC +
Preference number: 3 (lower is better)
Translates to: ERTMQMITCRCL*AVSPMTALLVH
Trigger: GTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 72 bp AACAATGACACTGATCATGATGGCAGCATTCAGAATTaGGTGCAGGGCTCTCTGGCCCACAGTCTCGGTATC +
Preference number: 3 (lower is better)
Translates to: NNDTDHDGSIQN*VQGSLAHSLGI
Trigger: GATACCGAGACTGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGATCAGTGTCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGGTGGTCAGGAAGACTaGGAAGGAAGCTGCAAAAGT +
Preference number: 3 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSGGQED*EGSCKS
Trigger: ACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGTCACACAAAGGTACATaGAGAGGAAAGGTAACGCGG +
Preference number: 3 (lower is better)
Translates to: QLCWYTLASHFTTHYEELSHKGT*RGKVTR
Trigger: CCGCGTTACCTTTCCTCTCAATGTACCTTTGTGTGA...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CAA 90 bp ACACTGATCATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACAAGCATGATCACATGCTaGGCGCCATATTTCAATGTC +
Preference number: 3 (lower is better)
Translates to: TLIMMAAFRIECRALWPTSMITC*APYFNV
Trigger: GACATTGAAATATGGCGCCAAGCATGTGATCATGCT...TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGATCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
3UTR CCA 72 bp TATAGGCACCTCCTTCCAAAGTCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCC +
Preference number: 3 (lower is better)
Translates to: YRHLLPKSNSAR*SGRLGRKLQKS
Trigger: GGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGACTTTGGAAGGAGGTGCCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGACCGGGAATCTTGACTTaGTTAGATGTGGACACAGGA +
Preference number: 3 (lower is better)
Translates to: WPWEEMAITDGNECQCLRPGILT*LDVDTG
Trigger: TCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGG...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR TCA 72 bp GGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATaGAGTATGTTCAAAATCGTTTTCTATAGGCACCTC +
Preference number: 3 (lower is better)
Translates to: GSFCTEGHSPLR*SMFKIVFYRHL
Trigger: GAGGTGCCTATAGAAAACGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR GCA 72 bp ATAGTGCAAGGTGGTCAGGAAGACTTGGAAGGAAGCTaGAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGA +
Preference number: 3 (lower is better)
Translates to: IVQGGQEDLEGS*KSPAGNLDFVR
Trigger: TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTTGCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR GCA 72 bp TCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTaGTGTGGAAGAAGGTCTGACAGCAGGGCTGACAGC +
Preference number: 3 (lower is better)
Translates to: SLILPSLGIHLI*CGRRSDSRADS
Trigger: GCTGTCAGCCCTGCTGTCAGACCTTCTTCCACAGCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGTCCAGCCGGGAATCTaGACTTTGTTAGATGTGGAC +
Preference number: 3 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLVQPGI*TLLDVD
Trigger: GTCCACATCTAACAAAGTCAAGATTCCCGGCTGGAC...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CCA 72 bp AGGGTTAGATCACAAATGATCAAATATACAAAGCCTTaGGGGTTGGGATCAAAGGCTTCCCGCAGTCATCTA +
Preference number: 3 (lower is better)
Translates to: RVRSQMIKYTKP*GLGSKASRSHL
Trigger: TAGATGACTGCGGGAAGCCTTTGATCCCAACCCCCAAGGCTTTGTATATTTGATCATTTGTGATCTAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 72 bp CACCCCACGTACCCTCTTCAGAGAAGAAATGTATCATaGAAGGTGCAACACATTTGGGATCCTTACACAAAT +
Preference number: 3 (lower is better)
Translates to: HPTYPLQRRNVS*KVQHIWDPYTN
Trigger: ATTTGTGTAAGGATCCCAAATGTGTTGCACCTTTCATGATACATTTCTTCTCTGAAGAGGGTACGTGGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CCA 72 bp AGGAAAGATAGGTTCTCTGTACACTGTCTAACAATGTaGCTGAGATGTGGCTCAAACTTGGAGAAAGAGACA +
Preference number: 3 (lower is better)
Translates to: RKDRFSVHCLTM*LRCGSNLEKET
Trigger: TGTCTCTTTCTCCAAGTTTGAGCCACATCTCAGCCACATTGTTAGACAGTGTACAGAGAACCTATCTTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGTCCAGCCGGGAATCTaGACTTTGTTAGATGTGGAC +
Preference number: 3 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKVQPGI*TLLDVD
Trigger: GTCCACATCTAACAAAGTCAAGATTCCCGGCTGGAC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAACTTCACCTAACCTCTaGGTAACGGTAGTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: EELPKAIYIFDLTQREGKTSPNL*VTVVLR
Trigger: TCTCAGGACTACCGTTACCAAGAGGTTAGGTGAAGT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCACTTCACCTAACCTCTaGGTAACGGTAGTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: QPFYSSLILPSLGIHLICTSPNL*VTVVLR
Trigger: TCTCAGGACTACCGTTACCAAGAGGTTAGGTGAAGT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp AATTACTCTAGATTAGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCCCTTCTCTTTCCCCTaGGCAGTTGGTTCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: NYSRLGIPQECFQSQIAIPFSFP*AVGSPS
Trigger: AGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGG...AATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCTAATCTAGAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CAA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGATCAACCACCAGCTTTaGGCTATTTGTTCAAATTCT +
Preference number: 3 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLINHQL*AICSNS
Trigger: AGAATTTGAACAAATAGCCAAAAGCTGGTGGTTGAT...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR TCA 72 bp AGAAGATCACAAGGATCACTTCTAGGCTCAAACTTATaGTTATATGATAGTTTCCAGCCCAAGGGCAAAACC +
Preference number: 3 (lower is better)
Translates to: RRSQGSLLGSNL*LYDSFQPKGKT
Trigger: GGTTTTGCCCTTGGGCTGGAAACTATCATATAATCATAAGTTTGAGCCTAGAAGTGATCCTTGTGATCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CCA 72 bp CTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTaGCTTTGCTGTAGCTGTGCTTTCTCAATGATAATA +
Preference number: 3 (lower is better)
Translates to: LKNASNHKLLFR*LCCSCAFSMII
Trigger: TATTATCATTGAGAAAGCACAGCTACAGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR-3UTR CAA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCATCTACATATTTGACTaGACTCAAAGAGAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: QPFYSSLILPSLGIHLICIYIFD*TQREGK
Trigger: TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGAT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR-3UTR CAA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCATCTACATATTTGACTaGACTCAAAGAGAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: FGILTQINYSRLGIPQECIYIFD*TQREGK
Trigger: TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGAT...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CGCTGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTGGTTCTCCTTCTGCCACGAGTGCAGGGCTCTCTaGCCCACAGTCTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: RCWRPLLFPLGSWFSFCHECRAL*PTVSVS
Trigger: AGATACCGAGACTGTGGGCCAGAGAGCCCTGCACTC...GTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCACGCGTCAAGCTGCTaGTGGGGCACAGCAACTTCC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYHASSC*WGTATS
Trigger: GGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACAGGGTGGCAGCCCCTaGCCTCTCCTCTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVQGGSP*PLLLAP
Trigger: GGGTGCCAAGAGGAGAGGGCAGGGGCTGCCACCCTG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp CTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTGCTCCTGCCGTTCTCTATTGTCGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LRVAKAPSVVVLLPFSIVDNGSG*PRLRLS
Trigger: CGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC...GACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CCA 90 bp CTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTGCTCCTGCCGTTCTCTATTGTCGAGTGCAGGGCTCTCTaGCCCACAGTCTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: LRVAKAPSVVVLLPFSIVECRAL*PTVSVS
Trigger: AGATACCGAGACTGTGGGCCAGAGAGCCCTGCACTC...GACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR TCA 90 bp CGCTGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTGGTTCTCCTTCTGCCACGGCATCTGGGGCAAGTaGGCGTACAAGTATGTCTAC +
Preference number: 4 (lower is better)
Translates to: RCWRPLLFPLGSWFSFCHGIWGK*AYKYVY
Trigger: GTAGACATACTTGTACGCTCACTTGCCCCAGATGCC...GTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATAGGCAGGTGAGGAGGTaGGGAGAAGGGCAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYRQVRR*GEGQVK
Trigger: TTTGACCTGCCCTTCTCCTCACCTCCTCACCTGCCT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAAGGCACCCTTTGGCATaGACAGCCTGGGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVRHPLA*TAWVPW
Trigger: CCATGGCACCCAGGCTGTTCATGCCAAAGGGTGCCT...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGAGTGCAGGGCTCTCTaGCCCACAGTCTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYECRAL*PTVSVS
Trigger: AGATACCGAGACTGTGGGCCAGAGAGCCCTGCACTC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTAGTGGAGGGTCAGGGTaGCAGCCCCTGCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGSGGSG*QPLPSP
Trigger: AGGAGAGGGCAGGGGCTGCCACCCTGACCCTCCACT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR TCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGGCAGCATTCAGAATTaGGTGCAGGGCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVGSIQN*VQGSLA
Trigger: GGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCC...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAAGGCACCCTTTGGCATaGACAGCCTGGGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERRHPLA*TAWVPW
Trigger: CCATGGCACCCAGGCTGTTCATGCCAAAGGGTGCCT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATCTTGCTCCACCACCTaGCGGGAGTTACCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVSCSTT*RELPWG
Trigger: ACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGATCTTGCTCCACCACCTaGCGGGAGTTACCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERSCSTT*RELPWG
Trigger: ACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp ATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACAGTCTCGGTATCTTGCTCCACCACCTaGCGGGAGTTACCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: MMAAFRIECRALWPTVSVSCSTT*RELPWG
Trigger: ACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA...TACCGAGACTGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTCTTCTTCCTCATCTTaGTCCACCACCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSSSSS*STTCRE
Trigger: CTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTTCTTCTTCCTCATCTTaGTCCACCACCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSSSSCSTTCRELPWGRSSSSS*STTCRE
Trigger: CTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGA...ACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCCACGACCACCACCATaGAGAGAGTCACAGGGACAA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYPRPPP*RESQGQ
Trigger: TTGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTCTGCTGCTGGTGCCTaGTCTTCCTCACAGTACCTC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSAAGA*SSSQYL
Trigger: GAGGTACTGTGAGGAAGAGCAGGCACCAGCAGCAGA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVDNGSG*PRLRLS
Trigger: CGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGTGCAGGGCTCTCTaGCCCACAGTCTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVECRAL*PTVSVS
Trigger: AGATACCGAGACTGTGGGCCAGAGAGCCCTGCACTC...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAATGCTCGTCGCCCCTaGACAAGGACACACCCGGGG +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVNARRP*TRTHPG
Trigger: CCCCGGGTGTGTCCTTGTCCAGGGGCGACGAGCATT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTCAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: SSSSSSCSTTCRELPWGRQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...ACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGGCAGCATTCAGAATTaGGTGCAGGGCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVGSIQN*VQGSLA
Trigger: GGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR TCA 90 bp ATCATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACAGTCTCGGGCAGCATTCAGAATTaGGTGCAGGGCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: IMMAAFRIECRALWPTVSGSIQN*VQGSLA
Trigger: GGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCC...CGAGACTGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR TCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGACTGGACAGCAGCTCGTaGCTCAGGTGTAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERLDSSS*LRCRAM
Trigger: CATCGCTCTACACCTGAGTCACGAGCTGCTGTCCAG...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACACGCGTCAAGCTGCTaGTGGGGCACAGCAACTTCC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVHASSC*WGTATS
Trigger: GGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTCACGCGTCAAGCTGCTaGTGGGGCACAGCAACTTCC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGHASSC*WGTATS
Trigger: GGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTG...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGTTTTGTTTCCGATGTaGAACCGCGGACCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVVLFPM*NRGPRS
Trigger: GCTCCGGGGTCCGCGGTTTCACATCGGAAACAAAAC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATCCTGCCTCAGCCTCTaGGCCTGGCATTACACATGC +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVSCLSL*AWHYTC
Trigger: GCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGGA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTG +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYLRLSL*SCRSLL
Trigger: CAATAGAGAACGGCAGGAGCACAACGACAGACGGAG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTTCTTGCTCCACCACCTaGCGGGAGTTACCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGSCSTT*RELPWG
Trigger: ACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGTCTTGCTCCACCACCTaGCGGGAGTTACCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILSCSTT*RELPWG
Trigger: ACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCCCACGACCACCACCATaGAGAGAGTCACAGGGACAA +
Preference number: 4 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAPRPPP*RESQGQ
Trigger: TTGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGG...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTGCATTCAGAATTGAGTaGAGGGCTCTCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: SSSSSSCSTTCRELPWGRAFRIE*RALWPT
Trigger: TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGC...ACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVDNGSG*PRLRLS
Trigger: CGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERDNGSG*PRLRLS
Trigger: CGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGAGTGCAGGGCTCTCTaGCCCACAGTCTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVECRAL*PTVSVS
Trigger: AGATACCGAGACTGTGGGCCAGAGAGCCCTGCACTC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCTGCTGGAAAGTTCCTaGACAGCAGCTCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYLLESS*TAARDS
Trigger: TGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCAGCGAGGATACTGCTaGAAAGTTCCTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYQRGYC*KVPGQQ
Trigger: CTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR CAA 72 bp GAGGCACCCTGCTGCCCAAGGCTGTGGGAGACAGCTTaGATGTTCAAGAAAGGGGTTCATTTCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: EAPCCPRLWETA*MFKKGVHFSTR
Trigger: CCTGGTGCTGAAATGAACCCCTTTCTTGAACATCAAAGCTGTCTCCCACAGCCTTGGGCAGCAGGGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGGCAGCATTCAGAATTaGGTGCAGGGCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGGSIQN*VQGSLA
Trigger: GGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTTGGATACTCTCCTTTaGGCTTCCGGGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYLDTLL*ASGSPS
Trigger: AGAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCTTCCCATTCCTCACTaGACCCGCCATCATCATTCT +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYLPIPH*TRHHHS
Trigger: AGAATGATGATGGCGGGTTCAGTGAGGAATGGGAAG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTCTGGACAGCAGCTCGTaGCTCAGGTGTAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGLDSSS*LRCRAM
Trigger: CATCGCTCTACACCTGAGTCACGAGCTGCTGTCCAG...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCAGTTCGCAGTGTCAGTaGAATCGTCCTGTGACCACG +
Preference number: 4 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPASSQCQ*NRPVTT
Trigger: CGTGGTCACAGGACGATTTCACTGACACTGCGAACT...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTAAGGCACCTGCGCCCTaGGACGTCTTCGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGKAPAP*DVFEQT
Trigger: TGTTTGCTCGAAGACGTCTCAGGGCGCAGGTGCCTT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATCTTCTTCCTCATCTTaGTCCACCACCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVSSSSS*STTCRE
Trigger: CTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGATCTTCTTCCTCATCTTaGTCCACCACCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERSSSSS*STTCRE
Trigger: CTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGA...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTACCACGACCACCACCATaGAGAGAGTCACAGGGACAA +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVPRPPP*RESQGQ
Trigger: TTGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGG...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGACCACGACCACCACCATaGAGAGAGTCACAGGGACAA +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERPRPPP*RESQGQ
Trigger: TTGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGG...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp CGCTGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTGGTTCTCCTTCTGCCACATAATGAGATATGCCTaGTGGAGTCGAAGTGGACCT +
Preference number: 4 (lower is better)
Translates to: RCWRPLLFPLGSWFSFCHIMRYA*WSRSGP
Trigger: AGGTCCACTTCGACTCCAGCAGGCATATCTCATTAT...GTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCTCGAACAAGAGGCGTaGGGACTTCGCCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILLEQEA*GLRPEC
Trigger: GCATTCTGGGCGAAGTCCGCACGCCTCTTGTTCGAG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGGTCACTGGACATGCATaGCTCGAGACAGTCCCGACC +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILVTGHA*LETVPT
Trigger: GGTCGGGACTGTCTCGAGGCATGCATGTCCAGTGAC...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR GCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACATGAACAGCCTGGGTaGCATGGGAGCTATAGACAG +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVHEQPG*HGSYRQ
Trigger: CTGTCTATAGCTCCCATGGCACCCAGGCTGTTCATG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVDNGSG*PRLRLS
Trigger: CGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTTGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAAT +
Preference number: 4 (lower is better)
Translates to: SSSSSSCSTTCRELPWGRCRELP*GRPLDN
Trigger: ATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA...ACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAGAGTGCAGGGCTCTCTaGCCCACAGTCTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVECRAL*PTVSVS
Trigger: AGATACCGAGACTGTGGGCCAGAGAGCCCTGCACTC...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCTGCTGGAGTCGAAGTaGACCTTTCCAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYLLESK*TFPVNG
Trigger: TCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACTGCTGGAAAGTTCCTaGACAGCAGCTCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVLLESS*TAARDS
Trigger: TGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACAGCGAGGATACTGCTaGAAAGTTCCTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVQRGYC*KVPGQQ
Trigger: CTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATACTCCCCTTTCCTCTaGGTCTTCACCAGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVYSPFL*VFTSED
Trigger: ATCCTCGCTGGTGAAGACCCAGAGGAAAGGGGAGTA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATACCTCAGGTTCAGACTaGCCTTGGGAAGAAATGGCA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYTSGSD*PWEEMA
Trigger: TGCCATTTCTTCCCAAGGCCAGTCTGAACCTGAGGT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CGCTGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTGGTTCTCCTTCTGCCACTTAAGCAGATTGGCTTaGCTGGTCATACTCTACTGC +
Preference number: 4 (lower is better)
Translates to: RCWRPLLFPLGSWFSFCHLSRLA*LVILYC
Trigger: GCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAA...GTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCGACACACAGACCAACTaGCAATGCTGCCACCACATG +
Preference number: 4 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPADTQTN*QCCHHM
Trigger: CATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTC...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTACTGCTTGTGAACTCCTaGGCCCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVLLVNS*AQVILL
Trigger: CAGGAGGATCACTTGGGCCCAGGAGTTCACAAGCAG...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
3UTR CAA 72 bp CAGGCACCTCCACTGCCCAGTTCACACAAAGGTACATaGAGAGGAAAGGTAACGCGGGCAGAGACCACAAAG +
Preference number: 4 (lower is better)
Translates to: QAPPLPSSHKGT*RGKVTRAETTK
Trigger: CTTTGTGGTCTCTGCCCGCGTTACCTTTCCTCTCAATGTACCTTTGTGTGAACTGGGCAGTGGAGGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTACAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR TCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGACAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATTGGATACTCTCCTTTaGGCTTCCGGGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVLDTLL*ASGSPS
Trigger: AGAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACTTCCCATTCCTCACTaGACCCGCCATCATCATTCT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVLPIPH*TRHHHS
Trigger: AGAATGATGATGGCGGGTTCAGTGAGGAATGGGAAG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTACCGCCTGTCCCGTGTaGGTGAAGGCACATCCTTAT +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGTACPV*VKAHPY
Trigger: ATAAGGATGTGCCTTCACTCACACGGGACAGGCGGT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGGCCTCAGAAATGGATaGAATAGCTGTGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYGLRNG*NSCGGK
Trigger: TTTCCCTCCACAGCTATTTCATCCATTTCTGAGGCC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCGGCTACGTACAGTATTaGTCAGGTGGTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAGYVQY*SGGCPQ
Trigger: CTGAGGACAACCACCTGAGCAATACTGTACGTAGCC...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGGCTACGTACAGTATTaGTCAGGTGGTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVGYVQY*SGGCPQ
Trigger: CTGAGGACAACCACCTGAGCAATACTGTACGTAGCC...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553855.5
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTACTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTG +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVLRLSL*SCRSLL
Trigger: CAATAGAGAACGGCAGGAGCACAACGACAGACGGAG...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGACTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERLRLSL*SCRSLL
Trigger: CAATAGAGAACGGCAGGAGCACAACGACAGACGGAG...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp CTGACTGACTTAATGGTAGCCACGACCACCACCATGCAGAGAGTCACAGGGACACTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTG +
Preference number: 4 (lower is better)
Translates to: LTDLMVATTTTMQRVTGTLRLSL*SCRSLL
Trigger: CAATAGAGAACGGCAGGAGCACAACGACAGACGGAG...TGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGGCTACCATTAAGTCAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCCACGACCACCACCATaGAGAGAGTCACAGGGACAA +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILPRPPP*RESQGQ
Trigger: TTGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp ACACTGATCATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACACCACGACCACCACCATaGAGAGAGTCACAGGGACAA +
Preference number: 4 (lower is better)
Translates to: TLIMMAAFRIECRALWPTPRPPP*RESQGQ
Trigger: TTGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGG...TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGATCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGCATTCAGAATTGAGTaGAGGGCTCTCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVAFRIE*RALWPT
Trigger: TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAGCATTCAGAATTGAGTaGAGGGCTCTCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERAFRIE*RALWPT
Trigger: TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGC...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATTCCGGGTCTCCTTCTaGCATATTCACCAACCACAC +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVFRVSF*HIHQPH
Trigger: GTGTGGTTGGTGAATATGGCAGAAGGAGACCCGGAA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGACACCAGCGAGGATACTaGTGGAAAGTTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERHQRGY*WKVPGQ
Trigger: CTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGGTG...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATCTGCTGCTGGTGCCTaGTCTTCCTCACAGTACCTC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVSAAGA*SSSQYL
Trigger: GAGGTACTGTGAGGAAGAGCAGGCACCAGCAGCAGA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGTCTGCTGCTGGTGCCTaGTCTTCCTCACAGTACCTC +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILSAAGA*SSSQYL
Trigger: GAGGTACTGTGAGGAAGAGCAGGCACCAGCAGCAGA...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCGCCTTTGTCCAGAGGTaGCCTGAGCCCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSAFVQR*PEPTQA
Trigger: AGCCTGTGTGGGCTCAGGGCACCTCTGGACAAAGGC...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAAT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVCRELP*GRPLDN
Trigger: ATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACTGCTGGAGTCGAAGTaGACCTTTCCAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVLLESK*TFPVNG
Trigger: TCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATATGAGATATGCCTGCTaGAGTCGAAGTGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYMRYAC*SRSGPF
Trigger: GAAAGGTCCACTTCGACTCCAGCAGGCATATCTCAT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGATACTCCCCTTTCCTCTaGGTCTTCACCAGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERYSPFL*VFTSED
Trigger: ATCCTCGCTGGTGAAGACCCAGAGGAAAGGGGAGTA...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATGTTCCAGTCTCCACTaGCTGTTGCTGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVCSSLH*LLLRLY
Trigger: GTAAAGCCTCAGCAACAGCCAGTGGAGACTGGAACA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp CACAGACACACAGACCAACTGGCAATGCTGCCACCACATGTCAGGGCTCAGGGTGTGGTCAGGAAGACTTaGAAGGAAGCTGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: HRHTDQLAMLPPHVRAQGVVRKT*KEAAKV
Trigger: GACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCAC...ACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSNSAR*SGRLGR
Trigger: CCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGACCAGTTGCTCCTCTCTaGCAGGCGCAGGCTCTATGC +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRPVAPL*QAQALC
Trigger: GCATAGAGCCTGCGCCTGCCAGAGAGGAGCAACTGG...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR TCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGACACACAGACCAACTGGCAATGCTGCCACCACATGTCAGGGCTCAGGGTGGTATAAAAGCTGACTaGCTTAATGGTAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: HRHTDQLAMLPPHVRAQGGIKAD*LNGSHD
Trigger: GTCGTGGCTACCATTAAGTCAGTCAGCTTTTATACC...ACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGGTATAAAAGCTGACTaGCTTAATGGTAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYGIKAD*LNGSHD
Trigger: GTCGTGGCTACCATTAAGTCAGTCAGCTTTTATACC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGGCAGCATTCAGAATTaGGTGCAGGGCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSGSIQN*VQGSLA
Trigger: GGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAAGTGGACCTTTCCAGTaGATGGAAATCATTCCCACC +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVSGPFQ*MEIIPT
Trigger: GGTGGGAATGATTTCCATTCACTGGAAAGGTCCACT...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAAAATCACAGCCAAGATaGGCCACGCAGTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERKSQPR*ATQSIQ
Trigger: CTGAATGGACTGCGTGGCTCATCTTGGCTGTGATTT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACAACCACACCATTGTTaGGGAGTAAATGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVQPHHC*GVNESW
Trigger: CCAGCTCTCATTTACTCCTCAACAATGGTGTGGTTG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGACTGGACAGCAGCTCGTaGCTCAGGTGTAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRLDSSS*LRCRAM
Trigger: CATCGCTCTACACCTGAGTCACGAGCTGCTGTCCAG...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGGCATCTGGGGCAAGTaGGCGTACAAGTATGTCTAC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGGIWGK*AYKYVY
Trigger: GTAGACATACTTGTACGCTCACTTGCCCCAGATGCC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGACACACAGACCAACTGGCAATGCTGCCACCACATGTCAGGGCTCAGGGTAGAGGACTATGCAGATaGTCACATGCAGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: HRHTDQLAMLPPHVRAQGRGLCR*SHADVS
Trigger: AGAGACATCTGCATGTGATCATCTGCATAGTCCTCT...ACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATAGCCTCAGAAATGGATaGAATCTCAGGCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSLRNG*NLRPQK
Trigger: TTTCTGAGGCCTGAGATTTCATCCATTTCTGAGGCT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGGCTACGTACAGTATTaGTCAGGTGGTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVGYVQY*SGGCPQ
Trigger: CTGAGGACAACCACCTGAGCAATACTGTACGTAGCC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVLSLCS*RSLLSF
Trigger: GAATGACAATAGAGAACGGCAGGAGCACAACGACAG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553855.5
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGATTCCGGGTCTCCTTCTaGCATATTCACCAACCACAC +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERFRVSF*HIHQPH
Trigger: GTGTGGTTGGTGAATATGGCAGAAGGAGACCCGGAA...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCACCAGCGAGGATACTaGTGGAAAGTTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILHQRGY*WKVPGQ
Trigger: CTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGGTG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACACCAGCGAGGATACTaGTGGAAAGTTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVHQRGY*WKVPGQ
Trigger: CTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGGTG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGGCATACATCTCATTTaGTGTGGAAGAAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYGIHLI*CGRRSD
Trigger: GTCAGACCTTCTTCCACAGCAAATGAGATGTATGCC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAGTTGGTTCTCCTTCTaGCACCAGGTTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVSWFSF*HQVLPQ
Trigger: CTGTGGGAGAACCTGGTGGCAGAAGGAGAACCAACT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCTATTCAGGTGGCTTTaGTGTAGCTGTGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYLFRWL*CSCAFS
Trigger: TGAGAAAGCACAGCTACAGCAAAGCCACCTGAATAG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYLSLCS*RSLLSL
Trigger: TAATGACAATAGAGAACGGCAGGAGCACAACGACAG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357710.8
ENST00000394164.5
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTCACACTCAAACCCCTTaGAAGAGGCAGTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGHTQTP*KRQCAS
Trigger: GCTTGCACACTGCCTCTTGCAAGGGGTTTGAGTGTG...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAAGAGTCACTGGACATaGATGCCTCGAGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVKSHWT*MPRDSP
Trigger: GGGACTGTCTCGAGGCATGCATGTCCAGTGACTCTT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRDNGSG*PRLRLS
Trigger: CGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAAT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVCRELP*GRPLDN
Trigger: ATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGATGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAAT +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERCRELP*GRPLDN
Trigger: ATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGACCTTTCCAGTGAATaGAAATCATTCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYDLSSE*KSFPPH
Trigger: GTGTGGTGGGAATGATTTCCATTCACTGGAAAGGTC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGACTGCTGGAGTCGAAGTaGACCTTTCCAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERLLESK*TFPVNG
Trigger: TCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAG...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAATGAGATATGCCTGCTaGAGTCGAAGTGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVMRYAC*SRSGPF
Trigger: GAAAGGTCCACTTCGACTCCAGCAGGCATATCTCAT...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACTGCTGGAAAGTTCCTaGACAGCAGCTCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVLLESS*TAARDS
Trigger: TGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCAGCGAGGATACTGCTaGAAAGTTCCTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILQRGYC*KVPGQQ
Trigger: CTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATACTCCCCTTTCCTCTaGGTCTTCACCAGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVYSPFL*VFTSED
Trigger: ATCCTCGCTGGTGAAGACCCAGAGGAAAGGGGAGTA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAAATCAAAGGGAAGCTaGAACCCCTGCCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILKSKGS*NPCPPL
Trigger: GAGAGGTGGGCAGGGGTTCCAGCTTCCCTTTGATTT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAAATCAAAGGGAAGCTaGAACCCCTGCCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVKSKGS*NPCPPL
Trigger: GAGAGGTGGGCAGGGGTTCCAGCTTCCCTTTGATTT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGATATCCCCTTCGCTGCTaGAGGCCCCTTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRYPLRC*RPLLFP
Trigger: GGGAAAGAGAAGGGGCCTCCAGCAGCGAAGGGGATA...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCTTTGTTGGTACACTCTaGCCAGCCATTTCACAACGC +
Preference number: 4 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAFVGTL*PAISQR
Trigger: GCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAA...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCAGGCTGGAGTGCACTaGCACAATCTGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSQAGVH*HNLGSL
Trigger: CAGTGAGCCCAGATTGTGCCAGTGCACTCCAGCCTG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTGGTTCTCAGCAGAATaGGGAGTTGAAAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYWFSAE*GVEKGM
Trigger: CATCCCTTTTTCAACTCCCCATTCTGCTGAGAACCA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTCTAGTATTGCTCAGGTaGTTGTCCTCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: SSSSSSCSTTCRELPWGRLVLLR*LSSDIC
Trigger: ACAGATGTCTGAGGACAACCACCTGAGCAATACTAG...ACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR TCA 90 bp CTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTGCTCCTGCCGTTCTCTATTGTCGAAAACAAAGCCTCTTaGGGTTCTTTCTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: LRVAKAPSVVVLLPFSIVENKAS*GSFFHV
Trigger: CACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTC...GACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSRYLL*MGYRLA
Trigger: AGCTAATCTATACCCCATTCACAGAAGATACCGAGA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAAGTGGACCTTTCCAGTaGATGGAAATCATTCCCACC +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERSGPFQ*MEIIPT
Trigger: GGTGGGAATGATTTCCATTCACTGGAAAGGTCCACT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAAAACAAGCCCAAAGGTaGTGGAGATTGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERKQAQR*WRLEEL
Trigger: CAGCTCTTCCAATCTCCATCACCTTTGGGCTTGTTT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR TCA 90 bp CACAGACACACAGACCAACTGGCAATGCTGCCACCACATGTCAGGGCTCAGGGTGGCAATCTACATATTTaGCTTGACTCAAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HRHTDQLAMLPPHVRAQGGNLHI*LDSKRG
Trigger: CCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCC...ACCCTGAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTGTGTGTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGTTTTGTTTCCGATGTaGAACCGCGGACCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRVLFPM*NRGPRS
Trigger: GCTCCGGGGTCCGCGGTTTCACATCGGAAACAAAAC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357710.8
CDS-3UTR TCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATAGCCATTTATATCCCTaGCGTCAGCTGCTTATATTG +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSHLYP*RQLLIL
Trigger: CAATATAAGCAGCTGACGTCAGGGATATAAATGGCT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTACTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVLSLCS*RSLLSF
Trigger: GAATGACAATAGAGAACGGCAGGAGCACAACGACAG...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGATCTTCTTCCTCATCTTaGTCCACCACCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRSSSSS*STTCRE
Trigger: CTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGA...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATATTCCAGATCAGGAGTaGAACAGTAATGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYIPDQE*NSNVVH
Trigger: GTGGACTACATTACTGTTGCACTCCTGATCTGGAAT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATTCCGGGTCTCCTTCTaGCATATTCACCAACCACAC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVFRVSF*HIHQPH
Trigger: GTGTGGTTGGTGAATATGGCAGAAGGAGACCCGGAA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTTTCCGGGTCTCCTTCTaGCATATTCACCAACCACAC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGFRVSF*HIHQPH
Trigger: GTGTGGTTGGTGAATATGGCAGAAGGAGACCCGGAA...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGACTTGGAAGGAAGCTaGAAAAGTCCAGCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGDLEGS*KSPAGN
Trigger: ATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGTCTGCTGCTGGTGCCTaGTCTTCCTCACAGTACCTC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSSAAGA*SSSQYL
Trigger: GAGGTACTGTGAGGAAGAGCAGGCACCAGCAGCAGA...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGGTAATGAGTGTCAGTaGTTGAGAAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYGNECQ*LRRRIA
Trigger: GGCAATTCTTCTTCTCAAGCACTGACACTCATTACC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAATAATGGGACCATCTaGTACCACGACAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILNNGTI*YHDRAA
Trigger: GGCAGCTCTGTCGTGGTAGCAGATGGTCCCATTATT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAATAATGGGACCATCTaGTACCACGACAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVNNGTI*YHDRAA
Trigger: GGCAGCTCTGTCGTGGTAGCAGATGGTCCCATTATT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCCAGACCAACTGGCAATaGTGCCACCACATGTCAGGG +
Preference number: 4 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSQTNWQ*CHHMSG
Trigger: CCCTGACATGTGGTGGCAGCATTGCCAGTTGGTCTG...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTA +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVLSLCS*RSLLSL
Trigger: TAATGACAATAGAGAACGGCAGGAGCACAACGACAG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAACAGTATTGCTCAGGTaGTTGTCCTCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVTVLLR*LSSDIC
Trigger: ACAGATGTCTGAGGACAACCACCTGAGCAATACTGT...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553855.5
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTTGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAAT +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGCRELP*GRPLDN
Trigger: ATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAAT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVCRELP*GRPLDN
Trigger: ATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAATGAGATATGCCTGCTaGAGTCGAAGTGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERMRYAC*SRSGPF
Trigger: GAAAGGTCCACTTCGACTCCAGCAGGCATATCTCAT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCAACCAGCATACGAAGTaGACCTTTCGGACACAAAAC +
Preference number: 4 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPANQHTK*TFRTQN
Trigger: GTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTT...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAAACCAGCATACGAAGTaGACCTTTCGGACACAAAAC +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVNQHTK*TFRTQN
Trigger: GTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTT...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAACCTCAGGTTCAGACTaGCCTTGGGAAGAAATGGCA +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVTSGSD*PWEEMA
Trigger: TGCCATTTCTTCCCAAGGCCAGTCTGAACCTGAGGT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTTAGTATTGCTCAGGTaGTTGTCCTCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYLVLLR*LSSDIC
Trigger: ACAGATGTCTGAGGACAACCACCTGAGCAATACTAA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATATCACCAACACTCAGTaGCTTGTATTTCCGACAATC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYITNTQ*LVFPTI
Trigger: GATTGTCGGAAATACAAGCCACTGAGTGTTGGTGAT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGAGTTGAAAAAGGGATaGTATGGGAAGAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYELKKG*YGKKVI
Trigger: GATCACCTTCTTCCCATACCATCCCTTTTTCAACTC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGACCTGCCCTCTCCTCTTaGCACCCAGGTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRPALSS*HPGSLP
Trigger: TGGAAGAGAACCTGGGTGCCAAGAGGAGAGGGCAGG...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTCCCAGCCTCCACTATaGATTAATATGCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSQPPL*INMPKA
Trigger: TGCTTTAGGCATATTAATCCATAGTGGAGGCTGGGA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR CCA 90 bp ATCATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACAGTCTCGAGTTTGAGATCAGCCTaGCCAATATGGCGAGAACTC +
Preference number: 4 (lower is better)
Translates to: IMMAAFRIECRALWPTVSSLRSA*PIWREL
Trigger: GAGTTCTCGCCATATTGGCCAGGCTGATCTCAAACT...CGAGACTGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGGTATAAAAGCTGACTaGCTTAATGGTAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVGIKAD*LNGSHD
Trigger: GTCGTGGCTACCATTAAGTCAGTCAGCTTTTATACC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR TCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAGGTATAAAAGCTGACTaGCTTAATGGTAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERGIKAD*LNGSHD
Trigger: GTCGTGGCTACCATTAAGTCAGTCAGCTTTTATACC...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVSRYLL*MGYRLA
Trigger: AGCTAATCTATACCCCATTCACAGAAGATACCGAGA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTAGTGGACCTTTCCAGTaGATGGAAATCATTCCCACC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGSGPFQ*MEIIPT
Trigger: GGTGGGAATGATTTCCATTCACTGGAAAGGTCCACT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAGTGGACCTTTCCAGTaGATGGAAATCATTCCCACC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVSGPFQ*MEIIPT
Trigger: GGTGGGAATGATTTCCATTCACTGGAAAGGTCCACT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGAAATCACAGCCAAGATaGGCCACGCAGTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: QLCWYTLASHFTTHYEELKSQPR*ATQSIQ
Trigger: CTGAATGGACTGCGTGGCTCATCTTGGCTGTGATTT...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGCAACAGTGTCTTGTaGCTCCCTTTCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVCNSVL*LPFCAF
Trigger: GAAAGCACAGAAAGGGAGTCACAAGACACTGTTGCA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGCTTCCCATTCCTCACTaGACCCGCCATCATCATTCT +
Preference number: 4 (lower is better)
Translates to: QLCWYTLASHFTTHYEELLPIPH*TRHHHS
Trigger: AGAATGATGATGGCGGGTTCAGTGAGGAATGGGAAG...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAAACAAGCCCAAAGGTaGTGGAGATTGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILKQAQR*WRLEEL
Trigger: CAGCTCTTCCAATCTCCATCACCTTTGGGCTTGTTT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCCTATCATATCTCCTTaGCCTCGTCCCTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILPIISP*PRPSNL
Trigger: CAGATTTGAGGGACGAGGTCAAGGAGATATGATAGG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACCTATCATATCTCCTTaGCCTCGTCCCTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVPIISP*PRPSNL
Trigger: CAGATTTGAGGGACGAGGTCAAGGAGATATGATAGG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGGCATCTGGGGCAAGTaGGCGTACAAGTATGTCTAC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSGIWGK*AYKYVY
Trigger: GTAGACATACTTGTACGCTCACTTGCCCCAGATGCC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGACATGCAGATGTCTCTaGGCTGTGAGCCCGATGACA +
Preference number: 4 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLTCRCL*AVSPMT
Trigger: TGTCATCGGGCTCACAGCTCAGAGACATCTGCATGT...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGTCCTCAGACATCTGTaGATTCTGGAAGTAGGACAA +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVVLRHL*ILEVGQ
Trigger: TTGTCCTACTTCCAGAATGCACAGATGTCTGAGGAC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAGTCCTCAGACATCTGTaGATTCTGGAAGTAGGACAA +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERVLRHL*ILEVGQ
Trigger: TTGTCCTACTTCCAGAATGCACAGATGTCTGAGGAC...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTCTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGLSLCS*RSLLSF
Trigger: GAATGACAATAGAGAACGGCAGGAGCACAACGACAG...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324501.10
ENST00000406768.1
CDS-3UTR GCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAATTCCAGATCAGGAGTaGAACAGTAATGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVIPDQE*NSNVVH
Trigger: GTGGACTACATTACTGTTGCACTCCTGATCTGGAAT...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAATAATGAGATATGCCTaGTGGAGTCGAAGTGGACCT +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERIMRYA*WSRSGP
Trigger: AGGTCCACTTCGACTCCAGCAGGCATATCTCATTAT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCACCAGCGAGGATACTaGTGGAAAGTTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSHQRGY*WKVPGQ
Trigger: CTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGGTG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAAATCTGGTAGTTTCTaGACCGAGGGACACAGTCCA +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILKSGSF*TEGHSP
Trigger: TGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGACATTCCCCATTCTGCTaGTGGTGCCTGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRHSPFC*WCLLFL
Trigger: GAGGAAGAGCAGGCACCAGCAGCAGAATGGGGAATG...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTCTACCACGACAGAGCTaGCTTACTGGCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGLPRQS*LTGCRK
Trigger: TTTTCTACAGCCAGTAAGGCAGCTCTGTCGTGGTAG...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCCCGGCCCAAGGCACCTaGGCCCTGAGACGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICPAQGT*ALRRLR
Trigger: TCGAAGACGTCTCAGGGCGCAGGTGCCTTGGGCCGG...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR CCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAACAGTATTGCTCAGGTaGTTGTCCTCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVTVLLR*LSSDIC
Trigger: ACAGATGTCTGAGGACAACCACCTGAGCAATACTGT...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATTCTCTATTGTCATTCTaGCTACGTACAGTATTGCTC +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSLLSF*LRTVLL
Trigger: GAGCAATACTGTACGTAGCCAGAATGACAATAGAGA...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAGACCTTTCCAGTGAATaGAAATCATTCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERDLSSE*KSFPPH
Trigger: GTGTGGTGGGAATGATTTCCATTCACTGGAAAGGTC...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAAACCAGCATACGAAGTaGACCTTTCGGACACAAAAC +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERNQHTK*TFRTQN
Trigger: GTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCTGCTGGAAAGTTCCTaGACAGCAGCTCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSLLESS*TAARDS
Trigger: TGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGTACTCCCCTTTCCTCTaGGTCTTCACCAGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLYSPFL*VFTSED
Trigger: ATCCTCGCTGGTGAAGACCCAGAGGAAAGGGGAGTA...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAAAATCAAAGGGAAGCTaGAACCCCTGCCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRKSKGS*NPCPPL
Trigger: GAGAGGTGGGCAGGGGTTCCAGCTTCCCTTTGATTT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGGGCCTTGGGAAGAAATaGCAATCACAGACGGTAATG +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILGLGKK*QSQTVM
Trigger: CATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCC...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGGCCTTGGGAAGAAATaGCAATCACAGACGGTAATG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGGLGKK*QSQTVM
Trigger: CATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGGTTCAGACTGGCCTTaGGAAGAAATGGCAATCACA +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGGSDWP*EEMAIT
Trigger: TGTGATTGCCATTTCTTCCCAAGGCCAGTCTGAACC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCTTTCCCCTTGGCAGTTaGTTCTCCTTCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSFPLGS*FSFCHQ
Trigger: CTGGTGGCAGAAGGAGAACCAACTGCCAAGGGGAAA...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGATGCACTGGCACAATCTaGGCTCACTGTAACCTCCGC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRCTGTI*AHCNLR
Trigger: GCGGAGGTTACAGTGAGCCCAGATTGTGCCAGTGCA...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATGCCAGCCAGCTCAGTaGAGGGTCAGGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKCQPAQ*RVRVAA
Trigger: GGCTGCCACCCTGACCCTCCACTGAGCTGGCTGGCA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGCGGCCATTCGGGGATaGCCAGGTGCCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKAAIRG*PGASQL
Trigger: GAGCTGGCTGGCACCTGGCCATCCCCGAATGGCCGC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAAACACAAGAGTCACTaGACATGCATGCCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILKHKSH*TCMPRD
Trigger: GTCTCGAGGCATGCATGTCCAGTGACTCTTGTGTTT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR TCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGGGTATAAAAGCTGACTaGCTTAATGGTAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILGIKAD*LNGSHD
Trigger: GTCGTGGCTACCATTAAGTCAGTCAGCTTTTATACC...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGGTATAAAAGCTGACTaGCTTAATGGTAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGGIKAD*LNGSHD
Trigger: GTCGTGGCTACCATTAAGTCAGTCAGCTTTTATACC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVSRYLL*MGYRLA
Trigger: AGCTAATCTATACCCCATTCACAGAAGATACCGAGA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR TCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGATCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERSRYLL*MGYRLA
Trigger: AGCTAATCTATACCCCATTCACAGAAGATACCGAGA...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATTGTTGAGGAGTAAATaGGAGCTGGAAAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVLLRSK*ELEKAF
Trigger: AAACGCTTTTTCCAGCTCTCATTTACTCCTCAACAA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR TCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAAGTTCGCAGTGTCAGTaGAATCGTCCTGTGACCACG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRSSQCQ*NRPVTT
Trigger: CGTGGTCACAGGACGATTTCACTGACACTGCGAACT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGGCATCTGGGGCAAGTaGGCGTACAAGTATGTCTAC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRGIWGK*AYKYVY
Trigger: GTAGACATACTTGTACGCTCACTTGCCCCAGATGCC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCCTGAGGTGGATTACTTaGGCCCAGGAGTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSLRWIT*AQEFKS
Trigger: AGACTTGAACTCCTGGGCTCAAGTAATCCACCTCAG...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAACTCCTGACCCCAGGTaGTCCACCTGCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKTPDPR*STCLGL
Trigger: GAGACCGAGGCAGGTGGATCACCTGGGGTCAGGAGT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGACAGTGTGCAAGCGAGTaGGTGAGTGTGGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRQCASE*VSVGIR
Trigger: TCTGATTCCCACACTCACTCACTCGCTTGCACACTG...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTATAATGAGATATGCCTaGTGGAGTCGAAGTGGACCT +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGIMRYA*WSRSGP
Trigger: AGGTCCACTTCGACTCCAGCAGGCATATCTCATTAT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAAATCATAATGAGATATaGCTGCTGGAGTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERNHNEI*LLESKW
Trigger: CCACTTCGACTCCAGCAGGCATATCTCATTATGATT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR GCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGCTGTTTGTGTGTTTTaGCTGACTGAGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSAVCVF*LTELPR
Trigger: TCTGGGCAGCTCAGTCAGGCAAAACACACAAACAGC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTACCAACTGGCAATGCTaGCACCACATGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFATNWQC*HHMSGL
Trigger: GAGCCCTGACATGTGGTGGCAGCATTGCCAGTTGGT...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTA +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVLSLCS*RSLLSL
Trigger: TAATGACAATAGAGAACGGCAGGAGCACAACGACAG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357710.8
ENST00000394164.5
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAAAGATCTGTGTCTCATaGTCACCTTATAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVKICVS*SPYSTC
Trigger: ACAGGTGCTATAAGGTGAGCATGAGACACAGATCTT...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAATCGGGGATGGCCAGGTaGCAGCCAGCTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKSGMAR*QPAQWR
Trigger: CCTCCACTGAGCTGGCTGGCACCTGGCCATCCCCGA...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAACAGTATTGCTCAGGTaGTTGTCCTCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVTVLLR*LSSDIC
Trigger: ACAGATGTCTGAGGACAACCACCTGAGCAATACTGT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGTGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAAT +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSCRELP*GRPLDN
Trigger: ATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGACCTTTCCAGTGAATaGAAATCATTCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGDLSSE*KSFPPH
Trigger: GTGTGGTGGGAATGATTTCCATTCACTGGAAAGGTC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCTGCTGGAGTCGAAGTaGACCTTTCCAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSLLESK*TFPVNG
Trigger: TCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGATGAGATATGCCTGCTaGAGTCGAAGTGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: QLCWYTLASHFTTHYEELMRYAC*SRSGPF
Trigger: GAAAGGTCCACTTCGACTCCAGCAGGCATATCTCAT...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTAACCAGCATACGAAGTaGACCTTTCGGACACAAAAC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGNQHTK*TFRTQN
Trigger: GTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGACAGCGAGGATACTGCTaGAAAGTTCCTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRQRGYC*KVPGQQ
Trigger: CTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTG...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATATGAAGAGTTCCGTTTaGTTTAAACCACTTCACCTA +
Preference number: 4 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYMKSSV*FKPLHL
Trigger: TAGGTGAAGTGGTTTAAACCAAACGGAACTCTTCAT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGAAAACAAAGCCTCTTaGGGTTCTTTCTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVENKAS*GSFFHV
Trigger: CACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR TCA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATGGCAGCATTCAGAATTaGGTGCAGGGCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LYKIICGKVENKPKGDGDGSIQN*VQGSLA
Trigger: GGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCC...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGAGTGGACCTTTCCAGTaGATGGAAATCATTCCCACC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSSGPFQ*MEIIPT
Trigger: GGTGGGAATGATTTCCATTCACTGGAAAGGTCCACT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGTGCAACAGTGTCTTGTaGCTCCCTTTCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSCNSVL*LPFCAF
Trigger: GAAAGCACAGAAAGGGAGTCACAAGACACTGTTGCA...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATCTGGACAGCAGCTCGTaGCTCAGGTGTAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: LYKIICGKVENKPKGDGDLDSSS*LRCRAM
Trigger: CATCGCTCTACACCTGAGTCACGAGCTGCTGTCCAG...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGAAACAAGCCCAAAGGTaGTGGAGATTGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSKQAQR*WRLEEL
Trigger: CAGCTCTTCCAATCTCCATCACCTTTGGGCTTGTTT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCACAGTCCACTGCGATaGAGTATGTTCAAAATCGTT +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILHSPLR*SMFKIV
Trigger: AACGATTTTGAACATACTTCATCGCAGTGGACTGTG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTCACAGTCCACTGCGATaGAGTATGTTCAAAATCGTT +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGHSPLR*SMFKIV
Trigger: AACGATTTTGAACATACTTCATCGCAGTGGACTGTG...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGGCAATCTACATATTTaGCTTGACTCAAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGGNLHI*LDSKRG
Trigger: CCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTATGAGTGTCAGTGCTTaGGAAGAAGAATTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGMSVSA*EEELPK
Trigger: CTTTGGCAATTCTTCTTCTCAAGCACTGACACTCAT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAATGAGTGTCAGTGCTTaGGAAGAAGAATTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVMSVSA*EEELPK
Trigger: CTTTGGCAATTCTTCTTCTCAAGCACTGACACTCAT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCTATTTGTTCAAATTCTaGGCTACTGTGTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAYLFKF*ATVWQK
Trigger: CTTTTGCCACACAGTAGCTCAGAATTTGAACAAATA...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCCACACACGAACCTACTaGGAACCAAAAACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSHTRTY*EPKTGR
Trigger: CCTTCCTGTTTTTGGTTCTCAGTAGGTTCGTGTGTG...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGTTTCACAACGCACTATaGAGAGCTGAAACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILFHNAL*RAETSV
Trigger: AACAGAGGTTTCAGCTCTTCATAGTGCGTTGTGAAA...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCTGTGGGAGACAGCTTTaGTGTTCAAGAAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSCGRQL*CSRKGF
Trigger: GAACCCCTTTCTTGAACATCAAAGCTGTCTCCCACA...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGGAGCTAAAAAGACCCTaGATTGACAATGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILELKRP*IDNGKF
Trigger: GAACTTCCCATTGTCAATTCAGGGTCTTTTTAGCTC...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGACTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTC +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRLSLCS*RSLLSF
Trigger: GAATGACAATAGAGAACGGCAGGAGCACAACGACAG...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324501.10
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTCTTGCTCCACCACCTaGCGGGAGTTACCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICSCSTT*RELPWG
Trigger: ACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp CTGACTGACTTAATGGTAGCCACGACCACCACCATGCAGAGAGTCACAGGGACAAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 4 (lower is better)
Translates to: LTDLMVATTTTMQRVTGTKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...TGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGGCTACCATTAAGTCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR GCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTGCATTCAGAATTGAGTaGAGGGCTCTCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFAAFRIE*RALWPT
Trigger: TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGC...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTATTCCAGATCAGGAGTaGAACAGTAATGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGIPDQE*NSNVVH
Trigger: GTGGACTACATTACTGTTGCACTCCTGATCTGGAAT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAATCATAATGAGATATaGCTGCTGGAGTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILNHNEI*LLESKW
Trigger: CCACTTCGACTCCAGCAGGCATATCTCATTATGATT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAATCATAATGAGATATaGCTGCTGGAGTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVNHNEI*LLESKW
Trigger: CCACTTCGACTCCAGCAGGCATATCTCATTATGATT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGTGACTCCCTTTCTGTaGTTTCTGCATTATACTTGG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGVTPFL*FLHYTW
Trigger: CCAAGTATAATGCAGAAAGCACAGAAAGGGAGTCAC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCCTACCACGACAGAGCTaGCTTACTGGCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSLPRQS*LTGCRK
Trigger: TTTTCTACAGCCAGTAAGGCAGCTCTGTCGTGGTAG...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGCTGTATCCCCTTCGCTaGTGGAGGCCCCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWLYPLR*WRPLLF
Trigger: AAAGAGAAGGGGCCTCCAGCAGCGAAGGGGATACAG...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGACTCGGTCTCCCAAAGTaGTGGGATTATAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRLGLPK*WDYRSE
Trigger: CTCACTCCTATAATCCCAGCACTTTGGGAGACCGAG...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGGACTTCGCCCAGAATaGTCGTCGCCCCTGGACAAG +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICGLRPE*SSPLDK
Trigger: CTTGTCCAGGGGCGACGAGCATTCTGGGCGAAGTCC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS-3UTR CCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATCTCTATTGTCATTCTaGCTACGTACAGTATTGCTC +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVSLLSF*LRTVLL
Trigger: GAGCAATACTGTACGTAGCCAGAATGACAATAGAGA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGATGCCGGGAGTTACCCTaGGGTCGTCCATTAGATAAT +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRCRELP*GRPLDN
Trigger: ATTATCTAATGGACGACCCCAGGGTAACTCCCGGCA...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGACTGCTGGAGTCGAAGTaGACCTTTCCAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRLLESK*TFPVNG
Trigger: TCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAG...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGATGTTCCAGTCTCCACTaGCTGTTGCTGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRCSSLH*LLLRLY
Trigger: GTAAAGCCTCAGCAACAGCCAGTGGAGACTGGAACA...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGTGGTCAGGAAGACTTaGAAGGAAGCTGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSVVRKT*KEAAKV
Trigger: GACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCAC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGTCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSSNSAR*SGRLGR
Trigger: CCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGA...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGGGTTCAGACTGGCCTTaGGAAGAAATGGCAATCACA +
Preference number: 4 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLGSDWP*EEMAIT
Trigger: TGTGATTGCCATTTCTTCCCAAGGCCAGTCTGAACC...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGGTTCAGACTGGCCTTaGGAAGAAATGGCAATCACA +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSGSDWP*EEMAIT
Trigger: TGTGATTGCCATTTCTTCCCAAGGCCAGTCTGAACC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTTGCTGCCCAAGGCTGTaGGAGACAGCTTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFACCPRL*ETALMF
Trigger: GAACATCAAAGCTGTCTCCCACAGCCTTGGGCAGCA...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGTTAGTATTGCTCAGGTaGTTGTCCTCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILLVLLR*LSSDIC
Trigger: ACAGATGTCTGAGGACAACCACCTGAGCAATACTAA...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAATAAGAAGAACAGGGTaGAAAGCAAAGATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVIRRTG*KAKICV
Trigger: GACACAGATCTTTGCTTTCCACCCTGTTCTTCTTAT...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAGAAAACAAAGCCTCTTaGGGTTCTTTCTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVENKAS*GSFFHV
Trigger: CACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTC...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGAAAACAAAGCCTCTTaGGGTTCTTTCTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGENKAS*GSFFHV
Trigger: CACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGGCAGCATTCAGAATTaGGTGCAGGGCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICGSIQN*VQGSLA
Trigger: GGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATTGTTGAGGAGTAAATaGGAGCTGGAAAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVLLRSK*ELEKAF
Trigger: AAACGCTTTTTCCAGCTCTCATTTACTCCTCAACAA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGACAACCACACCATTGTTaGGGAGTAAATGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRQPHHC*GVNESW
Trigger: CCAGCTCTCATTTACTCCTCAACAATGGTGTGGTTG...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACTGGACAGCAGCTCGTaGCTCAGGTGTAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKLDSSS*LRCRAM
Trigger: CATCGCTCTACACCTGAGTCACGAGCTGCTGTCCAG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATCAGTTAAGTTACTGTaGCAAGAATACCCAACCATA +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVSVKLL*QEYPTI
Trigger: TATGGTTGGGTATTCTTGTCACAGTAACTTAACTGA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR GCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAGTCCTCAGACATCTGTaGATTCTGGAAGTAGGACAA +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRVLRHL*ILEVGQ
Trigger: TTGTCCTACTTCCAGAATGCACAGATGTCTGAGGAC...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR GCA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTG +
Preference number: 4 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWLRLSL*SCRSLL
Trigger: CAATAGAGAACGGCAGGAGCACAACGACAGACGGAG...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAATCTTGCTCCACCACCTaGCGGGAGTTACCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKSCSTT*RELPWG
Trigger: ACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATCCACGACCACCACCATaGAGAGAGTCACAGGGACAA +
Preference number: 4 (lower is better)
Translates to: LYKIICGKVENKPKGDGDPRPPP*RESQGQ
Trigger: TTGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGG...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR GCA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGATTCCAGATCAGGAGTaGAACAGTAATGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: QLCWYTLASHFTTHYEELIPDQE*NSNVVH
Trigger: GTGGACTACATTACTGTTGCACTCCTGATCTGGAAT...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGATAATGAGATATGCCTaGTGGAGTCGAAGTGGACCT +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSIMRYA*WSRSGP
Trigger: AGGTCCACTTCGACTCCAGCAGGCATATCTCATTAT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAAAATCTGGTAGTTTCTaGACCGAGGGACACAGTCCA +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRKSGSF*TEGHSP
Trigger: TGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTAATAATGGGACCATCTaGTACCACGACAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFANNGTI*YHDRAA
Trigger: GGCAGCTCTGTCGTGGTAGCAGATGGTCCCATTATT...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGGCATACATCTCATTTaGTGTGGAAGAAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSGIHLI*CGRRSD
Trigger: GTCAGACCTTCTTCCACAGCAAATGAGATGTATGCC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGCTTTCCCCAACTCTTaGTTTGTGTTGATACAACTA +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGAFPNS*FVLIQL
Trigger: TAGTTGTATCAACACAAAGCAAGAGTTGGGGAAAGC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTACAGACAGGCTCTTTCTaGATTATACTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: PARILLESSWTAARDSGVQTGSF*IILGIF
Trigger: AAAAATTCCAAGTATAATGCAGAAAGAGCCTGTCTG...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGATAATGGCTCAGGGTaGCCAAGGCTCCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICDNGSG*PRLRLS
Trigger: CGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGAGTGCAGGGCTCTCTaGCCCACAGTCTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDECRAL*PTVSVS
Trigger: AGATACCGAGACTGTGGGCCAGAGAGCCCTGCACTC...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAGACCTTTCCAGTGAATaGAAATCATTCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRDLSSE*KSFPPH
Trigger: GTGTGGTGGGAATGATTTCCATTCACTGGAAAGGTC...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAATGAGATATGCCTGCTaGAGTCGAAGTGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRMRYAC*SRSGPF
Trigger: GAAAGGTCCACTTCGACTCCAGCAGGCATATCTCAT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGAACCAGCATACGAAGTaGACCTTTCGGACACAAAAC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSNQHTK*TFRTQN
Trigger: GTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAGGAGTAAATGAGAGCTaGAAAAAGCGTTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: RILLESSWTAARDSGVERGVNES*KKRFIS
Trigger: AGAAATGAAACGCTTTTTCCAGCTCTCATTTACTCC...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGCTGCTGGAAAGTTCCTaGACAGCAGCTCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLLLESS*TAARDS
Trigger: TGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAG...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGTGGTCAGGAAGACTTaGAAGGAAGCTGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRVVRKT*KEAAKV
Trigger: GACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCAC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGATCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRSNSAR*SGRLGR
Trigger: CCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGA...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGGCCTTGGGAAGAAATaGCAATCACAGACGGTAATG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRGLGKK*QSQTVM
Trigger: CATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACTGGACAGCAGCTCGTaGCTCAGGTGTAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKLDSSS*LRCRAM
Trigger: CATCGCTCTACACCTGAGTCACGAGCTGCTGTCCAG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATCTACATATTTGACTTaGCTCAAAGAGAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVSTYLT*LKERGK
Trigger: TTTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGTCTACATATTTGACTTaGCTCAAAGAGAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILSTYLT*LKERGK
Trigger: TTTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGA...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAGGCAATCTACATATTTaGCTTGACTCAAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRGNLHI*LDSKRG
Trigger: CCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCC...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTTATTCACAGTCTGTCTaGATTAAGTACAAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGYSQSV*IKYKAV
Trigger: CACTGCTTTGTACTTAATTCAGACAGACTGTGAATA...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAGCTGAAATATTTTTATaGGCACAGGATAGGGGCATG +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRAEIFL*AQDRGM
Trigger: CATGCCCCTATCCTGTGCTCATAAAAATATTTCAGC...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR TCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAAAAAGACCCTGAATTaGCAATGGGAAGTTCATCAA +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVKKTLN*QWEVHQ
Trigger: TTGATGAACTTCCCATTGTCAATTCAGGGTCTTTTT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGACTCAGGAATCAATATaGCACAGAAGCCAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSTQESI*HRSQKW
Trigger: CCACTTTTGGCTTCTGTGTCATATTGATTCCTGAGT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATCTTCTTCCTCATCTTaGTCCACCACCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKSSSSS*STTCRE
Trigger: CTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACCACGACCACCACCATaGAGAGAGTCACAGGGACAA +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKPRPPP*RESQGQ
Trigger: TTGTCCCTGTGACTCTCTGCATGGTGGTGGTCGTGG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAATCATAATGAGATATaGCTGCTGGAGTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLNHNEI*LLESKW
Trigger: CCACTTCGACTCCAGCAGGCATATCTCATTATGATT...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTAAATCTGGTAGTTTCTaGACCGAGGGACACAGTCCA +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFAKSGSF*TEGHSP
Trigger: TGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTT...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACATTCCCCATTCTGCTaGTGGTGCCTGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKHSPFC*WCLLFL
Trigger: GAGGAAGAGCAGGCACCAGCAGCAGAATGGGGAATG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGGTAATGAGTGTCAGTaGTTGAGAAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSGNECQ*LRRRIA
Trigger: GGCAATTCTTCTTCTCAAGCACTGACACTCATTACC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGGCATACATCTCATTTaGTGTGGAAGAAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRGIHLI*CGRRSD
Trigger: GTCAGACCTTCTTCCACAGCAAATGAGATGTATGCC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGAGTGCAGGGCTCTCTaGCCCACAGTCTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKECRAL*PTVSVS
Trigger: AGATACCGAGACTGTGGGCCAGAGAGCCCTGCACTC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGGGAGTAAATGAGAGCTaGAAAAAGCGTTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILGVNES*KKRFIS
Trigger: AGAAATGAAACGCTTTTTCCAGCTCTCATTTACTCC...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGGAGTAAATGAGAGCTaGAAAAAGCGTTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGGVNES*KKRFIS
Trigger: AGAAATGAAACGCTTTTTCCAGCTCTCATTTACTCC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAGGAGTAAATGAGAGCTaGAAAAAGCGTTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVGVNES*KKRFIS
Trigger: AGAAATGAAACGCTTTTTCCAGCTCTCATTTACTCC...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATCTGCTGGAAAGTTCCTaGACAGCAGCTCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: LYKIICGKVENKPKGDGDLLESS*TAARDS
Trigger: TGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAG...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTACAAACCAATTAATATaGCTACGAAACAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGTNQLI*LRNRLW
Trigger: CCATAGCCTGTTTCGTAGCCATATTAATTGGTTTGT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACAAACCAATTAATATaGCTACGAAACAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILTNQLI*LRNRLW
Trigger: CCATAGCCTGTTTCGTAGCCATATTAATTGGTTTGT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAAAAGGTGATGGAGATTaGAAGAGCTGGCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRKGDGD*KSWQCF
Trigger: AAAGCATTGCCAGCTCTTCCAATCTCCATCACCTTT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTGTACAAGATAATCTGTaGCAAAGTAGAAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGVQDNL*QSRKQA
Trigger: GGCTTGTTTTCTACTTTGCCACAGATTATCTTGTAC...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAATGAAGAGTTCCGTTTaGTTTAAACCACTTCACCTA +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVMKSSV*FKPLHL
Trigger: TAGGTGAAGTGGTTTAAACCAAACGGAACTCTTCAT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTACATTACACATGCACCTaGCTTCCTTTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: PASASEPGITHAPGFLFVHYTCT*LPFCIF
Trigger: AAAAATACAAAAAGGAAGCCAGGTGCATGTGTAATG...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394157.7
3UTR CAA 72 bp AAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTaGTTAGATGTGGACACAGGAAAATCACCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KEAAKVQPGILT*LDVDTGKSPLS
Trigger: GGACAAAGGTGATTTTCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR CAA 72 bp ACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTaGACTTTGTTAGATGTGGACACAGGAAAATCACCT +
Preference number: 4 (lower is better)
Translates to: TWKEAAKVQPGI*TLLDVDTGKSP
Trigger: AGGTGATTTTCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATCAGGGACAAAGAGCATaGTCACATGCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDQGQRA*SHAWRH
Trigger: ATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTG...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR TCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGATCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRSRYLL*MGYRLA
Trigger: AGCTAATCTATACCCCATTCACAGAAGATACCGAGA...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGAGTGGACCTTTCCAGTaGATGGAAATCATTCCCACC +
Preference number: 4 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWSGPFQ*MEIIPT
Trigger: GGTGGGAATGATTTCCATTCACTGGAAAGGTCCACT...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGTGCAACAGTGTCTTGTaGCTCCCTTTCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWCNSVL*LPFCAF
Trigger: GAAAGCACAGAAAGGGAGTCACAAGACACTGTTGCA...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGAAACAAGCCCAAAGGTaGTGGAGATTGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLKQAQR*WRLEEL
Trigger: CAGCTCTTCCAATCTCCATCACCTTTGGGCTTGTTT...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCAGTTCGCAGTGTCAGTaGAATCGTCCTGTGACCACG +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICSSQCQ*NRPVTT
Trigger: CGTGGTCACAGGACGATTTCACTGACACTGCGAACT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGGCAATCTACATATTTaGCTTGACTCAAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRGNLHI*LDSKRG
Trigger: CCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCTGTGTTTTGCCTGACTaGGCTGCCCAGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: FGILTQINYSRLGIPQECCVLPD*AAQSLN
Trigger: GTTCAGGCTCTGGGCAGCTCAGTCAGGCAAAACACA...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGAATACATACACTGTCTaGGGCCACGTAAATAACAAG +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSNTYTV*GHVNNK
Trigger: CTTGTTATTTACGTGGCCTCAGACAGTGTATGTATT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTG +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKLRLSL*SCRSLL
Trigger: CAATAGAGAACGGCAGGAGCACAACGACAGACGGAG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTG +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDLRLSL*SCRSLL
Trigger: CAATAGAGAACGGCAGGAGCACAACGACAGACGGAG...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR GCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAGCATTCAGAATTGAGTaGAGGGCTCTCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKAFRIE*RALWPT
Trigger: TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGC...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGCATTCAGAATTGAGTaGAGGGCTCTCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICAFRIE*RALWPT
Trigger: TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGCATTCAGAATTGAGTaGAGGGCTCTCTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDAFRIE*RALWPT
Trigger: TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGC...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR GCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGTGACTCCCTTTCTGTaGTTTCTGCATTATACTTGG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRVTPFL*FLHYTW
Trigger: CCAAGTATAATGCAGAAAGCACAGAAAGGGAGTCAC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATCACCAGCGAGGATACTaGTGGAAAGTTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDHQRGY*WKVPGQ
Trigger: CTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGGTG...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR GCA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCCATTCCCCATTCTGCTaGTGGTGCCTGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FGILTQINYSRLGIPQECHSPFC*WCLLFL
Trigger: GAGGAAGAGCAGGCACCAGCAGCAGAATGGGGAATG...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCTTGAGAAGAAGAATTaGCAAAGGCAATCTACATAT +
Preference number: 4 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILLEKKN*QRQSTY
Trigger: ATATGTAGATTGCCTTTGGCAATTCTTCTTCTCAAG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACTTGAGAAGAAGAATTaGCAAAGGCAATCTACATAT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVLEKKN*QRQSTY
Trigger: ATATGTAGATTGCCTTTGGCAATTCTTCTTCTCAAG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAGCAGGCACCTCCACTaGCCAGTTCACACAAAGGTA +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKSRHLH*PVHTKV
Trigger: TACCTTTGTGTGAACTGGGCAGTGGAGGTGCCTGCT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAAGACAGTCCTGTACTTaGTACTATATGCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRRQSCT*YYMQLT
Trigger: AGTCAGCTGCATATAGTAGCAAGTACAGGACTGTCT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATCAGCGAGGATACTGCTaGAAAGTTCCTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDQRGYC*KVPGQQ
Trigger: CTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTG...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAAGAAGAAACATCCATaGGATTCTAACCGCAAATAT +
Preference number: 4 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVKKKHP*DSNRKY
Trigger: ATATTTGCGGTTAGAATCCCATGGATGTTTCTTCTT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGGGCCTTGGGAAGAAATaGCAATCACAGACGGTAATG +
Preference number: 4 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWGLGKK*QSQTVM
Trigger: CATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCC...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTATCTATTTTTCATGGTaGAAGACTAGCATTTGGATG +
Preference number: 4 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGIYFSW*KTSIWM
Trigger: CATCCAAATGCTAGTCTTCCACCATGAAAAATAGAT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACAAAGCCTTGGGGGTTaGGATCAAAGGCTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKQSLGG*DQRLPA
Trigger: TGCGGGAAGCCTTTGATCCCAACCCCCAAGGCTTTG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAATCCTCCCAAGTAGCTaGGATTATGGTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKILPSS*DYGAHH
Trigger: GTGGTGGGCACCATAATCCCAGCTACTTGGGAGGAT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406768.1
3UTR CAA 72 bp CTTACTGTCTTCCATCTTTTTATTAAGCAGATTGGCTaGGCTGGTCATACTCTACTGCTGGTTTTGCCCGAC +
Preference number: 4 (lower is better)
Translates to: LTVFHLFIKQIG*AGHTLLLVLPD
Trigger: GTCGGGCAAAACCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGACAGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp CACCTGTATTTATACAGAACCACCAGGAGGATAGTCATGACAACAATGACACTGGGTATAAAAGCTGACTaGCTTAATGGTAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: HLYLYRTTRRIVMTTMTLGIKAD*LNGSHD
Trigger: GTCGTGGCTACCATTAAGTCAGTCAGCTTTTATACC...CAGTGTCATTGTTGTCATGACTATCCTCCTGGTGGTTCTGTATAAATACAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR TCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTTCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFASRYLL*MGYRLA
Trigger: AGCTAATCTATACCCCATTCACAGAAGATACCGAGA...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp TCTGTCGTTGTGCTCCTGCCGTTCTCTATTGTCATTATGAAATATCTAGCCAGCTCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: SVVVLLPFSIVIMKYLASSRYLL*MGYRLA
Trigger: AGCTAATCTATACCCCATTCACAGAAGATACCGAGA...GCTGGCTAGATATTTCATAATGACAATAGAGAACGGCAGGAGCACAACGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAAATCACAGCCAAGATaGGCCACGCAGTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKKSQPR*ATQSIQ
Trigger: CTGAATGGACTGCGTGGCTCATCTTGGCTGTGATTT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATTGGATACTCTCCTTTaGGCTTCCGGGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKLDTLL*ASGSPS
Trigger: AGAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTTGGATACTCTCCTTTaGGCTTCCGGGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICLDTLL*ASGSPS
Trigger: AGAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACTTCCCATTCCTCACTaGACCCGCCATCATCATTCT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKLPIPH*TRHHHS
Trigger: AGAATGATGATGGCGGGTTCAGTGAGGAATGGGAAG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAACGTGTAGTTTAAGATaGAGAGTTCCGTTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRTCSLR*RVPFGL
Trigger: TAAACCAAACGGAACTCTTCATCTTAAACTACACGT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGATCTACATATTTGACTTaGCTCAAAGAGAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRSTYLT*LKERGK
Trigger: TTTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGA...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGTCTACATATTTGACTTaGCTCAAAGAGAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSSTYLT*LKERGK
Trigger: TTTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGA...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCCCTGTCCCGTGTGAGTaGAGGCACATCCTTATGGAA +
Preference number: 4 (lower is better)
Translates to: FGILTQINYSRLGIPQECPVPCE*RHILME
Trigger: TTCCATAAGGATGTGCCTTCACTCACACGGGACAGG...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTTCCGGGTCTCCTTCTaGCATATTCACCAACCACAC +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICFRVSF*HIHQPH
Trigger: GTGTGGTTGGTGAATATGGCAGAAGGAGACCCGGAA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACACCAGCGAGGATACTaGTGGAAAGTTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKHQRGY*WKVPGQ
Trigger: CTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGGTG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGACTTGGAAGGAAGCTaGAAAAGTCCAGCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICDLEGS*KSPAGN
Trigger: ATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCAATAATGGGACCATCTaGTACCACGACAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICNNGTI*YHDRAA
Trigger: GGCAGCTCTGTCGTGGTAGCAGATGGTCCCATTATT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CACCTGTATTTATACAGAACCACCAGGAGGATAGTCATGACAACAATGACACTGCTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTA +
Preference number: 4 (lower is better)
Translates to: HLYLYRTTRRIVMTTMTLLSLCS*RSLLSL
Trigger: TAATGACAATAGAGAACGGCAGGAGCACAACGACAG...CAGTGTCATTGTTGTCATGACTATCCTCCTGGTGGTTCTGTATAAATACAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR GCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGATTGAAGGGTAGTATATaGAGAAGATTGTATTGCACG +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRLKGSI*RRLYCT
Trigger: CGTGCAATACAATCTTCTGCATATACTACCCTTCAA...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTTGCAAGAGGCAGTGTaGAAGCGAGTGAGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICLQEAV*KRVSEC
Trigger: ACACTCACTCACTCGCTTGCACACTGCCTCTTGCAA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACAGCGAGGATACTGCTaGAAAGTTCCTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKQRGYC*KVPGQQ
Trigger: CTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAATACTCCCCTTTCCTCTaGGTCTTCACCAGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKYSPFL*VFTSED
Trigger: ATCCTCGCTGGTGAAGACCCAGAGGAAAGGGGAGTA...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTGTTCCAGTCTCCACTaGCTGTTGCTGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICCSSLH*LLLRLY
Trigger: GTAAAGCCTCAGCAACAGCCAGTGGAGACTGGAACA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCGTACAAGATAATCTGTaGCAAAGTAGAAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSVQDNL*QSRKQA
Trigger: GGCTTGTTTTCTACTTTGCCACAGATTATCTTGTAC...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGAAGGTGCAACACATTTaGGATCCTTACACAAATAAA +
Preference number: 4 (lower is better)
Translates to: QLCWYTLASHFTTHYEELKVQHI*DPYTNK
Trigger: TTTATTTGTGTAAGGATCCCAAATGTGTTGCACCTT...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGCACTGTCTAACAATGTaGCTGAGATGTGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWHCLTM*LRCGSN
Trigger: GTTTGAGCCACATCTCAGCCACATTGTTAGACAGTG...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATGGTATAAAAGCTGACTaGCTTAATGGTAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: LYKIICGKVENKPKGDGDGIKAD*LNGSHD
Trigger: GTCGTGGCTACCATTAAGTCAGTCAGCTTTTATACC...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR TCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAAAATCACAGCCAAGATaGGCCACGCAGTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKKSQPR*ATQSIQ
Trigger: CTGAATGGACTGCGTGGCTCATCTTGGCTGTGATTT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCCAACCACACCATTGTTaGGGAGTAAATGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICQPHHC*GVNESW
Trigger: CCAGCTCTCATTTACTCCTCAACAATGGTGTGGTTG...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTGCAACAGTGTCTTGTaGCTCCCTTTCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICCNSVL*LPFCAF
Trigger: GAAAGCACAGAAAGGGAGTCACAAGACACTGTTGCA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCAAACAAGCCCAAAGGTaGTGGAGATTGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICKQAQR*WRLEEL
Trigger: CAGCTCTTCCAATCTCCATCACCTTTGGGCTTGTTT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACCTATCATATCTCCTTaGCCTCGTCCCTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKPIISP*PRPSNL
Trigger: CAGATTTGAGGGACGAGGTCAAGGAGATATGATAGG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGATGAGTGTCAGTGCTTaGGAAGAAGAATTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWMSVSA*EEELPK
Trigger: CTTTGGCAATTCTTCTTCTCAAGCACTGACACTCAT...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACGCACCCAGCCCAGCTaGAATATTTTTATGAGCACA +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKRTQPS*NIFMST
Trigger: TGTGCTCATAAAAATATTTCAGCTGGGCTGGGTGCG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR GCA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCTTCCGGGTCTCCTTCTaGCATATTCACCAACCACAC +
Preference number: 4 (lower is better)
Translates to: FGILTQINYSRLGIPQECFRVSF*HIHQPH
Trigger: GTGTGGTTGGTGAATATGGCAGAAGGAGACCCGGAA...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCTTGAGAAGAAGAATTaGCAAAGGCAATCTACATAT +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSLEKKN*QRQSTY
Trigger: ATATGTAGATTGCCTTTGGCAATTCTTCTTCTCAAG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGACTTGAGAAGAAGAATTaGCAAAGGCAATCTACATAT +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRLEKKN*QRQSTY
Trigger: ATATGTAGATTGCCTTTGGCAATTCTTCTTCTCAAG...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACTGGTCATACTCTACTaGTGGTTTTGCCCGACTCTA +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKLVILY*WFCPTL
Trigger: TAGAGTCGGGCAAAACCAGCAGTAGAGTATGACCAG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCATGAGATATGCCTGCTaGAGTCGAAGTGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICMRYAC*SRSGPF
Trigger: GAAAGGTCCACTTCGACTCCAGCAGGCATATCTCAT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAACAAACCAATTAATATaGCTACGAAACAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRTNQLI*LRNRLW
Trigger: CCATAGCCTGTTTCGTAGCCATATTAATTGGTTTGT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGTACAAGATAATCTGTaGCAAAGTAGAAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRVQDNL*QSRKQA
Trigger: GGCTTGTTTTCTACTTTGCCACAGATTATCTTGTAC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGAAGAAGAAACATCCATaGGATTCTAACCGCAAATAT +
Preference number: 4 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSKKKHP*DSNRKY
Trigger: ATATTTGCGGTTAGAATCCCATGGATGTTTCTTCTT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAAAGAAGAAACATCCATaGGATTCTAACCGCAAATAT +
Preference number: 4 (lower is better)
Translates to: WPWEEMAITDGNECQCLRKKKHP*DSNRKY
Trigger: ATATTTGCGGTTAGAATCCCATGGATGTTTCTTCTT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGTGGTCAGGAAGACTTaGAAGGAAGCTGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICVVRKT*KEAAKV
Trigger: GACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCAC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGCAGATTGGCTTGGCTaGTCATACTCTACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKADWLG*SYSTAG
Trigger: ACCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CAA 72 bp CTGTCCCGTGTGAGTGAAGGCACATCCTTATGGAAATaGCTACTGTTCTTTCCAGTGACAATCTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: LSRVSEGTSLWK*LLFFPVTIYFS
Trigger: TGAAAAATAGATTGTCACTGGAAAGAACAGTAGCAATTTCCATAAGGATGTGCCTTCACTCACACGGGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGTTGTTGAGGAGTAAATaGGAGCTGGAAAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLLLRSK*ELEKAF
Trigger: AAACGCTTTTTCCAGCTCTCATTTACTCCTCAACAA...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACAACCACACCATTGTTaGGGAGTAAATGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKQPHHC*GVNESW
Trigger: CCAGCTCTCATTTACTCCTCAACAATGGTGTGGTTG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACCTATCATATCTCCTTaGCCTCGTCCCTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKPIISP*PRPSNL
Trigger: CAGATTTGAGGGACGAGGTCAAGGAGATATGATAGG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTACGTGTAGTTTAAGATaGAGAGTTCCGTTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFATCSLR*RVPFGL
Trigger: TAAACCAAACGGAACTCTTCATCTTAAACTACACGT...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAACTGACGAGAATAACCTaGAACTCCTCCTTGACATCA +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKLTRIT*NSSLTS
Trigger: TGATGTCAAGGAGGAGTTTCAGGTTATTCTCGTCAG...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTAGAAGAAATGTATCATaGAAGGTGCAACACATTTGG +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFARRNVS*KVQHIW
Trigger: CCAAATGTGTTGCACCTTTCATGATACATTTCTTCT...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGTCCTCAGACATCTGTaGATTCTGGAAGTAGGACAA +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICVLRHL*ILEVGQ
Trigger: TTGTCCTACTTCCAGAATGCACAGATGTCTGAGGAC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCATAATGAGATATGCCTaGTGGAGTCGAAGTGGACCT +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICIMRYA*WSRSGP
Trigger: AGGTCCACTTCGACTCCAGCAGGCATATCTCATTAT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGGCATACATCTCATTTaGTGTGGAAGAAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICGIHLI*CGRRSD
Trigger: GTCAGACCTTCTTCCACAGCAAATGAGATGTATGCC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGTACCAGGACAGAAAGTaGTTCAACAGCCATTTTACT +
Preference number: 4 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLYQDRK*FNSHFT
Trigger: AGTAAAATGGCTGTTGAAGCACTTTCTGTCCTGGTA...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGACCTTTCCAGTGAATaGAAATCATTCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDDLSSE*KSFPPH
Trigger: GTGTGGTGGGAATGATTTCCATTCACTGGAAAGGTC...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp AATTACTCTAGATTAGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCTGCTGGAGTCGAAGTaGACCTTTCCAGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: NYSRLGIPQECFQSQIAILLESK*TFPVNG
Trigger: TCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAG...AATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCTAATCTAGAGTAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAACCAGCATACGAAGTaGACCTTTCGGACACAAAAC +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKNQHTK*TFRTQN
Trigger: GTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATAAAGGTGATGGAGATTaGAAGAGCTGGCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: LYKIICGKVENKPKGDGDKGDGD*KSWQCF
Trigger: AAAGCATTGCCAGCTCTTCCAATCTCCATCACCTTT...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGGTTCAGACTGGCCTTaGGAAGAAATGGCAATCACA +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKGSDWP*EEMAIT
Trigger: TGTGATTGCCATTTCTTCCCAAGGCCAGTCTGAACC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AATTACTCTAGATTAGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTACCTCAGGTTCAGACTaGCCTTGGGAAGAAATGGCA +
Preference number: 4 (lower is better)
Translates to: NYSRLGIPQECFQSQIAITSGSD*PWEEMA
Trigger: TGCCATTTCTTCCCAAGGCCAGTCTGAACCTGAGGT...AATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCTAATCTAGAGTAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATTCCAAATTCAATGTTaGAAGGCAGGTGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKFQIQC*KAGEEV
Trigger: CACCTCCTCACCTGCCTTCCAACATTGAATTTGGAA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATCTCGGTATCTTCTGTaGATGGGGTATAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKSRYLL*MGYRLA
Trigger: AGCTAATCTATACCCCATTCACAGAAGATACCGAGA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp AATTACTCTAGATTAGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAACCACACCATTGTTaGGGAGTAAATGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NYSRLGIPQECFQSQIAIQPHHC*GVNESW
Trigger: CCAGCTCTCATTTACTCCTCAACAATGGTGTGGTTG...AATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCTAATCTAGAGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGTCCTCAGACATCTGTaGATTCTGGAAGTAGGACAA +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKVLRHL*ILEVGQ
Trigger: TTGTCCTACTTCCAGAATGCACAGATGTCTGAGGAC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAATTCCAGATCAGGAGTaGAACAGTAATGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKIPDQE*NSNVVH
Trigger: GTGGACTACATTACTGTTGCACTCCTGATCTGGAAT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCAATCATAATGAGATATaGCTGCTGGAGTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICNHNEI*LLESKW
Trigger: CCACTTCGACTCCAGCAGGCATATCTCATTATGATT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAGTGACTCCCTTTCTGTaGTTTCTGCATTATACTTGG +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKVTPFL*FLHYTW
Trigger: CCAAGTATAATGCAGAAAGCACAGAAAGGGAGTCAC...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGTGACTCCCTTTCTGTaGTTTCTGCATTATACTTGG +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICVTPFL*FLHYTW
Trigger: CCAAGTATAATGCAGAAAGCACAGAAAGGGAGTCAC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGATGTATCATGAAAGGTaGAACACATTTGGGATCCTT +
Preference number: 4 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLMYHER*NTFGIL
Trigger: AAGGATCCCAAATGTGTTGCACCTTTCATGATACAT...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR GCA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTTGTTTGGGCATCTATTaGAAAAGGAGGGTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: RDPSRMLPITNCYSGGFACLGIY*KRRVFK
Trigger: TTTAAAAACCCTCCTTTTGCAATAGATGCCCAAACA...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCAAAGGTGATGGAGATTaGAAGAGCTGGCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICKGDGD*KSWQCF
Trigger: AAAGCATTGCCAGCTCTTCCAATCTCCATCACCTTT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AATTACTCTAGATTAGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTTCCAATAGTGCAAGGTaGTCAGGAAGACTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NYSRLGIPQECFQSQIAISNSAR*SGRLGR
Trigger: CCTTCCAAGTCTTCCTGACCACCTTGCACTATTGGA...AATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCTAATCTAGAGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAATGTGGCTGAGATGTaGCTCAAACTTGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKNVAEM*LKLGER
Trigger: TCTTTCTCCAAGTTTGAGCCACATCTCAGCCACATT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAAATATACAAAGCCTTaGGGGTTGGGATCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKKYTKP*GLGSKA
Trigger: AGCCTTTGATCCCAACCCCCAAGGCTTTGTATATTT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATTTAGTATTGCTCAGGTaGTTGTCCTCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDLVLLR*LSSDIC
Trigger: ACAGATGTCTGAGGACAACCACCTGAGCAATACTAA...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAGAAAAAGGGATGGTATaGGAAGAAGGTGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKEKGMV*EEGDLS
Trigger: GGAAAGATCACCTTCTTCCCATACCATCCCTTTTTC...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
3UTR CAA 72 bp GAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTaGAGAAGAAGAATTGCCAAAGGCAATCTACATATT +
Preference number: 4 (lower is better)
Translates to: EMAITDGNECQC*RRRIAKGNLHI
Trigger: AATATGTAGATTGCCTTTGGCAATTCTTCTTCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
3UTR CAA 72 bp CAACAGCCATTTTACTCTTCTTTAATTCTACCGTCTTaGGGCATACATCTCATTTGCTGTGGAAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QQPFYSSLILPS*GIHLICCGRRS
Trigger: AGACCTTCTTCCACAGCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTTGTTGAGGAGTAAATaGGAGCTGGAAAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICLLRSK*ELEKAF
Trigger: AAACGCTTTTTCCAGCTCTCATTTACTCCTCAACAA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR TCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATTGTTGAGGAGTAAATaGGAGCTGGAAAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKLLRSK*ELEKAF
Trigger: AAACGCTTTTTCCAGCTCTCATTTACTCCTCAACAA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR GCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATAAGAGCATGATCACATaGTTGGCGCCATATTTCAAT +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDKSMIT*LAPYFN
Trigger: ATTGAAATATGGCGCCAAGCATGTGATCATGCTCTT...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATGGAGTAAATGAGAGCTaGAAAAAGCGTTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: LYKIICGKVENKPKGDGDGVNES*KKRFIS
Trigger: AGAAATGAAACGCTTTTTCCAGCTCTCATTTACTCC...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAAAAGGTGATGGAGATTaGAAGAGCTGGCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKKGDGD*KSWQCF
Trigger: AAAGCATTGCCAGCTCTTCCAATCTCCATCACCTTT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAGAGGGAATGAATCTTaGAAGAAGGGATTTCATGGA +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKRGNES*KKGFHG
Trigger: TCCATGAAATCCCTTCTTCCAAGATTCATTCCCTCT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
3UTR CAA 72 bp AGACAGTCCTGTACTTGCTACTATATGCAGCTGACTTaGAAACTGCCTAGTCTCAACAATTACGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: RQSCTCYYMQLT*KLPSLNNYVFQ
Trigger: TTGAAATACGTAATTGTTGAGACTAGGCAGTTTCAAAGTCAGCTGCATATAGTAGCAAGTACAGGACTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGAAAACAAAGCCTCTTaGGGTTCTTTCTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKENKAS*GSFFHV
Trigger: CACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR GCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACTTCCAATCACAAATTaGTATTCAGGTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKLPITN*YSGGFA
Trigger: AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAGGAGTAAATGAGAGCTaGAAAAAGCGTTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKGVNES*KKRFIS
Trigger: AGAAATGAAACGCTTTTTCCAGCTCTCATTTACTCC...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATACAAACCAATTAATATaGCTACGAAACAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDTNQLI*LRNRLW
Trigger: CCATAGCCTGTTTCGTAGCCATATTAATTGGTTTGT...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp AAAAGGCTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGTACAAGATAATCTGTaGCAAAGTAGAAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: KRLYKIICGKVENKPKGDVQDNL*QSRKQA
Trigger: GGCTTGTTTTCTACTTTGCCACAGATTATCTTGTAC...ATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAGCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CCA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTCAACCACCAGCTTTTaGCTATTTGTTCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: QPFYSSLILPSLGIHLICSTTSF*LFVQIL
Trigger: CAGAATTTGAACAAATAGCCAAAAGCTGGTGGTTGA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR TCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAACGTGTAGTTTAAGATaGAGAGTTCCGTTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKTCSLR*RVPFGL
Trigger: TAAACCAAACGGAACTCTTCATCTTAAACTACACGT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAACAAACCAATTAATATaGCTACGAAACAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKTNQLI*LRNRLW
Trigger: CCATAGCCTGTTTCGTAGCCATATTAATTGGTTTGT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CCA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATTTAAAGAAATAAGATaGGCTGTAGTCTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: EELPKAIYIFDLTQREGKFKEIR*AVVSAT
Trigger: AGTAGCTGAGACTACAGCCCATCTTATTTCTTTAAA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS CCA 90 bp CTTCAACGCGGCCATTCGGGGATGGCCAGGTGCCAGCCAGCTCAGTaGAGGGTCAGGGTGGCAGCCCCTGCCCTCTCCTCTTGGCACCCA +
Preference number: 5 (lower is better)
Translates to: LQRGHSGMARCQPAQ*RVRVAAPALSSWHP
Trigger: TGGGTGCCAAGAGGAGAGGGCAGGGGCTGCCACCCTGACCCTCCACTGAGCTGGCTGGCACCTGGCCATCCCCGAATGGCCGCGTTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 90 bp GGCCAGGTGCCAGCCAGCTCAGTGGAGGGTCAGGGTGGCAGCCCCTaGCCTCTCCTCTTGGCACCCAGGTTCTCTTCCAGTGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GQVPASSVEGQGGSP*PLLLAPRFSSSVQE
Trigger: TTCCTGGACACTGGAAGAGAACCTGGGTGCCAAGAGGAGAGGGCAGGGGCTGCCACCCTGACCCTCCACTGAGCTGGCTGGCACCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CCA 90 bp TCGAACAAGAGGCGTGCGGACTTCGCCCAGAATGCTCGTCGCCCCTaGACAAGGACACACCCGGGGCGTGAGGCGCGGAGTTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: SNKRRADFAQNARRP*TRTHPGREARSFTS
Trigger: ACTGGTGAAACTCCGCGCCTCACGCCCCGGGTGTGTCCTTGTCCAGGGGCGACGAGCATTCTGGGCGAAGTCCGCACGCCTCTTGTTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS GCA 90 bp GGCTCTATGCGGCCCCGCAGCAGCATCCAAGTGTGTTACAATCAATaGTCCTTCAACGCGGCCATTCGGGGATGGCCAGGTGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GSMRPRSSIQVCYNQ*SFNAAIRGWPGASQ
Trigger: CTGGCTGGCACCTGGCCATCCCCGAATGGCCGCGTTGAAGGAGCATTGATTGTAACACACTTGGATGCTGCTGCGGGGCCGCATAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CCA 90 bp CAAGTGTGTTACAATCAATGCTCCTTCAACGCGGCCATTCGGGGATaGCCAGGTGCCAGCCAGCTCAGTGGAGGGTCAGGGTGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QVCYNQCSFNAAIRG*PGASQLSGGSGWQP
Trigger: GGGCTGCCACCCTGACCCTCCACTGAGCTGGCTGGCACCTGGCCATCCCCGAATGGCCGCGTTGAAGGAGCATTGATTGTAACACACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 90 bp AAGGAGAAAGCATCAGACCCCGTCTTCCGCCTCGAACAAGAGGCGTaGGGACTTCGCCCAGAATGCTCGTCGCCCCTGGACAAGGACACA +
Preference number: 5 (lower is better)
Translates to: KEKASDPVFRLEQEA*GLRPECSSPLDKDT
Trigger: TGTGTCCTTGTCCAGGGGCGACGAGCATTCTGGGCGAAGTCCGCACGCCTCTTGTTCGAGGCGGAAGACGGGGTCTGATGCTTTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS CCA 90 bp CCAGCTCAGTGGAGGGTCAGGGTGGCAGCCCCTGCCCTCTCCTCTTaGCACCCAGGTTCTCTTCCAGTGTCCAGGAATAATCAGATCACA +
Preference number: 5 (lower is better)
Translates to: PAQWRVRVAAPALSS*HPGSLPVSRNNQIT
Trigger: TGTGATCTGATTATTCCTGGACACTGGAAGAGAACCTGGGTGCCAAGAGGAGAGGGCAGGGGCTGCCACCCTGACCCTCCACTGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp CGCTGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTGGTTCTCCTTCTGCCACAGCCCGATGACAGCTTaGTTGGTACACTCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: RCWRPLLFPLGSWFSFCHSPMTA*LVHSGQ
Trigger: CTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCT...GTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGGCGGGAACCAGCCAGTaGCTCCTCTCTGGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILAGTSQ*LLSGRR
Trigger: GCGCCTGCCAGAGAGGAGCAACTGGCTGGTTCCCGC...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGCGGAGTTTCACCAGTaGCTCAAGCAGACCCAGCCC +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYAEFHQ*LKQTQP
Trigger: GGGCTGGGTCTGCTTGAGCAACTGGTGAAACTCCGC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS GCA 90 bp CGCCATCATCATTCTCTGCAACAGTGTCTTGTGACTCCCTTTCTGTaGCGTGGGCCTGCAGGCACCCTTTGGCATGAACAGCCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: RHHHSLQQCLVTPFL*RGPAGTLWHEQPGC
Trigger: GCACCCAGGCTGTTCATGCCAAAGGGTGCCTGCAGGCCCACGGCACAGAAAGGGAGTCACAAGACACTGTTGCAGAGAATGATGATGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS GCA 90 bp ATTAGGTCTTGTGGTTCTCCCAGTCTGCATGCTAATAAATTTGTATaGATACGCTTCCCCGCCGCCCCGCTGCCGCCGCGGCTCGTAGCT +
Preference number: 5 (lower is better)
Translates to: IRSCGSPSLHANKFV*IRFPAAPLPPRLVA
Trigger: AGCTACGAGCCGCGGCGGCAGCGGGGCGGCGGGGAAGCGTATGCATACAAATTTATTAGCATGCAGACTGGGAGAACCACAAGACCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554131.5
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGGACCGCAAAGGCTGTaGTCACTTGCAGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVGPQRL*SLAGSQ
Trigger: CTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS GCA 90 bp TGTCACTTGCAGGCTCCCAGATTAGGTCTTGTGGTTCTCCCAGTCTaGATGCTAATAAATTTGTATGCGCTTCCCCGCCGCCCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: CHLQAPRLGLVVLPV*MLINLYALPRRPAA
Trigger: GGCAGCGGGGCGGCGGGGAAGCGCATACAAATTTATTAGCATGCAGACTGGGAGAACCACAAGACCTAATCTGGGAGCCTGCAAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553447.6
CDS-3UTR CAA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAGGACCGCAAAGGCTGTaGTCACTTGCAGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVGPQRL*SLAGSQ
Trigger: CTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCC...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: RILLESSWTAARDSGVERRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CAA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATGGCAGCATTCAGAATaGAGTGCAGGGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PARILLESSWTAARDSGVWQHSE*SAGLSG
Trigger: GCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGCTGAGGTGGATTACTaGAGCCCAGGAGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYAEVDY*SPGVQV
Trigger: GACTTGAACTCCTGGGCTCAAGTAATCCACCTCAGC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCCCGATGACAGCTTTGTaGGTACACTCTGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAPMTAL*VHSGQP
Trigger: TGGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGG...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS GCA 90 bp GTTTACTCGGCCACCACACACTCAAACCCCTTGCAAGAGGCAGTGTaGAAGCGAGTGAGTGAGTGTGGGAATCAGAGCAAACGAATGCGG +
Preference number: 5 (lower is better)
Translates to: VYSATTHSNPLQEAV*KRVSECGNQSKRMR
Trigger: CCGCATTCGTTTGCTCTGATTCCCACACTCACTCACTCGCTTGCACACTGCCTCTTGCAAGGGGTTTGAGTGTGTGGTGGCCGAGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGT +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYKGCCH*QAPRLG
Trigger: ACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp CGCTGCTGGAGGCCCCTTCTCTTTCCCCTTGGCAGTTGGTTCTCCTTCTGCCACAGCATGATCACATGCTaGGCGCCATATTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: RCWRPLLFPLGSWFSFCHSMITC*APYFNV
Trigger: GACATTGAAATATGGCGCCAAGCATGTGATCATGCT...GTGGCAGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGGGCCTCCAGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATGGCAGCATTCAGAATaGAGTGCAGGGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVWQHSE*SAGLSG
Trigger: GCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp ATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACAGTCTCGGTATGGCAGCATTCAGAATaGAGTGCAGGGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: MMAAFRIECRALWPTVSVWQHSE*SAGLSG
Trigger: GCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCA...TACCGAGACTGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTACAGGGTCTTGCTACGTaGCCCAAGCTGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVQGLAT*PKLLVN
Trigger: GTTCACAAGCAGCTTGGGCAACGTAGCAAGACCCTG...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS GCA 90 bp TGTCACTTGCAGGCTCCCAGATTAGGTCTTGTGGTTCTCCCAGTCTaGATGCTAATAAATTTGTATGCATACGCTTCCCCGCCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: CHLQAPRLGLVVLPV*MLINLYAYASPPPR
Trigger: GCGGGGCGGCGGGGAAGCGTATGCATACAAATTTATTAGCATGCAGACTGGGAGAACCACAAGACCTAATCTGGGAGCCTGCAAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554131.5
CDS-3UTR CAA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGGGACCGCAAAGGCTGTaGTCACTTGCAGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLGPQRL*SLAGSQ
Trigger: CTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCC...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGGACCGCAAAGGCTGTaGTCACTTGCAGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSGPQRL*SLAGSQ
Trigger: CTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGTATTGCTCAGGTGGTaGTCCTCAGACATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: PARILLESSWTAARDSGVVLLRW*SSDICA
Trigger: TGCACAGATGTCTGAGGACAACCACCTGAGCAATAC...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CAA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTATGGCTACGTACAGTATaGCTCAGGTGGTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PARILLESSWTAARDSGVWLRTV*LRWLSS
Trigger: TGAGGACAACCACCTGAGCAATACTGTACGTAGCCA...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553855.5
CDS-3UTR CAA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTTGGCAGCATTCAGAATaGAGTGCAGGGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGWQHSE*SAGLSG
Trigger: GCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCA...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGAAGTCTCCACTGGCTGTaGCTGAGGCTTTACCAACCA +
Preference number: 5 (lower is better)
Translates to: RILLESSWTAARDSGVERSLHWL*LRLYQP
Trigger: TGGTTGGTAAAGCCTCAGCAACAGCCAGTGGAGACT...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCCGGGAATCTTGACTTaGTTAGATGTGGACACAGGA +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYPGILT*LDVDTG
Trigger: TCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp TCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTCCATTAGATAATGGCCATAATCTCTGTATTTaGGGAGGCCAAAGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SCSTTCRELPWGRPLDNGHNLCI*GGQSGR
Trigger: CCTCCCACTTTGGCCTCCCAAAATACAGAGATTATG...GCCATTATCTAATGGACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS GCA 90 bp GCCTGGCCAATATGGCGAGAACTCGTCTCTGGCTACGTACAGTATTaGTCAGGTGGTTGTCCTCAGACATCTGTGCATTCTGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: AWPIWRELVSGYVQY*SGGCPQTSVHSGSR
Trigger: CCTACTTCCAGAATGCACAGATGTCTGAGGACAACCACCTGAGCAATACTGTACGTAGCCAGAGACGAGTTCTCGCCATATTGGCCAGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556011.5
CDS CCA 90 bp TGGAAGTGGTTCTCAGCAGAATGGGGAGTTGAAAAAGGGATGGTATaGGAAGAAGGTGATCTTTCCCTGAAGCCAGGCCATCTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: WKWFSAEWGVEKGMV*EEGDLSLKPGHLRL
Trigger: CAGCCGGAGATGGCCTGGCTTCAGGGAAAGATCACCTTCTTCCCATACCATCCCTTTTTCAACTCCCCATTCTGCTGAGAACCACTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGT +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVKGCCH*QAPRLG
Trigger: ACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTT...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp GGCTCCGTCTGTCGTTGTGCTCCTGCCGTTCTCTATTGTCATTATGAAATATCTGGACCGCAAAGGCTGTaGTCACTTGCAGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GSVCRCAPAVLYCHYEISGPQRL*SLAGSQ
Trigger: CTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCC...AGATATTTCATAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAGTATTGCTCAGGTGGTaGTCCTCAGACATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVVLLRW*SSDICA
Trigger: TGCACAGATGTCTGAGGACAACCACCTGAGCAATAC...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATGGCTACGTACAGTATaGCTCAGGTGGTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVWLRTV*LRWLSS
Trigger: TGAGGACAACCACCTGAGCAATACTGTACGTAGCCA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCTCCTGCCGTTCTCTATaGTCATTCTGGCTACGTACA +
Preference number: 5 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPASCRSL*SFWLRT
Trigger: TGTACGTAGCCAGAATGACAATAGAGAACGGCAGGA...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATAGCATGATCACATGCTaGGCGCCATATTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSMITC*APYFNV
Trigger: GACATTGAAATATGGCGCCAAGCATGTGATCATGCT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGATTTGGATACTCTCCTTaGAGCTTCCGGGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RILLESSWTAARDSGVERFGYSP*SFRVSF
Trigger: GAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAAA...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CAA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTACCCTTCTCTTTCCCCTaGGCAGTTGGTTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVPFSFP*AVGSPS
Trigger: AGAAGGAGAACCAACTGCCAAGGGGAAAGAGAAGGG...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCACAAAGCCTTGGGGGTaGGGATCAAAGGCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSTKPWG*GSKASR
Trigger: GCGGGAAGCCTTTGATCCCAACCCCCAAGGCTTTGT...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS GCA 90 bp CCATTAGATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTGTCATTCTGGCTACGTACAGTATTG +
Preference number: 5 (lower is better)
Translates to: PLDNGSGWPRLRLSL*SCRSLLSFWLRTVL
Trigger: CAATACTGTACGTAGCCAGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000394157.7
ENST00000553855.5
ENST00000554131.5
ENST00000555254.5
ENST00000557293.5
ENST00000557511.5
CDS GCA 90 bp CCATTAGATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTGTCATTAGTATTGCTCAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: PLDNGSGWPRLRLSL*SCRSLLSLVLLRWL
Trigger: CAACCACCTGAGCAATACTAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357710.8
ENST00000394164.5
ENST00000553599.5
ENST00000553719.5
ENST00000555386.5
ENST00000556066.1
ENST00000556533.5
ENST00000556864.5
ENST00000556951.5
ENST00000557037.5
ENST00000557356.5
ENST00000560005.6
CDS-3UTR CAA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGT +
Preference number: 5 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVKGCCH*QAPRLG
Trigger: ACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTT...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTAGTATTGCTCAGGTGGTaGTCCTCAGACATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVVLLRW*SSDICA
Trigger: TGCACAGATGTCTGAGGACAACCACCTGAGCAATAC...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp ACACTGATCATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACAGTATTGCTCAGGTGGTaGTCCTCAGACATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: TLIMMAAFRIECRALWPTVLLRW*SSDICA
Trigger: TGCACAGATGTCTGAGGACAACCACCTGAGCAATAC...TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGATCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp CCCTCAAATCTGGTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGGCTACGTACAGTATaGCTCAGGTGGTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PSNLVVSAPRDTVHCDEVWLRTV*LRWLSS
Trigger: TGAGGACAACCACCTGAGCAATACTGTACGTAGCCA...TACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTACCAGATTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTATCCTGCCGTTCTCTATaGTCATTCTGGCTACGTACA +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVSCRSL*SFWLRT
Trigger: TGTACGTAGCCAGAATGACAATAGAGAACGGCAGGA...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGATCCTGCCGTTCTCTATaGTCATTCTGGCTACGTACA +
Preference number: 5 (lower is better)
Translates to: RILLESSWTAARDSGVERSCRSL*SFWLRT
Trigger: TGTACGTAGCCAGAATGACAATAGAGAACGGCAGGA...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553855.5
CDS-3UTR CAA 90 bp CCAGCGAGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAAGCATGATCACATGCTaGGCGCCATATTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: PARILLESSWTAARDSGVSMITC*APYFNV
Trigger: GACATTGAAATATGGCGCCAAGCATGTGATCATGCT...TACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCTCGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS-3UTR CAA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTTTTGGATACTCTCCTTaGAGCTTCCGGGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGFGYSP*SFRVSF
Trigger: GAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAAA...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGGTCCAGCCGGGAATCTaGACTTTGTTAGATGTGGAC +
Preference number: 5 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILVQPGI*TLLDVD
Trigger: GTCCACATCTAACAAAGTCAAGATTCCCGGCTGGAC...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp ATCATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACAGTCTCGAGAACTCGTCTAGTATaGCTCAGGTGGTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: IMMAAFRIECRALWPTVSRTRLV*LRWLSS
Trigger: TGAGGACAACCACCTGAGCAATACTAGACGAGTTCT...CGAGACTGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATCAGGTAACTCTGTCATaGGAGCAACTGTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYQVTLS*EQLYRN
Trigger: ATTTCTATACAGTTGCTCCAATGACAGAGTTACCTG...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp TCTGTCGTTGTGCTCCTGCCGTTCTCTATTGTCATTATGAAATATCTAGCCAGCAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: SVVVLLPFSIVIMKYLASRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...GCTGGCTAGATATTTCATAATGACAATAGAGAACGGCAGGAGCACAACGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAAGCATGATCACATGCTaGGCGCCATATTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVSMITC*APYFNV
Trigger: GACATTGAAATATGGCGCCAAGCATGTGATCATGCT...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp GTGTTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGTCTCCACTGGCTGTaGCTGAGGCTTTACCAACCA +
Preference number: 5 (lower is better)
Translates to: VFPVRGEDYADDHMQMSLSLHWL*LRLYQP
Trigger: TGGTTGGTAAAGCCTCAGCAACAGCCAGTGGAGACT...CAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAAGTCTCCACTGGCTGTaGCTGAGGCTTTACCAACCA +
Preference number: 5 (lower is better)
Translates to: WPWEEMAITDGNECQCLRSLHWL*LRLYQP
Trigger: TGGTTGGTAAAGCCTCAGCAACAGCCAGTGGAGACT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTACTTCACCTAACCTCTaGGTAACGGTAGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGTSPNL*VTVVLR
Trigger: TCTCAGGACTACCGTTACCAAGAGGTTAGGTGAAGT...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp CACAGCAACTTCCGGGCCTATCATATCTCCTTGACCTCGTCCCTCAAATCTGGTTCACACAAAGGTACATaGAGAGGAAAGGTAACGCGG +
Preference number: 5 (lower is better)
Translates to: HSNFRAYHISLTSSLKSGSHKGT*RGKVTR
Trigger: CCGCGTTACCTTTCCTCTCAATGTACCTTTGTGTGA...ACCAGATTTGAGGGACGAGGTCAAGGAGATATGATAGGCCCGGAAGTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATAGTATATGCAGAAGATaGTATTGCACGATGGAAGTG +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYSICRR*YCTMEV
Trigger: CACTTCCATCGTGCAATACAATCTTCTGCATATACT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATGATCACATGAACAGATaGAAGGGTAGTATATGCAGA +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYDHMNR*KGSICR
Trigger: TCTGCATATACTACCCTTCAATCTGTTCATGTGATC...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 90 bp CCATTAGATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTGTCATTCAATAGGAATTTCAAGCTC +
Preference number: 5 (lower is better)
Translates to: PLDNGSGWPRLRLSL*SCRSLLSFNRNFKL
Trigger: GAGCTTGAAATTCCTATTGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGT +
Preference number: 5 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSKGCCH*QAPRLG
Trigger: ACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTT...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp TCATCTTCTTCCTCATCTTGCTCCACCACCTGCCGGGAGTTACCCTGGGGTCGTAGAAAACAAAGCCTCTaGAGGTTCTTTCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: SSSSSSCSTTCRELPWGRRKQSL*RFFLSC
Trigger: ACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTCT...ACGACCCCAGGGTAACTCCCGGCAGGTGGTGGAGCAAGATGAGGAAGAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGGTCCAGCCGGGAATCTaGACTTTGTTAGATGTGGAC +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSVQPGI*TLLDVD
Trigger: GTCCACATCTAACAAAGTCAAGATTCCCGGCTGGAC...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCACTCGCACACTACTCTaGAAGTTAGGTTCTTATAAG +
Preference number: 5 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPATRTLL*KLGSYK
Trigger: CTTATAAGAACCTAACTTCAAGAGTAGTGTGCGAGT...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GTGACCACGCGTCAAGCTGCTGATGGGGCACAGCAACTTCCGGGCCTATCATATATAAACATCATCTGTTaGGGCATCTATTGCAAAAGG +
Preference number: 5 (lower is better)
Translates to: VTTRQAADGAQQLPGLSYINIIC*GIYCKR
Trigger: CCTTTTGCAATAGATGCCCAAACAGATGATGTTTAT...ATATGATAGGCCCGGAAGTTGCTGTGCCCCATCAGCAGCTTGACGCGTGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp AGGATACTGCTGGAAAGTTCCTGGACAGCAGCTCGTGACTCAGGTGTAGAGCGACTATTGTCATTAGTATaGCTCAGGTGGTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RILLESSWTAARDSGVERLLSLV*LRWLSS
Trigger: TGAGGACAACCACCTGAGCAATACTAATGACAATAG...TCGCTCTACACCTGAGTCACGAGCTGCTGTCCAGGAACTTTCCAGCAGTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCAGCAGAATGGGGAGTaGAAAAAGGGATGGTATGGG +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSQQNGE*KKGWYG
Trigger: CCCATACCATCCCTTTTTCAACTCCCCATTCTGCTG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAACACACTCAAACCCCTaGCAAGAGGCAGTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRTHSNP*QEAVCK
Trigger: CTTGCACACTGCCTCTTGCAAGGGGTTTGAGTGTGT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTACAGGTAACTCTGTCATaGGAGCAACTGTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVQVTLS*EQLYRN
Trigger: ATTTCTATACAGTTGCTCCAATGACAGAGTTACCTG...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: LYKIICGKVENKPKGDGDRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCCGGGAATCTTGACTTaGTTAGATGTGGACACAGGA +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSPGILT*LDVDTG
Trigger: TCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAGGTGGTCAGGAAGACTaGGAAGGAAGCTGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRGGQED*EGSCKS
Trigger: ACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACC...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGACTTCACCTAACCTCTaGGTAACGGTAGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSTSPNL*VTVVLR
Trigger: TCTCAGGACTACCGTTACCAAGAGGTTAGGTGAAGT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp ATGTCTCTGAGCTGTGAGCCCGATGACAGCTTTGTTGGTACACTCTGGCCAGCCATCTACATATTTGACTaGACTCAAAGAGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: MSLSCEPDDSFVGTLWPAIYIFD*TQREGK
Trigger: TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGAT...GGCTGGCCAGAGTGTACCAACAAAGCTGTCATCGGGCTCACAGCTCAGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGCTATTGTCATTAGTATaGCTCAGGTGGTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILLLSLV*LRWLSS
Trigger: TGAGGACAACCACCTGAGCAATACTAATGACAATAG...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCGTCAGCTGCTTATATaGTTCTCCCAGCTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSRQLLI*FSQLLK
Trigger: TTTCAGCAGCTGGGAGAACAATATAAGCAGCTGACG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp CCTGCCTCAGCCTCTGAGCCTGGCATTACACATGCACCTGGCTTCCTTTTTGTAAGAAAACAAAGCCTCTaGAGGTTCTTTCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: PASASEPGITHAPGFLFVRKQSL*RFFLSC
Trigger: ACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTCT...TACAAAAAGGAAGCCAGGTGCATGTGTAATGCCAGGCTCAGAGGCTGAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS-3UTR CAA 90 bp ACACTGATCATGATGGCAGCATTCAGAATTGAGTGCAGGGCTCTCTGGCCCACACAGGTAACTCTGTCATaGGAGCAACTGTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: TLIMMAAFRIECRALWPTQVTLS*EQLYRN
Trigger: ATTTCTATACAGTTGCTCCAATGACAGAGTTACCTG...TGTGGGCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCATCATGATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: QPFYSSLILPSLGIHLICRLRLS*CSCRSL
Trigger: TAGAGAACGGCAGGAGCACAACGACAGACGGAGCCT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAAGCATGATCACATGCTaGGCGCCATATTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: WPWEEMAITDGNECQCLRSMITC*APYFNV
Trigger: GACATTGAAATATGGCGCCAAGCATGTGATCATGCT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAACTTCACCTAACCTCTaGGTAACGGTAGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRTSPNL*VTVVLR
Trigger: TCTCAGGACTACCGTTACCAAGAGGTTAGGTGAAGT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGTTAATTCTACCGTCTTaGGGCATACATCTCATTTGC +
Preference number: 5 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILLILPS*GIHLIC
Trigger: GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAA...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp TTTCCCGTTAGAGGAGAGGACTATGCAGATGATCACATGCAGATGTCTCTGAGCGCTTCCAATCACAAATaGCTATTCAGGTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: FPVRGEDYADDHMQMSLSASNHK*LFRWLC
Trigger: GCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGC...GCTCAGAGACATCTGCATGTGATCATCTGCATAGTCCTCTCCTCTAACGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGTCCTGCCGTTCTCTATaGTCATTAGTATTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSSCRSL*SLVLLR
Trigger: CCTGAGCAATACTAATGACAATAGAGAACGGCAGGA...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357710.8
ENST00000394164.5
CDS GCA 90 bp CTTGGAATTTTTGGATACTCTCCTTTGAGCTTCCGGGTCTCCTTCTaGCATATTCACCAACCACACCATTGTTGCTGTTGGGAAAGACAA +
Preference number: 5 (lower is better)
Translates to: LGIFGYSPLSFRVSF*HIHQPHHCCCWERQ
Trigger: TTGTCTTTCCCAACAGCAACAATGGTGTGGTTGGTGAATATGGCAGAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAAAAATTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555867.1
CDS-3UTR CAA 90 bp CACCTGTATTTATACAGAACCACCAGGAGGATAGTCATGACAACAATGACACTGAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGT +
Preference number: 5 (lower is better)
Translates to: HLYLYRTTRRIVMTTMTLKGCCH*QAPRLG
Trigger: ACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTT...CAGTGTCATTGTTGTCATGACTATCCTCCTGGTGGTTCTGTATAAATACAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp AAGGTGGTCAGGAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGAGAAAACAAAGCCTCTaGAGGTTCTTTCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: KVVRKTWKEAAKVQPGILRKQSL*RFFLSC
Trigger: ACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTCT...CAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATGGCAGCATTCAGAATaGAGTGCAGGGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: EELPKAIYIFDLTQREGKWQHSE*SAGLSG
Trigger: GCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGTTTGGATACTCTCCTTaGAGCTTCCGGGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLFGYSP*SFRVSF
Trigger: GAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAAA...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp AGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTCAGGTGGCTTTGCTCCGGGAATCTTGACTTaGTTAGATGTGGACACAGGA +
Preference number: 5 (lower is better)
Translates to: RDPSRMLPITNCYSGGFAPGILT*LDVDTG
Trigger: TCCTGTGTCCACATCTAACAAAGTCAAGATTCCCGG...AGCAAAGCCACCTGAATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGTTAATTCTACCGTCTTaGGGCATACATCTCATTTGC +
Preference number: 5 (lower is better)
Translates to: QLCWYTLASHFTTHYEELLILPS*GIHLIC
Trigger: GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAA...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGATATATGCAGCTGACTTaGAAACTGCCTAGTCTCAAC +
Preference number: 5 (lower is better)
Translates to: WPWEEMAITDGNECQCLRYMQLT*KLPSLN
Trigger: GTTGAGACTAGGCAGTTTCAAAGTCAGCTGCATATA...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS TCA 90 bp ATCATAATGAGATATGCCTGCTGGAGTCGAAGTGGACCTTTCCAGTaGATGGAAATCATTCCCACCACACCAAAATTCCAGATCAGGAGT +
Preference number: 5 (lower is better)
Translates to: IIMRYACWSRSGPFQ*MEIIPTTPKFQIRS
Trigger: ACTCCTGATCTGGAATTTTGGTGTGGTGGGAATGATTTCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAGGCATATCTCATTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
ENST00000553855.5
ENST00000555386.5
ENST00000557511.5
CDS GCA 90 bp CCAACCATAAGAAGAACAGGGTGGAAAGCAAAGATCTGTGTCTCATaGTCACCTTATAGCACCTGTATTTATACAGAACCACCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: PTIRRTGWKAKICVS*SPYSTCIYTEPPGG
Trigger: TCCTCCTGGTGGTTCTGTATAAATACAGGTGCTATAAGGTGAGCATGAGACACAGATCTTTGCTTTCCACCCTGTTCTTCTTATGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394157.7
CDS CCA 90 bp CATGAGGGCACTAATCATAATGAGATATGCCTGCTGGAGTCGAAGTaGACCTTTCCAGTGAATGGAAATCATTCCCACCACACCAAAATT +
Preference number: 5 (lower is better)
Translates to: HEGTNHNEICLLESK*TFPVNGNHSHHTKI
Trigger: AATTTTGGTGTGGTGGGAATGATTTCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAGGCATATCTCATTATGATTAGTGCCCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
ENST00000553855.5
ENST00000555386.5
ENST00000557511.5
CDS CCA 90 bp TATGCAGAAGATTGTATTGCACGATGGAAGTGGTTCTCAGCAGAATaGGGAGTTGAAAAAGGGATGGTATGGGAAGAAGGTGATCTTTCC +
Preference number: 5 (lower is better)
Translates to: YAEDCIARWKWFSAE*GVEKGMVWEEGDLS
Trigger: GGAAAGATCACCTTCTTCCCATACCATCCCTTTTTCAACTCCCCATTCTGCTGAGAACCACTTCCATCGTGCAATACAATCTTCTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGCAGGTAACTCTGTCATaGGAGCAACTGTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSQVTLS*EQLYRN
Trigger: ATTTCTATACAGTTGCTCCAATGACAGAGTTACCTG...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATGTATTGCTCAGGTGGTaGTCCTCAGACATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: LYKIICGKVENKPKGDGDVLLRW*SSDICA
Trigger: TGCACAGATGTCTGAGGACAACCACCTGAGCAATAC...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CAA 90 bp TCTGTCGTTGTGCTCCTGCCGTTCTCTATTGTCATTATGAAATATCTAGCCAGCAGCATGATCACATGCTaGGCGCCATATTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: SVVVLLPFSIVIMKYLASSMITC*APYFNV
Trigger: GACATTGAAATATGGCGCCAAGCATGTGATCATGCT...GCTGGCTAGATATTTCATAATGACAATAGAGAACGGCAGGAGCACAACGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559361.5
CDS-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAATGGCAGCATTCAGAATaGAGTGCAGGGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKWQHSE*SAGLSG
Trigger: GCCAGAGAGCCCTGCACTCAATTCTGAATGCTGCCA...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCAGTCTCCACTGGCTGTaGCTGAGGCTTTACCAACCA +
Preference number: 5 (lower is better)
Translates to: QPFYSSLILPSLGIHLICSLHWL*LRLYQP
Trigger: TGGTTGGTAAAGCCTCAGCAACAGCCAGTGGAGACT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGATTAATTCTACCGTCTTaGGGCATACATCTCATTTGC +
Preference number: 5 (lower is better)
Translates to: WPWEEMAITDGNECQCLRLILPS*GIHLIC
Trigger: GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAA...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGTTAATTCTACCGTCTTaGGGCATACATCTCATTTGC +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSLILPS*GIHLIC
Trigger: GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAA...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp TGGCCTTGGGAAGAAATGGCAATCACAGACGGTAATGAGTGTCAGTGCTTGAGAACATCCTTATGGAAATaGCTACTGTTCTTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: WPWEEMAITDGNECQCLRTSLWK*LLFFPV
Trigger: CACTGGAAAGAACAGTAGCAATTTCCATAAGGATGT...TCTCAAGCACTGACACTCATTACCGTCTGTGATTGCCATTTCTTCCCAAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GTCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGCAAATATACAAAGCCTaGGGGGTTGGGATCAAAGGC +
Preference number: 5 (lower is better)
Translates to: VFHLFIKQIGLAGHTLLLQIYKA*GVGIKG
Trigger: GCCTTTGATCCCAACCCCCAAGGCTTTGTATATTTG...CAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp CAGCTTTGTTGGTACACTCTGGCCAGCCATTTCACAACGCACTATGAAGAGCTGTTATCTTATTCATCTTaGCATCCTCAGACTCCAGAA +
Preference number: 5 (lower is better)
Translates to: QLCWYTLASHFTTHYEELLSYSS*HPQTPE
Trigger: TTCTGGAGTCTGAGGATGCAAAGATGAATAAGATAA...CAGCTCTTCATAGTGCGTTGTGAAATGGCTGGCCAGAGTGTACCAACAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGACTGGATAATTCCCTaGACCCCCTCATGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKDWIIP*TPSWLG
Trigger: TCCGAGCCATGAGGGGGTCAAGGGAATTATCCAGTC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 90 bp GTTGGGAAAGACAAAATTCCAGGTAAGCACTGGACACACAAAGTATaGATAGACAACAACAAGCCATCATTTCTCCACACAAATCGCCAG +
Preference number: 5 (lower is better)
Translates to: VGKDKIPGKHWTHKV*IDNNKPSFLHTNRQ
Trigger: CTGGCGATTTGTGTGGAGAAATGATGGCTTGTTGTTGTCTATGCATACTTTGTGTGTCCAGTGCTTACCTGGAATTTTGTCTTTCCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555867.1
CDS-3UTR CAA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGACAGGTAACTCTGTCATaGGAGCAACTGTATAGAAAT +
Preference number: 5 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRQVTLS*EQLYRN
Trigger: ATTTCTATACAGTTGCTCCAATGACAGAGTTACCTG...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCTTTGGATACTCTCCTTaGAGCTTCCGGGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QPFYSSLILPSLGIHLICFGYSP*SFRVSF
Trigger: GAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAAA...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAAGTCTCCACTGGCTGTaGCTGAGGCTTTACCAACCA +
Preference number: 5 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKSLHWL*LRLYQP
Trigger: TGGTTGGTAAAGCCTCAGCAACAGCCAGTGGAGACT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCGTCCAGCCGGGAATCTaGACTTTGTTAGATGTGGAC +
Preference number: 5 (lower is better)
Translates to: QPFYSSLILPSLGIHLICVQPGI*TLLDVD
Trigger: GTCCACATCTAACAAAGTCAAGATTCCCGGCTGGAC...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GTAGTTTCTGCACCGAGGGACACAGTCCACTGCGATGAAGTATGTTCAAAATCGATCTACATATTTGACTaGACTCAAAGAGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VVSAPRDTVHCDEVCSKSIYIFD*TQREGK
Trigger: TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGAT...CGATTTTGAACATACTTCATCGCAGTGGACTGTGTCCCTCGGTGCAGAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAACTCTACTGCTGGTTTaGCCCGACTCTATAACCACC +
Preference number: 5 (lower is better)
Translates to: EELPKAIYIFDLTQREGKTLLLV*PDSITT
Trigger: GGTGGTTATAGAGTCGGGCAAAACCAGCAGTAGAGT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGATTAAGCAGATTGGCTaGGCTGGTCATACTCTACTG +
Preference number: 5 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWIKQIG*AGHTLL
Trigger: CAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAAT...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAACCGACAATCAGCTGCTaGTATTCCCAACACACAGCC +
Preference number: 5 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKPTISC*YSQHTA
Trigger: GGCTGTGTGTTGGGAATACAAGCAGCTGATTGTCGG...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CCA 90 bp CACACCATTGTTGCTGTTGGGAAAGACAAAATTCCAGGTAAGCACTaGACACACAAAGTATGCATAGACAACAACAAGCCATCATTTCTC +
Preference number: 5 (lower is better)
Translates to: HTIVAVGKDKIPGKH*THKVCIDNNKPSFL
Trigger: GAGAAATGATGGCTTGTTGTTGTCTATGCATACTTTGTGTGTCCAGTGCTTACCTGGAATTTTGTCTTTCCCAACAGCAACAATGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555867.1
CDS-3UTR CAA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCGTATTGCTCAGGTGGTaGTCCTCAGACATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: FGILTQINYSRLGIPQECVLLRW*SSDICA
Trigger: TGCACAGATGTCTGAGGACAACCACCTGAGCAATAC...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGTATTGCTCAGGTGGTaGTCCTCAGACATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKVLLRW*SSDICA
Trigger: TGCACAGATGTCTGAGGACAACCACCTGAGCAATAC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATAGCATGATCACATGCTaGGCGCCATATTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: LYKIICGKVENKPKGDGDSMITC*APYFNV
Trigger: GACATTGAAATATGGCGCCAAGCATGTGATCATGCT...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS-3UTR CAA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCGGTGGTCAGGAAGACTaGGAAGGAAGCTGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: FGILTQINYSRLGIPQECGGQED*EGSCKS
Trigger: ACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACC...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAGGTGGTCAGGAAGACTaGGAAGGAAGCTGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKGGQED*EGSCKS
Trigger: ACTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACC...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GAAGACTTGGAAGGAAGCTGCAAAAGTCCAGCCGGGAATCTTGACTTTGTTAGAATCTACATATTTGACTaGACTCAAAGAGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: EDLEGSCKSPAGNLDFVRIYIFD*TQREGK
Trigger: TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGAT...TCTAACAAAGTCAAGATTCCCGGCTGGACTTTTGCAGCTTCCTTCCAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp CTGTACAAGATAATCTGTGGCAAAGTAGAAAACAAGCCCAAAGGTGATGGAGATTCCTGCCGTTCTCTATaGTCATTAGTATTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LYKIICGKVENKPKGDGDSCRSL*SLVLLR
Trigger: CCTGAGCAATACTAATGACAATAGAGAACGGCAGGA...ATCTCCATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555386.5
CDS GCA 90 bp GTGAATGGAAATCATTCCCACCACACCAAAATTCCAGATCAGGAGTaGAACAGTAATGTAGTCCACAGCAACGTTATAGGTTTTAAACAC +
Preference number: 5 (lower is better)
Translates to: VNGNHSHHTKIPDQE*NSNVVHSNVIGFKH
Trigger: GTGTTTAAAACCTATAACGTTGCTGTGGACTACATTACTGTTGCACTCCTGATCTGGAATTTTGGTGTGGTGGGAATGATTTCCATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
ENST00000553855.5
ENST00000555386.5
ENST00000557511.5
CDS-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAACTTCACCTAACCTCTaGGTAACGGTAGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKTSPNL*VTVVLR
Trigger: TCTCAGGACTACCGTTACCAAGAGGTTAGGTGAAGT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
CDS-3UTR CAA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAGGCTTTCCCCAACTCTaGCTTTGTGTTGATACAACT +
Preference number: 5 (lower is better)
Translates to: EELPKAIYIFDLTQREGKGFPQL*LCVDTT
Trigger: AGTTGTATCAACACAAAGCAAGAGTTGGGGAAAGCC...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp TTTGGGATCCTTACACAAATAAATTACTCTAGATTAGGGATCCCTCAAGAATGCCTGTGGGAGACAGCTTaGATGTTCAAGAAAGGGGTT +
Preference number: 5 (lower is better)
Translates to: FGILTQINYSRLGIPQECLWETA*MFKKGV
Trigger: AACCCCTTTCTTGAACATCAAAGCTGTCTCCCACAG...GCATTCTTGAGGGATCCCTAATCTAGAGTAATTTATTTGTGTAAGGATCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp TCTTCCATCTTTTTATTAAGCAGATTGGCTTGGCTGGTCATACTCTACTGCTGGATCAACCACCAGCTTTaGGCTATTTGTTCAAATTCT +
Preference number: 5 (lower is better)
Translates to: SSIFLLSRLAWLVILYCWINHQL*AICSNS
Trigger: AGAATTTGAACAAATAGCCAAAAGCTGGTGGTTGAT...CCAGCAGTAGAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAAGATGGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp GCAAGTGAGCGTACAAGTATGTCTACAAATTCAGAATTTGGTGGAAAATCCAAAAAGACAGTCCTGTACTaGCTACTATATGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: ASERTSMSTNSEFGGKSKKTVLY*LLYAAD
Trigger: GTCAGCTGCATATAGTAGCAAGTACAGGACTGTCTT...TTTGGATTTTCCACCAAATTCTGAATTTGTAGACATACTTGTACGCTCACTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS-3UTR CAA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCCTATTGTCATTAGTATaGCTCAGGTGGTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: QPFYSSLILPSLGIHLICLLSLV*LRWLSS
Trigger: TGAGGACAACCACCTGAGCAATACTAATGACAATAG...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAATCCTGCCGTTCTCTATaGTCATTCAATAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: EELPKAIYIFDLTQREGKSCRSL*SFNRNF
Trigger: GAAATTCCTATTGAATGACAATAGAGAACGGCAGGA...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS-3UTR CAA 90 bp GAAGAATTGCCAAAGGCAATCTACATATTTGACTTGACTCAAAGAGAGGGGAAAAGAAAACAAAGCCTCTaGAGGTTCTTTCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: EELPKAIYIFDLTQREGKRKQSL*RFFLSC
Trigger: ACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTCT...TTTCCCCTCTCTTTGAGTCAAGTCAAATATGTAGATTGCCTTTGGCAATTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp CAGCCATTTTACTCTTCTTTAATTCTACCGTCTTTGGGCATACATCTCATTTGCAGAAAACAAAGCCTCTaGAGGTTCTTTCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: QPFYSSLILPSLGIHLICRKQSL*RFFLSC
Trigger: ACATGAAAGAAAGAACCTCAAGAGGCTTTGTTTTCT...GCAAATGAGATGTATGCCCAAAGACGGTAGAATTAAAGAAGAGTAAAATGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
CDS-3UTR CAA 90 bp AATTACTCTAGATTAGGGATCCCTCAAGAATGCTTCCAATCACAAATTGCTATTTTTTTATTAAGCAGATaGGCTTGGCTGGTCATACTC +
Preference number: 5 (lower is better)
Translates to: NYSRLGIPQECFQSQIAIFLLSR*AWLVIL
Trigger: GAGTATGACCAGCCAAGCCAATCTGCTTAATAAAAA...AATAGCAATTTGTGATTGGAAGCATTCTTGAGGGATCCCTAATCTAGAGTAATT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000324501.10
CDS CCA 72 bp AGGCGTGCGGACTTCGCCCAGAATGCTCGTCGCCCCTaGACAAGGACACACCCGGGGCGTGAGGCGCGGAGT +
Preference number: 6 (lower is better)
Translates to: RRADFAQNARRP*TRTHPGREARS
Trigger: ACTCCGCGCCTCACGCCCCGGGTGTGTCCTTGTCCAGGGGCGACGAGCATTCTGGGCGAAGTCCGCACGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS GCA 72 bp ATGCTCCTTCAACGCGGCCATTCGGGGATGGCCAGGTaGCAGCCAGCTCAGTGGAGGGTCAGGGTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: MLLQRGHSGMAR*QPAQWRVRVAA
Trigger: GGCTGCCACCCTGACCCTCCACTGAGCTGGCTGGCACCTGGCCATCCCCGAATGGCCGCGTTGAAGGAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 72 bp CCAGCCAGCTCAGTGGAGGGTCAGGGTGGCAGCCCCTaGCCTCTCCTCTTGGCACCCAGGTTCTCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: PASSVEGQGGSP*PLLLAPRFSSS
Trigger: ACTGGAAGAGAACCTGGGTGCCAAGAGGAGAGGGCAGGGGCTGCCACCCTGACCCTCCACTGAGCTGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 72 bp GCATCAGACCCCGTCTTCCGCCTCGAACAAGAGGCGTaGGGACTTCGCCCAGAATGCTCGTCGCCCCTGGAC +
Preference number: 6 (lower is better)
Translates to: ASDPVFRLEQEA*GLRPECSSPLD
Trigger: GTCCAGGGGCGACGAGCATTCTGGGCGAAGTCCGCACGCCTCTTGTTCGAGGCGGAAGACGGGGTCTGATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS CCA 72 bp GCAAACGAATGCGGGAACCAGCCAGTTGCTCCTCTCTaGCAGGCGCAGGCTCTATGCGGCCCCGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: ANECGNQPVAPL*QAQALCGPAAA
Trigger: TGCTGCTGCGGGGCCGCATAGAGCCTGCGCCTGCCAGAGAGGAGCAACTGGCTGGTTCCCGCATTCGTTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 90 bp CTCCTCCAGGCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTGCTTCCCCGCCGCCCCGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: LLQAKLSKDRKGCCH*QAPRLGASPPPRCR
Trigger: GCGGCAGCGGGGCGGCGGGGAAGCACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGCCTGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553719.5
ENST00000556951.5
ENST00000557293.5
ENST00000559361.5
CDS TCA 72 bp GTTCCTTCCAGACCAGCCGCTGTTTTGTTTCCGATGTaGAACCGCGGACCCCGGAGCTGCCTGTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: VPSRPAAVLFPM*NRGPRSCLSQA
Trigger: GGCCTGGGACAGGCAGCTCCGGGGTCCGCGGTTTCACATCGGAAACAAAACAGCGGCTGGTCTGGAAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000357710.8
ENST00000394157.7
ENST00000553599.5
ENST00000553719.5
ENST00000555254.5
ENST00000556011.5
ENST00000556533.5
ENST00000556864.5
ENST00000556951.5
ENST00000557293.5
ENST00000560005.6
CDS CAA 90 bp CTCCTCCAGGCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTATACGCTTCCCCGCCGCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: LLQAKLSKDRKGCCH*QAPRLGIRFPAAPL
Trigger: CAGCGGGGCGGCGGGGAAGCGTATACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGCCTGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394157.7
ENST00000555254.5
ENST00000556533.5
CDS CAA 72 bp TGGGAATCAGAGCAAACGAATGCGGGAACCAGCCAGTaGCTCCTCTCTGGCAGGCGCAGGCTCTATGCGGCC +
Preference number: 6 (lower is better)
Translates to: WESEQTNAGTSQ*LLSGRRRLYAA
Trigger: GGCCGCATAGAGCCTGCGCCTGCCAGAGAGGAGCAACTGGCTGGTTCCCGCATTCGTTTGCTCTGATTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp GCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTGCTTCCCCGCCGCCC +
Preference number: 6 (lower is better)
Translates to: AKLSKDRKGCCH*QAPRLGASPPP
Trigger: GGGCGGCGGGGAAGCACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553719.5
ENST00000556951.5
ENST00000557293.5
ENST00000559361.5
CDS CCA 72 bp ACTCCCTTTCTGTGCCGTGGGCCTGCAGGCACCCTTTaGCATGAACAGCCTGGGTGCCATGGGAGCTATAGA +
Preference number: 6 (lower is better)
Translates to: TPFLCRGPAGTL*HEQPGCHGSYR
Trigger: TCTATAGCTCCCATGGCACCCAGGCTGTTCATGCCAAAGGGTGCCTGCAGGCCCACGGCACAGAAAGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS CAA 90 bp CTCGGAGCGTGGCTCGTTTACTCGGCCACCACACACTCAAACCCCTaGCAAGAGGCAGTGTGCAAGCGAGTGAGTGAGTGTGGGAATCAG +
Preference number: 6 (lower is better)
Translates to: LGAWLVYSATTHSNP*QEAVCKRVSECGNQ
Trigger: CTGATTCCCACACTCACTCACTCGCTTGCACACTGCCTCTTGCAAGGGGTTTGAGTGTGTGGTGGCCGAGTAAACGAGCCACGCTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 72 bp CAGTTCAGACGGCTACTAATCCCGGCCCAAGGCACCTaGGCCCTGAGACGTCTTCGAGCAAACAGCATTTCC +
Preference number: 6 (lower is better)
Translates to: QFRRLLIPAQGT*ALRRLRANSIS
Trigger: GGAAATGCTGTTTGCTCGAAGACGTCTCAGGGCGCAGGTGCCTTGGGCCGGGATTAGTAGCCGTCTGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394164.5
CDS CCA 72 bp TGGATAATTCCCTTGACCCCCTCATGGCTCGGAGCGTaGCTCGTTTACTCGGCCACCACACACTCAAACCCC +
Preference number: 6 (lower is better)
Translates to: WIIPLTPSWLGA*LVYSATTHSNP
Trigger: GGGGTTTGAGTGTGTGGTGGCCGAGTAAACGAGCCACGCTCCGAGCCATGAGGGGGTCAAGGGAATTATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 90 bp CTCCTCCAGGCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCGTTGTCGTCATTTCCGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: LLQAKLSKDRKGCCH*QAPRLGRCRHFRLW
Trigger: CCAGAGCCGGAAATGACGACAACGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGCCTGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557356.5
CDS CAA 72 bp GCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTATACGCTTCCCCGCC +
Preference number: 6 (lower is better)
Translates to: AKLSKDRKGCCH*QAPRLGIRFPA
Trigger: GGCGGGGAAGCGTATACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394157.7
ENST00000555254.5
ENST00000556533.5
CDS CAA 72 bp AACAGCCTGGGTGCCATGGGAGCTATAGACAGCAGGTaGATGGCAGCAGGAGGCAGACAGGCTCTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: NSLGAMGAIDSR*MAAGGRQALSA
Trigger: TGCAGAAAGAGCCTGTCTGCCTCCTGCTGCCATCAACCTGCTGTCTATAGCTCCCATGGCACCCAGGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS CAA 72 bp GGTCTTGTGGTTCTCCCAGTCTGCATGCTAATAAATTaGTATGCATACGCTTCCCCGCCGCCCCGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GLVVLPVCMLIN*YAYASPPPRCR
Trigger: GCGGCAGCGGGGCGGCGGGGAAGCGTATGCATACAAATTTATTAGCATGCAGACTGGGAGAACCACAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554131.5
CDS CAA 90 bp CTCCTCCAGGCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCATTTTGGCGAGGCTGGTCTCGAA +
Preference number: 6 (lower is better)
Translates to: LLQAKLSKDRKGCCH*QAPRLGHFGEAGLE
Trigger: TTCGAGACCAGCCTCGCCAAAATGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGCCTGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560005.6
CDS CAA 90 bp CTCCTCCAGGCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCTTGTGGTTCTCCCAGTCTGCATG +
Preference number: 6 (lower is better)
Translates to: LLQAKLSKDRKGCCH*QAPRLGLVVLPVCM
Trigger: CATGCAGACTGGGAGAACCACAAGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGCCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553447.6
ENST00000554131.5
ENST00000556011.5
CDS GCA 72 bp AATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTGTCATTCTGGCTACGT +
Preference number: 6 (lower is better)
Translates to: NGSGWPRLRLSL*SCRSLLSFWLR
Trigger: ACGTAGCCAGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000394157.7
ENST00000553855.5
ENST00000554131.5
ENST00000555254.5
ENST00000557293.5
ENST00000557511.5
CDS CAA 72 bp TGGCTCGTTTACTCGGCCACCACACACTCAAACCCCTaGCAAGAGGCAGTGTGCAAGCGAGTGAGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: WLVYSATTHSNP*QEAVCKRVSEC
Trigger: ACACTCACTCACTCGCTTGCACACTGCCTCTTGCAAGGGGTTTGAGTGTGTGGTGGCCGAGTAAACGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 72 bp TCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTCTGGCTACGTACAGTA +
Preference number: 6 (lower is better)
Translates to: SGWPRLRLSLCS*RSLLSFWLRTV
Trigger: TACTGTACGTAGCCAGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000394157.7
ENST00000553855.5
ENST00000554131.5
ENST00000555254.5
ENST00000557293.5
ENST00000557511.5
CDS GCA 72 bp TCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTAGTATTGCTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: SGWPRLRLSLCS*RSLLSLVLLRW
Trigger: CCACCTGAGCAATACTAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357710.8
ENST00000394164.5
ENST00000553599.5
ENST00000553719.5
ENST00000555386.5
ENST00000556066.1
ENST00000556533.5
ENST00000556864.5
ENST00000556951.5
ENST00000557037.5
ENST00000557356.5
ENST00000560005.6
CDS GCA 72 bp GCCACCACACACTCAAACCCCTTGCAAGAGGCAGTGTaGAAGCGAGTGAGTGAGTGTGGGAATCAGAGCAAA +
Preference number: 6 (lower is better)
Translates to: ATTHSNPLQEAV*KRVSECGNQSK
Trigger: TTTGCTCTGATTCCCACACTCACTCACTCGCTTGCACACTGCCTCTTGCAAGGGGTTTGAGTGTGTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp GATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTATTGTCATTCTGGCTA +
Preference number: 6 (lower is better)
Translates to: DNGSGWPRLRLS*CSCRSLLSFWL
Trigger: TAGCCAGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000394157.7
ENST00000553855.5
ENST00000554131.5
ENST00000555254.5
ENST00000557293.5
ENST00000557511.5
CDS CAA 72 bp GCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCATTTTGGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: AKLSKDRKGCCH*QAPRLGHFGEA
Trigger: AGCCTCGCCAAAATGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560005.6
CDS CAA 72 bp GCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCTTGTGGTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: AKLSKDRKGCCH*QAPRLGLVVLP
Trigger: TGGGAGAACCACAAGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553447.6
ENST00000554131.5
ENST00000556011.5
CDS GCA 72 bp AATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTGTCATTAGTATTGCTC +
Preference number: 6 (lower is better)
Translates to: NGSGWPRLRLSL*SCRSLLSLVLL
Trigger: GAGCAATACTAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357710.8
ENST00000394164.5
ENST00000553599.5
ENST00000553719.5
ENST00000555386.5
ENST00000556066.1
ENST00000556533.5
ENST00000556864.5
ENST00000556951.5
ENST00000557037.5
ENST00000557356.5
ENST00000560005.6
CDS GCA 72 bp CAGGCTCCCAGATTAGGTCTTGTGGTTCTCCCAGTCTaGATGCTAATAAATTTGTATGCGCTTCCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: QAPRLGLVVLPV*MLINLYALPRR
Trigger: GCGGCGGGGAAGCGCATACAAATTTATTAGCATGCAGACTGGGAGAACCACAAGACCTAATCTGGGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553447.6
CDS CCA 72 bp GAGATCAGCCTGGCCAATATGGCGAGAACTCGTCTCTaGCTACGTACAGTATTGCTCAGGTGGTTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: EISLANMARTRL*LRTVLLRWLSS
Trigger: TGAGGACAACCACCTGAGCAATACTGTACGTAGCCAGAGACGAGTTCTCGCCATATTGGCCAGGCTGATCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556011.5
CDS CAA 72 bp GATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTATTGTCATTCAATAGG +
Preference number: 6 (lower is better)
Translates to: DNGSGWPRLRLS*CSCRSLLSFNR
Trigger: CCTATTGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp GCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCGTTGTCGTCATTTC +
Preference number: 6 (lower is better)
Translates to: AKLSKDRKGCCH*QAPRLGRCRHF
Trigger: GAAATGACGACAACGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557356.5
CDS CAA 90 bp CGTCCATTAGATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTATTGTCATTCTGGCTACGTACAGTA +
Preference number: 6 (lower is better)
Translates to: RPLDNGSGWPRLRLS*CSCRSLLSFWLRTV
Trigger: TACTGTACGTAGCCAGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000394157.7
ENST00000553855.5
ENST00000554131.5
ENST00000555254.5
ENST00000557293.5
ENST00000557511.5
CDS CAA 90 bp CGTCCATTAGATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTATTGTCATTAGTATTGCTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: RPLDNGSGWPRLRLS*CSCRSLLSLVLLRW
Trigger: CCACCTGAGCAATACTAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357710.8
ENST00000394164.5
ENST00000553599.5
ENST00000553719.5
ENST00000555386.5
ENST00000556066.1
ENST00000556533.5
ENST00000556864.5
ENST00000556951.5
ENST00000557037.5
ENST00000557356.5
ENST00000560005.6
CDS CAA 90 bp TTTGGCATGAACAGCCTGGGTGCCATGGGAGCTATAGACAGCAGGTaGATGGCAGCAGGAGGCAGACAGGCTCTTTCTGCATTATACTTG +
Preference number: 6 (lower is better)
Translates to: FGMNSLGAMGAIDSR*MAAGGRQALSALYL
Trigger: CAAGTATAATGCAGAAAGAGCCTGTCTGCCTCCTGCTGCCATCAACCTGCTGTCTATAGCTCCCATGGCACCCAGGCTGTTCATGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553855.5
ENST00000555386.5
CDS CAA 90 bp CTCCTCCAGGCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCTGAATTATGGAAAAGTCACCTCA +
Preference number: 6 (lower is better)
Translates to: LLQAKLSKDRKGCCH*QAPRLGLNYGKVTS
Trigger: TGAGGTGACTTTTCCATAATTCAGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGCCTGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394164.5
ENST00000556864.5
CDS GCA 72 bp AATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTaGTCCTGCCGTTCTCTATTGTCATTCAATAGGAAT +
Preference number: 6 (lower is better)
Translates to: NGSGWPRLRLSL*SCRSLLSFNRN
Trigger: ATTCCTATTGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp GATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTATTGTCATTAGTATTG +
Preference number: 6 (lower is better)
Translates to: DNGSGWPRLRLS*CSCRSLLSLVL
Trigger: CAATACTAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357710.8
ENST00000394164.5
ENST00000553599.5
ENST00000553719.5
ENST00000555386.5
ENST00000556066.1
ENST00000556533.5
ENST00000556864.5
ENST00000556951.5
ENST00000557037.5
ENST00000557356.5
ENST00000560005.6
CDS CAA 72 bp AACGCTCACCTGATTCTCTGCTCGCTGCTCAGCCACTaGTATCACCAACACTCAGTGGCTTGTATTTCCGAC +
Preference number: 6 (lower is better)
Translates to: NAHLILCSLLSH*YHQHSVACISD
Trigger: GTCGGAAATACAAGCCACTGAGTGTTGGTGATACAAGTGGCTGAGCAGCGAGCAGAGAATCAGGTGAGCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp GCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCTTTGTTCCTGTCTT +
Preference number: 6 (lower is better)
Translates to: AKLSKDRKGCCH*QAPRLGLCSCL
Trigger: AAGACAGGAACAAAGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557037.5
CDS CAA 90 bp CTCCTCCAGGCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCTTTGTTCCTGTCTTTATTTTGAG +
Preference number: 6 (lower is better)
Translates to: LLQAKLSKDRKGCCH*QAPRLGLCSCLYFE
Trigger: CTCAAAATAAAGACAGGAACAAAGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGCCTGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557037.5
CDS GCA 72 bp TCAGGGTGGCCAAGGCTCCGTCTGTCGTTGTGCTCCTaGCGTTCTCTATTGTCATTCAATAGGAATTTCAAG +
Preference number: 6 (lower is better)
Translates to: SGWPRLRLSLCS*RSLLSFNRNFK
Trigger: CTTGAAATTCCTATTGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp ATCAGCCTGGCCAATATGGCGAGAACTCGTCTAGTATaGCTCAGGTGGTTGTCCTCAGACATCTGTGCATTC +
Preference number: 6 (lower is better)
Translates to: ISLANMARTRLV*LRWLSSDICAF
Trigger: GAATGCACAGATGTCTGAGGACAACCACCTGAGCAATACTAGACGAGTTCTCGCCATATTGGCCAGGCTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553447.6
ENST00000559361.5
CDS CAA 90 bp CGTCCATTAGATAATGGCTCAGGGTGGCCAAGGCTCCGTCTGTCGTaGTGCTCCTGCCGTTCTCTATTGTCATTCAATAGGAATTTCAAG +
Preference number: 6 (lower is better)
Translates to: RPLDNGSGWPRLRLS*CSCRSLLSFNRNFK
Trigger: CTTGAAATTCCTATTGAATGACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGGCCACCCTGAGCCATTATCTAATGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 72 bp TTTGGATACTCTCCTTTGAGCTTCCGGGTCTCCTTCTaGCATATTCACCAACCACACCATTGTTGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: FGYSPLSFRVSF*HIHQPHHCCCW
Trigger: CCAACAGCAACAATGGTGTGGTTGGTGAATATGGCAGAAGGAGACCCGGAAGCTCAAAGGAGAGTATCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555867.1
CDS GCA 72 bp ATATGGCGAGAACTCGTCTCTGGCTACGTACAGTATTaGTCAGGTGGTTGTCCTCAGACATCTGTGCATTCT +
Preference number: 6 (lower is better)
Translates to: IWRELVSGYVQY*SGGCPQTSVHS
Trigger: AGAATGCACAGATGTCTGAGGACAACCACCTGAGCAATACTGTACGTAGCCAGAGACGAGTTCTCGCCATAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556011.5
CDS GCA 72 bp CAGGCTCCCAGATTAGGTCTTGTGGTTCTCCCAGTCTaGATGCTAATAAATTTGTATGCATACGCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: QAPRLGLVVLPV*MLINLYAYASP
Trigger: CGGGGAAGCGTATGCATACAAATTTATTAGCATGCAGACTGGGAGAACCACAAGACCTAATCTGGGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554131.5
CDS CCA 72 bp TTCTCAGCAGAATGGGGAGTTGAAAAAGGGATGGTATaGGAAGAAGGTGATCTTTCCCTGAAGCCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: FSAEWGVEKGMV*EEGDLSLKPGH
Trigger: ATGGCCTGGCTTCAGGGAAAGATCACCTTCTTCCCATACCATCCCTTTTTCAACTCCCCATTCTGCTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp GCTGCTCAGCCACTTGTATCACCAACACTCAGTGGCTaGTATTTCCGACAATCAGCTGCTTGTATTCCCAAC +
Preference number: 6 (lower is better)
Translates to: AAQPLVSPTLSG*YFRQSAACIPN
Trigger: GTTGGGAATACAAGCAGCTGATTGTCGGAAATACAAGCCACTGAGTGTTGGTGATACAAGTGGCTGAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp GCCAAGCTGTCTAAGGACCGCAAAGGCTGTTGTCACTaGCAGGCTCCCAGATTAGGTCTGAATTATGGAAAA +
Preference number: 6 (lower is better)
Translates to: AKLSKDRKGCCH*QAPRLGLNYGK
Trigger: TTTTCCATAATTCAGACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAGACAGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394164.5
ENST00000556864.5
CDS CAA 72 bp AATATGGCGAGAACTCGTCTCTGGCTACGTACAGTATaGCTCAGGTGGTTGTCCTCAGACATCTGTGCATTC +
Preference number: 6 (lower is better)
Translates to: NMARTRLWLRTV*LRWLSSDICAF
Trigger: GAATGCACAGATGTCTGAGGACAACCACCTGAGCAATACTGTACGTAGCCAGAGACGAGTTCTCGCCATATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556011.5
CDS TCA 72 bp AGATATGCCTGCTGGAGTCGAAGTGGACCTTTCCAGTaGATGGAAATCATTCCCACCACACCAAAATTCCAG +
Preference number: 6 (lower is better)
Translates to: RYACWSRSGPFQ*MEIIPTTPKFQ
Trigger: CTGGAATTTTGGTGTGGTGGGAATGATTTCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
ENST00000553855.5
ENST00000555386.5
ENST00000557511.5
CDS TCA 72 bp CTGCTTGTATTCCCAACACACAGCCATTTATATCCCTaGCGTCAGCTGCTTATATTGTTCTCCCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LLVFPTHSHLYP*RQLLILFSQLL
Trigger: CAGCAGCTGGGAGAACAATATAAGCAGCTGACGTCAGGGATATAAATGGCTGTGTGTTGGGAATACAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 72 bp GCCGTTCTCTATTGTCATTCTGGCTACGTACAGTATTaGTCAGGTGGTTGTCCTCAGACATCTGTGCATTCT +
Preference number: 6 (lower is better)
Translates to: AVLYCHSGYVQY*SGGCPQTSVHS
Trigger: AGAATGCACAGATGTCTGAGGACAACCACCTGAGCAATACTGTACGTAGCCAGAATGACAATAGAGAACGGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000394157.7
ENST00000553855.5
ENST00000554131.5
ENST00000555254.5
ENST00000557293.5
ENST00000557511.5
CDS GCA 72 bp CAGGCTCCCAGATTAGGTCTTGTGGTTCTCCCAGTCTaGATGCTAATAAATTTGTATGCCTTTTGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: QAPRLGLVVLPV*MLINLYAFCFP
Trigger: GGGGAAGCAAAAGGCATACAAATTTATTAGCATGCAGACTGGGAGAACCACAAGACCTAATCTGGGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556011.5
CDS CAA 72 bp TGCCGTTCTCTATTGTCATTCTGGCTACGTACAGTATaGCTCAGGTGGTTGTCCTCAGACATCTGTGCATTC +
Preference number: 6 (lower is better)
Translates to: CRSLLSFWLRTV*LRWLSSDICAF
Trigger: GAATGCACAGATGTCTGAGGACAACCACCTGAGCAATACTGTACGTAGCCAGAATGACAATAGAGAACGGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000394157.7
ENST00000553855.5
ENST00000554131.5
ENST00000555254.5
ENST00000557293.5
ENST00000557511.5
CDS CCA 72 bp CAGCTGAAATATTTTTATGAGCACAGGATAGGGGCATaGCAGGCCAAAGAGGCAACATTTGGGTGGGAAAAA +
Preference number: 6 (lower is better)
Translates to: QLKYFYEHRIGA*QAKEATFGWEK
Trigger: TTTTTCCCACCCAAATGTTGCCTCTTTGGCCTGCCATGCCCCTATCCTGTGCTCATAAAAATATTTCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp TTGCACGATGGAAGTGGTTCTCAGCAGAATGGGGAGTaGAAAAAGGGATGGTATGGGAAGAAGGTGATCTTT +
Preference number: 6 (lower is better)
Translates to: LHDGSGSQQNGE*KKGWYGKKVIF
Trigger: AAAGATCACCTTCTTCCCATACCATCCCTTTTTCAACTCCCCATTCTGCTGAGAACCACTTCCATCGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CCA 72 bp ACTAATCATAATGAGATATGCCTGCTGGAGTCGAAGTaGACCTTTCCAGTGAATGGAAATCATTCCCACCAC +
Preference number: 6 (lower is better)
Translates to: TNHNEICLLESK*TFPVNGNHSHH
Trigger: GTGGTGGGAATGATTTCCATTCACTGGAAAGGTCCACTTCGACTCCAGCAGGCATATCTCATTATGATTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
ENST00000553855.5
ENST00000555386.5
ENST00000557511.5
CDS CAA 72 bp AACACTCAGTGGCTTGTATTTCCGACAATCAGCTGCTaGTATTCCCAACACACAGCCATTTATATCCCTGAC +
Preference number: 6 (lower is better)
Translates to: NTQWLVFPTISC*YSQHTAIYIPD
Trigger: GTCAGGGATATAAATGGCTGTGTGTTGGGAATACAAGCAGCTGATTGTCGGAAATACAAGCCACTGAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS GCA 72 bp AATCATTCCCACCACACCAAAATTCCAGATCAGGAGTaGAACAGTAATGTAGTCCACAGCAACGTTATAGGT +
Preference number: 6 (lower is better)
Translates to: NHSHHTKIPDQE*NSNVVHSNVIG
Trigger: ACCTATAACGTTGCTGTGGACTACATTACTGTTGCACTCCTGATCTGGAATTTTGGTGTGGTGGGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394164.5
ENST00000406768.1
ENST00000553855.5
ENST00000555386.5
ENST00000557511.5
CDS GCA 72 bp AACAGATTGAAGGGTAGTATATGCAGAAGATTGTATTaGACGATGGAAGTGGTTCTCAGCAGAATGGGGAGT +
Preference number: 6 (lower is better)
Translates to: NRLKGSICRRLY*TMEVVLSRMGS
Trigger: ACTCCCCATTCTGCTGAGAACCACTTCCATCGTGCAATACAATCTTCTGCATATACTACCCTTCAATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406768.1
CDS CAA 72 bp TCTGGAAGTAGGACAACGGTGCAGGTAACTCTGTCATaGGAGCAACTGTATAGAAATACTGTTTCACAGAAA +
Preference number: 6 (lower is better)
Translates to: SGSRTTVQVTLS*EQLYRNTVSQK
Trigger: TTTCTGTGAAACAGTATTTCTATACAGTTGCTCCAATGACAGAGTTACCTGCACCGTTGTCCTACTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000324501.10
ENST00000357710.8
ENST00000394157.7
ENST00000394164.5
ENST00000553447.6
ENST00000553599.5
ENST00000553719.5
ENST00000554131.5
ENST00000555254.5
ENST00000556011.5
ENST00000556066.1
ENST00000556533.5
ENST00000556864.5
ENST00000556951.5
ENST00000557037.5
ENST00000557293.5
ENST00000557356.5
ENST00000559361.5
ENST00000560005.6
CDS CAA 72 bp CACATGAACAGATTGAAGGGTAGTATATGCAGAAGATaGTATTGCACGATGGAAGTGGTTCTCAGCAGAATG +
Preference number: 6 (lower is better)
Translates to: HMNRLKGSICRR*YCTMEVVLSRM
Trigger: CATTCTGCTGAGAACCACTTCCATCGTGCAATACAATCTTCTGCATATACTACCCTTCAATCTGTTCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406768.1