RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000125637

Ensembl transcript IDs: ENST00000245796.11, ENST00000409378.1, ENST00000409656.5, ENST00000418251.6, ENST00000441564.7, ENST00000460725.5, ENST00000464559.1, ENST00000465592.1, ENST00000465917.1, ENST00000485525.5, ENST00000487574.1, ENST00000493329.1

Found 1373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTGGGCGGGGCCCACGGGCAGGATGGGCCGCACGAATCTGCGCTaGGAGCCCACAGCGGCGGGGAAGGGCGGCGCGGAGTGCGTGGCC +
Preference number: 1 (lower is better)
Translates to: LWAGPTGRMGRTNLR*EPTAAGKGGAECVA
Trigger: GGCCACGCACTCCGCGCCGCCCTTCCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCCCCGCCCAGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp GATGCTGCTCCTCCAGGGAGCTCTGGGCGGGGCCCACGGGCAGGATaGGCCGCACGAATCTGCGCTGGGAGCCCACAGCGGCGGGGAAGG +
Preference number: 1 (lower is better)
Translates to: DAAPPGSSGRGPRAG*AARICAGSPQRRGR
Trigger: CCTTCCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCCCCGCCCAGAGCTCCCTGGAGGAGCAGCATC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp CAGCCGTGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTaGCGGGGGTGGCCAGCGAGTGGTGCACCCCCACGGGCTCATCCA +
Preference number: 1 (lower is better)
Translates to: QPCAAGRRAASWCNA*RGWPASGAPPRAHP
Trigger: TGGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp CTCTGGGAGGAAAGTCAAGTCCTCACCTCCCTCTTCCCTTGGGCGTaGCCAGGGACTGGGGCTGCGGAGGGACTGCCATGGGGGTGGTGG +
Preference number: 1 (lower is better)
Translates to: LWEESQVLTSLFPWA*PGTGAAEGLPWGWW
Trigger: CCACCACCCCCATGGCAGTCCCTCCGCAGCCCCAGTCCCTGGCCACGCCCAAGGGAAGAGGGAGGTGAGGACTTGACTTTCCTCCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTaGCCAGCGAGTGGTGCACCCCCACGGGCTCATCCACCATCTGCC +
Preference number: 1 (lower is better)
Translates to: AAGRRAASWCNAWRG*PASGAPPRAHPPSA
Trigger: GGCAGATGGTGGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp CGGGTAGCAGAGGCCCCCTCTTGGCGGGCAGCCTACTTGCACACTTaGCTGAACAGAGACAATGGTGGCTGGTCCCTCCGGCCCAGCCTC +
Preference number: 1 (lower is better)
Translates to: RVAEAPSWRAAYLHT*LNRDNGGWSLRPSL
Trigger: GAGGCTGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCTACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp TCCGGTAGGTTCTGCGCTCTGAGATGTTGCGCTTCACCTTGGCCGTaGTGGGAGCCTCATCCTGGTGCAGGGACGGGCTCGAGTGGGACT +
Preference number: 1 (lower is better)
Translates to: SGRFCALRCCASPWP*WEPHPGAGTGSSGT
Trigger: AGTCCCACTCGAGCCCGTCCCTGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTACCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR GCA 90 bp TGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCTTaGTCATCTTGCCAGCTGGCAGGGACGGCTGGGCCTTCTCAGGTC +
Preference number: 1 (lower is better)
Translates to: CRWALWDPEPAEGRA*SSCQLAGTAGPSQV
Trigger: GACCTGAGAAGGCCCAGCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp AGTGTGTCAGCCGGCAGGCAGCAGCGGGTAGCAGAGGCCCCCTCTTaGCGGGCAGCCTACTTGCACACTTGGCTGAACAGAGACAATGGT +
Preference number: 1 (lower is better)
Translates to: SVSAGRQQRVAEAPS*RAAYLHTWLNRDNG
Trigger: ACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCTACCCGCTGCTGCCTGCCGGCTGACACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp TTGGGTGCATGGCCTAGCCCTAGGCCCTGGCCGGAGACCCAAACATaGCCTCCAAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAG +
Preference number: 1 (lower is better)
Translates to: LGAWPSPRPWPETQT*PPRANLTLWRCKPQ
Trigger: CTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTTGGAGGCCATGTTTGGGTCTCCGGCCAGGGCCTAGGGCTAGGCCATGCACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GGTAGGTTCTGCGCTCTGAGATGTTGCGCTTCACCTTGGCCGTGGTaGGAGCCTCATCCTGGTGCAGGGACGGGCTCGAGTGGGACTTCT +
Preference number: 1 (lower is better)
Translates to: GRFCALRCCASPWPW*EPHPGAGTGSSGTS
Trigger: AGAAGTCCCACTCGAGCCCGTCCCTGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp GTCATAACTGCAGCCCACAACCCAGACCCTCCAGGCAGAGGTGCCTaGGCAGCATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGG +
Preference number: 1 (lower is better)
Translates to: VITAAHNPDPPGRGA*AALTMAGQAATIIW
Trigger: CCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAATGCTGCCCAGGCACCTCTGCCTGGAGGGTCTGGGTTGTGGGCTGCAGTTATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp GAGCCAAGTGCAAAGCTACCCAGCATCCAAGCAGGATGGCATGCATaGGGGCAGAGCCTAAGCCAGAGCCCAAAGGAGGAGGGGAGCAGA +
Preference number: 1 (lower is better)
Translates to: EPSAKLPSIQAGWHA*GQSLSQSPKEEGSR
Trigger: TCTGCTCCCCTCCTCCTTTGGGCTCTGGCTTAGGCTCTGCCCTCATGCATGCCATCCTGCTTGGATGCTGGGTAGCTTTGCACTTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp GGCAGCCACTTCAGACTTCCGGAAGCCCTCCAGGCGATAGAGGCGTaGGGCCAAGTTCCAGGCTACCTTGTTGTTCCTGACGCCATTAGC +
Preference number: 1 (lower is better)
Translates to: GSHFRLPEALQAIEA*GQVPGYLVVPDAIS
Trigger: GCTAATGGCGTCAGGAACAACAAGGTAGCCTGGAACTTGGCCTCACGCCTCTATCGCCTGGAGGGCTTCCGGAAGTCTGAAGTGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp AGTGGGCAGGACCTTAGCGACCCTGCTCCCTGGGTCACAGGAGGCTaGTTAGGAATTTCTCAAGAGTCCCTGATTCACTCTCCTGGGGCC +
Preference number: 1 (lower is better)
Translates to: SGQDLSDPAPWVTGG*LGISQESLIHSPGA
Trigger: GGCCCCAGGAGAGTGAATCAGGGACTCTTGAGAAATTCCTAACCAGCCTCCTGTGACCCAGGGAGCAGGGTCGCTAAGGTCCTGCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp TGGCCGGAGACCCAAACATGGCCTCCAAGGGCCAACCTTACTTTGTaGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGGAAGGGAGG +
Preference number: 1 (lower is better)
Translates to: WPETQTWPPRANLTL*RCKPQSWLQAWEGR
Trigger: CCTCCCTTCCCATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTTGGAGGCCATGTTTGGGTCTCCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp ATTGCGGTTCCGCTTAGGGATGATCTTCCGGTAGGTTCTGCGCTCTaGGATGTTGCGCTTCACCTTGGCCGTGGTGGGAGCCTCATCCTG +
Preference number: 1 (lower is better)
Translates to: IAVPLRDDLPVGSAL*DVALHLGRGGSLIL
Trigger: CAGGATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTACCGGAAGATCATCCCTAAGCGGAACCGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR GCA 90 bp GAGACCCAAACATGGCCTCCAAGGGCCAACCTTACTTTGTGGAGGTaGAAGCCCCAGAGCTGGTTACAAGCATGGGAAGGGAGGAGGGTG +
Preference number: 1 (lower is better)
Translates to: ETQTWPPRANLTLWR*KPQSWLQAWEGRRV
Trigger: CACCCTCCTCCCTTCCCATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTTGGAGGCCATGTTTGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp GGAGCAAAGAGGGATGAAGCCTGCCACACTGCAGGTGGTCCTAGCTaGCTGACCTCCCTTCCTCACACACTGACACACCTCCCTCTTTGT +
Preference number: 1 (lower is better)
Translates to: GAKRDEACHTAGGPS*LTSLPHTLTHLPLC
Trigger: ACAAAGAGGGAGGTGTGTCAGTGTGTGAGGAAGGGAGGTCAGGCAGCTAGGACCACCTGCAGTGTGGCAGGCTTCATCCCTCTTTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GAAGGCTGTCCCCTCAGTGGGCAGGACCTTAGCGACCCTGCTCCCTaGGTCACAGGAGGCTGGTTAGGAATTTCTCAAGAGTCCCTGATT +
Preference number: 1 (lower is better)
Translates to: EGCPLSGQDLSDPAP*VTGGWLGISQESLI
Trigger: AATCAGGGACTCTTGAGAAATTCCTAACCAGCCTCCTGTGACCCAGGGAGCAGGGTCGCTAAGGTCCTGCCCACTGAGGGGACAGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GGTCAGAGCAGCGAATGTGGACATGTAGAGGGAGGAGGCCAGGAGTaGTGGGCAAGACTGTCAGCAAGCCTGCACAGGGAAAGCATCTCT +
Preference number: 1 (lower is better)
Translates to: GQSSECGHVEGGGQE*WARLSASLHRESIS
Trigger: AGAGATGCTTTCCCTGTGCAGGCTTGCTGACAGTCTTGCCCACCACTCCTGGCCTCCTCCCTCTACATGTCCACATTCGCTGCTCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp CACTGGGGCAAGATCAGGCTGAGCCTGGGTGCAGGGTCTGGTAGATaGTCACATAGCTATCAAGGCCAAAGGTCGCTGAGAGGTGATGGC +
Preference number: 1 (lower is better)
Translates to: HWGKIRLSLGAGSGR*SHSYQGQRSLRGDG
Trigger: GCCATCACCTCTCAGCGACCTTTGGCCTTGATAGCTATGTGATCATCTACCAGACCCTGCACCCAGGCTCAGCCTGATCTTGCCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp TGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTaGTCAGGTGAAAGAGAGGTGCCGGTTCTACATGAGCAAAGGAGC +
Preference number: 1 (lower is better)
Translates to: WQARQPPSSGSEDST*SGEREVPVLHEQRS
Trigger: GCTCCTTTGCTCATGTAGAACCGGCACCTCTCTTTCACCTGAGCACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTaGCTTTCAGGGAGCACAGCTCAGCTCCACAGCAGGACACCTGAG +
Preference number: 1 (lower is better)
Translates to: RSWFGDGTGAHIITS*LSGSTAQLHSRTPE
Trigger: CTCAGGTGTCCTGCTGTGGAGCTGAGCTGTGCTCCCTGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp CCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTGGGCAAAATaGCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCTCCTGGGACG +
Preference number: 1 (lower is better)
Translates to: PRVKTVKHLVSTWAK*LSCGVEAAGCPPGT
Trigger: CGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR GCA 90 bp GCGTCTTCTTGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATaGCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAA +
Preference number: 1 (lower is better)
Translates to: ASSCRLHLDAFSEPG*PACRWALWDPEPAE
Trigger: TTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGAAGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp CACCTGAGCAGCCAGAAGCTAGAAAGATGCAAGCCTGCCTCCAAGTaGTCACATGTCATAACTGCAGCCCACAACCCAGACCCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: HLSSQKLERCKPASK*SHVITAAHNPDPPG
Trigger: GCCTGGAGGGTCTGGGTTGTGGGCTGCAGTTATGACATGTGACCACTTGGAGGCAGGCTTGCATCTTTCTAGCTTCTGGCTGCTCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp CAGAGCAGCGAATGTGGACATGTAGAGGGAGGAGGCCAGGAGTGGTaGGCAAGACTGTCAGCAAGCCTGCACAGGGAAAGCATCTCTTCT +
Preference number: 1 (lower is better)
Translates to: QSSECGHVEGGGQEW*ARLSASLHRESISS
Trigger: AGAAGAGATGCTTTCCCTGTGCAGGCTTGCTGACAGTCTTGCCCACCACTCCTGGCCTCCTCCCTCTACATGTCCACATTCGCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp TCACAATTCCTAGCTGGGTCCAACTCAGGGTCAGAGCAGCGAATGTaGACATGTAGAGGGAGGAGGCCAGGAGTGGTGGGCAAGACTGTC +
Preference number: 1 (lower is better)
Translates to: SQFLAGSNSGSEQRM*TCRGRRPGVVGKTV
Trigger: GACAGTCTTGCCCACCACTCCTGGCCTCCTCCCTCTACATGTCCACATTCGCTGCTCTGACCCTGAGTTGGACCCAGCTAGGAATTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp GGAGCATGGGGTGGGAACAAGGTCAGACATAGGCCTGTGGTGGTTTaGTCTGTTCCATACCTAGGATGGGGACTGGAGCCTGCTCAGCTT +
Preference number: 1 (lower is better)
Translates to: GAWGGNKVRHRPVVV*SVPYLGWGLEPAQL
Trigger: AAGCTGAGCAGGCTCCAGTCCCCATCCTAGGTATGGAACAGATCAAACCACCACAGGCCTATGTCTGACCTTGTTCCCACCCCATGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp TGTGGTGGTTTGATCTGTTCCATACCTAGGATGGGGACTGGAGCCTaGTCAGCTTTCACCTTCCAGCGTTACCTGGAGCAACCCTGTGGG +
Preference number: 1 (lower is better)
Translates to: CGGLICSIPRMGTGA*SAFTFQRYLEQPCG
Trigger: CCCACAGGGTTGCTCCAGGTAACGCTGGAAGGTGAAAGCTGAGCAGGCTCCAGTCCCCATCCTAGGTATGGAACAGATCAAACCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp TCCCTCTTTGTTGACCTGTTATTTATTGTGCACCCATTGGGTGCATaGCCTAGCCCTAGGCCCTGGCCGGAGACCCAAACATGGCCTCCA +
Preference number: 1 (lower is better)
Translates to: SLFVDLLFIVHPLGA*PSPRPWPETQTWPP
Trigger: TGGAGGCCATGTTTGGGTCTCCGGCCAGGGCCTAGGGCTAGGCCATGCACCCAATGGGTGCACAATAAATAACAGGTCAACAAAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp AAGTTGCACTGCACATTCACAAAAAGCCACTCTCCTTGGCTGCATTaGAGACCCTGTATGATCTGGCCTCAGGCCACCCTGACGGCCCTG +
Preference number: 1 (lower is better)
Translates to: KLHCTFTKSHSPWLH*RPCMIWPQATLTAL
Trigger: CAGGGCCGTCAGGGTGGCCTGAGGCCAGATCATACAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTTTGTGAATGTGCAGTGCAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp CACAGCAGGACACCTGAGCAGCCAGAAGCTAGAAAGATGCAAGCCTaGCTCCAAGTGGTCACATGTCATAACTGCAGCCCACAACCCAGA +
Preference number: 1 (lower is better)
Translates to: HSRTPEQPEARKMQA*LQVVTCHNCSPQPR
Trigger: TCTGGGTTGTGGGCTGCAGTTATGACATGTGACCACTTGGAGGCAGGCTTGCATCTTTCTAGCTTCTGGCTGCTCAGGTGTCCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GACACACCTCCCTCTTTGTTGACCTGTTATTTATTGTGCACCCATTaGGTGCATGGCCTAGCCCTAGGCCCTGGCCGGAGACCCAAACAT +
Preference number: 1 (lower is better)
Translates to: DTPPSLLTCYLLCTH*VHGLALGPGRRPKH
Trigger: ATGTTTGGGTCTCCGGCCAGGGCCTAGGGCTAGGCCATGCACCCAATGGGTGCACAATAAATAACAGGTCAACAAAGAGGGAGGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp AGCCTGCTCAGCTTTCACCTTCCAGCGTTACCTGGAGCAACCCTGTaGGGAGCTGTAGGCTGTCCCCATAGACTTCTGAGATGTCTTTCT +
Preference number: 1 (lower is better)
Translates to: SLLSFHLPALPGATL*GAVGCPHRLLRCLS
Trigger: AGAAAGACATCTCAGAAGTCTATGGGGACAGCCTACAGCTCCCCACAGGGTTGCTCCAGGTAACGCTGGAAGGTGAAAGCTGAGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GAGATCATGAGAGCCCAGGAAGCAGTTATATCAGGAGTAACAACCTaGGTCACAGCAGGCCCAGGACCCTGGAAGCTGAGCTCCCCTATA +
Preference number: 1 (lower is better)
Translates to: EIMRAQEAVISGVTT*VTAGPGPWKLSSPI
Trigger: TATAGGGGAGCTCAGCTTCCAGGGTCCTGGGCCTGCTGTGACCCAGGTTGTTACTCCTGATATAACTGCTTCCTGGGCTCTCATGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp CATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTaGGCAAAATGCCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCT +
Preference number: 1 (lower is better)
Translates to: HPSPRVKTVKHLVST*AKCLSCGVEAAGCP
Trigger: AGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR TCA 90 bp CTTCAGCAGGGAAAGGAGGTGCCTCATCCGTCATGGTGGACTCATTaGAATAAGTCTCCTCCAGGGAGGTTCATCTCAGGTCTACCCTGG +
Preference number: 1 (lower is better)
Translates to: LQQGKEVPHPSWWTH*NKSPPGRFISGLPW
Trigger: CCAGGGTAGACCTGAGATGAACCTCCCTGGAGGAGACTTATTTCAATGAGTCCACCATGACGGATGAGGCACCTCCTTTCCCTGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000409656.5
ENST00000441564.7
3UTR GCA 90 bp TTCTGCAGAAGTCAGGTGAATGTCAGGCTGGACGTCTCCAGTCTCTaGAGGCCTGGCTGTTCCTTCACTCTTTACTTCCTCGCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: FCRSQVNVRLDVSSL*RPGCSFTLYFLAWF
Trigger: AAACCAGGCGAGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGCCTGACATTCACCTGACTTCTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 90 bp AAGACTGTCAGCAAGCCTGCACAGGGAAAGCATCTCTTCTGTGTCTaGGTACCTCCTCCTGAACCTGTGTCACACCACAGAGGAGGACAA +
Preference number: 1 (lower is better)
Translates to: KTVSKPAQGKHLFCV*VPPPEPVSHHRGGQ
Trigger: TTGTCCTCCTCTGTGGTGTGACACAGGTTCAGGAGGAGGTACCCAGACACAGAAGAGATGCTTTCCCTGTGCAGGCTTGCTGACAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp AGGGCCACAGGGAAACAAGGTTTGTCCTTCAGCAGGGAAAGGAGGTaGCTCATCCGTCATGGTGGACTCATTGAAATAAGTCTCCTCCAG +
Preference number: 1 (lower is better)
Translates to: RATGKQGLSFSRERR*LIRHGGLIEISLLQ
Trigger: CTGGAGGAGACTTATTTCAATGAGTCCACCATGACGGATGAGGCACCTCCTTTCCCTGCTGAAGGACAAACCTTGTTTCCCTGTGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000409656.5
ENST00000441564.7
3UTR GCA 90 bp AAGGCATCAGAGTTGATGACTGCAGCCATCAATTGCCCTAGGAGGTaGCATTTCAGGCAAAGGTGGGGTGGACGCCGATTTGTAAGGTGT +
Preference number: 1 (lower is better)
Translates to: KASELMTAAINCPRR*HFRQRWGGRRFVRC
Trigger: ACACCTTACAAATCGGCGTCCACCCCACCTTTGCCTGAAATGGCACCTCCTAGGGCAATTGATGGCTGCAGTCATCAACTCTGATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp CCAGCCCTCACTCATGCCATCAGCTCTGCTCTGTTGATGAGCAGTTaGGTATGTGAGACTGTTTCATCTACTTCGGGGGAAAGGAGACAC +
Preference number: 1 (lower is better)
Translates to: PALTHAISSALLMSS*VCETVSSTSGERRH
Trigger: GTGTCTCCTTTCCCCCGAAGTAGATGAAACAGTCTCACATACCCAACTGCTCATCAACAGAGCAGAGCTGATGGCATGAGTGAGGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp CCTCTCCAGTGGTCTGAACATAGAGAACCTCCTTCTCTGCTCTGTTaGAACAAAGGCTCCTTGTTCCTAGGGTTCCAGGGTTCCCTGCAA +
Preference number: 1 (lower is better)
Translates to: PLQWSEHREPPSLLC*NKGSLFLGFQGSLQ
Trigger: TTGCAGGGAACCCTGGAACCCTAGGAACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGGAGGTTCTCTATGTTCAGACCACTGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp ACTGCAGCCATCAATTGCCCTAGGAGGTGCCATTTCAGGCAAAGGTaGGGTGGACGCCGATTTGTAAGGTGTGAATTAGAGCCAGGTATG +
Preference number: 1 (lower is better)
Translates to: TAAINCPRRCHFRQR*GGRRFVRCELEPGM
Trigger: CATACCTGGCTCTAATTCACACCTTACAAATCGGCGTCCACCCCACCTTTGCCTGAAATGGCACCTCCTAGGGCAATTGATGGCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp GTGGGGAGCACAGCAATATTAGGAAAGCTTCAGGGAGCACAAGAATaGGGGCCACAGGGAAACAAGGTTTGTCCTTCAGCAGGGAAAGGA +
Preference number: 1 (lower is better)
Translates to: VGSTAILGKLQGAQE*GPQGNKVCPSAGKG
Trigger: TCCTTTCCCTGCTGAAGGACAAACCTTGTTTCCCTGTGGCCCTCATTCTTGTGCTCCCTGAAGCTTTCCTAATATTGCTGTGCTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp CATTTGAGCTCAGATTTGTTATTTGCAGGCCAAGGCAGAGCCAAGTaGAAAGCTACCCAGCATCCAAGCAGGATGGCATGCATGAGGGCA +
Preference number: 1 (lower is better)
Translates to: HLSSDLLFAGQGRAK*KATQHPSRMACMRA
Trigger: TGCCCTCATGCATGCCATCCTGCTTGGATGCTGGGTAGCTTTGCACTTGGCTCTGCCTTGGCCTGCAAATAACAAATCTGAGCTCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp AGTGGAAATCAACAATCCCAGTTCCTGCCCACAGGGAGTTTATGTTaGTCTGGAAGCAGAGAGGCAAAAAGAAATGAAGAGGGCCGGGGC +
Preference number: 1 (lower is better)
Translates to: SGNQQSQFLPTGSLC*SGSREAKRNEEGRG
Trigger: GCCCCGGCCCTCTTCATTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAACTGGGATTGTTGATTTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp CACTCATGCCATCAGCTCTGCTCTGTTGATGAGCAGTTGGGTATGTaGGACTGTTTCATCTACTTCGGGGGAAAGGAGACACAAGGAGAC +
Preference number: 1 (lower is better)
Translates to: HSCHQLCSVDEQLGM*DCFIYFGGKETQGD
Trigger: GTCTCCTTGTGTCTCCTTTCCCCCGAAGTAGATGAAACAGTCTCACATACCCAACTGCTCATCAACAGAGCAGAGCTGATGGCATGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp ATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTaGCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAA +
Preference number: 1 (lower is better)
Translates to: ISGPGEAVEINNPSS*PQGVYVALEAERQK
Trigger: TTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTaGAAATCAACAATCCCAGTTCCTGCCCACAGGGAGTTTATGTTG +
Preference number: 1 (lower is better)
Translates to: DVHSFDSRYQALGKQ*KSTIPVPAHREFML
Trigger: CAACATAAACTCCCTGTGGGCAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp CATAGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTaGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCCCACAGGG +
Preference number: 1 (lower is better)
Translates to: HSFEMCILSTLDIRP*GSSGNQQSQFLPTG
Trigger: CCCTGTGGGCAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp ACCCAAGGAGCTTTAAACATATTTATCTATCCCTCTGACCCAGGCTaGCTGAATCAGCATCCCTGGGTGTGGGCTGGGAATGTGTCTTTT +
Preference number: 1 (lower is better)
Translates to: TQGALNIFIYPSDPG*LNQHPWVWAGNVSF
Trigger: AAAAGACACATTCCCAGCCCACACCCAGGGATGCTGATTCAGTCAGCCTGGGTCAGAGGGATAGATAAATATGTTTAAAGCTCCTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp CATCAGAATTACCCAAGGAGCTTTAAACATATTTATCTATCCCTCTaGCCCAGGCTGACTGAATCAGCATCCCTGGGTGTGGGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: HQNYPRSFKHIYLSL*PRLTESASLGVGWE
Trigger: TTCCCAGCCCACACCCAGGGATGCTGATTCAGTCAGCCTGGGTCAGAGGGATAGATAAATATGTTTAAAGCTCCTTGGGTAATTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp GCAGAGAGTCACTTTCTGCTATATTTGCACCAAGAAAATGGATCTTaGGAGTTCCTGGGGCCATCTTGGAAGCATGAGGGTTGTTCCTGC +
Preference number: 1 (lower is better)
Translates to: AESHFLLYLHQENGS*EFLGPSWKHEGCSC
Trigger: GCAGGAACAACCCTCATGCTTCCAAGATGGCCCCAGGAACTCTCAAGATCCATTTTCTTGGTGCAAATATAGCAGAAAGTGACTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp GTACTCACAATTTCTCCACAGCTGGTCCCTATGTTTTGGTGGTGCTaGCTTCACTCTCATCCTCTCCAGAAGTGGACTCTGATCTCCTTA +
Preference number: 1 (lower is better)
Translates to: VLTISPQLVPMFWWC*LHSHPLQKWTLISL
Trigger: TAAGGAGATCAGAGTCCACTTCTGGAGAGGATGAGAGTGAAGTCAGCACCACCAAAACATAGGGACCAGCTGTGGAGAAATTGTGAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GAAAAAGGTGCGGGTCTTGGTGATCTTTTTATCTACCCTGGTGCCTaGCAAGCAACAAACAAATATCATCAGCAGAAAGCCAGGCTCAGC +
Preference number: 1 (lower is better)
Translates to: EKGAGLGDLFIYPGA*QATNKYHQQKARLS
Trigger: GCTGAGCCTGGCTTTCTGCTGATGATATTTGTTTGTTGCTTGCCAGGCACCAGGGTAGATAAAAAGATCACCAAGACCCGCACCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp TGGCAAGCAACAAACAAATATCATCAGCAGAAAGCCAGGCTCAGCTaGGATCATGAGAGCCCAGGAAGCAGTTATATCAGGAGTAACAAC +
Preference number: 1 (lower is better)
Translates to: WQATNKYHQQKARLS*DHESPGSSYIRSNN
Trigger: GTTGTTACTCCTGATATAACTGCTTCCTGGGCTCTCATGATCTCAGCTGAGCCTGGCTTTCTGCTGATGATATTTGTTTGTTGCTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp TCAGCTATTGGAGCCAATCAAAGTCCTTTTCTGCTAAAGCTCATTTaGGCTCAGATTTGTTATTTGCAGGCCAAGGCAGAGCCAAGTGCA +
Preference number: 1 (lower is better)
Translates to: SAIGANQSPFLLKLI*AQICYLQAKAEPSA
Trigger: TGCACTTGGCTCTGCCTTGGCCTGCAAATAACAAATCTGAGCTCAAATGAGCTTTAGCAGAAAAGGACTTTGATTGGCTCCAATAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 90 bp GTGAGGTCAAATAACCTACTCCACTTAGTTTGTAAGCATCAGTCTTaGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCACTTCAAT +
Preference number: 1 (lower is better)
Translates to: VRSNNLLHLVCKHQS*AKSHVHLMLGFHFN
Trigger: ATTGAAGTGGAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTGGAGTAGGTTATTTGACCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp CTATGGAAAGCAAGAGAGTCTAACACCAGCTTTGATTTTTGCTCATaGTGGTGTTTGCAAGGCATGATAATGAAGGGGGTAGAGAATAGG +
Preference number: 1 (lower is better)
Translates to: LWKARESNTSFDFCS*WCLQGMIMKGVENR
Trigger: CCTATTCTCTACCCCCTTCATTATCATGCCTTGCAAACACCATCATGAGCAAAAATCAAAGCTGGTGTTAGACTCTCTTGCTTTCCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 90 bp CATATAAGTTACACAAATAGTACAGTGCATTTGCAGGCCATATTCTaGCCCTACCCATTGGCCTTACTTTTTCAAGGCATTTCATCTTTT +
Preference number: 1 (lower is better)
Translates to: HISYTNSTVHLQAIF*PYPLALLFQGISSF
Trigger: AAAAGATGAAATGCCTTGAAAAAGTAAGGCCAATGGGTAGGGTCAGAATATGGCCTGCAAATGCACTGTACTATTTGTGTAACTTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 90 bp TTCCACTTCAATCAAATGAGGCAATTGGACTCTACTGCAGCTAACTaGTACTTACACATCAGAATTACCCAAGGAGCTTTAAACATATTT +
Preference number: 1 (lower is better)
Translates to: FHFNQMRQLDSTAAN*YLHIRITQGALNIF
Trigger: AAATATGTTTAAAGCTCCTTGGGTAATTCTGATGTGTAAGTAGCAGTTAGCTGCAGTAGAGTCCAATTGCCTCATTTGATTGAAGTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCATCTCCATGCAGGGCTGGGCCTaGGACCAGGGCCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: AECVAAAKLMRAIQELISMQGWA*DQGLCS
Trigger: AGAGCAGAGGCCCTGGTCCCAGGCCCAGCCCTGCAT...GGAGATGAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp CGGGCAGGATGGGCCGCACGAATCTGCGCTGGGAGCCCACAGCGGCGGGGAAGGTGTAGGTGGGCACTGTaGGATCCTGAGCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: RAGWAARICAGSPQRRGRCRWAL*DPEPAE
Trigger: TTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACA...CCTTCCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CAA 90 bp GCGGGTAGCAGAGGCCCCCTCTTGGCGGGCAGCCTACTTGCACACTaGGCTGAACAGAGACAATGGTGGCTGGTCCCTCCGGCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: AGSRGPLLAGSLLAH*AEQRQWWLVPPAQP
Trigger: AGGCTGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCTACCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAGCGAGGCAGGAGAACGGCCTaGGCACCACCTCCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: QLEDVRLLGVMRGGGGQRGRRTA*APPPEA
Trigger: AGCCTCTGGAGGTGGTGCCCAGGCCGTTCTCCTGCC...TCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CAA 90 bp AGGCAGCAGCGGGTAGCAGAGGCCCCCTCTTGGCGGGCAGCCTACTaGCACACTTGGCTGAACAGAGACAATGGTGGCTGGTCCCTCCGG +
Preference number: 2 (lower is better)
Translates to: RQQRVAEAPSWRAAY*HTWLNRDNGGWSLR
Trigger: CCGGAGGGACCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCTACCCGCTGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCGGATTCGCTCCCGTTCCTaGGTCTCCCCACTGAGCACC +
Preference number: 2 (lower is better)
Translates to: RPGSSRGIDAAPPGSSGRIRSRS*VSPLST
Trigger: GGTGCTCAGTGGGGAGACTCAGGAACGGGAGCGAAT...CCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CAA 90 bp CAGTGTGTCAGCCGGCAGGCAGCAGCGGGTAGCAGAGGCCCCCTCTaGGCGGGCAGCCTACTTGCACACTTGGCTGAACAGAGACAATGG +
Preference number: 2 (lower is better)
Translates to: QCVSRQAAAGSRGPL*AGSLLAHLAEQRQW
Trigger: CCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCTACCCGCTGCTGCCTGCCGGCTGACACACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCGGAGGAAGAACATGAAGTaGGGCGGGCACAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RPGSSRGIDAAPPGSSGRRKNMK*GGHRAG
Trigger: TCCTGCCCTGTGCCCGCCTCACTTCATGTTCTTCCT...CCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR TCA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCACAGGCGATAGAGGCGTaGGGCCAAGTTCCAGGCTAC +
Preference number: 2 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPQAIEA*GQVPGY
Trigger: GTAGCCTGGAACTTGGCCTCACGCCTCTATCGCCTG...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp CCGTGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGTGCCCTGCTTGTAGGTaGGCACTGTGGGATCCTGAG +
Preference number: 2 (lower is better)
Translates to: PCAAGRRAASWCNAWRGWCPACR*ALWDPE
Trigger: CTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCA...CCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR GCA 90 bp CAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAGCGAGCTGAAGGAAGGGCTTaGTCATCTTGCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: QLEDVRLLGVMRGGGGQRAEGRA*SSCQLA
Trigger: TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGC...TCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR GCA 90 bp CAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAGCGATTTTCCGAGCCAGGATaGCCTGCTTGTAGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: QLEDVRLLGVMRGGGGQRFSEPG*PACRWA
Trigger: TGCCCACCTACAAGCAGGGCATCCTGGCTCGGAAAA...TCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAACCTCCCTCTTCCCTTaGGCGTGGCCAGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVATSLFP*AWPGTG
Trigger: CCCAGTCCCTGGCCACGCCCAAGGGAAGAGGGAGGT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAAGCCAGAGGGCAGGATaGGGGGATTTCCCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVASQRAG*GDFPGE
Trigger: CTCCCCTGGGAAATCCCCTCATCCTGCCCTCTGGCT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGGCCTCAGGCCACCCTaGCGGCCCTGTTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPGLRPP*RPCFPL
Trigger: CAGAGGGAAACAGGGCCGTCAGGGTGGCCTGAGGCC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGGCCTAGGCCTCGCCTaGTCGCCAGCCTCCGTCCCA +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSGLGLA*SPASVP
Trigger: TGGGACGGAGGCTGGCGACCAGGCGAGGCCTAGGCC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAAAAGTCTCCCGAGCCTaGCCTAGGCCTCGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAKVSRA*PRPRLV
Trigger: GACCAGGCGAGGCCTAGGCCAGGCTCGGGAGACTTT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTCTTCTTCATCCACGGCCCACTCGAGCTTCTCGCTGCGGATAGACCAGTAGAGGTGACCTCTCCCACTTaGAGAGGCAGCAGACAGCGG +
Preference number: 2 (lower is better)
Translates to: VFFIHGPLELLAADRPVEVTSPT*RGSRQR
Trigger: CCGCTGTCTGCTGCCTCTGCAAGTGGGAGAGGTCAC...CTCTACTGGTCTATCCGCAGCGAGAAGCTCGAGTGGGCCGTGGATGAAGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR GCA 90 bp CGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCGGCGTCTTCTTGCCGTCTaGATCTTGATGCATTTTCCG +
Preference number: 2 (lower is better)
Translates to: RPGSSRGIDAAPPGSSGRRLLAV*ILMHFP
Trigger: CGGAAAATGCATCAAGATGCAGACGGCAAGAAGACG...CCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGCGGAGGGACTGCCATaGGGGTGGTGGGGAGCACAG +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSAEGLP*GWWGAQ
Trigger: CTGTGCTCCCCACCACCCCCATGGCAGTCCCTCCGC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGCAGAGGCCCCCTCTTaGCGGGCAGCCTACTTGCAC +
Preference number: 2 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMAEAPS*RAAYLH
Trigger: GTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGCAGGCCCAGGACCCTaGAAGCTGAGCTCCCCTATA +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAAGPGP*KLSSPI
Trigger: TATAGGGGAGCTCAGCTTCCAGGGTCCTGGGCCTGC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCTTGCTCATCTTGCCAGCTGGCACTTGTCTCCAGCTGGTaGTCTCTGGCCTTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LWDPEPAEGRACSSCQLALVSSW*SLAFLW
Trigger: CCAGAGGAAGGCCAGAGACCACCAGCTGGAGACAAG...TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCCCTCACAACTCTCCTaGGCTGTGGCTCCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMPSQLS*AVAPAR
Trigger: CCTGGCAGGAGCCACAGCTCAGGAGAGTTGTGAGGG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACTGCCCAGGGGCCTCTaGTGCCCCAAGCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKLPRGL*CPKLSP
Trigger: GGGGGAGAGCTTGGGGCAGCAGAGGCCCCTGGGCAG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGAAGAGGAGCCAGTGTaGCGGCTGAGGGGAACAGTT +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAEEEPV*RLRGTV
Trigger: AACTGTTCCCCTCAGCCGGCACACTGGCTCCTCTTC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCATCCACTTGGGCAAAATaGCTGAGCTGTGGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPSTWAK*LSCGVE
Trigger: TTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGA...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAACCTCCCTCTTCCCTTaGGCGTGGCCAGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSTSLFP*AWPGTG
Trigger: CCCAGTCCCTGGCCACGCCCAAGGGAAGAGGGAGGT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGCCTGGAGGGTGACATaGGCTGAGCTCTGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKAWRVT*AELWEE
Trigger: TTCCTCCCAGAGCTCAGCCCATGTCACCCTCCAGGC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGAAATGAGGCCACTCTaGATTCTGGGGCCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAEMRPL*ILGPGG
Trigger: CCCTCCAGGCCCCAGAATCCAGAGTGGCCTCATTTC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGAGCAAGACCATCCTTaGGGCTGTGGCTCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: IDYGRPGSHHHLALKIPREQDHP*GCGSPG
Trigger: GCCAGGGGAGCCACAGCCCCAAGGATGGTCTTGCTC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAAAGTCTCCCGAGCCTaGCCTAGGCCTCGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPKVSRA*PRPRLV
Trigger: GACCAGGCGAGGCCTAGGCCAGGCTCGGGAGACTTT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCTGAGCTGCCAGAGATaGGGAAGGGGTCCAGGCACC +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPLSCQR*GRGPGT
Trigger: GGTGCCTGGACCCCTTCCCCATCTCTGGCAGCTCAG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGAGAACAAGCCCAGCTaGGAGGCAGCCAGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMENKPS*EAARGQ
Trigger: CTGCCCTCTGGCTGCCTCCCAGCTGGGCTTGTTCTC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAGAGACAATGGTGGCTaGTCCCTCCGGCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMRDNGG*SLRPSL
Trigger: GAGGCTGGGCCGGAGGGACCAGCCACCATTGTCTCT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCCTAGCCCTAGGCCCTaGCCGGAGACCCAAACATGG +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPPSPRP*PETQTW
Trigger: CCATGTTTGGGTCTCCGGCCAGGGCCTAGGGCTAGG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCACCCATTGGGTGCATaGCCTAGCCCTAGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPHPLGA*PSPRPW
Trigger: CCAGGGCCTAGGGCTAGGCCATGCACCCAATGGGTG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAAGACCCTGTATGATCTaGCCTCAGGCCACCCTGACG +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVARPCMI*PQATLT
Trigger: CGTCAGGGTGGCCTGAGGCCAGATCATACAGGGTCT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCGTGTTTCCTCCCCTGGAGCCTaGCAGCATGCCCTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: EFLAAHALPNVLSMQVRVSSPGA*QHALSS
Trigger: GGAGGACAGGGCATGCTGCCAGGCTCCAGGGGAGGA...AACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp TTGTTCCTGACGCCATTAGCTAGCTTGTCTCCAGCTGGTGGTCTCTGGCCTTCCCAGGGAAGAGATTCCTaGGGGTGTCCACCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: LFLTPLASLSPAGGLWPSQGRDS*GCPPSL
Trigger: GAGGGAGGGTGGACACCCCCAGGAATCTCTTCCCTG...GGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp AAATGCCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCTCCTGGGACGATGCAGTCTGCTCTCAGATTCTaGGCTGCTAGGCTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: KCLSCGVEAAGCPPGTMQSALRF*AARLWR
Trigger: TCTCCAGAGCCTAGCAGCCCAGAATCTGAGAGCAGA...CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CAA 90 bp GCCAAGTTCCAGGCTACCTTGTTGTTCCTGACGCCATTAGCTAGCTaGTCTCCAGCTGGTGGTCTCTGGCCTTCCTCTGGGGACTGTGCT +
Preference number: 2 (lower is better)
Translates to: AKFQATLLFLTPLAS*SPAGGLWPSSGDCA
Trigger: AGCACAGTCCCCAGAGGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAACAAGGTAGCCTGGAACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCAGCAGAGACCCTCTaGGCTGCCAGAGATGGGGAA +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPAAETL*AARDGE
Trigger: TTCCCCATCTCTGGCAGCTCAGAGGGTCTCTGCTGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGAGCCCCAAGTCCATaGGTCTCCGGAACCTCCCTC +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPRAPSP*VSGTSL
Trigger: GAGGGAGGTTCCGGAGACTCATGGACTTGGGGCTCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACAGGACCCTGGAAGCTaGGCTCCCCTATATGGGAAA +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAQDPGS*APLYGK
Trigger: TTTCCCATATAGGGGAGCTCAGCTTCCAGGGTCCTG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGGCCTCAGGCCACCCTaGCGGCCCTGTTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQGLRPP*RPCFPL
Trigger: CAGAGGGAAACAGGGCCGTCAGGGTGGCCTGAGGCC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGGGGCAAGATCAGGCTaGGCCTGGGTGCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLGARSG*AWVQGL
Trigger: CAGACCCTGCACCCAGGCTCAGCCTGATCTTGCCCC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCTGCCCAGGGGCCTCTaGTGCCCCAAGCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLPRGL*CPKLSP
Trigger: GGGGGAGAGCTTGGGGCAGCAGAGGCCCCTGGGCAG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGGACTGCCATGGGGGTaGTGGGGAGCACAGCAATAT +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKGLPWG*WGAQQY
Trigger: ATATTGCTGTGCTCCCCACCACCCCCATGGCAGTCC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACTGAGCTGCCAGAGATaGGGAAGGGGTCCAGGCACC +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSLSCQR*GRGPGT
Trigger: GGTGCCTGGACCCCTTCCCCATCTCTGGCAGCTCAG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCTTGCTCATCTTGCCAGCTGGCACTCTGGCCTCCAAACTaGAAGAAGGACAGGTACTCC +
Preference number: 2 (lower is better)
Translates to: LWDPEPAEGRACSSCQLALWPPN*KKDRYS
Trigger: GGAGTACCTGTCCTTCTTCCAGTTTGGAGGCCAGAG...TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCAGGACCCTGGAAGCTaGGCTCCCCTATATGGGAAA +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKQDPGS*APLYGK
Trigger: TTTCCCATATAGGGGAGCTCAGCTTCCAGGGTCCTG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGATTGCACATGTCAAGGTGTGTACAGAATCTACTGAGGGGAAGATCCCCGGACCTGAGCTGTGGTGTTaGAGCTGCGGGCTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: MIAHVKVCTESTEGKIPGPELWC*SCGLPS
Trigger: GGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGG...TCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGAGCAGGGAAAGGAGGTaGCTCATCCGTCATGGTGGA +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKSRERR*LIRHGG
Trigger: TCCACCATGACGGATGAGGCACCTCCTTTCCCTGCT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGGTTCCAGGGTTCCCTaGAAAGCTCTGGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSGSRVP*KALEAP
Trigger: TGGGGCCTCCAGAGCTTTGCAGGGAACCCTGGAACC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGATGGGGACTGGAGCCTaGTCAGCTTTCACCTTCCAG +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKMGTGA*SAFTFQ
Trigger: CTGGAAGGTGAAAGCTGAGCAGGCTCCAGTCCCCAT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCGTGTTTGGGACCAGGGCCTCTaGTCTCAGATTCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: EFLAAHALPNVLSMQVRVWDQGL*SQILGC
Trigger: GCAGCCCAGAATCTGAGAGCAGAGGCCCTGGTCCCA...AACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGCGGAGGGACTGCCATaGGGGTGGTGGGGAGCACAG +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFAEGLP*GWWGAQ
Trigger: CTGTGCTCCCCACCACCCCCATGGCAGTCCCTCCGC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGCCTGGAGGGTGACATaGGCTGAGCTCTGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSAWRVT*AELWEE
Trigger: TTCCTCCCAGAGCTCAGCCCATGTCACCCTCCAGGC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAAGCGACCCTGCTCCCTaGGTCACAGGAGGCTGGTTA +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSSDPAP*VTGGWL
Trigger: TAACCAGCCTCCTGTGACCCAGGGAGCAGGGTCGCT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGAGAACAAGCCCAGCTaGGAGGCAGCCAGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLENKPS*EAARGQ
Trigger: CTGCCCTCTGGCTGCCTCCCAGCTGGGCTTGTTCTC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGCTGGTTACAAGCATaGGAAGGGAGGAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPSWLQA*EGRRVA
Trigger: GGCCACCCTCCTCCCTTCCCATGCTTGTAACCAGCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCCGGAGACCCAAACATaGCCTCCAAGGGCCAACCTT +
Preference number: 2 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRPETQT*PPRANL
Trigger: AAGGTTGGCCCTTGGAGGCCATGTTTGGGTCTCCGG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATCCCTGGGTGTGGGCTaGGAATGTGTCTTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVASLGVG*ECVFSA
Trigger: TGCTGAAAAGACACATTCCCAGCCCACACCCAGGGA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCCTGGAGCAACCCTGTaGGGAGCTGTAGGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLPGATL*GAVGCP
Trigger: GGGACAGCCTACAGCTCCCCACAGGGTTGCTCCAGG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTATGAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCCTCTGGAGAAGAAGCTaGGCTCCTCCAGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: VMNSWQLMLFPMFCPCRSLWRRS*APPGAG
Trigger: CCCTGCCCCTGGAGGAGCCCAGCTTCTTCTCCAGAG...GGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTCATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGAATGGTGGAAGCGTCTaGAGAACTGGTAGAGGATTC +
Preference number: 2 (lower is better)
Translates to: DALLVGGHCGILSQLKEGNGGSV*RTGRGF
Trigger: GAATCCTCTACCAGTTCTCCAGACGCTTCCACCATT...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CAA 90 bp GAACATAGAGAACCTCCTTCTCTGCTCTGTTGGAACAAAGGCTCCTaGTTCCTAGGGTTCCAGGGTTCCCTGCAAAGCTCTGGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: EHREPPSLLCWNKGS*FLGFQGSLQSSGGP
Trigger: GGGGCCTCCAGAGCTTTGCAGGGAACCCTGGAACCCTAGGAACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGGAGGTTCTCTATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 90 bp AAAGTTGCACTGCACATTCACAAAAAGCCACTCTCCTTGGCTGCATaGGAGACCCTGTATGATCTGGCCTCAGGCCACCCTGACGGCCCT +
Preference number: 2 (lower is better)
Translates to: KVALHIHKKPLSLAA*ETLYDLASGHPDGP
Trigger: AGGGCCGTCAGGGTGGCCTGAGGCCAGATCATACAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTTTGTGAATGTGCAGTGCAACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCTCATGGTGGACTCATTaGAATAAGTCTCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: ACVERSTEKSPEPGLGLASWWTH*NKSPPG
Trigger: CCCTGGAGGAGACTTATTTCAATGAGTCCACCATGA...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGAGGGTGACATGGGCTaGGCTCTGGGAGGAAAGTCA +
Preference number: 2 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSEGDMG*ALGGKS
Trigger: TGACTTTCCTCCCAGAGCTCAGCCCATGTCACCCTC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGCAGCAGAGACCCTCTaGGCTGCCAGAGATGGGGAA +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLAAETL*AARDGE
Trigger: TTCCCCATCTCTGGCAGCTCAGAGGGTCTCTGCTGC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAGCCAGAGGGCAGGATaGGGGGATTTCCCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPSQRAG*GDFPGE
Trigger: CTCCCCTGGGAAATCCCCTCATCCTGCCCTCTGGCT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATGGAGCAAAGAGGGATaGAGCCTGCCACACTGCAGG +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSWSKEG*SLPHCR
Trigger: CCTGCAGTGTGGCAGGCTTCATCCCTCTTTGCTCCA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp TCTTGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATGCCCTGCTTGTAGGAGCAGGGAAAGGAGGTaGCTCATCCGTCATGGTGGA +
Preference number: 2 (lower is better)
Translates to: SCRLHLDAFSEPGCPACRSRERR*LIRHGG
Trigger: TCCACCATGACGGATGAGGCACCTCCTTTCCCTGCT...CCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCCCAGGGGCCTCTGCTaGCCCAAGCTCTCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQPRGLC*PKLSPR
Trigger: TCTGGGGGAGAGCTTGGGGCAGCAGAGGCCCCTGGG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGGTTCCAGGGTTCCCTaGAAAGCTCTGGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLGSRVP*KALEAP
Trigger: TGGGGCCTCCAGAGCTTTGCAGGGAACCCTGGAACC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGTCACATGTCATAACTaGAGCCCACAACCCAGACCC +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKVTCHN*SPQPRP
Trigger: GGGTCTGGGTTGTGGGCTGCAGTTATGACATGTGAC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACCGACCCTCCAGTCCTaGTCCTTCCAACCCCGACAC +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKPTLQS*SFQPRH
Trigger: GTGTCGGGGTTGGAAGGAGCAGGACTGGAGGGTCGG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGCAACCTCAGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLATSAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGGTTGC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp TTGTTCCTGACGCCATTAGCTAGCTTGTCTCCAGCTGGTGGTCTCTGGCCTTCCATCTCAGGTCTACCCTaGAGCAGGGAACAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: LFLTPLASLSPAGGLWPSISGLP*SREQCL
Trigger: GAGACACTGTTCCCTGCTCCAGGGTAGACCTGAGAT...GGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGGCCTAGGCCTCGCCTaGTCGCCAGCCTCCGTCCCA +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKGLGLA*SPASVP
Trigger: TGGGACGGAGGCTGGCGACCAGGCGAGGCCTAGGCC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGAGACAATGGTGGCTaGTCCCTCCGGCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICRDNGG*SLRPSL
Trigger: GAGGCTGGGCCGGAGGGACCAGCCACCATTGTCTCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCCTTCCAGCGTTACCTaGAGCAACCCTGTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLPSSVT*SNPVGS
Trigger: GCTCCCCACAGGGTTGCTCCAGGTAACGCTGGAAGG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGGAAGAAGGACAGGTACTCCTCAGCCACAGCCCTGCTAAAGTCATTGTTCTTTTCCTCGCCTGGTTTTaGGGCCTCCCCTGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: LEEGQVLLSHSPAKVIVLFLAWF*GLPCLL
Trigger: AAGGAGGCAGGGGAGGCCCCAAAACCAGGCGAGGAA...AAGAACAATGACTTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CAA 90 bp AAAGCTTCAGGGAGCACAAGAATGAGGGCCACAGGGAAACAAGGTTaGTCCTTCAGCAGGGAAAGGAGGTGCCTCATCCGTCATGGTGGA +
Preference number: 2 (lower is better)
Translates to: KASGSTRMRATGKQG*SFSRERRCLIRHGG
Trigger: TCCACCATGACGGATGAGGCACCTCCTTTCCCTGCTGAAGGACAAACCTTGTTTCCCTGTGGCCCTCATTCTTGTGCTCCCTGAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 90 bp CTGCCTGACCTCCCTTCCTCACACACTGACACACCTCCCTCTTTGTaGACCTGTTATTTATTGTGCACCCATTGGGTGCATGGCCTAGCC +
Preference number: 2 (lower is better)
Translates to: LPDLPSSHTDTPPSL*TCYLLCTHWVHGLA
Trigger: GGCTAGGCCATGCACCCAATGGGTGCACAATAAATAACAGGTCAACAAAGAGGGAGGTGTGTCAGTGTGTGAGGAAGGGAGGTCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GTCTTCTTCATCCACGGCCCACTCGAGCTTCTCGCTGCGGATAGACCAGTAGAGTCATGGTGGACTCATTaGAATAAGTCTCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: VFFIHGPLELLAADRPVESWWTH*NKSPPG
Trigger: CCCTGGAGGAGACTTATTTCAATGAGTCCACCATGA...CTCTACTGGTCTATCCGCAGCGAGAAGCTCGAGTGGGCCGTGGATGAAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGAGCCCCAAGTCCATaGGTCTCCGGAACCTCCCTC +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICRAPSP*VSGTSL
Trigger: GAGGGAGGTTCCGGAGACTCATGGACTTGGGGCTCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGACTTGCACACTTGGCTaGACAGAGACAATGGTGGCT +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKTCTLG*TETMVA
Trigger: AGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGGCAGGAGAATCGCTTaGTTCAGTGGAGGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRGRRIA*FSGGCS
Trigger: ACTGCAACCTCCACTGAATCAAGCGATTCTCCTGCC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATGGGTTTTACGAAGTTaGAGGTCCTGGTTCGGTGAT +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAWVLRS*RSWFGD
Trigger: ATCACCGAACCAGGACCTTCAACTTCGTAAAACCCA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCTCAGCTGAGATCATaGGAGCCCAGGAAGCAGTTA +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPAQLRS*EPRKQL
Trigger: TAACTGCTTCCTGGGCTCTCATGATCTCAGCTGAGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAGCCAGTGTGCCGGCTaGGGGGAACAGTTGGTCACA +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQSQCAG*GEQLVT
Trigger: TGTGACCAACTGTTCCCCTCAGCCGGCACACTGGCT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACCCAGGGGCCTCTGCTaGCCCAAGCTCTCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKPRGLC*PKLSPR
Trigger: TCTGGGGGAGAGCTTGGGGCAGCAGAGGCCCCTGGG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTCTTCTTCATCCACGGCCCACTCGAGCTTCTCGCTGCGGATAGACCAGTAGAGATTCCTGGCAGCTCATaGTCTTCCCAATGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: VFFIHGPLELLAADRPVEIPGSS*SSQCSV
Trigger: GACAGAACATTGGGAAGAGCATGAGCTGCCAGGAAT...CTCTACTGGTCTATCCGCAGCGAGAAGCTCGAGTGGGCCGTGGATGAAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGGCCACTCTGGATTCTaGGGCCTGGAGGGTGACATG +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPGHSGF*GLEGDM
Trigger: CATGTCACCCTCCAGGCCCCAGAATCCAGAGTGGCC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGAGCAAGACCATCCTTaGGGCTGTGGCTCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSEQDHP*GCGSPG
Trigger: GCCAGGGGAGCCACAGCCCCAAGGATGGTCTTGCTC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCTCTATCCTCTCCAGTaGTCTGAACATAGAGAACCT +
Preference number: 2 (lower is better)
Translates to: ACVERSTEKSPEPGLGLALYPLQ*SEHREP
Trigger: AGGTTCTCTATGTTCAGACCACTGGAGAGGATAGAG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGAACAGAGACAATGGTaGCTGGTCCCTCCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPEQRQW*LVPPAQ
Trigger: CTGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCACCCATTGGGTGCATaGCCTAGCCCTAGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSHPLGA*PSPRPW
Trigger: CCAGGGCCTAGGGCTAGGCCATGCACCCAATGGGTG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAGAGGCTTCCCTAGATaGTGGGAGTCCTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPRGFPR*WESWPR
Trigger: CCTGGGCCAGGACTCCCACCATCTAGGGAAGCCTCT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGAGGCTTCCCTAGATaGTGGGAGTCCTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICRGFPR*WESWPR
Trigger: CCTGGGCCAGGACTCCCACCATCTAGGGAAGCCTCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTCCCACTCAAGGGCCTaGCCACTGGGGCAAGATCAG +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICSHSRA*PLGQDQ
Trigger: CTGATCTTGCCCCAGTGGCCAGGCCCTTGAGTGGGA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCTTGCTCATCTTGCCAGCTGGCATTGGTTATGAATTCCTaGCAGCTCATGCTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LWDPEPAEGRACSSCQLALVMNS*QLMLFP
Trigger: TGGGAAGAGCATGAGCTGCCAGGAATTCATAACCAA...TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTTTCTCAAGAGTCCCTaGTTCACTCTCCTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSFLKSP*FTLLGP
Trigger: AGGCCCCAGGAGAGTGAATCAGGGACTCTTGAGAAA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGAGCAGTTGGGTATGTaGGACTGTTTCATCTACTTC +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAEQLGM*DCFIYF
Trigger: GAAGTAGATGAAACAGTCTCACATACCCAACTGCTC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGTCCCCATAGACTTCTaGGATGTCTTTCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAVPIDF*DVFLSL
Trigger: GAGAGAAAGAAAGACATCTCAGAAGTCTATGGGGAC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGATTGGAGACCCTGTATaGTCTGGCCTCAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPIGDPV*SGLRPP
Trigger: GGGTGGCCTGAGGCCAGATCATACAGGGTCTCCAAT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGGGCATCAGAAAAGCTaGGGGGCAGAGGTGTTGGCA +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICGHQKS*GAEVLA
Trigger: TGCCAACACCTCTGCCCCTCAGCTTTTCTGATGCCC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGAGCAGGGAAAGGAGGTaGCTCATCCGTCATGGTGGA +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSRERR*LIRHGG
Trigger: TCCACCATGACGGATGAGGCACCTCCTTTCCCTGCT...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCTTACTTTGTGGAGGTaGAAGCCCCAGAGCTGGTTA +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPLTLWR*KPQSWL
Trigger: TAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGCAGGTGGTCCTAGCTaGCTGACCTCCCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFAGGPS*LTSLPH
Trigger: GTGAGGAAGGGAGGTCAGGCAGCTAGGACCACCTGC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGAAGAGGAGCCAGTGTaGCGGCTGAGGGGAACAGTT +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICEEEPV*RLRGTV
Trigger: AACTGTTCCCCTCAGCCGGCACACTGGCTCCTCTTC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATCGGGAGGCAGAGCTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKSGGRA*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAAGCTCTGCCTCCCGA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAGCGACCCTGCTCCCTaGGTCACAGGAGGCTGGTTA +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFSDPAP*VTGGWL
Trigger: TAACCAGCCTCCTGTGACCCAGGGAGCAGGGTCGCT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGAACAGAGACAATGGTaGCTGGTCCCTCCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSEQRQW*LVPPAQ
Trigger: CTGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGCAGAGGCCCCCTCTTaGCGGGCAGCCTACTTGCAC +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKAEAPS*RAAYLH
Trigger: GTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACAGCATCCCTGGGTGTaGGCTGGGAATGTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSQHPWV*AGNVSF
Trigger: AAAAGACACATTCCCAGCCCACACCCAGGGATGCTG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTCAGGAGTAACAACCTaGGTCACAGCAGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSGVTT*VTAGPG
Trigger: TCCTGGGCCTGCTGTGACCCAGGTTGTTACTCCTGA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGTGATCCCAATGCTTTaGGAGGCCGAGGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPVIPML*EAEAAG
Trigger: TCCAGCTGCCTCGGCCTCCCAAAGCATTGGGATCAC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGCTGGTGAGGGGGCATaGGCATCAGAAAAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICAGEGA*ASEKLR
Trigger: CCTCAGCTTTTCTGATGCCCATGCCCCCTCACCAGC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACTCAAAGAGCCCCAGTaGGCCCATGAAGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKLKEPQ*AHEGER
Trigger: CCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp TTGTTCCTGACGCCATTAGCTAGCTTGTCTCCAGCTGGTGGTCTCTGGCCTTCCCATCTAGTGTCCACTTaGGCAAAATGCCTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: LFLTPLASLSPAGGLWPSHLVST*AKCLSC
Trigger: ACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATG...GGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CAA 90 bp ACACAGACACAGACACTACACACATGCACAGACACACATACACACTaGGAGCAAAGAGGGATGAAGCCTGCCACACTGCAGGTGGTCCTA +
Preference number: 2 (lower is better)
Translates to: TQTQTLHTCTDTHTH*EQRGMKPATLQVVL
Trigger: TAGGACCACCTGCAGTGTGGCAGGCTTCATCCCTCTTTGCTCCAAGTGTGTATGTGTGTCTGTGCATGTGTGTAGTGTCTGTGTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGAGGGTGACATGGGCTaGGCTCTGGGAGGAAAGTCA +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFEGDMG*ALGGKS
Trigger: TGACTTTCCTCCCAGAGCTCAGCCCATGTCACCCTC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACACCTCCCTCTTTGTTaGCCTGTTATTTATTGTGCA +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAHLPLC*PVIYCA
Trigger: TGCACAATAAATAACAGGTCAACAAAGAGGGAGGTG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTGGAGCAAAGAGGGATaGAGCCTGCCACACTGCAGG +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFWSKEG*SLPHCR
Trigger: CCTGCAGTGTGGCAGGCTTCATCCCTCTTTGCTCCA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAAGGCCAAAGGTCGCTaGGAGGTGATGGCGGAAGAA +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPKAKGR*EVMAEE
Trigger: TTCTTCCGCCATCACCTCTCAGCGACCTTTGGCCTT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGCAGGATGGCATGCATaGGGGCAGAGCCTAAGCCAG +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQAGWHA*GQSLSQ
Trigger: CTGGCTTAGGCTCTGCCCTCATGCATGCCATCCTGC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGGAAGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTTCC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCCCAGCCCTCACTCATaGCATCAGCTCTGCTCTGTT +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICPSPHS*HQLCSV
Trigger: AACAGAGCAGAGCTGATGGCATGAGTGAGGGCTGGG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGAGAACCTCCTTCTCTaGTCTGTTGGAACAAAGGCT +
Preference number: 2 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMENLLL*SVGTKA
Trigger: AGCCTTTGTTCCAACAGAGCAGAGAAGGAGGTTCTC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGAGAACCTCCTTCTCTaGTCTGTTGGAACAAAGGCT +
Preference number: 2 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRENLLL*SVGTKA
Trigger: AGCCTTTGTTCCAACAGAGCAGAGAAGGAGGTTCTC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGCAGGTGGTCCTAGCTaGCTGACCTCCCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQAGGPS*LTSLPH
Trigger: GTGAGGAAGGGAGGTCAGGCAGCTAGGACCACCTGC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAAGAGGGATGAAGCCTaGCACACTGCAGGTGGTCCT +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKKRDEA*HTAGGP
Trigger: AGGACCACCTGCAGTGTGGCAGGCTTCATCCCTCTT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAATGGGGACTGGAGCCTaGTCAGCTTTCACCTTCCAG +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQMGTGA*SAFTFQ
Trigger: CTGGAAGGTGAAAGCTGAGCAGGCTCCAGTCCCCAT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATTTTATCTACCCTGGTaGCTGGCAAGCAACAAACAA +
Preference number: 2 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAFYLPW*LASNKQ
Trigger: TTGTTTGTTGCTTGCCAGGCACCAGGGTAGATAAAA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTCGGGAGGCAGAGCTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSSGGRA*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAAGCTCTGCCTCCCGA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGGACTGCCATGGGGGTaGTGGGGAGCACAGCAATAT +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFGLPWG*WGAQQY
Trigger: ATATTGCTGTGCTCCCCACCACCCCCATGGCAGTCC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGGCCACTCTGGATTCTaGGGCCTGGAGGGTGACATG +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQGHSGF*GLEGDM
Trigger: CATGTCACCCTCCAGGCCCCAGAATCCAGAGTGGCC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGAAATGAGGCCACTCTaGATTCTGGGGCCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSEMRPL*ILGPGG
Trigger: CCCTCCAGGCCCCAGAATCCAGAGTGGCCTCATTTC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCTGAATCAGCATCCCTaGGTGTGGGCTGGGAATGTG +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICLNQHP*VWAGNV
Trigger: CACATTCCCAGCCCACACCCAGGGATGCTGATTCAG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTGTAAGCATCAGTCTTaGGCCAAAAGTCATGTCCAC +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKCKHQS*AKSHVH
Trigger: GTGGACATGACTTTTGGCCCAAGACTGATGCTTACA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACCTGGAGCAACCCTGTaGGGAGCTGTAGGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKPGATL*GAVGCP
Trigger: GGGACAGCCTACAGCTCCCCACAGGGTTGCTCCAGG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGTTCCATACCTAGGATaGGGACTGGAGCCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKVPYLG*GLEPAQ
Trigger: CTGAGCAGGCTCCAGTCCCCATCCTAGGTATGGAAC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTCAGACATAGGCCTGTaGTGGTTTGATCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKSDIGL*WFDLFH
Trigger: ATGGAACAGATCAAACCACCACAGGCCTATGTCTGA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGCTGAGGGGAACAGTTaGTCACAGGCTTGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQAEGNS*SQACGE
Trigger: CTCTCCACAAGCCTGTGACCAACTGTTCCCCTCAGC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGGGCTGGGAACAGTTaGCAAAGCCCACACATACCG +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKRAGNS*QSPHIP
Trigger: CGGTATGTGTGGGCTTTGCCAACTGTTCCCAGCCCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTATGAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCATCCCCGGATTGCAATaGTGGAAGCGTCTGGAGAAC +
Preference number: 2 (lower is better)
Translates to: VMNSWQLMLFPMFCPCRSIPGLQ*WKRLEN
Trigger: GTTCTCCAGACGCTTCCACCATTGCAATCCGGGGAT...GGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTCATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGGCAGGAGAATCGCTTaGTTCAGTGGAGGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICGRRIA*FSGGCS
Trigger: ACTGCAACCTCCACTGAATCAAGCGATTCTCCTGCC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGGGCATCAGAAAAGCTaGGGGGCAGAGGTGTTGGCA +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQGHQKS*GAEVLA
Trigger: TGCCAACACCTCTGCCCCTCAGCTTTTCTGATGCCC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAAGGCCAAAGGTCGCTaGGAGGTGATGGCGGAAGAA +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSKAKGR*EVMAEE
Trigger: TTCTTCCGCCATCACCTCTCAGCGACCTTTGGCCTT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGAGGTTGCAGTGAATTaGGATCGTGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPEVAVN*DRATAL
Trigger: GAGTGCAGTGGCACGATCTCAATTCACTGCAACCTC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGATTGCACATGTCAAGGTGTGTACAGAATCTACTGAGGGGAAGATCCCCGGACTTGGGCAAAATGCCTaGGCTGTGGTGTTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: MIAHVKVCTESTEGKIPGLGQNA*AVVLKL
Trigger: CAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAG...TCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAAGAGGGATGAAGCCTaGCACACTGCAGGTGGTCCT +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFKRDEA*HTAGGP
Trigger: AGGACCACCTGCAGTGTGGCAGGCTTCATCCCTCTT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTGTGACTCCTGCATATaGATGAACACACAGACACAG +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPCDSCI*MNTQTQ
Trigger: CTGTGTCTGTGTGTTCATGCATATGCAGGAGTCACA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGTCACATGTCATAACTaGAGCCCACAACCCAGACCC +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPVTCHN*SPQPRP
Trigger: GGGTCTGGGTTGTGGGCTGCAGTTATGACATGTGAC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCACATAATAACTTCCTaGCTTTCAGGGAGCACAGCT +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPHIITS*LSGSTA
Trigger: AGCTGTGCTCCCTGAAAGGCAGGAAGTTATTATGTG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCCAAGCAGGATGGCATaGATGAGGGCAGAGCCTAAG +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSPSRMA*MRAEPK
Trigger: CTTAGGCTCTGCCCTCATGCATGCCATCCTGCTTGG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATGGGTCACAGGAGGCTaGTTAGGAATTTCTCAAGAG +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSWVTGG*LGISQE
Trigger: CTCTTGAGAAATTCCTAACCAGCCTCCTGTGACCCA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTGCAAGCCCCAGAGCTaGTTACAAGCATGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFCKPQS*LQAWEG
Trigger: CCCTTCCCATGCTTGTAACCAGCTCTGGGGCTTGCA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGAGCAGGAAACCAGTaGGCAAGATTGTCAACTCAT +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPRAGNQ*ARLSTH
Trigger: ATGAGTTGACAATCTTGCCCACTGGTTTCCTGCTCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTCTTTTTATCTACCCTaGTGCCTGGCAAGCAACAAA +
Preference number: 2 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKSFYLP*CLASNK
Trigger: TTTGTTGCTTGCCAGGCACCAGGGTAGATAAAAAGA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCAGGCAAAGGTGGGGTaGACGCCGATTTGTAAGGTG +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSQAKVG*TPICKV
Trigger: CACCTTACAAATCGGCGTCCACCCCACCTTTGCCTG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACATAGGCCTGGGAGATaGAGCCCCCAAAAGAACAAG +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKHRPGR*SPQKNK
Trigger: CTTGTTCTTTTGGGGGCTCCATCTCCCAGGCCTATG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCGTGTTTTTCTTCAAGGAACTTaGCTGTTCCCCATCCGTCTC +
Preference number: 2 (lower is better)
Translates to: EFLAAHALPNVLSMQVRVFLQGT*LFPIRL
Trigger: GAGACGGATGGGGAACAGCCAAGTTCCTTGAAGAAA...AACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CAA 90 bp TCCAGAAACTATCTTGAAAGCCCAGCAGTCAGCCAGGTAAGATCTTaGAGGCTACATAGTTTAGGGGTGGGAAGAGCAAGAGGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: SRNYLESPAVSQVRS*RLHSLGVGRARGSS
Trigger: GCTACTCCCTCTTGCTCTTCCCACCCCTAAACTATGTAGCCTCAAAGATCTTACCTGGCTGACTGCTGGGCTTTCAAGATAGTTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGCAAGTCTAGGAAATaGGGCCACTCTGGATTCTGG +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICSKSRK*GHSGFW
Trigger: CCAGAATCCAGAGTGGCCTCATTTCCTAGACTTGCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAACTTGCACACTTGGCTaGACAGAGACAATGGTGGCT +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKTCTLG*TETMVA
Trigger: AGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGGTGCCGGTTCTACATaGGCAAAGGAGCATCAAAGT +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKGAGST*AKEHQS
Trigger: ACTTTGATGCTCCTTTGCTCATGTAGAACCGGCACC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGGTGCCGGTTCTACATaGGCAAAGGAGCATCAAAGT +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQGAGST*AKEHQS
Trigger: ACTTTGATGCTCCTTTGCTCATGTAGAACCGGCACC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAAGGTCCTGGTTCGGTaGTGGCACAGGGGCACACAT +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKKVLVR*WHRGTH
Trigger: ATGTGTGCCCCTGTGCCATCACCGAACCAGGACCTT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGTTGGCTCACGCCTGTaGTCCCAATGCTTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKVGSRL*SQCFGR
Trigger: CCTCCCAAAGCATTGGGATCACAGGCGTGAGCCAAC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCTGTCCTCCAAGCCCTaGGCTTGGCACTCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQLSSKP*AWHSSL
Trigger: AAGAGAAGAGTGCCAAGCTCAGGGCTTGGAGGACAG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTTGCAGGCCATATTCTaGCCCTACCCATTGGCCTTA +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICLQAIF*PYPLAL
Trigger: TAAGGCCAATGGGTAGGGTCAGAATATGGCCTGCAA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGTTGCAGGCCATATTCTaGCCCTACCCATTGGCCTTA +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPLQAIF*PYPLAL
Trigger: TAAGGCCAATGGGTAGGGTCAGAATATGGCCTGCAA...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAATGGCGGAAGAAGGCTaGGAAGGCATCAGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQMAEEG*EGIRVD
Trigger: ATCAACTCTGATGCCTTCTCAGCCTTCTTCCGCCAT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAAGGTCGCTGAGAGGTaGTGGCGGAAGAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKKVAER*WRKKAE
Trigger: CTCAGCCTTCTTCCGCCATCACCTCTCAGCGACCTT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGAGAGGCAAAAAGAAATaGAGAGGGCCGGGGCGTGGT +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQRGKKK*RGPGRG
Trigger: ACCACGCCCCGGCCCTCTTCATTTCTTTTTGCCTCT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCCCAGCCCTCACTCATaGCATCAGCTCTGCTCTGTT +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQPSPHS*HQLCSV
Trigger: AACAGAGCAGAGCTGATGGCATGAGTGAGGGCTGGG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCTTACTTTGTGGAGGTaGAAGCCCCAGAGCTGGTTA +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPLTLWR*KPQSWL
Trigger: TAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTTTTATCTACCCTGGTaGCTGGCAAGCAACAAACAA +
Preference number: 2 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPFYLPW*LASNKQ
Trigger: TTGTTTGTTGCTTGCCAGGCACCAGGGTAGATAAAA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTTACCCAGGCTGGAGTaGAATGGCGCAACCTCAGCT +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQLPRLE*NGATSA
Trigger: AGCTGAGGTTGCGCCATTGCACTCCAGCCTGGGTAA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGGAGGAAAAAGGACCTaGTACGGCCAGGTTTTCACA +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICGGKRT*YGQVFT
Trigger: TGTGAAAACCTGGCCGTAGCAGGTCCTTTTTCCTCC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGACTGCAGCCATCAATTaGCCTAGGAGGTGCCATTTC +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPTAAIN*PRRCHF
Trigger: GAAATGGCACCTCCTAGGGCAATTGATGGCTGCAGT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCTCTGGGCTGTGTCCTaGAGGAAGATCCAAGGTGGT +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQLWAVS*RKIQGG
Trigger: ACCACCTTGGATCTTCCTGCAGGACACAGCCCAGAG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp TCTTGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATGCCCTGCTTGTAGGCAGATTCTCATGTTCTaGAGAAGTCAGGTGAATGTC +
Preference number: 2 (lower is better)
Translates to: SCRLHLDAFSEPGCPACRQILMF*RSQVNV
Trigger: GACATTCACCTGACTTCTGCAGAACATGAGAATCTG...CCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCCTTCTCTGCTCTGTTaGAACAAAGGCTCCTTGTTC +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLPSLLC*NKGSLF
Trigger: GAACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCCTAGCCCTAGGCCCTaGCCGGAGACCCAAACATGG +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEPSPRP*PETQTW
Trigger: CCATGTTTGGGTCTCCGGCCAGGGCCTAGGGCTAGG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCTGAATCAGCATCCCTaGGTGTGGGCTGGGAATGTG +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQLNQHP*VWAGNV
Trigger: CACATTCCCAGCCCACACCCAGGGATGCTGATTCAG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATCTCCTTGGCTGCATTaGAGACCCTGTATGATCTGG +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQSPWLH*RPCMIW
Trigger: CCAGATCATACAGGGTCTCCAATGCAGCCAAGGAGA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAAAAGCCACTCTCCTTaGCTGCATTGGAGACCCTGT +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKKSHSP*LHWRPC
Trigger: ACAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 90 bp CGGCCCAAGGCAGGCTGCTACAGGAGACTATTCCTGGATTTGAGTTaGAAACTTCCAGGAAGCAGAGAGTCACTTTCTGCTATATTTGCA +
Preference number: 2 (lower is better)
Translates to: RPKAGCYRRLFLDLS*KLPGSRESLSAIFA
Trigger: TGCAAATATAGCAGAAAGTGACTCTCTGCTTCCTGGAAGTTTCAAACTCAAATCCAGGAATAGTCTCCTGTAGCAGCCTGCCTTGGGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGTTTCTCAAGAGTCCCTaGTTCACTCTCCTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLFLKSP*FTLLGP
Trigger: AGGCCCCAGGAGAGTGAATCAGGGACTCTTGAGAAA...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATCCACTTCAATCAAATaGGGCAATTGGACTCTACTG +
Preference number: 2 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSSTSIK*GNWTLL
Trigger: CAGTAGAGTCCAATTGCCTCATTTGATTGAAGTGGA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGTGGGTTTTACGAAGTTaGAGGTCCTGGTTCGGTGAT +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPWVLRS*RSWFGD
Trigger: ATCACCGAACCAGGACCTTCAACTTCGTAAAACCCA...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGCCCACACATACCGTaGATTCATCACAGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICSPHIP*IHHRKQ
Trigger: CTGCTTTCTGTGATGAATTCACGGTATGTGTGGGCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGCAGGGTCTGGTAGATaGTCACATAGCTATCAAGGC +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSAGSGR*SHSYQG
Trigger: GCCTTGATAGCTATGTGATCATCTACCAGACCCTGC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACAAGAAAATGGATCTTaGGAGTTCCTGGGGCCATCT +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKQENGS*EFLGPS
Trigger: AGATGGCCCCAGGAACTCTCAAGATCCATTTTCTTG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATCATGCCATCAGCTCTaGTCTGTTGATGAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKSCHQL*SVDEQL
Trigger: CAACTGCTCATCAACAGAGCAGAGCTGATGGCATGA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTCATGCCATCAGCTCTaGTCTGTTGATGAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICSCHQL*SVDEQL
Trigger: CAACTGCTCATCAACAGAGCAGAGCTGATGGCATGA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAGAAAGATGCAAGCCTaGCTCCAAGTGGTCACATGT +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPRKMQA*LQVVTC
Trigger: ACATGTGACCACTTGGAGGCAGGCTTGCATCTTTCT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAGGAAAAAGGACCTaGTACGGCCAGGTTTTCACA +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSGGKRT*YGQVFT
Trigger: TGTGAAAACCTGGCCGTAGCAGGTCCTTTTTCCTCC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCAAGGCAGAGCCAAGTaGAAAGCTACCCAGCATCCA +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQQGRAK*KATQHP
Trigger: TGGATGCTGGGTAGCTTTGCACTTGGCTCTGCCTTG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGGAGGAAAGGGCATCTaGATATTAGTCGGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLGGKGI*ILVGFL
Trigger: GAGAAAACCGACTAATATGCAGATGCCCTTTCCTCC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAACAGGGAGTTTATGTTaGTCTGGAAGCAGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQTGSLC*SGSREA
Trigger: TGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCCTTCTCTGCTCTGTTaGAACAAAGGCTCCTTGTTC +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPPSLLC*NKGSLF
Trigger: GAACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGCCTACTTGCACACTTaGCTGAACAGAGACAATGGT +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQAYLHT*LNRDNG
Trigger: ACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTTATTGTGCACCCATTaGGTGCATGGCCTAGCCCTA +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLLCTH*VHGLAL
Trigger: TAGGGCTAGGCCATGCACCCAATGGGTGCACAATAA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAAGCCTGCCTCCAAGTaGTCACATGTCATAACTGCA +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQKPASK*SHVITA
Trigger: TGCAGTTATGACATGTGACCACTTGGAGGCAGGCTT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCAGGCCCAGGACCCTaGAAGCTGAGCTCCCCTATA +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEAGPGP*KLSSPI
Trigger: TATAGGGGAGCTCAGCTTCCAGGGTCCTGGGCCTGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGTAATCCCAGCTACTTaGGAGGCTGGGAAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSVIPAT*EAGKGE
Trigger: TTCTCCTTTCCCAGCCTCCCAAGTAGCTGGGATTAC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGCCAGGGTCAGCTATaGAAAGCAAGAGAGTCTAAC +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICSQGQL*KARESN
Trigger: GTTAGACTCTCTTGCTTTCCATAGCTGACCCTGGCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGAGAGCCAGGTATGAATaGGAACCTGGTAAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQRARYE*EPGKGW
Trigger: CCAGCCCTTACCAGGTTCCCATTCATACCTGGCTCT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCATAGGCCTGGGAGATaGAGCCCCCAAAAGAACAAG +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQHRPGR*SPQKNK
Trigger: CTTGTTCTTTTGGGGGCTCCATCTCCCAGGCCTATG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTCATGGTGGACTCATTaGAATAAGTCTCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSSWWTH*NKSPPG
Trigger: CCCTGGAGGAGACTTATTTCAATGAGTCCACCATGA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGAGCAGTTGGGTATGTaGGACTGTTTCATCTACTTC +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICEQLGM*DCFIYF
Trigger: GAAGTAGATGAAACAGTCTCACATACCCAACTGCTC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAACCATCATCTGGCTCTaGAGATTCCACGTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKTIIWL*RFHVLR
Trigger: CCTGAGCACGTGGAATCTTCAGAGCCAGATGATGGT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCCATTCAAGAAACCTTaGGGATCTGTGAGCATGCCT +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSPFKKP*GSVSMP
Trigger: AGGCATGCTCACAGATCCTCAAGGTTTCTTGAATGG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTACCTGTTATTTATTGTaGACCCATTGGGTGCATGGC +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICTCYLL*THWVHG
Trigger: GCCATGCACCCAATGGGTGCACAATAAATAACAGGT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGACCTGTTATTTATTGTaGACCCATTGGGTGCATGGC +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPTCYLL*THWVHG
Trigger: GCCATGCACCCAATGGGTGCACAATAAATAACAGGT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATGTGACTCCTGCATATaGATGAACACACAGACACAG +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKCDSCI*MNTQTQ
Trigger: CTGTGTCTGTGTGTTCATGCATATGCAGGAGTCACA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCAGAAGCTAGAAAGATaGAAGCCTGCCTCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQQKLER*KPASKW
Trigger: CCACTTGGAGGCAGGCTTGCATCTTTCTAGCTTCTG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCACATAATAACTTCCTaGCTTTCAGGGAGCACAGCT +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICHIITS*LSGSTA
Trigger: AGCTGTGCTCCCTGAAAGGCAGGAAGTTATTATGTG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGAATTGCCCTAGGAGGTaGCATTTCAGGCAAAGGTGG +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQNCPRR*HFRQRW
Trigger: CCACCTTTGCCTGAAATGGCACCTCCTAGGGCAATT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGTGCCACTGCACTCCTaGCTGAAAAAGAATATGCAA +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICVPLHS*LKKNMQ
Trigger: TTGCATATTCTTTTTCAGGCAGGAGTGCAGTGGCAC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAATCTCAGGTCTACCCTaGAGCAGGGAACAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKISGLP*SREQCL
Trigger: GAGACACTGTTCCCTGCTCCAGGGTAGACCTGAGAT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAACATGGGCTGAGCTCTaGGAGGAAAGTCAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKTWAEL*EESQVL
Trigger: GAGGACTTGACTTTCCTCCCAGAGCTCAGCCCATGT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCTCTATCCTCTCCAGTaGTCTGAACATAGAGAACCT +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICLYPLQ*SEHREP
Trigger: AGGTTCTCTATGTTCAGACCACTGGAGAGGATAGAG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGCCTACTTGCACACTTaGCTGAACAGAGACAATGGT +
Preference number: 2 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFAYLHT*LNRDNG
Trigger: ACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGAGCTGGTTACAAGCATaGGAAGGGAGGAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHESWLQA*EGRRVA
Trigger: GGCCACCCTCCTCCCTTCCCATGCTTGTAACCAGCT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGTTATTGTGCACCCATTaGGTGCATGGCCTAGCCCTA +
Preference number: 2 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLLLCTH*VHGLAL
Trigger: TAGGGCTAGGCCATGCACCCAATGGGTGCACAATAA...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATCCCTGGGTGTGGGCTaGGAATGTGTCTTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSLGVG*ECVFSA
Trigger: TGCTGAAAAGACACATTCCCAGCCCACACCCAGGGA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGATCTACCCTGGTGCCTaGCAAGCAACAAACAAATAT +
Preference number: 2 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLIYPGA*QATNKY
Trigger: ATATTTGTTTGTTGCTTGCCAGGCACCAGGGTAGAT...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGATCTTGAGAGTTCCTaGGGCCATCTTGGAAGCATG +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQDLESS*GHLGSM
Trigger: CATGCTTCCAAGATGGCCCCAGGAACTCTCAAGATC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGCAAGTCTAGGAAATaGGGCCACTCTGGATTCTGG +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSKSRK*GHSGFW
Trigger: CCAGAATCCAGAGTGGCCTCATTTCCTAGACTTGCT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACACCTCCCTCTTTGTTaGCCTGTTATTTATTGTGCA +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKHLPLC*PVIYCA
Trigger: TGCACAATAAATAACAGGTCAACAAAGAGGGAGGTG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGAGCAAGTAGGTGAATaGATGATTCTGAGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSEQVGE*MILRSP
Trigger: AGGAGACCTCAGAATCATTCATTCACCTACTTGCTC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTTCCACGTGCTCAGGTaGAAGAGAGGTGCCGGTTCT +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEFHVLR*KRGAGS
Trigger: AGAACCGGCACCTCTCTTTCACCTGAGCACGTGGAA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATGCCAGGCATTGTTCTaGGATGTTTACGTGCATAAT +
Preference number: 2 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKCQALF*DVYVHN
Trigger: ATTATGCACGTAAACATCTCAGAACAATGCCTGGCA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTTCAAAGCAAACGGATaGCCTCAAGCCATCGCAGAA +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQFKANG*PQAIAE
Trigger: TTCTGCGATGGCTTGAGGTCATCCGTTTGCTTTGAA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACCAAGATCACACCATTaGACTCCAGCCTGGGTTACA +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKPRSHH*TPAWVT
Trigger: TGTAACCCAGGCTGGAGTGCAATGGTGTGATCTTGG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAACAATCCCAGTTCCTaGCCACAGGGAGTTTATGTT +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSNNPSS*PQGVYV
Trigger: AACATAAACTCCCTGTGGGCAGGAACTGGGATTGTT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTGCAAGCCCCAGAGCTaGTTACAAGCATGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHECKPQS*LQAWEG
Trigger: CCCTTCCCATGCTTGTAACCAGCTCTGGGGCTTGCA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTCAGGAGTAACAACCTaGGTCACAGCAGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHESGVTT*VTAGPG
Trigger: TCCTGGGCCTGCTGTGACCCAGGTTGTTACTCCTGA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCTGAGGGGAACAGTTaGTCACAGGCTTGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEAEGNS*SQACGE
Trigger: CTCTCCACAAGCCTGTGACCAACTGTTCCCCTCAGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGAGTTTATGTTGCTCTaGAAGCAGAGAGGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICEFMLL*KQRGKK
Trigger: CTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 90 bp TTCAGCTATTGGAGCCAATCAAAGTCCTTTTCTGCTAAAGCTCATTaGAGCTCAGATTTGTTATTTGCAGGCCAAGGCAGAGCCAAGTGC +
Preference number: 2 (lower is better)
Translates to: FSYWSQSKSFSAKAH*SSDLLFAGQGRAKC
Trigger: GCACTTGGCTCTGCCTTGGCCTGCAAATAACAAATCTGAGCTCAAATGAGCTTTAGCAGAAAAGGACTTTGATTGGCTCCAATAGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGAGCAAGTAGGTGAATaGATGATTCTGAGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQEQVGE*MILRSP
Trigger: AGGAGACCTCAGAATCATTCATTCACCTACTTGCTC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGTGTCACACACACATaGATTCAGACTTTCACCTTT +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICSVTHT*IQTFTF
Trigger: AAAGGTGAAAGTCTGAATGCATGTGTGTGTGACACT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAGTGTCACACACACATaGATTCAGACTTTCACCTTT +
Preference number: 2 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPSVTHT*IQTFTF
Trigger: AAAGGTGAAAGTCTGAATGCATGTGTGTGTGACACT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTATAGTACAGTGCATTTaGAGGCCATATTCTGACCCT +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSIVQCI*RPYSDP
Trigger: AGGGTCAGAATATGGCCTGCAAATGCACTGTACTAT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGATCTCAGGTCTACCCTaGAGCAGGGAACAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEISGLP*SREQCL
Trigger: GAGACACTGTTCCCTGCTCCAGGGTAGACCTGAGAT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAATTTTTAGTAAAGACTaGGTTTCACCACGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQIFSKD*VSPRWP
Trigger: TGGCCAACGTGGTGAAACCCAGTCTTTACTAAAAAT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTCTGACCCTACCCATTaGCCTTACTTTTTCAAGGCA +
Preference number: 2 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQSDPTH*PYFFKA
Trigger: TGCCTTGAAAAAGTAAGGCCAATGGGTAGGGTCAGA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTTGGTCACAGGCTTGTaGAGAGCACCTCTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHELVTGL*RAPLPL
Trigger: CAGAGGAAGAGGTGCTCTCCACAAGCCTGTGACCAA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGCCAGGGTCAGCTATaGAAAGCAAGAGAGTCTAAC +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSQGQL*KARESN
Trigger: GTTAGACTCTCTTGCTTTCCATAGCTGACCCTGGCT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGAGAGCCAGGTATGAATaGGAACCTGGTAAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHERARYE*EPGKGW
Trigger: CCAGCCCTTACCAGGTTCCCATTCATACCTGGCTCT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGAGTTTATGTTGCTCTaGAAGCAGAGAGGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSEFMLL*KQRGKK
Trigger: CTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 90 bp CATGTCCACTTGATGCTGGGATTCCACTTCAATCAAATGAGGCAATaGGACTCTACTGCAGCTAACTGCTACTTACACATCAGAATTACC +
Preference number: 2 (lower is better)
Translates to: HVHLMLGFHFNQMRQ*DSTAANCYLHIRIT
Trigger: GGTAATTCTGATGTGTAAGTAGCAGTTAGCTGCAGTAGAGTCCAATTGCCTCATTTGATTGAAGTGGAATCCCAGCATCAAGTGGACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTaGATGCTGGGATTCCACTTCAATCAAATGAGGCAATTGGACTCT +
Preference number: 2 (lower is better)
Translates to: HLVCKHQSWAKSHVH*MLGFHFNQMRQLDS
Trigger: AGAGTCCAATTGCCTCATTTGATTGAAGTGGAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGAGGCCTGTGGTGGTTTaGTCTGTTCCATACCTAGGA +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHERPVVV*SVPYLG
Trigger: TCCTAGGTATGGAACAGATCAAACCACCACAGGCCT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGATGGCGGAAGAAGGCTaGGAAGGCATCAGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEMAEEG*EGIRVD
Trigger: ATCAACTCTGATGCCTTCTCAGCCTTCTTCCGCCAT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTTCAAGCCATTCTCCTaGTTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEFKPFS*FSLLSS
Trigger: GCTACTCAGGAGGCTGAAGCAGGAGAATGGCTTGAA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATCAGACATAGGCCTGTaGTGGTTTGATCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSDIGL*WFDLFH
Trigger: ATGGAACAGATCAAACCACCACAGGCCTATGTCTGA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAACACCTGTACCGTATaGTCATTTGTAATTTCAGGA +
Preference number: 2 (lower is better)
Translates to: LLSESTEIHTPLSKETICNTCTV*SFVISG
Trigger: TCCTGAAATTACAAATGACCATACGGTACAGGTGTT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATCCACTTCAATCAAATaGGGCAATTGGACTCTACTG +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSTSIK*GNWTLL
Trigger: CAGTAGAGTCCAATTGCCTCATTTGATTGAAGTGGA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACCGATTTGTAAGGTGTaGATTAGAGCCAGGTATGAA +
Preference number: 2 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKPICKV*IRARYE
Trigger: TTCATACCTGGCTCTAATTCACACCTTACAAATCGG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTGGGTCACAGGAGGCTaGTTAGGAATTTCTCAAGAG +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEWVTGG*LGISQE
Trigger: CTCTTGAGAAATTCCTAACCAGCCTCCTGTGACCCA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAGATTATTCAGCTATTaGAGCCAATCAAAGTCCTTT +
Preference number: 2 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQRLFSY*SQSKSF
Trigger: AAAGGACTTTGATTGGCTCCAATAGCTGAATAATCT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGTCCCCATAGACTTCTaGGATGTCTTTCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEVPIDF*DVFLSL
Trigger: GAGAGAAAGAAAGACATCTCAGAAGTCTATGGGGAC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp GTTTTCTCGTACTCCAGGTACTCCTTCCGCAGGCGGTaGTCCTCCAGCTCGCGGCCACGGCCCCGCCGCTCC +
Preference number: 3 (lower is better)
Translates to: VFSYSRYSFRRR*SSSSRPRPRRS
Trigger: GGAGCGGCGGGGCCGTGGCCGCGAGCTGGAGGAGCACCGCCTGCGGAAGGAGTACCTGGAGTACGAGAAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp GCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTaGCGGGGGTGGCCAGCGAGTGGTGCACCCCCACGG +
Preference number: 3 (lower is better)
Translates to: AAGRRAASWCNA*RGWPASGAPPR
Trigger: CCGTGGGGGTGCACCACTCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp AGCAGGTCGTCCGCGGCAGCGTCCAGGCAGTTCTCGTaGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCG +
Preference number: 3 (lower is better)
Translates to: SRSSAAASRQFS*DRCCSSRELWA
Trigger: CGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGACGACCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp AGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTaGCCAGCGAGTGGTGCACCCCCACGGGCTCATCCA +
Preference number: 3 (lower is better)
Translates to: RRAASWCNAWRG*PASGAPPRAHP
Trigger: TGGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CAA 90 bp GGCGGCGCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCACGCCATTAGCTAGCTaGTCTCCAGCTGGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: GGAECVAAAKLMRAIQELTPLAS*SPAGGL
Trigger: GAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGT...GAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGCGCCGCC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp AGTCAGCCGTGCGCAGCTGGAAGACGTGCGGCTTCTTaGTGTAATGCGTGGCGGGGGTGGCCAGCGAGTGGT +
Preference number: 3 (lower is better)
Translates to: SQPCAAGRRAAS*CNAWRGWPASG
Trigger: ACCACTCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGGCTGACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR TCA 72 bp CCCCCTCTTGGCGGGCAGCCTACTTGCACACTTGGCTaGACAGAGACAATGGTGGCTGGTCCCTCCGGCCCA +
Preference number: 3 (lower is better)
Translates to: PPLGGQPTCTLG*TETMVAGPSGP
Trigger: TGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp GCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCTTaGTCATCTTGCCAGCTGGCAGGGACGGCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: ALWDPEPAEGRA*SSCQLAGTAGP
Trigger: AGGCCCAGCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp ACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCTaGTCGCCAGCCTCCGTCCCATCCCTCACAACTCTC +
Preference number: 3 (lower is better)
Translates to: TEKSPEPGLGLA*SPASVPSLTTL
Trigger: GAGAGTTGTGAGGGATGGGACGGAGGCTGGCGACCAGGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp GAGGCCCCCTCTTGGCGGGCAGCCTACTTGCACACTTaGCTGAACAGAGACAATGGTGGCTGGTCCCTCCGG +
Preference number: 3 (lower is better)
Translates to: EAPSWRAAYLHT*LNRDNGGWSLR
Trigger: CCGGAGGGACCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp TGCGCTCTGAGATGTTGCGCTTCACCTTGGCCGTGGTaGGAGCCTCATCCTGGTGCAGGGACGGGCTCGAGT +
Preference number: 3 (lower is better)
Translates to: CALRCCASPWPW*EPHPGAGTGSS
Trigger: ACTCGAGCCCGTCCCTGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp TTCTGCGCTCTGAGATGTTGCGCTTCACCTTGGCCGTaGTGGGAGCCTCATCCTGGTGCAGGGACGGGCTCG +
Preference number: 3 (lower is better)
Translates to: FCALRCCASPWP*WEPHPGAGTGS
Trigger: CGAGCCCGTCCCTGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CAA 90 bp CTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCTTGCTCATCTTGCCAGCTGGCACTCTGGGGACTGTGCTaGGGGCATAGGGCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: LWDPEPAEGRACSSCQLALWGLC*GHRAPR
Trigger: CCTGGGAGCCCTATGCCCCAAGCACAGTCCCCAGAG...TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp TGGCCTAGCCCTAGGCCCTGGCCGGAGACCCAAACATaGCCTCCAAGGGCCAACCTTACTTTGTGGAGGTGC +
Preference number: 3 (lower is better)
Translates to: WPSPRPWPETQT*PPRANLTLWRC
Trigger: GCACCTCCACAAAGTAAGGTTGGCCCTTGGAGGCCATGTTTGGGTCTCCGGCCAGGGCCTAGGGCTAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCACCTCCCTCTTCCCTaGGGCGTGGCCAGGGACTGG +
Preference number: 3 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKHLPLP*GVARDW
Trigger: CCAGTCCCTGGCCACGCCCAAGGGAAGAGGGAGGTG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCATCTCCGCATCTAGTGTCCACTaGGGCAAAATGCCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: AECVAAAKLMRAIQELISASSVH*GKMPEL
Trigger: CAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGC...GGAGATGAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR TCA 72 bp CCCAGCCTCCTTCCTACAGGCAGAGCCCCAAGTCCATaGGTCTCCGGAACCTCCCTCAGAGAACAAGCCCAG +
Preference number: 3 (lower is better)
Translates to: PSLLPTGRAPSP*VSGTSLREQAQ
Trigger: CTGGGCTTGTTCTCTGAGGGAGGTTCCGGAGACTCATGGACTTGGGGCTCTGCCTGTAGGAAGGAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp AGTGTCCACTTGGGCAAAATGCCTGAGCTGTGGTGTTaGAGCTGCGGGCTGCCCTCCTGGGACGATGCAGGG +
Preference number: 3 (lower is better)
Translates to: SVHLGKMPELWC*SCGLPSWDDAG
Trigger: CCCTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp CTGGAGCCTGCTCAGCTTTCACCTTCCAGCGTTACCTaGAGCAACCCTGTGGGGAGCTGTAGGCTGTCCCCA +
Preference number: 3 (lower is better)
Translates to: LEPAQLSPSSVT*SNPVGSCRLSP
Trigger: TGGGGACAGCCTACAGCTCCCCACAGGGTTGCTCCAGGTAACGCTGGAAGGTGAAAGCTGAGCAGGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp CTAGCTGGGTCCAACTCAGGGTCAGAGCAGCGAATGTaGACATGTAGAGGGAGGAGGCCAGGAGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LAGSNSGSEQRM*TCRGRRPGVVG
Trigger: GCCCACCACTCCTGGCCTCCTCCCTCTACATGTCCACATTCGCTGCTCTGACCCTGAGTTGGACCCAGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCACTTGCCGTCTGCATCTaGATGCATTTTCCGAGCCAG +
Preference number: 3 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPLAVCI*MHFPSQ
Trigger: CTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAG...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR TCA 72 bp CCGCTTAGGGATGATCTTCCGGTAGGTTCTGCGCTCTaGGATGTTGCGCTTCACCTTGGCCGTGGTGGGAGC +
Preference number: 3 (lower is better)
Translates to: PLRDDLPVGSAL*DVALHLGRGGS
Trigger: GCTCCCACCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTACCGGAAGATCATCCCTAAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR GCA 72 bp AGGGATGAAGCCTGCCACACTGCAGGTGGTCCTAGCTaGCTGACCTCCCTTCCTCACACACTGACACACCTC +
Preference number: 3 (lower is better)
Translates to: RDEACHTAGGPS*LTSLPHTLTHL
Trigger: GAGGTGTGTCAGTGTGTGAGGAAGGGAGGTCAGGCAGCTAGGACCACCTGCAGTGTGGCAGGCTTCATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp AGCCTACTTGCACACTTGGCTGAACAGAGACAATGGTaGCTGGTCCCTCCGGCCCAGCCTCCTTCCTACAGG +
Preference number: 3 (lower is better)
Translates to: SLLAHLAEQRQW*LVPPAQPPSYR
Trigger: CCTGTAGGAAGGAGGCTGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCATTCCAGGCTACCTTGTaGTTCCTGACGCCATTAGCT +
Preference number: 3 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPFQATL*FLTPLA
Trigger: AGCTAATGGCGTCAGGAACAACAAGGTAGCCTGGAA...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR TCA 72 bp GCAAAGCTACCCAGCATCCAAGCAGGATGGCATGCATaGGGGCAGAGCCTAAGCCAGAGCCCAAAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: AKLPSIQAGWHA*GQSLSQSPKEE
Trigger: CTCCTCCTTTGGGCTCTGGCTTAGGCTCTGCCCTCATGCATGCCATCCTGCTTGGATGCTGGGTAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp ATGCAAGCCTGCCTCCAAGTGGTCACATGTCATAACTaGAGCCCACAACCCAGACCCTCCAGGCAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: MQACLQVVTCHN*SPQPRPSRQRC
Trigger: GCACCTCTGCCTGGAGGGTCTGGGTTGTGGGCTGCAGTTATGACATGTGACCACTTGGAGGCAGGCTTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp TACTTGCACACTTGGCTGAACAGAGACAATGGTGGCTaGTCCCTCCGGCCCAGCCTCCTTCCTACAGGCAGA +
Preference number: 3 (lower is better)
Translates to: YLHTWLNRDNGG*SLRPSLLPTGR
Trigger: TCTGCCTGTAGGAAGGAGGCTGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp AGCGAATGTGGACATGTAGAGGGAGGAGGCCAGGAGTaGTGGGCAAGACTGTCAGCAAGCCTGCACAGGGAA +
Preference number: 3 (lower is better)
Translates to: SECGHVEGGGQE*WARLSASLHRE
Trigger: TTCCCTGTGCAGGCTTGCTGACAGTCTTGCCCACCACTCCTGGCCTCCTCCCTCTACATGTCCACATTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGACAGGGAAACAAGGTTaGTCCTTCAGCAGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: DALLVGGHCGILSQLKEGTGKQG*SFSRER
Trigger: CCTTTCCCTGCTGAAGGACAAACCTTGTTTCCCTGT...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR TCA 72 bp CAACCTGGGTCACAGCAGGCCCAGGACCCTGGAAGCTaGGCTCCCCTATATGGGAAAGGAAGAACTAAAGCC +
Preference number: 3 (lower is better)
Translates to: QPGSQQAQDPGS*APLYGKGRTKA
Trigger: GGCTTTAGTTCTTCCTTTCCCATATAGGGGAGCTCAGCTTCCAGGGTCCTGGGCCTGCTGTGACCCAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp TTCAGACTTCCGGAAGCCCTCCAGGCGATAGAGGCGTaGGGCCAAGTTCCAGGCTACCTTGTTGTTCCTGAC +
Preference number: 3 (lower is better)
Translates to: FRLPEALQAIEA*GQVPGYLVVPD
Trigger: GTCAGGAACAACAAGGTAGCCTGGAACTTGGCCTCACGCCTCTATCGCCTGGAGGGCTTCCGGAAGTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR TCA 72 bp ATCTCAGGTCTACCCTGGAGCAGGGAACAGTGTCTCTaGGGTGGTGCTGGCTTCACAGCTGATTGCGGTTCC +
Preference number: 3 (lower is better)
Translates to: ISGLPWSREQCL*GGAGFTADCGS
Trigger: GGAACCGCAATCAGCTGTGAAGCCAGCACCACCTCAGAGACACTGTTCCCTGCTCCAGGGTAGACCTGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR GCA 72 bp TGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATaGCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAG +
Preference number: 3 (lower is better)
Translates to: CRLHLDAFSEPG*PACRWALWDPE
Trigger: CTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp AGAGCCCAGGAAGCAGTTATATCAGGAGTAACAACCTaGGTCACAGCAGGCCCAGGACCCTGGAAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: RAQEAVISGVTT*VTAGPGPWKLS
Trigger: GCTCAGCTTCCAGGGTCCTGGGCCTGCTGTGACCCAGGTTGTTACTCCTGATATAACTGCTTCCTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp AGGGGAAGATCCCCGGATTGCAATGGTGGAAGCGTCTaGAGAACTGGTAGAGGATTCGCTCCCGTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: RGRSPDCNGGSV*RTGRGFAPVPE
Trigger: CTCAGGAACGGGAGCGAATCCTCTACCAGTTCTCCAGACGCTTCCACCATTGCAATCCGGGGATCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CAA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCACAGGGAAACAAGGTTaGTCCTTCAGCAGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: ACVERSTEKSPEPGLGLATGKQG*SFSRER
Trigger: CCTTTCCCTGCTGAAGGACAAACCTTGTTTCCCTGT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTGGCGGGCAGCCTACTaGCACACTTGGCTGAACAGA +
Preference number: 3 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRWRAAY*HTWLNR
Trigger: TCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGCAGAGGCCCCCTCTaGGCGGGCAGCCTACTTGCA +
Preference number: 3 (lower is better)
Translates to: LLSESTEIHTPLSKETICSRGPL*AGSLLA
Trigger: TGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp ACCCAAACATGGCCTCCAAGGGCCAACCTTACTTTGTaGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGG +
Preference number: 3 (lower is better)
Translates to: TQTWPPRANLTL*RCKPQSWLQAW
Trigger: CCATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTTGGAGGCCATGTTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp CCCTCTTTGTTGACCTGTTATTTATTGTGCACCCATTaGGTGCATGGCCTAGCCCTAGGCCCTGGCCGGAGA +
Preference number: 3 (lower is better)
Translates to: PSLLTCYLLCTH*VHGLALGPGRR
Trigger: TCTCCGGCCAGGGCCTAGGGCTAGGCCATGCACCCAATGGGTGCACAATAAATAACAGGTCAACAAAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp AGCTTTCACCTTCCAGCGTTACCTGGAGCAACCCTGTaGGGAGCTGTAGGCTGTCCCCATAGACTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: SFHLPALPGATL*GAVGCPHRLLR
Trigger: TCTCAGAAGTCTATGGGGACAGCCTACAGCTCCCCACAGGGTTGCTCCAGGTAACGCTGGAAGGTGAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCACCTCCCTCTTCCCTaGGGCGTGGCCAGGGACTGG +
Preference number: 3 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQHLPLP*GVARDW
Trigger: CCAGTCCCTGGCCACGCCCAAGGGAAGAGGGAGGTG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGAGCAAGACCATCCTaGGGGCTGTGGCTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKRARPS*GLWLPW
Trigger: CCAGGGGAGCCACAGCCCCAAGGATGGTCTTGCTCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGCCATTCAAGAAACCTaGAGGATCTGTGAGCATGCC +
Preference number: 3 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAAIQET*RICEHA
Trigger: GGCATGCTCACAGATCCTCAAGGTTTCTTGAATGGC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCGTGTTGGGAAGATCCCCGGATaGCAATGGTGGAAGCGTCTG +
Preference number: 3 (lower is better)
Translates to: EFLAAHALPNVLSMQVRVGKIPG*QWWKRL
Trigger: CAGACGCTTCCACCATTGCAATCCGGGGATCTTCCC...AACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR TCA 72 bp GGTGGGAACAAGGTCAGACATAGGCCTGTGGTGGTTTaGTCTGTTCCATACCTAGGATGGGGACTGGAGCCT +
Preference number: 3 (lower is better)
Translates to: GGNKVRHRPVVV*SVPYLGWGLEP
Trigger: AGGCTCCAGTCCCCATCCTAGGTATGGAACAGATCAAACCACCACAGGCCTATGTCTGACCTTGTTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp TGGATCTTGAGAGTTCCTGGGGCCATCTTGGAAGCATaGGGGTTGTTCCTGCTCATAGGCCTGGGAGATGGA +
Preference number: 3 (lower is better)
Translates to: WILRVPGAILEA*GLFLLIGLGDG
Trigger: TCCATCTCCCAGGCCTATGAGCAGGAACAACCCTCATGCTTCCAAGATGGCCCCAGGAACTCTCAAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp GAGTTGATGACTGCAGCCATCAATTGCCCTAGGAGGTaGCATTTCAGGCAAAGGTGGGGTGGACGCCGATTT +
Preference number: 3 (lower is better)
Translates to: ELMTAAINCPRR*HFRQRWGGRRF
Trigger: AAATCGGCGTCCACCCCACCTTTGCCTGAAATGGCACCTCCTAGGGCAATTGATGGCTGCAGTCATCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp AAGACTGTGAAGCATCTAGTGTCCACTTGGGCAAAATaGCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: KTVKHLVSTWAK*LSCGVEAAGCP
Trigger: AGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR GCA 72 bp AGTCAGGTGAATGTCAGGCTGGACGTCTCCAGTCTCTaGAGGCCTGGCTGTTCCTTCACTCTTTACTTCCTC +
Preference number: 3 (lower is better)
Translates to: SQVNVRLDVSSL*RPGCSFTLYFL
Trigger: GAGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGCCTGACATTCACCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp GACCTTAGCGACCCTGCTCCCTGGGTCACAGGAGGCTaGTTAGGAATTTCTCAAGAGTCCCTGATTCACTCT +
Preference number: 3 (lower is better)
Translates to: DLSDPAPWVTGG*LGISQESLIHS
Trigger: AGAGTGAATCAGGGACTCTTGAGAAATTCCTAACCAGCCTCCTGTGACCCAGGGAGCAGGGTCGCTAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp AGCAAGCCTGCACAGGGAAAGCATCTCTTCTGTGTCTaGGTACCTCCTCCTGAACCTGTGTCACACCACAGA +
Preference number: 3 (lower is better)
Translates to: SKPAQGKHLFCV*VPPPEPVSHHR
Trigger: TCTGTGGTGTGACACAGGTTCAGGAGGAGGTACCCAGACACAGAAGAGATGCTTTCCCTGTGCAGGCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGAGCAGAGGCCCCCTCTaGGCGGGCAGCCTACTTGCA +
Preference number: 3 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLSRGPL*AGSLLA
Trigger: TGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp AAGATCAGGCTGAGCCTGGGTGCAGGGTCTGGTAGATaGTCACATAGCTATCAAGGCCAAAGGTCGCTGAGA +
Preference number: 3 (lower is better)
Translates to: KIRLSLGAGSGR*SHSYQGQRSLR
Trigger: TCTCAGCGACCTTTGGCCTTGATAGCTATGTGATCATCTACCAGACCCTGCACCCAGGCTCAGCCTGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp GACACACCTCCCTCTTTGTTGACCTGTTATTTATTGTaGACCCATTGGGTGCATGGCCTAGCCCTAGGCCCT +
Preference number: 3 (lower is better)
Translates to: DTPPSLLTCYLL*THWVHGLALGP
Trigger: AGGGCCTAGGGCTAGGCCATGCACCCAATGGGTGCACAATAAATAACAGGTCAACAAAGAGGGAGGTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp TTGATCTGTTCCATACCTAGGATGGGGACTGGAGCCTaGTCAGCTTTCACCTTCCAGCGTTACCTGGAGCAA +
Preference number: 3 (lower is better)
Translates to: LICSIPRMGTGA*SAFTFQRYLEQ
Trigger: TTGCTCCAGGTAACGCTGGAAGGTGAAAGCTGAGCAGGCTCCAGTCCCCATCCTAGGTATGGAACAGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp GCATGCCTGCTCAGCTCAGCAGGAGGAAAAAGGACCTaGTACGGCCAGGTTTTCACAAGGTTCTGGGATATT +
Preference number: 3 (lower is better)
Translates to: ACLLSSAGGKRT*YGQVFTRFWDI
Trigger: AATATCCCAGAACCTTGTGAAAACCTGGCCGTAGCAGGTCCTTTTTCCTCCTGCTGAGCTGAGCAGGCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp GCCATTCAAGAAACCTTGAGGATCTGTGAGCATGCCTaGTCAGCTCAGCAGGAGGAAAAAGGACCTGCTACG +
Preference number: 3 (lower is better)
Translates to: AIQETLRICEHA*SAQQEEKGPAT
Trigger: CGTAGCAGGTCCTTTTTCCTCCTGCTGAGCTGAGCAGGCATGCTCACAGATCCTCAAGGTTTCTTGAATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp CCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTaGCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: PGEAVEINNPSS*PQGVYVALEAE
Trigger: CTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp TCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTaGAAATCAACAATCCCAGTTCCTGCCCACAGGGAG +
Preference number: 3 (lower is better)
Translates to: SFDSRYQALGKQ*KSTIPVPAHRE
Trigger: CTCCCTGTGGGCAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGATCAGCTCTGCTCTGTaGATGAGCAGTTGGGTATGT +
Preference number: 3 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKISSAL*MSSWVC
Trigger: ACATACCCAACTGCTCATCAACAGAGCAGAGCTGAT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGACACACATACACACTaGGAGCAAAGAGGGATGAAG +
Preference number: 3 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKDTHTH*EQRGMK
Trigger: CTTCATCCCTCTTTGCTCCAAGTGTGTATGTGTGTC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAAAAAGTCATGTCCACTaGATGCTGGGATTCCACTTC +
Preference number: 3 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAKSHVH*MLGFHF
Trigger: GAAGTGGAATCCCAGCATCAAGTGGACATGACTTTT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGGAAAGGAGAATCTCTaGAACCCAGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLGKENL*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGAGATTCTCCTTTCC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGCTGAGGAAGGAGAATaGCTTGAACCCGGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQAEEGE*LEPGRQ
Trigger: CTGCCTCCCGGGTTCAAGCAATTCTCCTTCCTCAGC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAACAGGGAAACAAGGTTaGTCCTTCAGCAGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSTGKQG*SFSRER
Trigger: CCTTTCCCTGCTGAAGGACAAACCTTGTTTCCCTGT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGAGCAAGACCATCCTaGGGGCTGTGGCTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKRARPS*GLWLPW
Trigger: CCAGGGGAGCCACAGCCCCAAGGATGGTCTTGCTCT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTATCAGCTCTGCTCTGTaGATGAGCAGTTGGGTATGT +
Preference number: 3 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRISSAL*MSSWVC
Trigger: ACATACCCAACTGCTCATCAACAGAGCAGAGCTGAT...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAGGGCCAACCTTACTTaGTGGAGGTGCAAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSRANLT*WRCKPQ
Trigger: CTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACAGTTGGTCACAGGCTaGTGGAGAGCACCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQQLVTG*WRAPLP
Trigger: AGGAAGAGGTGCTCTCCACAAGCCTGTGACCAACTG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp GGAAAGGAGGTGCCTCATCCGTCATGGTGGACTCATTaGAATAAGTCTCCTCCAGGGAGGTTCATCTCAGGT +
Preference number: 3 (lower is better)
Translates to: GKEVPHPSWWTH*NKSPPGRFISG
Trigger: ACCTGAGATGAACCTCCCTGGAGGAGACTTATTTCAATGAGTCCACCATGACGGATGAGGCACCTCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000409656.5
ENST00000441564.7
3UTR GCA 72 bp ACAGCAGGACACCTGAGCAGCCAGAAGCTAGAAAGATaGAAGCCTGCCTCCAAGTGGTCACATGTCATAACT +
Preference number: 3 (lower is better)
Translates to: TAGHLSSQKLER*KPASKWSHVIT
Trigger: AGTTATGACATGTGACCACTTGGAGGCAGGCTTGCATCTTTCTAGCTTCTGGCTGCTCAGGTGTCCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp TCAGATTTGTTATTTGCAGGCCAAGGCAGAGCCAAGTaGAAAGCTACCCAGCATCCAAGCAGGATGGCATGC +
Preference number: 3 (lower is better)
Translates to: SDLLFAGQGRAK*KATQHPSRMAC
Trigger: GCATGCCATCCTGCTTGGATGCTGGGTAGCTTTGCACTTGGCTCTGCCTTGGCCTGCAAATAACAAATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp ACTGGCTCAGATATGGGCACACGGCCCAAGGCAGGCTaGTACAGGAGACTATTCCTGGATTTGAGTTTGAAA +
Preference number: 3 (lower is better)
Translates to: TGSDMGTRPKAG*YRRLFLDLSLK
Trigger: TTTCAAACTCAAATCCAGGAATAGTCTCCTGTAGCAGCCTGCCTTGGGCCGTGTGCCCATATCTGAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp TGTGTACAGAATCTACTGAGGGGAAGATCCCCGGATTaGAATGGTGGAAGCGTCTGGAGAACTGGTAGAGGA +
Preference number: 3 (lower is better)
Translates to: CVQNLLRGRSPD*NGGSVWRTGRG
Trigger: TCCTCTACCAGTTCTCCAGACGCTTCCACCATTGCAATCCGGGGATCTTCCCCTCAGTAGATTCTGTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR CCA 72 bp CCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTaGGCAAAATGCCTGAGCTGTGGTGTTGAAGCTGCG +
Preference number: 3 (lower is better)
Translates to: PRVKTVKHLVST*AKCLSCGVEAA
Trigger: CGCAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATGGAACAAAGGCTCCTaGTTCCTAGGGTTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKWNKGS*FLGFQG
Trigger: ACCCTGGAACCCTAGGAACAAGGAGCCTTTGTTCCA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTGGCGGGCAGCCTACTaGCACACTTGGCTGAACAGA +
Preference number: 3 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQWRAAY*HTWLNR
Trigger: TCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTTTATTGTGCACCCATaGGGTGCATGGCCTAGCCCT +
Preference number: 3 (lower is better)
Translates to: LLSESTEIHTPLSKETICFIVHP*GAWPSP
Trigger: AGGGCTAGGCCATGCACCCAATGGGTGCACAATAAA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGCCAAGATCACACCATaGCACTCCAGCCTGGGTTAC +
Preference number: 3 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSAKITP*HSSLGY
Trigger: GTAACCCAGGCTGGAGTGCAATGGTGTGATCTTGGC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGTGTAATCCCAGCTACTaGGGAGGCTGGGAAAGGAGA +
Preference number: 3 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPCNPSY*GGWERR
Trigger: TCTCCTTTCCCAGCCTCCCAAGTAGCTGGGATTACA...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGCTGGTCCCTATGTTTaGGTGGTGCTGACTTCACTC +
Preference number: 3 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKAGPYV*VVLTSL
Trigger: GAGTGAAGTCAGCACCACCAAAACATAGGGACCAGC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp ATCAATTGCCCTAGGAGGTGCCATTTCAGGCAAAGGTaGGGTGGACGCCGATTTGTAAGGTGTGAATTAGAG +
Preference number: 3 (lower is better)
Translates to: INCPRRCHFRQR*GGRRFVRCELE
Trigger: CTCTAATTCACACCTTACAAATCGGCGTCCACCCCACCTTTGCCTGAAATGGCACCTCCTAGGGCAATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGCCTACTTGCACACTaGGCTGAACAGAGACAATGG +
Preference number: 3 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKSLLAH*AEQRQW
Trigger: CCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTTTATTGTGCACCCATaGGGTGCATGGCCTAGCCCT +
Preference number: 3 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSFIVHP*GAWPSP
Trigger: AGGGCTAGGCCATGCACCCAATGGGTGCACAATAAA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAACCAGTGGGCAAGATaGTCAACTCATGGAGTCAGG +
Preference number: 3 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKNQWAR*STHGVR
Trigger: CCTGACTCCATGAGTTGACAATCTTGCCCACTGGTT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAACCAGTGGGCAAGATaGTCAACTCATGGAGTCAGG +
Preference number: 3 (lower is better)
Translates to: LLSESTEIHTPLSKETICNQWAR*STHGVR
Trigger: CCTGACTCCATGAGTTGACAATCTTGCCCACTGGTT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGAGAGAAAAGGGGCCTaGAATCAGAGTGAAGCCCGA +
Preference number: 3 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSERKGA*NQSEAR
Trigger: TCGGGCTTCACTCTGATTCAAGGCCCCTTTTCTCTC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp GCTTTAAACATATTTATCTATCCCTCTGACCCAGGCTaGCTGAATCAGCATCCCTGGGTGTGGGCTGGGAAT +
Preference number: 3 (lower is better)
Translates to: ALNIFIYPSDPG*LNQHPWVWAGN
Trigger: ATTCCCAGCCCACACCCAGGGATGCTGATTCAGTCAGCCTGGGTCAGAGGGATAGATAAATATGTTTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp ACTCATGCCATCAGCTCTGCTCTGTTGATGAGCAGTTaGGTATGTGAGACTGTTTCATCTACTTCGGGGGAA +
Preference number: 3 (lower is better)
Translates to: THAISSALLMSS*VCETVSSTSGE
Trigger: TTCCCCCGAAGTAGATGAAACAGTCTCACATACCCAACTGCTCATCAACAGAGCAGAGCTGATGGCATGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp AACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTaGTCTGAACATAGAGAACCTCCTTCTCTGCTCTGT +
Preference number: 3 (lower is better)
Translates to: NCRHLLPLYPLQ*SEHREPPSLLC
Trigger: ACAGAGCAGAGAAGGAGGTTCTCTATGTTCAGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp ATCCTGTCCTTCCAGTACTCACAATTTCTCCACAGCTaGTCCCTATGTTTTGGTGGTGCTGACTTCACTCTC +
Preference number: 3 (lower is better)
Translates to: ILSFQYSQFLHS*SLCFGGADFTL
Trigger: GAGAGTGAAGTCAGCACCACCAAAACATAGGGACCAGCTGTGGAGAAATTGTGAGTACTGGAAGGACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp GAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTaGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: EMCILSTLDIRP*GSSGNQQSQFL
Trigger: CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTaGTGTGTGATCTTTCAAAGCAAACGGATGACCTCA +
Preference number: 3 (lower is better)
Translates to: GPSIRVTSLYVS*CVIFQSKRMTS
Trigger: TGAGGTCATCCGTTTGCTTTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTGGAACAAAGGCTCCTaGTTCCTAGGGTTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQWNKGS*FLGFQG
Trigger: ACCCTGGAACCCTAGGAACAAGGAGCCTTTGTTCCA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATCCTTCTCTGCTCTGTaGGAACAAAGGCTCCTTGTT +
Preference number: 3 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQSFSAL*EQRLLV
Trigger: AACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGGA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAGCCTACTTGCACACTaGGCTGAACAGAGACAATGG +
Preference number: 3 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSSLLAH*AEQRQW
Trigger: CCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATTGACCTGTTATTTATaGTGCACCCATTGGGTGCAT +
Preference number: 3 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSLTCYL*CTHWVH
Trigger: ATGCACCCAATGGGTGCACAATAAATAACAGGTCAA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGACACACATACACACTaGGAGCAAAGAGGGATGAAG +
Preference number: 3 (lower is better)
Translates to: LLSESTEIHTPLSKETICDTHTH*EQRGMK
Trigger: CTTCATCCCTCTTTGCTCCAAGTGTGTATGTGTGTC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCTCCAAGCCCTGAGCTaGGCACTCTTCTCTTTAAAA +
Preference number: 3 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPLQALS*ALFSLK
Trigger: TTTTAAAGAGAAGAGTGCCAAGCTCAGGGCTTGGAG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGAGAAGGCATCAGAGTaGATGACTGCAGCCATCAAT +
Preference number: 3 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQEKASE*MTAAIN
Trigger: ATTGATGGCTGCAGTCATCAACTCTGATGCCTTCTC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACACAAGATCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 3 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQHKIRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGATCTTGTG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp ATGATTGCACATGTCAAGGTGTGTACAGAATCTACTGAGGGGAAGATCCCCGGAAAGTTCCAGGCTACCTaGTTGTTCCTGACGCCATTA +
Preference number: 3 (lower is better)
Translates to: MIAHVKVCTESTEGKIPGKFQAT*LFLTPL
Trigger: TAATGGCGTCAGGAACAACAAGGTAGCCTGGAACTT...TCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
3UTR-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGAATCAAATGAGGCAATaGGACTCTACTGCAGCTAAC +
Preference number: 3 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLNQMRQ*DSTAAN
Trigger: GTTAGCTGCAGTAGAGTCCAATTGCCTCATTTGATT...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACTCTCCTTGGCTGCATaGGAGACCCTGTATGATCTG +
Preference number: 3 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKLSLAA*ETLYDL
Trigger: CAGATCATACAGGGTCTCCAATGCAGCCAAGGAGAG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp TACCCAAGGAGCTTTAAACATATTTATCTATCCCTCTaGCCCAGGCTGACTGAATCAGCATCCCTGGGTGTG +
Preference number: 3 (lower is better)
Translates to: YPRSFKHIYLSL*PRLTESASLGV
Trigger: CACACCCAGGGATGCTGATTCAGTCAGCCTGGGTCAGAGGGATAGATAAATATGTTTAAAGCTCCTTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp GCGGGTCTTGGTGATCTTTTTATCTACCCTGGTGCCTaGCAAGCAACAAACAAATATCATCAGCAGAAAGCC +
Preference number: 3 (lower is better)
Translates to: AGLGDLFIYPGA*QATNKYHQQKA
Trigger: GGCTTTCTGCTGATGATATTTGTTTGTTGCTTGCCAGGCACCAGGGTAGATAAAAAGATCACCAAGACCCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGTCCTTCTCTGCTCTGTaGGAACAAAGGCTCCTTGTT +
Preference number: 3 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLSFSAL*EQRLLV
Trigger: AACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGGA...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATTGACCTGTTATTTATaGTGCACCCATTGGGTGCAT +
Preference number: 3 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKLTCYL*CTHWVH
Trigger: ATGCACCCAATGGGTGCACAATAAATAACAGGTCAA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAACACCTCCCTCTTTGTaGACCTGTTATTTATTGTGC +
Preference number: 3 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKTPPSL*TCYLLC
Trigger: GCACAATAAATAACAGGTCAACAAAGAGGGAGGTGT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGACACACCTCCCTCTTaGTTGACCTGTTATTTATTG +
Preference number: 3 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKDTPPS*LTCYLL
Trigger: CAATAAATAACAGGTCAACAAAGAGGGAGGTGTGTC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAAAAGTCATGTCCACTaGATGCTGGGATTCCACTTC +
Preference number: 3 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSKSHVH*MLGFHF
Trigger: GAAGTGGAATCCCAGCATCAAGTGGACATGACTTTT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGTTCCTGGATTTGAGTTaGAAACTTCCAGGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPFLDLS*KLPGSR
Trigger: TCTGCTTCCTGGAAGTTTCAAACTCAAATCCAGGAA...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATTCCTGGATTTGAGTTaGAAACTTCCAGGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQFLDLS*KLPGSR
Trigger: TCTGCTTCCTGGAAGTTTCAAACTCAAATCCAGGAA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGAGACTATTCCTGGATTaGAGTTTGAAACTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLRLFLD*SLKLPG
Trigger: TCCTGGAAGTTTCAAACTCAAATCCAGGAATAGTCT...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp CAACTCATGGAGTCAGGGACATGTTTAATTCATTTGTaGATCCCCTGGTACTGGCACATAGAAAGCGTCCCA +
Preference number: 3 (lower is better)
Translates to: QLMESGTCLIHL*IPWYWHIESVP
Trigger: TGGGACGCTTTCTATGTGCCAGTACCAGGGGATTCACAAATGAATTAAACATGTCCCTGACTCCATGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp ACAAACAAATATCATCAGCAGAAAGCCAGGCTCAGCTaGGATCATGAGAGCCCAGGAAGCAGTTATATCAGG +
Preference number: 3 (lower is better)
Translates to: TNKYHQQKARLS*DHESPGSSYIR
Trigger: CCTGATATAACTGCTTCCTGGGCTCTCATGATCTCAGCTGAGCCTGGCTTTCTGCTGATGATATTTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp CACTTTCTGCTATATTTGCACCAAGAAAATGGATCTTaGGAGTTCCTGGGGCCATCTTGGAAGCATGAGGGT +
Preference number: 3 (lower is better)
Translates to: HFLLYLHQENGS*EFLGPSWKHEG
Trigger: ACCCTCATGCTTCCAAGATGGCCCCAGGAACTCTCAAGATCCATTTTCTTGGTGCAAATATAGCAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp TATATTTGCACCAAGAAAATGGATCTTGAGAGTTCCTaGGGCCATCTTGGAAGCATGAGGGTTGTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: YICTKKMDLESS*GHLGSMRVVPA
Trigger: AGCAGGAACAACCCTCATGCTTCCAAGATGGCCCCAGGAACTCTCAAGATCCATTTTCTTGGTGCAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp ATGAAAGAGACTAGCGTGGATAATGTCCTCAAAACATaGCAGCAAATTCAGGCTCAGTTTCTCTGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: MKETSVDNVLKT*QQIQAQFLWAV
Trigger: CACAGCCCAGAGAAACTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAATCAAATGAGGCAATaGGACTCTACTGCAGCTAAC +
Preference number: 3 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFNQMRQ*DSTAAN
Trigger: GTTAGCTGCAGTAGAGTCCAATTGCCTCATTTGATT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCTCTCCTTGGCTGCATaGGAGACCCTGTATGATCTG +
Preference number: 3 (lower is better)
Translates to: ARHCSEMFTCIISLNLHELSLAA*ETLYDL
Trigger: CAGATCATACAGGGTCTCCAATGCAGCCAAGGAGAG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGAGCCAGGTAAGATCTTaGAGGCTACATAGTTTAGGG +
Preference number: 3 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQSQVRS*RLHSLG
Trigger: CCCTAAACTATGTAGCCTCAAAGATCTTACCTGGCT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp GGAGCCAATCAAAGTCCTTTTCTGCTAAAGCTCATTTaGGCTCAGATTTGTTATTTGCAGGCCAAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: GANQSPFLLKLI*AQICYLQAKAE
Trigger: CTCTGCCTTGGCCTGCAAATAACAAATCTGAGCTCAAATGAGCTTTAGCAGAAAAGGACTTTGATTGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp CTTGACTCTAAGGAAAATTACCCACCTCGGCCCAGATaGAAGAGACTAGCGTGGATAATGTCCTCAAAACAT +
Preference number: 3 (lower is better)
Translates to: LDSKENYPPRPR*KRLAWIMSSKH
Trigger: ATGTTTTGAGGACATTATCCACGCTAGTCTCTTTCATCTGGGCCGAGGTGGGTAATTTTCCTTAGAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp AGAGAGTCACTTTCTGCTATATTTGCACCAAGAAAATaGATCTTGAGAGTTCCTGGGGCCATCTTGGAAGCA +
Preference number: 3 (lower is better)
Translates to: RESLSAIFAPRK*ILRVPGAILEA
Trigger: TGCTTCCAAGATGGCCCCAGGAACTCTCAAGATCCATTTTCTTGGTGCAAATATAGCAGAAAGTGACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGACACCTCCCTCTTTGTaGACCTGTTATTTATTGTGC +
Preference number: 3 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQTPPSL*TCYLLC
Trigger: GCACAATAAATAACAGGTCAACAAAGAGGGAGGTGT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp CTCTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTaGGCAAAGAAACGATCTGTATGTTTCAATTCTTTC +
Preference number: 3 (lower is better)
Translates to: LCSVRALKSTLP*AKKRSVCFNSF
Trigger: GAAAGAATTGAAACATACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CCA 72 bp AATAACCTACTCCACTTAGTTTGTAAGCATCAGTCTTaGGCCAAAAGTCATGTCCACTTGATGCTGGGATTC +
Preference number: 3 (lower is better)
Translates to: NNLLHLVCKHQS*AKSHVHLMLGF
Trigger: GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTGGAGTAGGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGACACACCTCCCTCTTaGTTGACCTGTTATTTATTG +
Preference number: 3 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKDTPPS*LTCYLL
Trigger: CAATAAATAACAGGTCAACAAAGAGGGAGGTGTGTC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR GCA 72 bp GAGTTTGAAACTTCCAGGAAGCAGAGAGTCACTTTCTaGTATATTTGCACCAAGAAAATGGATCTTGAGAGT +
Preference number: 3 (lower is better)
Translates to: EFETSRKQRVTF*YICTKKMDLES
Trigger: ACTCTCAAGATCCATTTTCTTGGTGCAAATATAGCAGAAAGTGACTCTCTGCTTCCTGGAAGTTTCAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp AATTCCAGGTCTGAAATTCAGAACAGAGATGAGAGTTaGAGGCTTAGATTTAGAGACTTCTTCCAGAAACTA +
Preference number: 3 (lower is better)
Translates to: NSRSEIQNRDES*RLRFRDFFQKL
Trigger: TAGTTTCTGGAAGAAGTCTCTAAATCTAAGCCTTCAACTCTCATCTCTGTTCTGAATTTCAGACCTGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR TCA 72 bp TACCGTATGGTCATTTGTAATTTCAGGAAGATATATTaGGGAGCCATGTATTGTGGACAGTTAGAATTCCAG +
Preference number: 3 (lower is better)
Translates to: YRMVICNFRKIY*GAMYCGQLEFQ
Trigger: CTGGAATTCTAACTGTCCACAATACATGGCTCCTCAATATATCTTCCTGAAATTACAAATGACCATACGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGCGGCGCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCTCCTCCAGGGAGCTCTaGGCGGGGCCCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGAECVAAAKLMRAIQELSSREL*AGPTGR
Trigger: CCTGCCCGTGGGCCCCGCCCAGAGCTCCCTGGAGGA...GAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGCGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp GGCGGCGCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCGCCAGCCCTCAGGGCTaGGAGAGGCCCAAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GGAECVAAAKLMRAIQELASPQG*ERPKVA
Trigger: TGCAACCTTGGGCCTCTCTCAGCCCTGAGGGCTGGC...GAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGCGCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCATCTCCTGGGCCGCACGAATCTaGGCTGGGAGCCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: AECVAAAKLMRAIQELISWAARI*AGSPQR
Trigger: CCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCA...GGAGATGAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GGCGGCGCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCCAGGGAAGAGATTCCTaGGGGTGTCCACCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GGAECVAAAKLMRAIQELQGRDS*GCPPSL
Trigger: GAGGGAGGGTGGACACCCCCAGGAATCTCTTCCCTG...GAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CGGGCAGGATGGGCCGCACGAATCTGCGCTGGGAGCCCACAGCGGCGGGGAAGGCCTCGCAGTAAGGTGTaGAACATCTTCCAGCCACGC +
Preference number: 4 (lower is better)
Translates to: RAGWAARICAGSPQRRGRPRSKV*NIFQPR
Trigger: GCGTGGCTGGAAGATGTTCCACACCTTACTGCGAGG...CCTTCCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAGCGAGGCCCACGGGCAGGATaGGCCGCACGAATCTGCGCT +
Preference number: 4 (lower is better)
Translates to: QLEDVRLLGVMRGGGGQRGPRAG*AARICA
Trigger: AGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCC...TCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCGGGGCAGGAGAACGGCCTaGGCACCACCTCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RPGSSRGIDAAPPGSSGRGRRTA*APPPEA
Trigger: AGCCTCTGGAGGTGGTGCCCAGGCCGTTCTCCTGCC...CCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CCGTGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGGGCTCATCCACCATCTaGCCCACCAAGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PCAAGRRAASWCNAWRGWGSSTI*PTKLSP
Trigger: GGGGGAGAGCTTGGTGGGGCAGATGGTGGATGAGCC...CCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CCGTGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGGCTTCCCTCCCCAGCTaGTCCTCCCACAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PCAAGRRAASWCNAWRGWASLPS*SSHRSR
Trigger: TCTGGACCTGTGGGAGGAGCAGCTGGGGAGGGAAGC...CCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GGCGGCGCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCCCCGGATTGCAATGGTaGAAGCGTCTGGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: GGAECVAAAKLMRAIQELPGLQW*KRLENW
Trigger: CCAGTTCTCCAGACGCTTCCACCATTGCAATCCGGG...GAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GGCGGCGCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCAGGAGCTCATCTCCTTaGCAGTGGGTGCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGAECVAAAKLMRAIQELRSSSP*QWVPGR
Trigger: TCTTCCAGGCACCCACTGCCAAGGAGATGAGCTCCT...GAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGCGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp CGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCGGCAGGCGATAGAGGCGTaGGGCCAAGTTCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: RPGSSRGIDAAPPGSSGRQAIEA*GQVPGY
Trigger: GTAGCCTGGAACTTGGCCTCACGCCTCTATCGCCTG...CCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGGCATCAGAGGGGCAGTaGAGGCGGGCCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DALLVGGHCGILSQLKEGASEGQ*RRATSS
Trigger: GCTGCTGGTGGCCCGCCTGCACTGCCCCTCTGATGC...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCTGCCCAGGGGCCTCTaGTGCCCCAAGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLALPRGL*CPKLSP
Trigger: GGGGGAGAGCTTGGGGCAGCAGAGGCCCCTGGGCAG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGGCCTAGGCCTCGCCTaGTCGCCAGCCTCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAGLGLA*SPASVP
Trigger: TGGGACGGAGGCTGGCGACCAGGCGAGGCCTAGGCC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCCTGAGCTGTGGTGTTaGAGCTGCGGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: DALLVGGHCGILSQLKEGPELWC*SCGLPS
Trigger: GGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGG...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAATTCGCTCCCGTTCCTaGGTCTCCCCACTGAGCACC +
Preference number: 4 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPIRSRS*VSPLST
Trigger: GGTGCTCAGTGGGGAGACTCAGGAACGGGAGCGAAT...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGTGGCCGCAGCCAAGTTaGTGCGCGCGATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DALLVGGHCGILSQLKEGWPQPS*CARSRS
Trigger: GCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCA...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCATCTCCAAAGGACCTCCTCTCTaGCAGCCCTCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AECVAAAKLMRAIQELISKGPPL*QPSGLR
Trigger: TCTCAGCCCTGAGGGCTGGCAGAGAGGAGGTCCTTT...GGAGATGAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CCGTGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGTCTTCCAGCCACGCTTaGCCCATGGCGTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PCAAGRRAASWCNAWRGWSSSHA*PMASSC
Trigger: GCAAGAAGACGCCATGGGGCAAGCGTGGCTGGAAGA...CCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCGGTGCGCTCTGAGATGTTaGGCTTCACCTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RPGSSRGIDAAPPGSSGRCALRC*ASPWPW
Trigger: CCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCA...CCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGCCCGGGTTTGCTCCTaGCAAGGCTCCAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAARVCS*QGSSPS
Trigger: GGACGGGCTGGAGCCTTGCCAGGAGCAAACCCGGGC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGTGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCTTGTCTCCAGCTGGTaGTCTCTGGCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PCAAGRRAASWCNAWRGWLVSSW*SLAFLW
Trigger: CCAGAGGAAGGCCAGAGACCACCAGCTGGAGACAAG...CCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAGCGAAGACGTGCGGCTTCTTaGTGTAATGCGTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: QLEDVRLLGVMRGGGGQRRRAAS*CNAWRG
Trigger: CCCCCGCCACGCATTACACCAAGAAGCCGCACGTCT...TCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACGCACGAATCTGCGCTaGGAGCCCACAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVARTNLR*EPTAAG
Trigger: CCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCATGCTGGCTTCACAGCTaGTTGCGGTTCCGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPCWLHS*LRFRLG
Trigger: CCCTAAGCGGAACCGCAATCAGCTGTGAAGCCAGCA...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGGCCTCAGGCCACCCTaGCGGCCCTGTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAGLRPP*RPCFPL
Trigger: CAGAGGGAAACAGGGCCGTCAGGGTGGCCTGAGGCC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCGGAGCAGGGAAAGGAGGTaGCTCATCCGTCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: RPGSSRGIDAAPPGSSGRSRERR*LIRHGG
Trigger: TCCACCATGACGGATGAGGCACCTCCTTTCCCTGCT...CCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATGCCTGTGCTCCCTCTaGGCAGAGGGGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVACLCSL*AEGLPR
Trigger: CCTGGGGAGCCCCTCTGCCCAGAGGGAGCACAGGCA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCATCCAGGCAGTTCTCGTaGGATCGATGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPSRQFS*DRCCSS
Trigger: GGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGA...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGCGGAGGGACTGCCATaGGGGTGGTGGGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAAEGLP*GWWGAQ
Trigger: CTGTGCTCCCCACCACCCCCATGGCAGTCCCTCCGC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp AGAGGCCCCCTCTTGGCGGGCAGCCTACTTGCACACTaGGCTGAACAGAGACAATGGTGGCTGGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: RGPLLAGSLLAH*AEQRQWWLVPP
Trigger: CGGAGGGACCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp CGGGTAGCAGAGGCCCCCTCTTGGCGGGCAGCCTACTaGCACACTTGGCTGAACAGAGACAATGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RVAEAPSWRAAY*HTWLNRDNGGW
Trigger: CCAGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCTACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGGCTCCAGCCCGTCCTaGTGGACCCAGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPGSSPS*WTQLPR
Trigger: CCTGGGGAGCTGGGTCCATCAGGACGGGCTGGAGCC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCTTGCTCATCTTGCCAGCTGGCAGGGACTTCTTCAGGCTaGGCTTGGGCTCCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: LWDPEPAEGRACSSCQLAGTSSG*AWAPEC
Trigger: GCACTCGGGAGCCCAAGCTCAGCCTGAAGAAGTCCC...TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCCCTCACAACTCTCCTaGGCTGTGGCTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAPSQLS*AVAPAR
Trigger: CCTGGCAGGAGCCACAGCTCAGGAGAGTTGTGAGGG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGTGGGACCAGGGCCTCTaGTCTCAGATTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DALLVGGHCGILSQLKEGWDQGL*SQILGC
Trigger: GCAGCCCAGAATCTGAGAGCAGAGGCCCTGGTCCCA...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGTTCCTCTGGGGACTGTaGTTGGGGCATAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DALLVGGHCGILSQLKEGFLWGL*LGHRAP
Trigger: GGGAGCCCTATGCCCCAAGCACAGTCCCCAGAGGAA...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp AAATGCCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCTCCTGGGACGATGCAGAGGGCTTGCTCATCTTaGCAGCTGGCAGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: KCLSCGVEAAGCPPGTMQRACSS*QLAGTA
Trigger: AGCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCT...CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CCGTGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCCATGGCGTCTTCTTaGCGTCTGCATCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: PCAAGRRAASWCNAWRGWPMASS*RLHLDA
Trigger: TGCATCAAGATGCAGACGGCAAGAAGACGCCATGGG...CCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp AAATGCCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCTCCTGGGACGATGCAGCTCCTTGGCAGTGGGTaGCTGGAAGAGGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: KCLSCGVEAAGCPPGTMQLLGSG*LEEVEA
Trigger: CGCCTCTACCTCTTCCAGGCACCCACTGCCAAGGAG...CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTGGGCCGCACGAATCTaGGCTGGGAGCCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKWAARI*AGSPQR
Trigger: CCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCTGCCCAGGGGCCTCTaGTGCCCCAAGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRLPRGL*CPKLSP
Trigger: GGGGGAGAGCTTGGGGCAGCAGAGGCCCCTGGGCAG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGCTGCACGTTTCCCTTaGGCACTCTCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAAARFP*ALSWVG
Trigger: CCCCACCCAGGAGAGTGCCCAAGGGAAACGTGCAGC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCGCACGAATCTGCGCTaGGAGCCCACAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMRTNLR*EPTAAG
Trigger: CCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTCCTCCAGGGAGCTCTaGGCGGGGCCCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSSSREL*AGPTGR
Trigger: CCTGCCCGTGGGCCCCGCCCAGAGCTCCCTGGAGGA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATCCTCCAGGGAGCTCTaGGCGGGGCCCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSSSREL*AGPTGR
Trigger: CCTGCCCGTGGGCCCCGCCCAGAGCTCCCTGGAGGA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCACTTGGGCAAAATGCCTaGGCTGTGGTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPLGQNA*AVVLKL
Trigger: CAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAG...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACGTGGCCAGCGAGTGGTaGACCCCCACGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: GCSPSVSKSEDCEASSVHVASEW*TPTGSS
Trigger: GGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCAC...GTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTGGGCCGCACGAATCTaGGCTGGGAGCCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPWAARI*AGSPQR
Trigger: CCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGGAGCCTCATCCTGGTaGAGGGACGGGCTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKGASSW*RDGLEW
Trigger: CCACTCGAGCCCGTCCCTGCACCAGGATGAGGCTCC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGGCCTCCAAACTGGAAGAAGGACAGGTACTCCTCAGCCACAGCCCTGCTAAAGGAGCCTCATCCTGGTaGAGGGACGGGCTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LASKLEEGQVLLSHSPAKGASSW*RDGLEW
Trigger: CCACTCGAGCCCGTCCCTGCACCAGGATGAGGCTCC...TTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAGTTTGGAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGCCCGGGTTTGCTCCTaGCAAGGCTCCAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRARVCS*QGSSPS
Trigger: GGACGGGCTGGAGCCTTGCCAGGAGCAAACCCGGGC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp TCTTGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATGCCCTGCTTGTAGGAATGCGTGGCGGGGGTaGCCAGCGAGTGGTGCACCC +
Preference number: 4 (lower is better)
Translates to: SCRLHLDAFSEPGCPACRNAWRG*PASGAP
Trigger: GGGTGCACCACTCGCTGGCCACCCCCGCCACGCATT...CCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCGGAGGGACTGCCATaGGGGTGGTGGGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPAEGLP*GWWGAQ
Trigger: CTGTGCTCCCCACCACCCCCATGGCAGTCCCTCCGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCAGCGACCCTGCTCCCTaGGTCACAGGAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLASDPAP*VTGGWL
Trigger: TAACCAGCCTCCTGTGACCCAGGGAGCAGGGTCGCT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCTGGACGTCTCCAGTCTCTGCAGGCCTGGCTGTTCCTTCACTCTTTACTTCCTTCCTCCCCTGGAGCCTaGCAGCATGCCCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGRLQSLQAWLFLHSLLPSSPGA*QHALSS
Trigger: GGAGGACAGGGCATGCTGCCAGGCTCCAGGGGAGGA...AGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCTCAGCGGCAGCCACTaGGGCCCAGCAGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRLSGSH*GPADGV
Trigger: CACTCCATCTGCTGGGCCTCAGTGGCTGCCGCTGAG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTGGCCGCAGCCAAGTTaGTGCGCGCGATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPWPQPS*CARSRS
Trigger: GCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGCAGCAGAGACCCTCTaGGCTGCCAGAGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAAAETL*AARDGE
Trigger: TTCCCCATCTCTGGCAGCTCAGAGGGTCTCTGCTGC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCACACACATCTGGGCCTaGAGGATGCCTGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLATHIWA*RMPAQN
Trigger: GTTCTGGGCAGGCATCCTGCAGGCCCAGATGTGTGT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATGGGACCAGGGCCTCTaGTCTCAGATTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAWDQGL*SQILGC
Trigger: GCAGCCCAGAATCTGAGAGCAGAGGCCCTGGTCCCA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGCATCAGAGGGGCAGTaGAGGCGGGCCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSASEGQ*RRATSS
Trigger: GCTGCTGGTGGCCCGCCTGCACTGCCCCTCTGATGC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp TCTTGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATGCCCTGCTTGTAGGGCTTGGGCTCCCGAGTaGCTCCAGCTTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SCRLHLDAFSEPGCPACRAWAPE*LQLPSP
Trigger: TGGGGAGGGAAGCTGGAGGCACTCGGGAGCCCAAGC...CCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCTTGGGCTCCCGAGTaGCTCCAGCTTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPAWAPE*LQLPSP
Trigger: TGGGGAGGGAAGCTGGAGGCACTCGGGAGCCCAAGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCCGACCCTCCAGTCCTaGTCCTTCCAACCCCGACAC +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKPTLQS*SFQPRH
Trigger: GTGTCGGGGTTGGAAGGAGCAGGACTGGAGGGTCGG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGAAGAGGAGCCAGTGTaGCGGCTGAGGGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAEEEPV*RLRGTV
Trigger: AACTGTTCCCCTCAGCCGGCACACTGGCTCCTCTTC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCAAGAATGGATGGCTTaGCCTGGGCTCCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAQEWMA*PGLPKS
Trigger: GCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCGGAGTGCGTGGCCGCAGCCAAGTTGATGCGCGCGATCCAGGAGCTCATCTCCCATCTAGTGTCCACTTaGGCAAAATGCCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: AECVAAAKLMRAIQELISHLVST*AKCLSC
Trigger: ACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATG...GGAGATGAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATTCCTCGCCTGGTTTTaGGGCCTCCCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAFLAWF*GLPCLL
Trigger: AAGGAGGCAGGGGAGGCCCCAAAACCAGGCGAGGAA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GAACTTGGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTCGCACGAATCTGCGCTaGGAGCCCACAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ELGCSPSVSKSEDCEASSRTNLR*EPTAAG
Trigger: CCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCG...ACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCCAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGAACAGAGACAATGGTaGCTGGTCCCTCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAEQRQW*LVPPAQ
Trigger: CTGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCCGGAGACCCAAACATaGCCTCCAAGGGCCAACCTT +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAPETQT*PPRANL
Trigger: AAGGTTGGCCCTTGGAGGCCATGTTTGGGTCTCCGG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTCCCTCACTCTCCCCGTaGCCAGGAGGTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSPSLSP*PGGAAG
Trigger: TCCTGCAGCACCTCCTGGTCACGGGGAGAGTGAGGG...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGCCAGCCCTCAGGGCTaGGAGAGGCCCAAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSASPQG*ERPKVA
Trigger: TGCAACCTTGGGCCTCTCTCAGCCCTGAGGGCTGGC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCAAGGCCAAAGGTCGCTaGGAGGTGATGGCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAKAKGR*EVMAEE
Trigger: TTCTTCCGCCATCACCTCTCAGCGACCTTTGGCCTT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGGGGCAAGATCAGGCTaGGCCTGGGTGCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSGARSG*AWVQGL
Trigger: CAGACCCTGCACCCAGGCTCAGCCTGATCTTGCCCC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCCACTGAGCAAAAGCTaGCCAGGAGTGCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPPLSKS*PGVPRS
Trigger: GCTCCGGGGCACTCCTGGGCAGCTTTTGCTCAGTGG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGTGGATCCTCATGGCTaGACGTTTCCCTTGGGCACT +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAVDPHG*TFPLGT
Trigger: AGTGCCCAAGGGAAACGTGCAGCCATGAGGATCCAC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGTGACCAGGAGGTGCTaGAGGAGCCCCCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLVTRRC*RSPLSG
Trigger: GCCGCTGAGGGGGCTCCTGCAGCACCTCCTGGTCAC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATTCGTCCACACACGGTaGTGCAGATGGAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAFVHTR*CRWSRT
Trigger: GGTCCTGCTCCATCTGCAGCACCGTGTGTGGACGAA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTGGGACCAGGGCCTCTaGTCTCAGATTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKWDQGL*SQILGC
Trigger: GCAGCCCAGAATCTGAGAGCAGAGGCCCTGGTCCCA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTCGTGGGATCGATGCTaGTCCTCCAGGGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKSWDRC*SSRELW
Trigger: CCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCAAGAGGGATGAAGCCTaGCACACTGCAGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAKRDEA*HTAGGP
Trigger: AGGACCACCTGCAGTGTGGCAGGCTTCATCCCTCTT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCCGACCCTCCAGTCCTaGTCCTTCCAACCCCGACAC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRPTLQS*SFQPRH
Trigger: GTGTCGGGGTTGGAAGGAGCAGGACTGGAGGGTCGG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGAGGGCTCAGGACCTTTaGTCTGTCCTGGGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: DALLVGGHCGILSQLKEGRAQDL*SVLGVK
Trigger: CTTAACTCCCAGGACAGAGCAAAGGTCCTGAGCCCT...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp TTGTTCCTGACGCCATTAGCTAGCTTGTCTCCAGCTGGTGGTCTCTGGCCTTCCGTGACCTCTCCCACTTaGAGAGGCAGCAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: LFLTPLASLSPAGGLWPSVTSPT*RGSRQR
Trigger: CCGCTGTCTGCTGCCTCTGCAAGTGGGAGAGGTCAC...GGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCAGAATTTCCATGGGCTaGGGGTGGTCAGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLARISMG*GWSGSL
Trigger: CAGACTCCCTGACCACCCCCAGCCCATGGAAATTCT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGCTGCACGTTTCCCTTaGGCACTCTCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMAARFP*ALSWVG
Trigger: CCCCACCCAGGAGAGTGCCCAAGGGAAACGTGCAGC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp TCTTGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATGCCCTGCTTGTAGGCTCTGGAGAAGAAGCTaGGCTCCTCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SCRLHLDAFSEPGCPACRLWRRS*APPGAG
Trigger: CCCTGCCCCTGGAGGAGCCCAGCTTCTTCTCCAGAG...CCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTATGCAGGGCTGGGCCTaGGACCAGGGCCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSMQGWA*DQGLCS
Trigger: AGAGCAGAGGCCCTGGTCCCAGGCCCAGCCCTGCAT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAGCGATTTCTTCAAGGAACTTaGCTGTTCCCCATCCGTCTC +
Preference number: 4 (lower is better)
Translates to: QLEDVRLLGVMRGGGGQRFLQGT*LFPIRL
Trigger: GAGACGGATGGGGAACAGCCAAGTTCCTTGAAGAAA...TCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATCTCTGGCCTTCCTCTaGGGACTGTGCTTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVASLAFL*GLCLGH
Trigger: ATGCCCCAAGCACAGTCCCCAGAGGAAGGCCAGAGA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAGCGAAATGGTGGAAGCGTCTaGAGAACTGGTAGAGGATTC +
Preference number: 4 (lower is better)
Translates to: QLEDVRLLGVMRGGGGQRNGGSV*RTGRGF
Trigger: GAATCCTCTACCAGTTCTCCAGACGCTTCCACCATT...TCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp TTGTTCCTGACGCCATTAGCTAGCTTGTCTCCAGCTGGTGGTCTCTGGCCTTCCTCTTGGTGTAATGCGTaGCGGGGGTGGCCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: LFLTPLASLSPAGGLWPSSWCNA*RGWPAS
Trigger: ACTCGCTGGCCACCCCCGCCACGCATTACACCAAGA...GGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp TTGTTCCTGACGCCATTAGCTAGCTTGTCTCCAGCTGGTGGTCTCTGGCCTTCCAGGGACGGGCTCGAGTaGGACTTCTTCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LFLTPLASLSPAGGLWPSRDGLE*DFFRLS
Trigger: GCTCAGCCTGAAGAAGTCCCACTCGAGCCCGTCCCT...GGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp AAATGCCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCTCCTGGGACGATGCAGATCTCAGGTCTACCCTaGAGCAGGGAACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KCLSCGVEAAGCPPGTMQISGLP*SREQCL
Trigger: GAGACACTGTTCCCTGCTCCAGGGTAGACCTGAGAT...CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGAGCAAGACCATCCTTaGGGCTGTGGCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPEQDHP*GCGSPG
Trigger: GCCAGGGGAGCCACAGCCCCAAGGATGGTCTTGCTC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGGCCTAGGCCTCGCCTaGTCGCCAGCCTCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPGLGLA*SPASVP
Trigger: TGGGACGGAGGCTGGCGACCAGGCGAGGCCTAGGCC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGAGAACAAGCCCAGCTaGGAGGCAGCCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRENKPS*EAARGQ
Trigger: CTGCCCTCTGGCTGCCTCCCAGCTGGGCTTGTTCTC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCTGAATCAGCATCCCTaGGTGTGGGCTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLALNQHP*VWAGNV
Trigger: CACATTCCCAGCCCACACCCAGGGATGCTGATTCAG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGCTGAGGGGAACAGTTaGTCACAGGCTTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAAEGNS*SQACGE
Trigger: CTCTCCACAAGCCTGTGACCAACTGTTCCCCTCAGC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCAGAAGCACTGTTCTCTaGGCAAGGACTCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLARSTVL*ARTRQE
Trigger: TTCCTGGCGAGTCCTTGCTCAGAGAACAGTGCTTCT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCCTGAGCTGTGGTGTTaGAGCTGCGGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLPELWC*SCGLPS
Trigger: GGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCTTGGGCAAAATGCCTaGGCTGTGGTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLALGQNA*AVVLKL
Trigger: CAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCAGGCGATAGAGGCGTaGGGCCAAGTTCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRQAIEA*GQVPGY
Trigger: GTAGCCTGGAACTTGGCCTCACGCCTCTATCGCCTG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGATTCGCTCCCGTTCCTaGGTCTCCCCACTGAGCACC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMIRSRS*VSPLST
Trigger: GGTGCTCAGTGGGGAGACTCAGGAACGGGAGCGAAT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGTGGGATCCTGAGCCAGCTGAAGGAAGGGCTTGCTCATCTTGCCAGCTGGCAGTAGGTTCTGCGCTCTaGGATGTTGCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LWDPEPAEGRACSSCQLAVGSAL*DVALHL
Trigger: AAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTAC...TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTAGCCAGAGGGCAGGATaGGGGGATTTCCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSSQRAG*GDFPGE
Trigger: CTCCCCTGGGAAATCCCCTCATCCTGCCCTCTGGCT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTAGAGCCCCAAGTCCATaGGTCTCCGGAACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRRAPSP*VSGTSL
Trigger: GAGGGAGGTTCCGGAGACTCATGGACTTGGGGCTCT...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGAAGGTCCTGGTTCGGTaGTGGCACAGGGGCACACAT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKKVLVR*WHRGTH
Trigger: ATGTGTGCCCCTGTGCCATCACCGAACCAGGACCTT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGGCAGGAGAATGGCGTaGACTCGGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMGRRMA*TREAEL
Trigger: AAGCTCTGCCTCCCGAGTTCACGCCATTCTCCTGCC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGTCCACACACGGTGCTaGAGATGGAGCAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKVHTRC*RWSRTK
Trigger: CTTGGTCCTGCTCCATCTGCAGCACCGTGTGTGGAC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGAAAGGACCTCCTCTCTaGCAGCCCTCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKKGPPL*QPSGLR
Trigger: TCTCAGCCCTGAGGGCTGGCAGAGAGGAGGTCCTTT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTTCCTCTGGGGACTGTaGTTGGGGCATAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRFLWGL*LGHRAP
Trigger: GGGAGCCCTATGCCCCAAGCACAGTCCCCAGAGGAA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGTGGCCAGCGAGTGGTaGACCCCCACGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICVASEW*TPTGSS
Trigger: GGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCAC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp TCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTGGGCAAAATGTCCTTCCGCAGGCGGTaGTCCTCCAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SVSKSEDCEASSVHLGKMSFRRR*SSSSRP
Trigger: TGGCCGCGAGCTGGAGGAGCACCGCCTGCGGAAGGA...CATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTCCTTCCGCAGGCGGTaGTCCTCCAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICSFRRR*SSSSRP
Trigger: TGGCCGCGAGCTGGAGGAGCACCGCCTGCGGAAGGA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGCAGGTGGTCCTAGCTaGCTGACCTCCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMAGGPS*LTSLPH
Trigger: GTGAGGAAGGGAGGTCAGGCAGCTAGGACCACCTGC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGCAACCTCAGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMATSAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGGTTGC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCTGAGGAAGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLALRKEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCTTCCTCAG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTCCGGTGGATCCTCATaGCTGCACGTTTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKSGGSS*LHVSLG
Trigger: CCCAAGGGAAACGTGCAGCCATGAGGATCCACCGGA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTCTCTCAGCCATGCCTaGCCCTCTCCCTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRSLSHA*PSPSGS
Trigger: TGAGCCTGAGGGAGAGGGCCAGGCATGGCTGAGAGA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTATGAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCATGCAGGGCTGGGCCTaGGACCAGGGCCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VMNSWQLMLFPMFCPCRSMQGWA*DQGLCS
Trigger: AGAGCAGAGGCCCTGGTCCCAGGCCCAGCCCTGCAT...GGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTCATAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTCCTCGCCTGGTTTTaGGGCCTCCCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GCSPSVSKSEDCEASSVHFLAWF*GLPCLL
Trigger: AAGGAGGCAGGGGAGGCCCCAAAACCAGGCGAGGAA...GTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTTCCTCGCCTGGTTTTaGGGCCTCCCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMFLAWF*GLPCLL
Trigger: AAGGAGGCAGGGGAGGCCCCAAAACCAGGCGAGGAA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCATCCCCGGATTGCAATaGTGGAAGCGTCTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAIPGLQ*WKRLEN
Trigger: GTTCTCCAGACGCTTCCACCATTGCAATCCGGGGAT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGGGCCTTCTCAGGTCTaGCTGTGTCTTCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAGPSQV*LCLLHP
Trigger: TGGATGAAGAAGACACAGCCAGACCTGAGAAGGCCC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTAGACGTGCGGCTTCTTaGTGTAATGCGTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRRRAAS*CNAWRG
Trigger: CCCCCGCCACGCATTACACCAAGAAGCCGCACGTCT...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGGCCCACGGGCAGGATaGGCCGCACGAATCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICGPRAG*AARICA
Trigger: AGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGGCCCACGGGCAGGATaGGCCGCACGAATCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQGPRAG*AARICA
Trigger: AGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTCACCTTGGCCGTGGTaGGAGCCTCATCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMSPWPW*EPHPGA
Trigger: TGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTCACCTTGGCCGTGGTaGGAGCCTCATCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPSPWPW*EPHPGA
Trigger: TGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCTTCACCTTGGCCGTaGTGGGAGCCTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPASPWP*WEPHPG
Trigger: ACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGGCCACTCTGGATTCTaGGGCCTGGAGGGTGACATG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMGHSGF*GLEGDM
Trigger: CATGTCACCCTCCAGGCCCCAGAATCCAGAGTGGCC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGAGCAAGACCATCCTTaGGGCTGTGGCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSEQDHP*GCGSPG
Trigger: GCCAGGGGAGCCACAGCCCCAAGGATGGTCTTGCTC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAAAAGTCTCCCGAGCCTaGCCTAGGCCTCGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSKVSRA*PRPRLV
Trigger: GACCAGGCGAGGCCTAGGCCAGGCTCGGGAGACTTT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTAGAGACAATGGTGGCTaGTCCCTCCGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSRDNGG*SLRPSL
Trigger: GAGGCTGGGCCGGAGGGACCAGCCACCATTGTCTCT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGCAGAGGCCCCCTCTTaGCGGGCAGCCTACTTGCAC +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLAEAPS*RAAYLH
Trigger: GTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGTTCCATACCTAGGATaGGGACTGGAGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAVPYLG*GLEPAQ
Trigger: CTGAGCAGGCTCCAGTCCCCATCCTAGGTATGGAAC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTCCCACTCAAGGGCCTaGCCACTGGGGCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPSHSRA*PLGQDQ
Trigger: CTGATCTTGCCCCAGTGGCCAGGCCCTTGAGTGGGA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCATAGGCCTGGGAGATaGAGCCCCCAAAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAHRPGR*SPQKNK
Trigger: CTTGTTCTTTTGGGGGCTCCATCTCCCAGGCCTATG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGCTGAGGCAGGAGAATaGCGTGAACTCGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMAEAGE*RELGRQ
Trigger: CTGCCTCCCGAGTTCACGCCATTCTCCTGCCTCAGC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCTGAGGCAGGAGAATaGCGTGAACTCGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPAEAGE*RELGRQ
Trigger: CTGCCTCCCGAGTTCACGCCATTCTCCTGCCTCAGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp CAGGCTACCTTGTTGTTCCTGACGCCATTAGCTAGCTaGTCTCCAGCTGGTGGTCTCTGGCCTTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QATLLFLTPLAS*SPAGGLWPSSG
Trigger: CCCAGAGGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAACAAGGTAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCCCTCACTCTCCCCGTaGCCAGGAGGTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICPSLSP*PGGAAG
Trigger: TCCTGCAGCACCTCCTGGTCACGGGGAGAGTGAGGG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGCCAGCCCTCAGGGCTaGGAGAGGCCCAAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQASPQG*ERPKVA
Trigger: TGCAACCTTGGGCCTCTCTCAGCCCTGAGGGCTGGC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGAGGGTGACATGGGCTaGGCTCTGGGAGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPREGDMG*ALGGKS
Trigger: TGACTTTCCTCCCAGAGCTCAGCCCATGTCACCCTC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCAGCAAGTCTAGGAAATaGGGCCACTCTGGATTCTGG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLASKSRK*GHSGFW
Trigger: CCAGAATCCAGAGTGGCCTCATTTCCTAGACTTGCT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTAGAGCCCCAAGTCCATaGGTCTCCGGAACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSRAPSP*VSGTSL
Trigger: GAGGGAGGTTCCGGAGACTCATGGACTTGGGGCTCT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTGGAGCAAAGAGGGATaGAGCCTGCCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRWSKEG*SLPHCR
Trigger: CCTGCAGTGTGGCAGGCTTCATCCCTCTTTGCTCCA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTTCCACGTGCTCAGGTaGAAGAGAGGTGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKFHVLR*KRGAGS
Trigger: AGAACCGGCACCTCTCTTTCACCTGAGCACGTGGAA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTATTGGAGACCCTGTATaGTCTGGCCTCAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPIGDPV*SGLRPP
Trigger: GGGTGGCCTGAGGCCAGATCATACAGGGTCTCCAAT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGTTGGCTCACGCCTGTaGTCCCAATGCTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMVGSRL*SQCFGR
Trigger: CCTCCCAAAGCATTGGGATCACAGGCGTGAGCCAAC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCTGTCCTCCAAGCCCTaGGCTTGGCACTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKLSSKP*AWHSSL
Trigger: AAGAGAAGAGTGCCAAGCTCAGGGCTTGGAGGACAG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGCCCCAGTGGGCCCATaGAGGAGAGAGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKAPVGP*RREVCG
Trigger: GCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCATGGCGGAAGAAGGCTaGGAAGGCATCAGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAMAEEG*EGIRVD
Trigger: ATCAACTCTGATGCCTTCTCAGCCTTCTTCCGCCAT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAAGGTCGCTGAGAGGTaGTGGCGGAAGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMKVAER*WRKKAE
Trigger: CTCAGCCTTCTTCCGCCATCACCTCTCAGCGACCTT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGGCAGGAGAATGGCGTaGACTCGGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSGRRMA*TREAEL
Trigger: AAGCTCTGCCTCCCGAGTTCACGCCATTCTCCTGCC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGTGCCCCGGAGCATCTaGTTTCACGGTCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPVPRSI*FHGLTV
Trigger: CACAGTGAGACCGTGAAAGCAGATGCTCCGGGGCAC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTCAGTGGCCCAGGTTTaGTCCTCGAAAGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMSVAQV*SSKGSG
Trigger: ACCGGAGCCTTTCGAGGAGCAAACCTGGGCCACTGA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGGTGATGCTGTGTTCTaGCTGTGCTCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPGDAVF*LCSLWA
Trigger: TGCCCAGAGGGAGCACAGGCAGAACACAGCATCACC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCTACCTGTGTGGACGTaGTCCGGTTCTGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMLPVWT*SGSALG
Trigger: GCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTCTGGGCCTGCAGGATaGCTGCCCAGAACACTACCT +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPSGPAG*LPRTLP
Trigger: AGGTAGTGTTCTGGGCAGGCATCCTGCAGGCCCAGA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTCCCTCTCTCAGCCATaGCTGGCCCTCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSLSQP*LALSLR
Trigger: CCTGAGGGAGAGGGCCAGGCATGGCTGAGAGAGGGA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGTGACCAGGAGGTGCTaGAGGAGCCCCCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSVTRRC*RSPLSG
Trigger: GCCGCTGAGGGGGCTCCTGCAGCACCTCCTGGTCAC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTGGGCAAAATGCGTTGAAGCTGCGGGCTaGCCTCCTGGGACGATGCAG +
Preference number: 4 (lower is better)
Translates to: PSPRVKTVKHLVSTWAKCVEAAG*PPGTMQ
Trigger: CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAAC...GCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp TTGTTCCTGACGCCATTAGCTAGCTTGTCTCCAGCTGGTGGTCTCTGGCCTTCCGCTGAAGGAAGGGCTTaGTCATCTTGCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LFLTPLASLSPAGGLWPSAEGRA*SSCQLA
Trigger: TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGC...GGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp CTGGCCTCCAAACTGGAAGAAGGACAGGTACTCCTCAGCCACAGCCCTGCTAAATTTTCCGAGCCAGGATaGCCTGCTTGTAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LASKLEEGQVLLSHSPAKFSEPG*PACRWA
Trigger: TGCCCACCTACAAGCAGGGCATCCTGGCTCGGAAAA...TTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAGTTTGGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTCTTCCAGCCACGCTTaGCCCATGGCGTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMSSSHA*PMASSC
Trigger: GCAAGAAGACGCCATGGGGCAAGCGTGGCTGGAAGA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGTGGCCAGCGAGTGGTaGACCCCCACGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSVASEW*TPTGSS
Trigger: GGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCAC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTCCTTCCGCAGGCGGTaGTCCTCCAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFSFRRR*SSSSRP
Trigger: TGGCCGCGAGCTGGAGGAGCACCGCCTGCGGAAGGA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGCTTGGGCTCCCGAGTaGCTCCAGCTTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICAWAPE*LQLPSP
Trigger: TGGGGAGGGAAGCTGGAGGCACTCGGGAGCCCAAGC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTGCGCTCTGAGATGTTaGGCTTCACCTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMCALRC*ASPWPW
Trigger: CCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCCCAGGGGCCTCTGCTaGCCCAAGCTCTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFPRGLC*PKLSPR
Trigger: TCTGGGGGAGAGCTTGGGGCAGCAGAGGCCCCTGGG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCCCAGCCCTCACTCATaGCATCAGCTCTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKPSPHS*HQLCSV
Trigger: AACAGAGCAGAGCTGATGGCATGAGTGAGGGCTGGG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGGTTCCAGGGTTCCCTaGAAAGCTCTGGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSGSRVP*KALEAP
Trigger: TGGGGCCTCCAGAGCTTTGCAGGGAACCCTGGAACC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCTTACTTTGTGGAGGTaGAAGCCCCAGAGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLALTLWR*KPQSWL
Trigger: TAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGCAGGTGGTCCTAGCTaGCTGACCTCCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSAGGPS*LTSLPH
Trigger: GTGAGGAAGGGAGGTCAGGCAGCTAGGACCACCTGC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGAAGAGGAGCCAGTGTaGCGGCTGAGGGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPREEEPV*RLRGTV
Trigger: AACTGTTCCCCTCAGCCGGCACACTGGCTCCTCTTC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GAACTGGTAGAGGATTCGCTCCCGTTCCTGAGTCTCCCCACTGAGCACCAAGGCGAGTTAAGAGTCACCTaGGGCCAAAAAGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: ELVEDSLPFLSLPTEHQGELRVT*GQKGPP
Trigger: AGGAGGTCCTTTTTGGCCCCAGGTGACTCTTAACTC...GCCTTGGTGCTCAGTGGGGAGACTCAGGAACGGGAGCGAATCCTCTACCAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAATGCAGGGCTGGGCCTaGGACCAGGGCCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQMQGWA*DQGLCS
Trigger: AGAGCAGAGGCCCTGGTCCCAGGCCCAGCCCTGCAT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp TCTTGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATGCCCTGCTTGTAGGTCTCTGGCCTTCCTCTaGGGACTGTGCTTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SCRLHLDAFSEPGCPACRSLAFL*GLCLGH
Trigger: ATGCCCCAAGCACAGTCCCCAGAGGAAGGCCAGAGA...CCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACTCTGGCCTCCAAACTaGAAGAAGGACAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVALWPPN*KKDRYS
Trigger: GGAGTACCTGTCCTTCTTCCAGTTTGGAGGCCAGAG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTCTTCTTCATCCACGGCCCACTCGAGCTTCTCGCTGCGGATAGACCAGTAGAGATCCCCGGATTGCAATaGTGGAAGCGTCTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VFFIHGPLELLAADRPVEIPGLQ*WKRLEN
Trigger: GTTCTCCAGACGCTTCCACCATTGCAATCCGGGGAT...CTCTACTGGTCTATCCGCAGCGAGAAGCTCGAGTGGGCCGTGGATGAAGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAATGCGTGGCGGGGGTaGCCAGCGAGTGGTGCACCC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSNAWRG*PASGAP
Trigger: GGGTGCACCACTCGCTGGCCACCCCCGCCACGCATT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGCTTCACCTTGGCCGTaGTGGGAGCCTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSASPWP*WEPHPG
Trigger: ACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTGTTGCGCTTCACCTTaGCCGTGGTGGGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPCCASP*PWWEPH
Trigger: ATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGCAGAGGCCCCCTCTTaGCGGGCAGCCTACTTGCAC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICAEAPS*RAAYLH
Trigger: GTGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACAGCATCCCTGGGTGTaGGCTGGGAATGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAQHPWV*AGNVSF
Trigger: AAAAGACACATTCCCAGCCCACACCCAGGGATGCTG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTAGAGGCTTCCCTAGATaGTGGGAGTCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSRGFPR*WESWPR
Trigger: CCTGGGCCAGGACTCCCACCATCTAGGGAAGCCTCT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGTGATCCCAATGCTTTaGGAGGCCGAGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPVIPML*EAEAAG
Trigger: TCCAGCTGCCTCGGCCTCCCAAAGCATTGGGATCAC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGCTGGTGAGGGGGCATaGGCATCAGAAAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMAGEGA*ASEKLR
Trigger: CCTCAGCTTTTCTGATGCCCATGCCCCCTCACCAGC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGGAGGGGAGCAGACGTaGGGTAAGTCTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSGGEQT*GKSGEA
Trigger: AGCCTCACCAGACTTACCCCACGTCTGCTCCCCTCC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGGAGGCCAGGAGTGGTaGGCAAGACTGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSGGQEW*ARLSAS
Trigger: GCTTGCTGACAGTCTTGCCCACCACTCCTGGCCTCC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGGAGGCCAGGAGTGGTaGGCAAGACTGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSGGQEW*ARLSAS
Trigger: GCTTGCTGACAGTCTTGCCCACCACTCCTGGCCTCC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGTCACAATTCCTAGCTaGGTCCAACTCAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAVTIPS*VQLRVR
Trigger: TCTGACCCTGAGTTGGACCCAGCTAGGAATTGTGAC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp ACGCTTGCCCCATGGCGTCTTCTTGCCGTCTGCATCTaGATGCATTTTCCGAGCCAGGATGCCCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: TLAPWRLLAVCI*MHFPSQDALLV
Trigger: TACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGAAGACGCCATGGGGCAAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTCACCCATCATCCACTaGGCAAAAGCTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRSPIIH*AKAAQE
Trigger: CTCCTGGGCAGCTTTTGCTCAGTGGATGATGGGTGA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTGGCCGCAGCCAAGTTaGTGCGCGCGATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSWPQPS*CARSRS
Trigger: GCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGGGACTTCTTCAGGCTaGGCTTGGGCTCCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPGTSSG*AWAPEC
Trigger: GCACTCGGGAGCCCAAGCTCAGCCTGAAGAAGTCCC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTGCTGGCTTCACAGCTaGTTGCGGTTCCGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSCWLHS*LRFRLG
Trigger: CCCTAAGCGGAACCGCAATCAGCTGTGAAGCCAGCA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACCCTCACAACTCTCCTaGGCTGTGGCTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKPSQLS*AVAPAR
Trigger: CCTGGCAGGAGCCACAGCTCAGGAGAGTTGTGAGGG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGCCAGAGGGCAGGATaGGGGGATTTCCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICSQRAG*GDFPGE
Trigger: CTCCCCTGGGAAATCCCCTCATCCTGCCCTCTGGCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGGTGCCGGTTCTACATaGGCAAAGGAGCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAGAGST*AKEHQS
Trigger: ACTTTGATGCTCCTTTGCTCATGTAGAACCGGCACC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTTCCACGTGCTCAGGTaGAAGAGAGGTGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMFHVLR*KRGAGS
Trigger: AGAACCGGCACCTCTCTTTCACCTGAGCACGTGGAA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCAGGACCCTGGAAGCTaGGCTCCCCTATATGGGAAA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPQDPGS*APLYGK
Trigger: TTTCCCATATAGGGGAGCTCAGCTTCCAGGGTCCTG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAATTGGAGACCCTGTATaGTCTGGCCTCAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSIGDPV*SGLRPP
Trigger: GGGTGGCCTGAGGCCAGATCATACAGGGTCTCCAAT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGGGCATCAGAAAAGCTaGGGGGCAGAGGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSGHQKS*GAEVLA
Trigger: TGCCAACACCTCTGCCCCTCAGCTTTTCTGATGCCC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTAAGGCCAAAGGTCGCTaGGAGGTGATGGCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRKAKGR*EVMAEE
Trigger: TTCTTCCGCCATCACCTCTCAGCGACCTTTGGCCTT...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGGAAGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTTCC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTCAGTGGCCCGGGTTTaGTCCTGGCAAGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICSVARV*SWQGSS
Trigger: GCTGGAGCCTTGCCAGGAGCAAACCCGGGCCACTGA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAACACACATCTGGGCCTaGAGGATGCCTGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSTHIWA*RMPAQN
Trigger: GTTCTGGGCAGGCATCCTGCAGGCCCAGATGTGTGT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTCCCTCTCTCAGCCATaGCTGGCCCTCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICSLSQP*LALSLR
Trigger: CCTGAGGGAGAGGGCCAGGCATGGCTGAGAGAGGGA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCCCGTGACCAGGAGGTaGTGCAGGAGCCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLPVTRR*CRSPLS
Trigger: GCTGAGGGGGCTCCTGCAGCACCTCCTGGTCACGGG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCCCGTGACCAGGAGGTaGTGCAGGAGCCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQPVTRR*CRSPLS
Trigger: GCTGAGGGGGCTCCTGCAGCACCTCCTGGTCACGGG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCGTGTTAGAGAGGCCCAAGGTTaGACAGGATGTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EFLAAHALPNVLSMQVRVREAQG*TGCAAG
Trigger: CCCTGCTGCACATCCTGTGCAACCTTGGGCCTCTCT...AACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGTTGAAGCTGCGGGCTaGCCTCCTGGGACGATGCAG +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPVEAAG*PPGTMQ
Trigger: CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAAC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAACTGGTAGAGGATTCGCTCCCGTTCCTGAGTCTCCCCACTGAGCACCAAGGCTCCACTTGGGCAAAATaGCTGAGCTGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ELVEDSLPFLSLPTEHQGSTWAK*LSCGVE
Trigger: TTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGA...GCCTTGGTGCTCAGTGGGGAGACTCAGGAACGGGAGCGAATCCTCTACCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GTCTTCTTCATCCACGGCCCACTCGAGCTTCTCGCTGCGGATAGACCAGTAGAGCCAATGTTCTGTCCATaGAGGTCCGTGTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VFFIHGPLELLAADRPVEPMFCP*RSVLSS
Trigger: GCTGCTTAACACGGACCTGCATGGACAGAACATTGG...CTCTACTGGTCTATCCGCAGCGAGAAGCTCGAGTGGGCCGTGGATGAAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGCTTCCCTCCCCAGCTaGTCCTCCCACAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPASLPS*SSHRSR
Trigger: TCTGGACCTGTGGGAGGAGCAGCTGGGGAGGGAAGC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTAGCAGGGAAAGGAGGTaGCTCATCCGTCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRSRERR*LIRHGG
Trigger: TCCACCATGACGGATGAGGCACCTCCTTTCCCTGCT...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCTCATGCCATCAGCTCTaGTCTGTTGATGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLASCHQL*SVDEQL
Trigger: CAACTGCTCATCAACAGAGCAGAGCTGATGGCATGA...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTAAGAGGGATGAAGCCTaGCACACTGCAGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRKRDEA*HTAGGP
Trigger: AGGACCACCTGCAGTGTGGCAGGCTTCATCCCTCTT...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTTACCCAGGCTGGAGTaGAATGGCGCAACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMLPRLE*NGATSA
Trigger: AGCTGAGGTTGCGCCATTGCACTCCAGCCTGGGTAA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCCAAGCAGGATGGCATaGATGAGGGCAGAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRPSRMA*MRAEPK
Trigger: CTTAGGCTCTGCCCTCATGCATGCCATCCTGCTTGG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCTCTGGGCTGTGTCCTaGAGGAAGATCCAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPLWAVS*RKIQGG
Trigger: ACCACCTTGGATCTTCCTGCAGGACACAGCCCAGAG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGGACCCAAGAATGGATaGCTTGGCCTGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLGPKNG*LGLGSP
Trigger: TGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCAAAGGACCCAAGAATaGATGGCTTGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRQRTQE*MAWPGL
Trigger: GAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCATTCTCAGGTGGGCTaGAGTGCAGGCCCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICHSQVG*SAGPCP
Trigger: GGGACACGGGCCTGCACTCCAGCCCACCTGAGAATG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCATTCTCAGGTGGGCTaGAGTGCAGGCCCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPHSQVG*SAGPCP
Trigger: GGGACACGGGCCTGCACTCCAGCCCACCTGAGAATG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGATGGGCACAGGGAATaGAGGGGTACAATGCCCACT +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRDGHRE*RGTMPT
Trigger: AGTGGGCATTGTACCCCTCCATTCCCTGTGCCCATC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACCAGCAGATGGAGTGTaGTTTATAGATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAPADGV*FIDGHR
Trigger: CCTGTGCCCATCTATAAACCACACTCCATCTGCTGG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGACACGGTGCTGCAGATaGAGCAGGACCAAGCCTATC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMTRCCR*SRTKPI
Trigger: GATAGGCTTGGTCCTGCTCCATCTGCAGCACCGTGT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCATCTAGTGTCCACTTaGGCAAAATGCCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAHLVST*AKCLSC
Trigger: ACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTCTTGTCTCCAGCTGGTaGTCTCTGGCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSLVSSW*SLAFLW
Trigger: CCAGAGGAAGGCCAGAGACCACCAGCTGGAGACAAG...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCTGGACGTCTCCAGTCTCTGCAGGCCTGGCTGTTCCTTCACTCTTTACTTCCTCTCTGGCCTCCAAACTaGAAGAAGGACAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: AGRLQSLQAWLFLHSLLPLWPPN*KKDRYS
Trigger: GGAGTACCTGTCCTTCTTCCAGTTTGGAGGCCAGAG...AGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGATCCCCGGATTGCAATaGTGGAAGCGTCTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKIPGLQ*WKRLEN
Trigger: GTTCTCCAGACGCTTCCACCATTGCAATCCGGGGAT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCTGGACGTCTCCAGTCTCTGCAGGCCTGGCTGTTCCTTCACTCTTTACTTCCTGGGCCTTCTCAGGTCTaGCTGTGTCTTCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: AGRLQSLQAWLFLHSLLPGPSQV*LCLLHP
Trigger: TGGATGAAGAAGACACAGCCAGACCTGAGAAGGCCC...AGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTGTAGGTGGGCACTGTaGGATCCTGAGCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GCSPSVSKSEDCEASSVHCRWAL*DPEPAE
Trigger: TTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACA...GTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGGAGCTCATCTCCTTaGCAGTGGGTGCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPRSSSP*QWVPGR
Trigger: TCTTCCAGGCACCCACTGCCAAGGAGATGAGCTCCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATCCAGGCAGTTCTCGTaGGATCGATGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSSRQFS*DRCCSS
Trigger: GGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTGGGCAAAATGCTCACCTTGGCCGTGGTaGGAGCCTCATCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PSPRVKTVKHLVSTWAKCSPWPW*EPHPGA
Trigger: TGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGA...GCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GTTATGAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCGCTTCACCTTGGCCGTaGTGGGAGCCTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: VMNSWQLMLFPMFCPCRSASPWP*WEPHPG
Trigger: ACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGC...GGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTCATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGGACTGCCATGGGGGTaGTGGGGAGCACAGCAATAT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSGLPWG*WGAQQY
Trigger: ATATTGCTGTGCTCCCCACCACCCCCATGGCAGTCC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCACCTCCCTCTTCCCTTaGGCGTGGCCAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFTSLFP*AWPGTG
Trigger: CCCAGTCCCTGGCCACGCCCAAGGGAAGAGGGAGGT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCTGAGCTGCCAGAGATaGGGAAGGGGTCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPLSCQR*GRGPGT
Trigger: GGTGCCTGGACCCCTTCCCCATCTCTGGCAGCTCAG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAGAGACAATGGTGGCTaGTCCCTCCGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQRDNGG*SLRPSL
Trigger: GAGGCTGGGCCGGAGGGACCAGCCACCATTGTCTCT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTGCAAGCCCCAGAGCTaGTTACAAGCATGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRCKPQS*LQAWEG
Trigger: CCCTTCCCATGCTTGTAACCAGCTCTGGGGCTTGCA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGCCAACCTTACTTTGTaGAGGTGCAAGCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMANLTL*RCKPQS
Trigger: GCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACCGGAGACCCAAACATaGCCTCCAAGGGCCAACCTT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSPETQT*PPRANL
Trigger: AAGGTTGGCCCTTGGAGGCCATGTTTGGGTCTCCGG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACCTAGCCCTAGGCCCTaGCCGGAGACCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKPSPRP*PETQTW
Trigger: CCATGTTTGGGTCTCCGGCCAGGGCCTAGGGCTAGG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACCTAGCCCTAGGCCCTaGCCGGAGACCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQPSPRP*PETQTW
Trigger: CCATGTTTGGGTCTCCGGCCAGGGCCTAGGGCTAGG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACACCCATTGGGTGCATaGCCTAGCCCTAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQHPLGA*PSPRPW
Trigger: CCAGGGCCTAGGGCTAGGCCATGCACCCAATGGGTG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCTGAATCAGCATCCCTaGGTGTGGGCTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPLNQHP*VWAGNV
Trigger: CACATTCCCAGCCCACACCCAGGGATGCTGATTCAG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCCTGGAGCAACCCTGTaGGGAGCTGTAGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPPGATL*GAVGCP
Trigger: GGGACAGCCTACAGCTCCCCACAGGGTTGCTCCAGG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGTTCCATACCTAGGATaGGGACTGGAGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRVPYLG*GLEPAQ
Trigger: CTGAGCAGGCTCCAGTCCCCATCCTAGGTATGGAAC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGCTGGTGAGGGGGCATaGGCATCAGAAAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSAGEGA*ASEKLR
Trigger: CCTCAGCTTTTCTGATGCCCATGCCCCCTCACCAGC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTTGGTCACAGGCTTGTaGAGAGCACCTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKLVTGL*RAPLPL
Trigger: CAGAGGAAGAGGTGCTCTCCACAAGCCTGTGACCAA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTCTCAAAGAGCCCCAGTaGGCCCATGAAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSLKEPQ*AHEGER
Trigger: CCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAG...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGAGAGCCAGGTATGAATaGGAACCTGGTAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKRARYE*EPGKGW
Trigger: CCAGCCCTTACCAGGTTCCCATTCATACCTGGCTCT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCAGGCTCAGTTTCTCTaGGCTGTGTCCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMQAQFL*AVSCRK
Trigger: CTTCCTGCAGGACACAGCCCAGAGAAACTGAGCCTG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp CTGCACATTCACAAAAAGCCACTCTCCTTGGCTGCATaGGAGACCCTGTATGATCTGGCCTCAGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LHIHKKPLSLAA*ETLYDLASGHP
Trigger: AGGGTGGCCTGAGGCCAGATCATACAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTTTGTGAATGTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp TTGGGGAAGTTCCCGCCATCCCTCAGCCCATTCAGGTaGGTTATGAATTCCTGGCAGCTCATGCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGKFPPSLSPFR*VMNSWQLMLFP
Trigger: TGGGAAGAGCATGAGCTGCCAGGAATTCATAACCAACCTGAATGGGCTGAGGGATGGCGGGAACTTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCTCCCAAGTACAGGTTaGGAATTTCCATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRLPSTG*EFPWAG
Trigger: CCCAGCCCATGGAAATTCTCAACCTGTACTTGGGAG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGAAGCACTGTTCTCTaGGCAAGGACTCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPRSTVL*ARTRQE
Trigger: TTCCTGGCGAGTCCTTGCTCAGAGAACAGTGCTTCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCTCAGCGGCAGCCACTaGGGCCCAGCAGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLLSGSH*GPADGV
Trigger: CACTCCATCTGCTGGGCCTCAGTGGCTGCCGCTGAG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCAGGCGATAGAGGCGTaGGGCCAAGTTCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICQAIEA*GQVPGY
Trigger: GTAGCCTGGAACTTGGCCTCACGCCTCTATCGCCTG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAATTCGCTCCCGTTCCTaGGTCTCCCCACTGAGCACC +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKIRSRS*VSPLST
Trigger: GGTGCTCAGTGGGGAGACTCAGGAACGGGAGCGAAT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACATTCAGGTTGGTTATaGATTCCTGGCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAHSGWL*IPGSSC
Trigger: GCATGAGCTGCCAGGAATTCATAACCAACCTGAATG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGGGACTTCTTCAGGCTaGGCTTGGGCTCCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSGTSSG*AWAPEC
Trigger: GCACTCGGGAGCCCAAGCTCAGCCTGAAGAAGTCCC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTTTCTCAAGAGTCCCTaGTTCACTCTCCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMFLKSP*FTLLGP
Trigger: AGGCCCCAGGAGAGTGAATCAGGGACTCTTGAGAAA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTTTCTCAAGAGTCCCTaGTTCACTCTCCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPFLKSP*FTLLGP
Trigger: AGGCCCCAGGAGAGTGAATCAGGGACTCTTGAGAAA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGGTGCCGGTTCTACATaGGCAAAGGAGCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKGAGST*AKEHQS
Trigger: ACTTTGATGCTCCTTTGCTCATGTAGAACCGGCACC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTACCATCATCTGGCTCTaGAGATTCCACGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPTIIWL*RFHVLR
Trigger: CCTGAGCACGTGGAATCTTCAGAGCCAGATGATGGT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACCATTCAAGAAACCTTaGGGATCTGTGAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAPFKKP*GSVSMP
Trigger: AGGCATGCTCACAGATCCTCAAGGTTTCTTGAATGG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGCCCCAGTGGGCCCATaGAGGAGAGAGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQAPVGP*RREVCG
Trigger: GCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGATGGCGGAAGAAGGCTaGGAAGGCATCAGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKMAEEG*EGIRVD
Trigger: ATCAACTCTGATGCCTTCTCAGCCTTCTTCCGCCAT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATTCCAGAAACTATCTTaGAAGCCCAGCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAFQKLS*KPSSQP
Trigger: TGGCTGACTGCTGGGCTTTCAAGATAGTTTCTGGAA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGGAAGAAGGACAGGTACTCCTCAGCCACAGCCCTGCTAAAGTCATTGTTCTTAGGAAGAACATGAAGTaGGGCGGGCACAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LEEGQVLLSHSPAKVIVLRKNMK*GGHRAG
Trigger: TCCTGCCCTGTGCCCGCCTCACTTCATGTTCTTCCT...AAGAACAATGACTTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTCAGTGGCCCAGGTTTaGTCCTCGAAAGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSVAQV*SSKGSG
Trigger: ACCGGAGCCTTTCGAGGAGCAAACCTGGGCCACTGA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAAATGGAGGGGTACAATaGCCACTGATAGCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSNGGVQ*PLIAAP
Trigger: CGGCGCTGCTATCAGTGGGCATTGTACCCCTCCATT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGGTTGCACAGGATGTaGAGCAGGGCCAAGATCAGA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPRLHRM*SRAKIR
Trigger: TCTGATCTTGGCCCTGCTGCACATCCTGTGCAACCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGTTGAAGCTGCGGGCTaGCCTCCTGGGACGATGCAG +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFVEAAG*PPGTMQ
Trigger: CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAAC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAACTTGGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGACGTCTCCAGTCTCTaGAGGCCTGGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ELGCSPSVSKSEDCEASSDVSSL*RPGCSF
Trigger: GAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTC...ACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATTCCTCTGGGGACTGTaGTTGGGGCATAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQFLWGL*LGHRAP
Trigger: GGGAGCCCTATGCCCCAAGCACAGTCCCCAGAGGAA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCGTGTTGGAAGATCCCCGGATTaGAATGGTGGAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: EFLAAHALPNVLSMQVRVGRSPD*NGGSVW
Trigger: CCAGACGCTTCCACCATTGCAATCCGGGGATCTTCC...AACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGGGCTTGCTCATCTTaGCAGCTGGCAGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKRACSS*QLAGTA
Trigger: AGCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTCTTCTTCATCCACGGCCCACTCGAGCTTCTCGCTGCGGATAGACCAGTAGAGCGTCTTCTTGCCGTCTaGATCTTGATGCATTTTCCG +
Preference number: 4 (lower is better)
Translates to: VFFIHGPLELLAADRPVERLLAV*ILMHFP
Trigger: CGGAAAATGCATCAAGATGCAGACGGCAAGAAGACG...CTCTACTGGTCTATCCGCAGCGAGAAGCTCGAGTGGGCCGTGGATGAAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCCCATGGCGTCTTCTTaGCGTCTGCATCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMPMASS*RLHLDA
Trigger: TGCATCAAGATGCAGACGGCAAGAAGACGCCATGGG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACTCCTTGGCAGTGGGTaGCTGGAAGAGGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQLLGSG*LEEVEA
Trigger: CGCCTCTACCTCTTCCAGGCACCCACTGCCAAGGAG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTCGTGGGATCGATGCTaGTCCTCCAGGGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICSWDRC*SSRELW
Trigger: CCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGATTGCACATGTCAAGGTGTGTACAGAATCTACTGAGGGGAAGATCCCCGGATCGTGGGATCGATGCTaGTCCTCCAGGGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MIAHVKVCTESTEGKIPGSWDRC*SSRELW
Trigger: CCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGA...TCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGCATCAGAGGGGCAGTaGAGGCGGGCCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKASEGQ*RRATSS
Trigger: GCTGCTGGTGGCCCGCCTGCACTGCCCCTCTGATGC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGCTTCCCTCCCCAGCTaGTCCTCCCACAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSASLPS*SSHRSR
Trigger: TCTGGACCTGTGGGAGGAGCAGCTGGGGAGGGAAGC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp TCTTGCCGTCTGCATCTTGATGCATTTTCCGAGCCAGGATGCCCTGCTTGTAGGTCTTCCGGTAGGTTCTaGGCTCTGAGATGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SCRLHLDAFSEPGCPACRSSGRF*ALRCCA
Trigger: AGCGCAACATCTCAGAGCGCAGAACCTACCGGAAGA...CCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTCTTCCGGTAGGTTCTaGGCTCTGAGATGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRSSGRF*ALRCCA
Trigger: AGCGCAACATCTCAGAGCGCAGAACCTACCGGAAGA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGCAACCTCAGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKATSAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGGTTGC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCAAGGCAGAGCCAAGTaGAAAGCTACCCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPQGRAK*KATQHP
Trigger: TGGATGCTGGGTAGCTTTGCACTTGGCTCTGCCTTG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACCGGGAGGCAGAGGTTaGAGTGAATTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSPGGRG*SELRSC
Trigger: GCACGATCTCAATTCACTGCAACCTCTGCCTCCCGG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGGGCCGCTGGAGAAACTaGGAATCCATATCTACCCTC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMGRWRN*ESISTL
Trigger: GAGGGTAGATATGGATTCCCAGTTTCTCCAGCGGCC...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCACGGTCTCACTGTGTaGACTAGGGGGAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPHGLTV*TRGSTG
Trigger: GCCAGTGCTCCCCCTAGTCCACACAGTGAGACCGTG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATGCCTGTGCTCCCTCTaGGCAGAGGGGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKCLCSL*AEGLPR
Trigger: CCTGGGGAGCCCCTCTGCCCAGAGGGAGCACAGGCA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGAGTTAAGAGTCACCTaGGGCCAAAAAGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKELRVT*GQKGPP
Trigger: AGGAGGTCCTTTTTGGCCCCAGGTGACTCTTAACTC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTCTGCTCTCAGATTCTaGGCTGCTAGGCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMSALRF*AARLWR
Trigger: TCTCCAGAGCCTAGCAGCCCAGAATCTGAGAGCAGA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245796.11
CDS-3UTR CCA 90 bp TTGTTCCTGACGCCATTAGCTAGCTTGTCTCCAGCTGGTGGTCTCTGGCCTTCCCAGTCTCTGCAGGCCTaGCTGTTCCTTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: LFLTPLASLSPAGGLWPSQSLQA*LFLHSL
Trigger: TAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTG...GGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTCTCTGGCCTTCCTCTaGGGACTGTGCTTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSLAFL*GLCLGH
Trigger: ATGCCCCAAGCACAGTCCCCAGAGGAAGGCCAGAGA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCTCTGGCCTCCAAACTaGAAGAAGGACAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPLWPPN*KKDRYS
Trigger: GGAGTACCTGTCCTTCTTCCAGTTTGGAGGCCAGAG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACCCGGATTGCAATGGTaGAAGCGTCTGGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSPGLQW*KRLENW
Trigger: CCAGTTCTCCAGACGCTTCCACCATTGCAATCCGGG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGGGCCTTCTCAGGTCTaGCTGTGTCTTCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRGPSQV*LCLLHP
Trigger: TGGATGAAGAAGACACAGCCAGACCTGAGAAGGCCC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTATGAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCTGCCCTGCTTGTAGGTaGGCACTGTGGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: VMNSWQLMLFPMFCPCRSCPACR*ALWDPE
Trigger: CTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCA...GGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTCATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAATGCGTGGCGGGGGTaGCCAGCGAGTGGTGCACCC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKNAWRG*PASGAP
Trigger: GGGTGCACCACTCGCTGGCCACCCCCGCCACGCATT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTCTTGGTGTAATGCGTaGCGGGGGTGGCCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICSWCNA*RGWPAS
Trigger: ACTCGCTGGCCACCCCCGCCACGCATTACACCAAGA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAGACGTGCGGCTTCTTaGTGTAATGCGTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQRRAAS*CNAWRG
Trigger: CCCCCGCCACGCATTACACCAAGAAGCCGCACGTCT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTCATCTCCTTGGCAGTaGGTGCCTGGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRSSPWQ*VPGRGR
Trigger: TCTACCTCTTCCAGGCACCCACTGCCAAGGAGATGA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGAACAGAGACAATGGTaGCTGGTCCCTCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICEQRQW*LVPPAQ
Trigger: CTGGGCCGGAGGGACCAGCCACCATTGTCTCTGTTC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGCCAACCTTACTTTGTaGAGGTGCAAGCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSANLTL*RCKPQS
Trigger: GCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGTCCCTGGGTGTGGGCTaGGAATGTGTCTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMSLGVG*ECVFSA
Trigger: TGCTGAAAAGACACATTCCCAGCCCACACCCAGGGA...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGAGGCTTCCCTAGATaGTGGGAGTCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKRGFPR*WESWPR
Trigger: CCTGGGCCAGGACTCCCACCATCTAGGGAAGCCTCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCCTGGAGCAACCCTGTaGGGAGCTGTAGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFPGATL*GAVGCP
Trigger: GGGACAGCCTACAGCTCCCCACAGGGTTGCTCCAGG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACCTTCCAGCGTTACCTaGAGCAACCCTGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKPSSVT*SNPVGS
Trigger: GCTCCCCACAGGGTTGCTCCAGGTAACGCTGGAAGG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGACATAGGCCTGTGGTaGTTTGATCTGTTCCATACC +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVADIGLW*FDLFHT
Trigger: GGTATGGAACAGATCAAACCACCACAGGCCTATGTC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCTCAGACATAGGCCTGTaGTGGTTTGATCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLASDIGL*WFDLFH
Trigger: ATGGAACAGATCAAACCACCACAGGCCTATGTCTGA...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTTGGTCACAGGCTTGTaGAGAGCACCTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRLVTGL*RAPLPL
Trigger: CAGAGGAAGAGGTGCTCTCCACAAGCCTGTGACCAA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAGAGCCAGGTATGAATaGGAACCTGGTAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMRARYE*EPGKGW
Trigger: CCAGCCCTTACCAGGTTCCCATTCATACCTGGCTCT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGGAGGGGAGCAGACGTaGGGTAAGTCTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPGGEQT*GKSGEA
Trigger: AGCCTCACCAGACTTACCCCACGTCTGCTCCCCTCC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACAGGAAGATCCAAGGTaGTCACCCTCAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSQEDPR*SPSASA
Trigger: AGCAGAGGCTGAGGGTGACCACCTTGGATCTTCCTG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTCTGCTCTCAGATTCTaGGCTGCTAGGCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRSALRF*AARLSV
Trigger: GACAGAGAGCCTAGCAGCCCAGAATCTGAGAGCAGA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441564.7
CDS-3UTR TCA 90 bp GAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCGTGTTTCTGCAGAAGTCAGGTaGATGTCAGGCTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: EFLAAHALPNVLSMQVRVSAEVR*MSGWTS
Trigger: AGACGTCCAGCCTGACATTCACCTGACTTCTGCAGA...AACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTCTGCAGAAGTCAGGTaGATGTCAGGCTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSSAEVR*MSGWTS
Trigger: AGACGTCCAGCCTGACATTCACCTGACTTCTGCAGA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCATTCAGGTTGGTTATaGATTCCTGGCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKHSGWL*IPGSSC
Trigger: GCATGAGCTGCCAGGAATTCATAACCAACCTGAATG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGAGGGTGACATGGGCTaGGCTCTGGGAGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQEGDMG*ALGGKS
Trigger: TGACTTTCCTCCCAGAGCTCAGCCCATGTCACCCTC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAGCAAGTCTAGGAAATaGGGCCACTCTGGATTCTGG +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMSKSRK*GHSGFW
Trigger: CCAGAATCCAGAGTGGCCTCATTTCCTAGACTTGCT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGGCCTGTGGTGGTTTaGTCTGTTCCATACCTAGGA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPRPVVV*SVPYLG
Trigger: TCCTAGGTATGGAACAGATCAAACCACCACAGGCCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAGCTCAGCTGAGATCATaGGAGCCCAGGAAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSAQLRS*EPRKQL
Trigger: TAACTGCTTCCTGGGCTCTCATGATCTCAGCTGAGC...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGTTGGCTCACGCCTGTaGTCCCAATGCTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICVGSRL*SQCFGR
Trigger: CCTCCCAAAGCATTGGGATCACAGGCGTGAGCCAAC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAGCCAGTGTGCCGGCTaGGGGGAACAGTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSSQCAG*GEQLVT
Trigger: TGTGACCAACTGTTCCCCTCAGCCGGCACACTGGCT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAGCCAGTGTGCCGGCTaGGGGGAACAGTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFSQCAG*GEQLVT
Trigger: TGTGACCAACTGTTCCCCTCAGCCGGCACACTGGCT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGAGCCCACACATACCGTaGATTCATCACAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKSPHIP*IHHRKQ
Trigger: CTGCTTTCTGTGATGAATTCACGGTATGTGTGGGCT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCAGGGTCTGGTAGATaGTCACATAGCTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPAGSGR*SHSYQG
Trigger: GCCTTGATAGCTATGTGATCATCTACCAGACCCTGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGAGAGGCAAAAAGAAATaGAGAGGGCCGGGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLRGKKK*RGPGRG
Trigger: ACCACGCCCCGGCCCTCTTCATTTCTTTTTGCCTCT...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGAGGTTGCAGTGAATTaGGATCGTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSEVAVN*DRATAL
Trigger: GAGTGCAGTGGCACGATCTCAATTCACTGCAACCTC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCATGTATCCTGGTGTGTaGTCTTTCAAAGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAMYPGV*SFKANG
Trigger: TCCGTTTGCTTTGAAAGATCACACACCAGGATACAT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGACGTGCTCCGGTTCTaGTTTGGGCTCCCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSDVLRF*FGLPGR
Trigger: TCTACCGGGGAGCCCAAAGCAGAACCGGAGCACGTC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGGCCTGCAGGATGCCTaGCCAGAACACTACCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICGLQDA*PEHYLC
Trigger: ACACAGGTAGTGTTCTGGGCAGGCATCCTGCAGGCC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGGCCTGCAGGATGCCTaGCCAGAACACTACCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPGLQDA*PEHYLC
Trigger: ACACAGGTAGTGTTCTGGGCAGGCATCCTGCAGGCC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGTCTGGGCCTGCAGGATaGCTGCCCAGAACACTACCT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPSGPAG*LPRTLP
Trigger: AGGTAGTGTTCTGGGCAGGCATCCTGCAGGCCCAGA...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATTCGTCCACACACGGTaGTGCAGATGGAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQFVHTR*CRWSRT
Trigger: GGTCCTGCTCCATCTGCAGCACCGTGTGTGGACGAA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAAAGGACCTCCTCTCTaGCAGCCCTCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPKGPPL*QPSGLR
Trigger: TCTCAGCCCTGAGGGCTGGCAGAGAGGAGGTCCTTT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGCTGAAGGAAGGGCTTaGTCATCTTGCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLAEGRA*SSCQLA
Trigger: TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTTTTCCGAGCCAGGATaGCCTGCTTGTAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLFSEPG*PACRWA
Trigger: TGCCCACCTACAAGCAGGGCATCCTGGCTCGGAAAA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCGTCTTCTTGCCGTCTaGATCTTGATGCATTTTCCG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKRLLAV*ILMHFP
Trigger: CGGAAAATGCATCAAGATGCAGACGGCAAGAAGACG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGTCTTCCAGCCACGCTTaGCCCATGGCGTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPSSSHA*PMASSC
Trigger: GCAAGAAGACGCCATGGGGCAAGCGTGGCTGGAAGA...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGGCTCATCCACCATCTaGCCCACCAAGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQGSSTI*PTKLSP
Trigger: GGGGGAGAGCTTGGTGGGGCAGATGGTGGATGAGCC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCTCCTTGGCAGTGGGTaGCTGGAAGAGGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLLGSG*LEEVEA
Trigger: CGCCTCTACCTCTTCCAGGCACCCACTGCCAAGGAG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGGAGCCTCATCCTGGTaGAGGGACGGGCTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKGASSW*RDGLEW
Trigger: CCACTCGAGCCCGTCCCTGCACCAGGATGAGGCTCC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCCAAGATCACACCATTaGACTCCAGCCTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMPRSHH*TPAWVT
Trigger: TGTAACCCAGGCTGGAGTGCAATGGTGTGATCTTGG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGTCACATGTCATAACTaGAGCCCACAACCCAGACCC +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSVTCHN*SPQPRP
Trigger: GGGTCTGGGTTGTGGGCTGCAGTTATGACATGTGAC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTTACCCAGGCTGGAGTaGAATGGCGCAACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLLPRLE*NGATSA
Trigger: AGCTGAGGTTGCGCCATTGCACTCCAGCCTGGGTAA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTAATTGCCCTAGGAGGTaGCATTTCAGGCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRNCPRR*HFRQRW
Trigger: CCACCTTTGCCTGAAATGGCACCTCCTAGGGCAATT...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACTCAGATTTGTTATTTaGAGGCCAAGGCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVALRFVI*RPRQSQ
Trigger: TTGGCTCTGCCTTGGCCTGCAAATAACAAATCTGAG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAAACAATCCCAGTTCCTaGCCACAGGGAGTTTATGTT +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVANNPSS*PQGVYV
Trigger: AACATAAACTCCCTGTGGGCAGGAACTGGGATTGTT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCAAGAATGGATGGCTTaGCCTGGGCTCCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICQEWMA*PGLPKS
Trigger: GCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCAAAGGACCCAAGAATaGATGGCTTGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLQRTQE*MAWPGL
Trigger: GAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGGGCTCCCCGGTAGATaGCTGTTCACTGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFGLPGR*LFTGDP
Trigger: AGGGTCACCAGTGAACAGCCATCTACCGGGGAGCCC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGGGCTCCCCGGTAGATaGCTGTTCACTGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSGLPGR*LFTGDP
Trigger: AGGGTCACCAGTGAACAGCCATCTACCGGGGAGCCC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGTCTTCATTCTCAGGTaGGCTGGAGTGCAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKVFILR*AGVQAR
Trigger: ACGGGCCTGCACTCCAGCCCACCTGAGAATGAAGAC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGTCTTCATTCTCAGGTaGGCTGGAGTGCAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICVFILR*AGVQAR
Trigger: ACGGGCCTGCACTCCAGCCCACCTGAGAATGAAGAC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACTGTGGGGAAGAGTCTaGGGTTCCCTCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKLWGRV*GSLSQP
Trigger: TGGCTGAGAGAGGGAACCCCAGACTCTTCCCCACAG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGCCGTCCCCCAAATCTaGCTCACTTTCCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICAVPQI*LTFQLP
Trigger: TGGGAGCTGGAAAGTGAGCCAGATTTGGGGGACGGC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGCCGTCCCCCAAATCTaGCTCACTTTCCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKAVPQI*LTFQLP
Trigger: TGGGAGCTGGAAAGTGAGCCAGATTTGGGGGACGGC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGAGTTAAGAGTCACCTaGGGCCAAAAAGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPELRVT*GQKGPP
Trigger: AGGAGGTCCTTTTTGGCCCCAGGTGACTCTTAACTC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTTTCTTCAAGGAACTTaGCTGTTCCCCATCCGTCTC +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKFLQGT*LFPIRL
Trigger: GAGACGGATGGGGAACAGCCAAGTTCCTTGAAGAAA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTGCCCTGCTTGTAGGTaGGCACTGTGGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICCPACR*ALWDPE
Trigger: CTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTCTTGGTGTAATGCGTaGCGGGGGTGGCCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFSWCNA*RGWPAS
Trigger: ACTCGCTGGCCACCCCCGCCACGCATTACACCAAGA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATCCAGGCAGTTCTCGTaGGATCGATGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKSRQFS*DRCCSS
Trigger: GGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAGGGACGGGCTCGAGTaGGACTTCTTCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSRDGLE*DFFRLS
Trigger: GCTCAGCCTGAAGAAGTCCCACTCGAGCCCGTCCCT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGATTGCACATGTCAAGGTGTGTACAGAATCTACTGAGGGGAAGATCCCCGGATGTTGCGCTTCACCTTaGCCGTGGTGGGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: MIAHVKVCTESTEGKIPGCCASP*PWWEPH
Trigger: ATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACA...TCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGGCCACTCTGGATTCTaGGGCCTGGAGGGTGACATG +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFGHSGF*GLEGDM
Trigger: CATGTCACCCTCCAGGCCCCAGAATCCAGAGTGGCC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGAAATGAGGCCACTCTaGATTCTGGGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPEMRPL*ILGPGG
Trigger: CCCTCCAGGCCCCAGAATCCAGAGTGGCCTCATTTC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGAAATGAGGCCACTCTaGATTCTGGGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICEMRPL*ILGPGG
Trigger: CCCTCCAGGCCCCAGAATCCAGAGTGGCCTCATTTC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTGGGTCACAGGAGGCTaGTTAGGAATTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKWVTGG*LGISQE
Trigger: CTCTTGAGAAATTCCTAACCAGCCTCCTGTGACCCA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGCTGGTTACAAGCATaGGAAGGGAGGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKSWLQA*EGRRVA
Trigger: GGCCACCCTCCTCCCTTCCCATGCTTGTAACCAGCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAGCTGGTTACAAGCATaGGAAGGGAGGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPSWLQA*EGRRVA
Trigger: GGCCACCCTCCTCCCTTCCCATGCTTGTAACCAGCT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCCTTCCAGCGTTACCTaGAGCAACCCTGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSPSSVT*SNPVGS
Trigger: GCTCCCCACAGGGTTGCTCCAGGTAACGCTGGAAGG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGTGATCCCAATGCTTTaGGAGGCCGAGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQVIPML*EAEAAG
Trigger: TCCAGCTGCCTCGGCCTCCCAAAGCATTGGGATCAC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCAGGCAAAGGTGGGGTaGACGCCGATTTGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLQAKVG*TPICKV
Trigger: CACCTTACAAATCGGCGTCCACCCCACCTTTGCCTG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATTCCTGGGGCCATCTTaGAAGCATGAGGGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSFLGPS*KHEGCS
Trigger: GGAACAACCCTCATGCTTCCAAGATGGCCCCAGGAA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATCACCCATCATCCACTaGGCAAAAGCTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQSPIIH*AKAAQE
Trigger: CTCCTGGGCAGCTTTTGCTCAGTGGATGATGGGTGA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTATTTCAGCCCAGCCTTaGGCCCTTCCGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICISAQP*ALPSSP
Trigger: TGGAGAAGACGGAAGGGCTCAAGGCTGGGCTGAAAT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAATTTCAGCCCAGCCTTaGGCCCTTCCGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKISAQP*ALPSSP
Trigger: TGGAGAAGACGGAAGGGCTCAAGGCTGGGCTGAAAT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGGAAGAAGGACAGGTACTCCTCAGCCACAGCCCTGCTAAAGTCATTGTTCTTTTGCCGTCTGCATCTTaGTGCATTTTCCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LEEGQVLLSHSPAKVIVLLPSAS*CIFRAR
Trigger: CCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAA...AAGAACAATGACTTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTACTTGCACACTTGGCTaGACAGAGACAATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSTCTLG*TETMVA
Trigger: AGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGAGCAAGTAGGTGAATaGATGATTCTGAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKEQVGE*MILRSP
Trigger: AGGAGACCTCAGAATCATTCATTCACCTACTTGCTC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAAGGCCTGTGGTGGTTTaGTCTGTTCCATACCTAGGA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSRPVVV*SVPYLG
Trigger: TCCTAGGTATGGAACAGATCAAACCACCACAGGCCT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGGCCTCAGGCCACCCTaGCGGCCCTGTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEGLRPP*RPCFPL
Trigger: CAGAGGGAAACAGGGCCGTCAGGGTGGCCTGAGGCC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGAACCTTGAGGATCTGTaGGCATGCCTGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLNLEDL*ACLLSS
Trigger: TGAGCTGAGCAGGCATGCTCACAGATCCTCAAGGTT...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGGGCATCAGAAAAGCTaGGGGGCAGAGGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFGHQKS*GAEVLA
Trigger: TGCCAACACCTCTGCCCCTCAGCTTTTCTGATGCCC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGCAGGGTCTGGTAGATaGTCACATAGCTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSAGSGR*SHSYQG
Trigger: GCCTTGATAGCTATGTGATCATCTACCAGACCCTGC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGCAGGATGGCATGCATaGGGGCAGAGCCTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLAGWHA*GQSLSQ
Trigger: CTGGCTTAGGCTCTGCCCTCATGCATGCCATCCTGC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCAAGAAAATGGATCTTaGGAGTTCCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMQENGS*EFLGPS
Trigger: AGATGGCCCCAGGAACTCTCAAGATCCATTTTCTTG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTTCAAAGCAAACGGATaGCCTCAAGCCATCGCAGAA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRFKANG*PQAIAE
Trigger: TTCTGCGATGGCTTGAGGTCATCCGTTTGCTTTGAA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGGTGATGCTGTGTTCTaGCTGTGCTCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSGDAVF*LCSLWA
Trigger: TGCCCAGAGGGAGCACAGGCAGAACACAGCATCACC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCTACCTGTGTGGACGTaGTCCGGTTCTGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLPVWT*SGSALG
Trigger: GCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACAGATTCTCATGTTCTaGAGAAGTCAGGTGAATGTC +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAQILMF*RSQVNV
Trigger: GACATTCACCTGACTTCTGCAGAACATGAGAATCTG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGTTAAGCAGCATGATTaGACATGTCAAGGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAVKQHD*TCQGVY
Trigger: GTACACACCTTGACATGTGCAATCATGCTGCTTAAC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGCTGAAGGAAGGGCTTaGTCATCTTGCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQAEGRA*SSCQLA
Trigger: TGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCCCATGGCGTCTTCTTaGCGTCTGCATCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLPMASS*RLHLDA
Trigger: TGCATCAAGATGCAGACGGCAAGAAGACGCCATGGG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCCCAGCCCTCACTCATaGCATCAGCTCTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPPSPHS*HQLCSV
Trigger: AACAGAGCAGAGCTGATGGCATGAGTGAGGGCTGGG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAGAAAGATGCAAGCCTaGCTCCAAGTGGTCACATGT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMRKMQA*LQVVTC
Trigger: ACATGTGACCACTTGGAGGCAGGCTTGCATCTTTCT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGAAAGATGCAAGCCTaGCTCCAAGTGGTCACATGT +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPRKMQA*LQVVTC
Trigger: ACATGTGACCACTTGGAGGCAGGCTTGCATCTTTCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTCAGAAGCTAGAAAGATaGAAGCCTGCCTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSQKLER*KPASKW
Trigger: CCACTTGGAGGCAGGCTTGCATCTTTCTAGCTTCTG...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAACTGCAGCCATCAATTaGCCTAGGAGGTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSTAAIN*PRRCHF
Trigger: GAAATGGCACCTCCTAGGGCAATTGATGGCTGCAGT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACCAAGCAGGATGGCATaGATGAGGGCAGAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQPSRMA*MRAEPK
Trigger: CTTAGGCTCTGCCCTCATGCATGCCATCCTGCTTGG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTACAGGGAGTTTATGTTaGTCTGGAAGCAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPTGSLC*SGSREA
Trigger: TGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACCGGGAGGCAGAGGTTaGAGTGAATTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQPGGRG*SELRSC
Trigger: GCACGATCTCAATTCACTGCAACCTCTGCCTCCCGG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCTCTGGGCTGTGTCCTaGAGGAAGATCCAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPLWAVS*RKIQGG
Trigger: ACCACCTTGGATCTTCCTGCAGGACACAGCCCAGAG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCCCAAGAGCACTTCCTaGCTCACAGTCGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLPKSTS*LTVGLP
Trigger: GGGCAAGCCGACTGTGAGCCAGGAAGTGCTCTTGGG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245796.11
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCACGGTCTCACTGTGTaGACTAGGGGGAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLHGLTV*TRGSTG
Trigger: GCCAGTGCTCCCCCTAGTCCACACAGTGAGACCGTG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCTCGAAAGGCTCCGGTaGATCCTCATGGCTGCACGT +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSLERLR*ILMAAR
Trigger: ACGTGCAGCCATGAGGATCCACCGGAGCCTTTCGAG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCTGTGGGGAAGAGTCTaGGGTTCCCTCTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLWGRV*GSLSQP
Trigger: TGGCTGAGAGAGGGAACCCCAGACTCTTCCCCACAG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTATGAATTCCTGGCAGCTCATGCTCTTCCCAATGTTCTGTCCATGCAGGTCCTCTGCTCTCAGATTCTaGGCTGCTAGGCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VMNSWQLMLFPMFCPCRSSALRF*AARLWR
Trigger: TCTCCAGAGCCTAGCAGCCCAGAATCTGAGAGCAGA...GGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAATGGTGGAAGCGTCTaGAGAACTGGTAGAGGATTC +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPNGGSV*RTGRGF
Trigger: GAATCCTCTACCAGTTCTCCAGACGCTTCCACCATT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCCCGGATTGCAATGGTaGAAGCGTCTGGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICPGLQW*KRLENW
Trigger: CCAGTTCTCCAGACGCTTCCACCATTGCAATCCGGG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTGGGCAAAATGCTCATCTCCTTGGCAGTaGGTGCCTGGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PSPRVKTVKHLVSTWAKCSSPWQ*VPGRGR
Trigger: TCTACCTCTTCCAGGCACCCACTGCCAAGGAGATGA...GCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATGCAAGCCCCAGAGCTaGTTACAAGCATGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQCKPQS*LQAWEG
Trigger: CCCTTCCCATGCTTGTAACCAGCTCTGGGGCTTGCA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTTATTGTGCACCCATTaGGTGCATGGCCTAGCCCTA +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSLLCTH*VHGLAL
Trigger: TAGGGCTAGGCCATGCACCCAATGGGTGCACAATAA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCAGCATCCCTGGGTGTaGGCTGGGAATGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLQHPWV*AGNVSF
Trigger: AAAAGACACATTCCCAGCCCACACCCAGGGATGCTG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGACATAGGCCTGTGGTaGTTTGATCTGTTCCATACC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRDIGLW*FDLFHT
Trigger: GGTATGGAACAGATCAAACCACCACAGGCCTATGTC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGCAGGCCCAGGACCCTaGAAGCTGAGCTCCCCTATA +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQAGPGP*KLSSPI
Trigger: TATAGGGGAGCTCAGCTTCCAGGGTCCTGGGCCTGC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGTCAGGAGTAACAACCTaGGTCACAGCAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPSGVTT*VTAGPG
Trigger: TCCTGGGCCTGCTGTGACCCAGGTTGTTACTCCTGA...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAATCTACCCTGGTGCCTaGCAAGCAACAAACAAATAT +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAIYPGA*QATNKY
Trigger: ATATTTGTTTGTTGCTTGCCAGGCACCAGGGTAGAT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCATTTTTAGTAAAGACTaGGTTTCACCACGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAIFSKD*VSPRWP
Trigger: TGGCCAACGTGGTGAAACCCAGTCTTTACTAAAAAT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGCCAGGGTCAGCTATaGAAAGCAAGAGAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPSQGQL*KARESN
Trigger: GTTAGACTCTCTTGCTTTCCATAGCTGACCCTGGCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGGGCTGGGAACAGTTaGCAAAGCCCACACATACCG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICRAGNS*QSPHIP
Trigger: CGGTATGTGTGGGCTTTGCCAACTGTTCCCAGCCCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACATTTCAGGCAAAGGTaGGGTGGACGCCGATTTGTA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSHFRQR*GGRRFV
Trigger: TACAAATCGGCGTCCACCCCACCTTTGCCTGAAATG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGAGGAGGCCAGGAGTaGTGGGCAAGACTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLGGGQE*WARLSA
Trigger: TGCTGACAGTCTTGCCCACCACTCCTGGCCTCCTCC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCAGGCTCAGTTTCTCTaGGCTGTGTCCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICQAQFL*AVSCRK
Trigger: CTTCCTGCAGGACACAGCCCAGAGAAACTGAGCCTG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTTGTGGTCACATACATaGCTCTCATTCACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKLWSHT*LSFTRG
Trigger: CCCTCTTGTGAATGAGAGCCATGTATGTGACCACAA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp CAGACACTACACACATGCACAGACACACATACACACTaGGAGCAAAGAGGGATGAAGCCTGCCACACTGCAG +
Preference number: 4 (lower is better)
Translates to: QTLHTCTDTHTH*EQRGMKPATLQ
Trigger: CTGCAGTGTGGCAGGCTTCATCCCTCTTTGCTCCAAGTGTGTATGTGTGTCTGTGCATGTGTGTAGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACTCCCAAGTACAGGTTaGGAATTTCCATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKLPSTG*EFPWAG
Trigger: CCCAGCCCATGGAAATTCTCAACCTGTACTTGGGAG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCCTGAGCTGTGGTGTTaGAGCTGCGGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEPELWC*SCGLPS
Trigger: GGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTGGGCAAAATGCGTGTACAGAATCTACTaGGGGGAAGATCCCCGGATT +
Preference number: 4 (lower is better)
Translates to: PSPRVKTVKHLVSTWAKCVYRIY*GEDPRI
Trigger: AATCCGGGGATCTTCCCCTCAGTAGATTCTGTACAC...GCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGTAGGTTCTGCGCTCTaGGATGTTGCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPVGSAL*DVALHL
Trigger: AAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTAC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTCATGGTGGACTCATTaGAATAAGTCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSSWWTH*NKSPPG
Trigger: CCCTGGAGGAGACTTATTTCAATGAGTCCACCATGA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAGGATGCATGTTCAGTaGGGTCAAATAACCTACTCC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMRMHVQ*GQITYS
Trigger: GGAGTAGGTTATTTGACCTCACTGAACATGCATCCT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAACCATCATCTGGCTCTaGAGATTCCACGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQTIIWL*RFHVLR
Trigger: CCTGAGCACGTGGAATCTTCAGAGCCAGATGATGGT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATGGGTTTTACGAAGTTaGAGGTCCTGGTTCGGTGAT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSWVLRS*RSWFGD
Trigger: ATCACCGAACCAGGACCTTCAACTTCGTAAAACCCA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAACCTTGAGGATCTGTaGGCATGCCTGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQNLEDL*ACLLSS
Trigger: TGAGCTGAGCAGGCATGCTCACAGATCCTCAAGGTT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGAAGGTCGCTGAGAGGTaGTGGCGGAAGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLKVAER*WRKKAE
Trigger: CTCAGCCTTCTTCCGCCATCACCTCTCAGCGACCTT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATTCAAAGCAAACGGATaGCCTCAAGCCATCGCAGAA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSFKANG*PQAIAE
Trigger: TTCTGCGATGGCTTGAGGTCATCCGTTTGCTTTGAA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGATGTATCCTGGTGTGTaGTCTTTCAAAGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKMYPGV*SFKANG
Trigger: TCCGTTTGCTTTGAAAGATCACACACCAGGATACAT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGTGCCCCGGAGCATCTaGTTTCACGGTCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLVPRSI*FHGLTV
Trigger: CACAGTGAGACCGTGAAAGCAGATGCTCCGGGGCAC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAATGGAGGGGTACAATaGCCACTGATAGCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFNGGVQ*PLIAAP
Trigger: CGGCGCTGCTATCAGTGGGCATTGTACCCCTCCATT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAGGTTGCACAGGATGTaGAGCAGGGCCAAGATCAGA +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQRLHRM*SRAKIR
Trigger: TCTGATCTTGGCCCTGCTGCACATCCTGTGCAACCT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGAGAGAGGCCCAAGGTTaGACAGGATGTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLREAQG*TGCAAG
Trigger: CCCTGCTGCACATCCTGTGCAACCTTGGGCCTCTCT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGACGTCTCCAGTCTCTaGAGGCCTGGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQDVSSL*RPGCSF
Trigger: GAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTTTTCCGAGCCAGGATaGCCTGCTTGTAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFFSEPG*PACRWA
Trigger: TGCCCACCTACAAGCAGGGCATCCTGGCTCGGAAAA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATCTTCCGGTAGGTTCTaGGCTCTGAGATGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQSSGRF*ALRCCA
Trigger: AGCGCAACATCTCAGAGCGCAGAACCTACCGGAAGA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAGCAGGGAAAGGAGGTaGCTCATCCGTCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFSRERR*LIRHGG
Trigger: TCCACCATGACGGATGAGGCACCTCCTTTCCCTGCT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCATGGGGACTGGAGCCTaGTCAGCTTTCACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFMGTGA*SAFTFQ
Trigger: CTGGAAGGTGAAAGCTGAGCAGGCTCCAGTCCCCAT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTACAGGGAGTTTATGTTaGTCTGGAAGCAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSTGSLC*SGSREA
Trigger: TGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGTGCCACTGCACTCCTaGCTGAAAAAGAATATGCAA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRVPLHS*LKKNMQ
Trigger: TTGCATATTCTTTTTCAGGCAGGAGTGCAGTGGCAC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGACTGTCAGCAAGCCTaGACAGGGAAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLDCQQA*TGKASL
Trigger: AAGAGATGCTTTCCCTGTGCAGGCTTGCTGACAGTC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGTCACCCTCAGCCTCTaGTCAGTGAGAGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKVTLSL*SVRALK
Trigger: TTTCAGTGCTCTCACTGAGCAGAGGCTGAGGGTGAC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGATGGATGGCTTGGCCTaGGCTCCCCAAGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQMDGLA*APQEHF
Trigger: GAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCAT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGGACCCAAGAATGGATaGCTTGGCCTGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKGPKNG*LGLGSP
Trigger: TGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAGAATTTCCATGGGCTaGGGGTGGTCAGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSRISMG*GWSGSL
Trigger: CAGACTCCCTGACCACCCCCAGCCCATGGAAATTCT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGAACACTACCTGTGTaGACGTGCTCCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICRTLPV*TCSGSA
Trigger: AGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGAACACTACCTGTGTaGACGTGCTCCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKRTLPV*TCSGSA
Trigger: AGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATCTCTCAGCCATGCCTaGCCCTCTCCCTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSLSHA*PSPSGS
Trigger: TGAGCCTGAGGGAGAGGGCCAGGCATGGCTGAGAGA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCTGAGGCCCAGCAGATaGAGTGTGGTTTATAGATGG +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLLRPSR*SVVYRW
Trigger: CCATCTATAAACCACACTCCATCTGCTGGGCCTCAG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTTGGTTATGAATTCCTaGCAGCTCATGCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPLVMNS*QLMLFP
Trigger: TGGGAAGAGCATGAGCTGCCAGGAATTCATAACCAA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTGGTTATGAATTCCTaGCAGCTCATGCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GCSPSVSKSEDCEASSVHLVMNS*QLMLFP
Trigger: TGGGAAGAGCATGAGCTGCCAGGAATTCATAACCAA...GTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAATCTCAGGTCTACCCTaGAGCAGGGAACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKISGLP*SREQCL
Trigger: GAGACACTGTTCCCTGCTCCAGGGTAGACCTGAGAT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTACATGGGCTGAGCTCTaGGAGGAAAGTCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICTWAEL*EESQVL
Trigger: GAGGACTTGACTTTCCTCCCAGAGCTCAGCCCATGT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGACATGGGCTGAGCTCTaGGAGGAAAGTCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPTWAEL*EESQVL
Trigger: GAGGACTTGACTTTCCTCCCAGAGCTCAGCCCATGT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTGTAAGCATCAGTCTTaGGCCAAAAGTCATGTCCAC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRCKHQS*AKSHVH
Trigger: GTGGACATGACTTTTGGCCCAAGACTGATGCTTACA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAAAGCCTGCCTCCAAGTaGTCACATGTCATAACTGCA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSKPASK*SHVITA
Trigger: TGCAGTTATGACATGTGACCACTTGGAGGCAGGCTT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAATTTTTAGTAAAGACTaGGTTTCACCACGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAIFSKD*VSPRWP
Trigger: TGGCCAACGTGGTGAAACCCAGTCTTTACTAAAAAT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTCTGACCCTACCCATTaGCCTTACTTTTTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRSDPTH*PYFFKA
Trigger: TGCCTTGAAAAAGTAAGGCCAATGGGTAGGGTCAGA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGCTGAGGGGAACAGTTaGTCACAGGCTTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSAEGNS*SQACGE
Trigger: CTCTCCACAAGCCTGTGACCAACTGTTCCCCTCAGC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTTCCTGGGGCCATCTTaGAAGCATGAGGGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICFLGPS*KHEGCS
Trigger: GGAACAACCCTCATGCTTCCAAGATGGCCCCAGGAA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGATCTTGAGAGTTCCTaGGGCCATCTTGGAAGCATG +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLDLESS*GHLGSM
Trigger: CATGCTTCCAAGATGGCCCCAGGAACTCTCAAGATC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCATCCTCTCCAGAAGTaGACTCTGATCTCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMHPLQK*TLISLN
Trigger: GTTTAAGGAGATCAGAGTCCACTTCTGGAGAGGATG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATCAGAGCAGCGAATGTaGACATGTAGAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQSEQRM*TCRGRR
Trigger: CCTCCTCCCTCTACATGTCCACATTCGCTGCTCTGA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCAGGAAGATCCAAGGTaGTCACCCTCAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFQEDPR*SPSASA
Trigger: AGCAGAGGCTGAGGGTGACCACCTTGGATCTTCCTG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATTCCTCACCTTGTTCTaGGGAGGATTTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSFLTLF*GGFETA
Trigger: AGCAGTCTCAAATCCTCCCCAGAACAAGGTGAGGAA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp GACCTCCCTTCCTCACACACTGACACACCTCCCTCTTaGTTGACCTGTTATTTATTGTGCACCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: DLPSSHTDTPPS*LTCYLLCTHWV
Trigger: CACCCAATGGGTGCACAATAAATAACAGGTCAACAAAGAGGGAGGTGTGTCAGTGTGTGAGGAAGGGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp AAGACTCAGACCCTCCTAAGGAAAAAGGTGCGGGTCTaGGTGATCTTTTTATCTACCCTGGTGCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: KTQTLLRKKVRV*VIFLSTLVPGK
Trigger: CTTGCCAGGCACCAGGGTAGATAAAAAGATCACCAAGACCCGCACCTTTTTCCTTAGGAGGGTCTGAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTGGGCAAAATGCCATTCAGGTTGGTTATaGATTCCTGGCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: PSPRVKTVKHLVSTWAKCHSGWL*IPGSSC
Trigger: GCATGAGCTGCCAGGAATTCATAACCAACCTGAATG...GCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTTGCCGTCTGCATCTTaGTGCATTTTCCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSLPSAS*CIFRAR
Trigger: CCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGTAGGTTCTGCGCTCTaGGATGTTGCGCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFVGSAL*DVALHL
Trigger: AAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTAC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGCACCTCCCTCTTTGTTaGCCTGTTATTTATTGTGCA +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMHLPLC*PVIYCA
Trigger: TGCACAATAAATAACAGGTCAACAAAGAGGGAGGTG...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCTGTCCTCCAAGCCCTaGGCTTGGCACTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLLSSKP*AWHSSL
Trigger: AAGAGAAGAGTGCCAAGCTCAGGGCTTGGAGGACAG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCCGATTTGTAAGGTGTaGATTAGAGCCAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRPICKV*IRARYE
Trigger: TTCATACCTGGCTCTAATTCACACCTTACAAATCGG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTGCCAGGCATTGTTCTaGGATGTTTACGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRCQALF*DVYVHN
Trigger: ATTATGCACGTAAACATCTCAGAACAATGCCTGGCA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGAGAGGCAAAAAGAAATaGAGAGGGCCGGGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLRGKKK*RGPGRG
Trigger: ACCACGCCCCGGCCCTCTTCATTTCTTTTTGCCTCT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGGAAGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTTCC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCTCTTAGTGGTCAACTaGAAGGGTGTTGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLLLVVN*KGVVVT
Trigger: TGTGACCACAACACCCTTTCAGTTGACCACTAAGAG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAAAGCTGCCCAGGAGTaGCCCGGAGCATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKKAAQE*PGASAF
Trigger: GAAAGCAGATGCTCCGGGGCACTCCTGGGCAGCTTT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGTGGATCCTCATGGCTaGACGTTTCCCTTGGGCACT +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLVDPHG*TFPLGT
Trigger: AGTGCCCAAGGGAAACGTGCAGCCATGAGGATCCAC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTCAGTGGCCCGGGTTTaGTCCTGGCAAGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHESVARV*SWQGSS
Trigger: GCTGGAGCCTTGCCAGGAGCAAACCCGGGCCACTGA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCTGTGTTCTGCCTGTaGTCCCTCTGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEAVFCL*SLWAEG
Trigger: CCCCTCTGCCCAGAGGGAGCACAGGCAGAACACAGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTCCACTTGGGCAAAATaGCTGAGCTGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSTWAK*LSCGVE
Trigger: TTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGACGTCTCCAGTCTCTaGAGGCCTGGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKDVSSL*RPGCSF
Trigger: GAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCAGATTCTCATGTTCTaGAGAAGTCAGGTGAATGTC +
Preference number: 4 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRQILMF*RSQVNV
Trigger: GACATTCACCTGACTTCTGCAGAACATGAGAATCTG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGAAGATCCCCGGATTaGAATGGTGGAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLGRSPD*NGGSVW
Trigger: CCAGACGCTTCCACCATTGCAATCCGGGGATCTTCC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGGAAGATCCCCGGATTaGAATGGTGGAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQGRSPD*NGGSVW
Trigger: CCAGACGCTTCCACCATTGCAATCCGGGGATCTTCC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCCAATGTTCTGTCCATaGAGGTCCGTGTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICPMFCP*RSVLSS
Trigger: GCTGCTTAACACGGACCTGCATGGACAGAACATTGG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGGCTCATCCACCATCTaGCCCACCAAGCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEGSSTI*PTKLSP
Trigger: GGGGGAGAGCTTGGTGGGGCAGATGGTGGATGAGCC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAACCTGTTATTTATTGTaGACCCATTGGGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSTCYLL*THWVHG
Trigger: GCCATGCACCCAATGGGTGCACAATAAATAACAGGT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACCAAGATCACACCATTaGACTCCAGCCTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQPRSHH*TPAWVT
Trigger: TGTAACCCAGGCTGGAGTGCAATGGTGTGATCTTGG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGTCACATGTCATAACTaGAGCCCACAACCCAGACCC +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFVTCHN*SPQPRP
Trigger: GGGTCTGGGTTGTGGGCTGCAGTTATGACATGTGAC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCAGAAGCTAGAAAGATaGAAGCCTGCCTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPQKLER*KPASKW
Trigger: CCACTTGGAGGCAGGCTTGCATCTTTCTAGCTTCTG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACACATAATAACTTCCTaGCTTTCAGGGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSHIITS*LSGSTA
Trigger: AGCTGTGCTCCCTGAAAGGCAGGAAGTTATTATGTG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCTGAGGAAGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSLRKEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCTTCCTCAG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAATGGATGGCTTGGCCTaGGCTCCCCAAGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKMDGLA*APQEHF
Trigger: GAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCAT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGGCCGCTGGAGAAACTaGGAATCCATATCTACCCTC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSGRWRN*ESISTL
Trigger: GAGGGTAGATATGGATTCCCAGTTTCTCCAGCGGCC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACAGCACTGTGTCTTCTaGGAGGGGAGGCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKQHCVF*EGRLQS
Trigger: ACTCTGGAGCCTCCCCTCCCAGAAGACACAGTGCTG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAGTGTGGTTTATAGATaGGCACAGGGAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICSVVYR*AQGMEG
Trigger: CCCCTCCATTCCCTGTGCCCATCTATAAACCACACT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGACACGGTGCTGCAGATaGAGCAGGACCAAGCCTATC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQTRCCR*SRTKPI
Trigger: GATAGGCTTGGTCCTGCTCCATCTGCAGCACCGTGT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCTCTGGAGAAGAAGCTaGGCTCCTCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHELWRRS*APPGAG
Trigger: CCCTGCCCCTGGAGGAGCCCAGCTTCTTCTCCAGAG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245796.11
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTTTCTTCAAGGAACTTaGCTGTTCCCCATCCGTCTC +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLFLQGT*LFPIRL
Trigger: GAGACGGATGGGGAACAGCCAAGTTCCTTGAAGAAA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCAGTCTCTGCAGGCCTaGCTGTTCCTTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPQSLQA*LFLHSL
Trigger: TAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACAGTCTCTGCAGGCCTaGCTGTTCCTTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQQSLQA*LFLHSL
Trigger: TAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGTGTAGGTGGGCACTGTaGGATCCTGAGCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLCRWAL*DPEPAE
Trigger: TTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACA...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATGCCCTGCTTGTAGGTaGGCACTGTGGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKCPACR*ALWDPE
Trigger: CTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGAGGAGCTCATCTCCTTaGCAGTGGGTGCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQRSSSP*QWVPGR
Trigger: TCTTCCAGGCACCCACTGCCAAGGAGATGAGCTCCT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTATCTCAGGTCTACCCTaGAGCAGGGAACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSISGLP*SREQCL
Trigger: GAGACACTGTTCCCTGCTCCAGGGTAGACCTGAGAT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGGACTGCCATGGGGGTaGTGGGGAGCACAGCAATAT +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKGLPWG*WGAQQY
Trigger: ATATTGCTGTGCTCCCCACCACCCCCATGGCAGTCC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGAAAGTCTCCCGAGCCTaGCCTAGGCCTCGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEKVSRA*PRPRLV
Trigger: GACCAGGCGAGGCCTAGGCCAGGCTCGGGAGACTTT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCTGAGCTGCCAGAGATaGGGAAGGGGTCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHELSCQR*GRGPGT
Trigger: GGTGCCTGGACCCCTTCCCCATCTCTGGCAGCTCAG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGAGAACAAGCCCAGCTaGGAGGCAGCCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEENKPS*EAARGQ
Trigger: CTGCCCTCTGGCTGCCTCCCAGCTGGGCTTGTTCTC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCACCCATTGGGTGCATaGCCTAGCCCTAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEHPLGA*PSPRPW
Trigger: CCAGGGCCTAGGGCTAGGCCATGCACCCAATGGGTG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTTATTGTGCACCCATTaGGTGCATGGCCTAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICLLCTH*VHGLAL
Trigger: TAGGGCTAGGCCATGCACCCAATGGGTGCACAATAA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAAGAGCAGGAAACCAGTaGGCAAGATTGTCAACTCAT +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSRAGNQ*ARLSTH
Trigger: ATGAGTTGACAATCTTGCCCACTGGTTTCCTGCTCT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTCAGGAGTAACAACCTaGGTCACAGCAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQSGVTT*VTAGPG
Trigger: TCCTGGGCCTGCTGTGACCCAGGTTGTTACTCCTGA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGACCCTGTATGATCTaGCCTCAGGCCACCCTGACG +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKRPCMI*PQATLT
Trigger: CGTCAGGGTGGCCTGAGGCCAGATCATACAGGGTCT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAAAAGCCACTCTCCTTaGCTGCATTGGAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPKSHSP*LHWRPC
Trigger: ACAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTAAAAGCCACTCTCCTTaGCTGCATTGGAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICKSHSP*LHWRPC
Trigger: ACAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAGTAATCCCAGCTACTTaGGAGGCTGGGAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKVIPAT*EAGKGE
Trigger: TTCTCCTTTCCCAGCCTCCCAAGTAGCTGGGATTAC...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGTAATCCCAGCTACTTaGGAGGCTGGGAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICVIPAT*EAGKGE
Trigger: TTCTCCTTTCCCAGCCTCCCAAGTAGCTGGGATTAC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGAGGGCTGGGAACAGTTaGCAAAGCCCACACATACCG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLRAGNS*QSPHIP
Trigger: CGGTATGTGTGGGCTTTGCCAACTGTTCCCAGCCCT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCAGGCAAAGGTGGGGTaGACGCCGATTTGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLQAKVG*TPICKV
Trigger: CACCTTACAAATCGGCGTCCACCCCACCTTTGCCTG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAGGAGCCATGTATTGTaGACAGTTAGAATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMRSHVL*TVRIPG
Trigger: ACCTGGAATTCTAACTGTCCACAATACATGGCTCCT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGTCACAATTCCTAGCTaGGTCCAACTCAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICVTIPS*VQLRVR
Trigger: TCTGACCCTGAGTTGGACCCAGCTAGGAATTGTGAC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTTGTGGTCACATACATaGCTCTCATTCACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSLWSHT*LSFTRG
Trigger: CCCTCTTGTGAATGAGAGCCATGTATGTGACCACAA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp CTCCCTTCCTCACACACTGACACACCTCCCTCTTTGTaGACCTGTTATTTATTGTGCACCCATTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LPSSHTDTPPSL*TCYLLCTHWVH
Trigger: ATGCACCCAATGGGTGCACAATAAATAACAGGTCAACAAAGAGGGAGGTGTGTCAGTGTGTGAGGAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp AAAGTTGCACTGCACATTCACAAAAAGCCACTCTCCTaGGCTGCATTGGAGACCCTGTATGATCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVALHIHKKPLS*AALETLYDLAS
Trigger: TGAGGCCAGATCATACAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTTTGTGAATGTGCAGTGCAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp CCCAAGGCAGGCTGCTACAGGAGACTATTCCTGGATTaGAGTTTGAAACTTCCAGGAAGCAGAGAGTCACTT +
Preference number: 4 (lower is better)
Translates to: PKAGCYRRLFLD*SLKLPGSRESL
Trigger: AAGTGACTCTCTGCTTCCTGGAAGTTTCAAACTCAAATCCAGGAATAGTCTCCTGTAGCAGCCTGCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATGATTGCACATGTCAAGGTGTGTACAGAATCTACTGAGGGGAAGATCCCCGGATCATGGTGGACTCATTaGAATAAGTCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MIAHVKVCTESTEGKIPGSWWTH*NKSPPG
Trigger: CCCTGGAGGAGACTTATTTCAATGAGTCCACCATGA...TCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCAGCAGAGACCCTCTaGGCTGCCAGAGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEAAETL*AARDGE
Trigger: TTCCCCATCTCTGGCAGCTCAGAGGGTCTCTGCTGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCACTTGCACACTTGGCTaGACAGAGACAATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFTCTLG*TETMVA
Trigger: AGCCACCATTGTCTCTGTTCAGCCAAGTGTGCAAGT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGCAGGAGAATCGCTTaGTTCAGTGGAGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLGRRIA*FSGGCS
Trigger: ACTGCAACCTCCACTGAATCAAGCGATTCTCCTGCC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGCTCAGCTGAGATCATaGGAGCCCAGGAAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQAQLRS*EPRKQL
Trigger: TAACTGCTTCCTGGGCTCTCATGATCTCAGCTGAGC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTTGCAGGCCATATTCTaGCCCTACCCATTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLQAIF*PYPLAL
Trigger: TAAGGCCAATGGGTAGGGTCAGAATATGGCCTGCAA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCAGGATGGCATGCATaGGGGCAGAGCCTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEAGWHA*GQSLSQ
Trigger: CTGGCTTAGGCTCTGCCCTCATGCATGCCATCCTGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACAAGAAAATGGATCTTaGGAGTTCCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQQENGS*EFLGPS
Trigger: AGATGGCCCCAGGAACTCTCAAGATCCATTTTCTTG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACACTGCACTCCTGCCTaGAAAAGAATATGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSHCTPA*KRICKK
Trigger: TTTCTTGCATATTCTTTTTCAGGCAGGAGTGCAGTG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCTAGTTTGCAGGAGATaGCACCGAGTGTGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSLVCRR*HRVWSY
Trigger: GTAAGACCACACTCGGTGTCATCTCCTGCAAACTAG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTAAATCCACACTCCCTTaGGCAAAGAAACGATCTGTA +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSKSTLP*AKKRSV
Trigger: TACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCTCTTAGTGGTCAACTaGAAGGGTGTTGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPLLVVN*KGVVVT
Trigger: TGTGACCACAACACCCTTTCAGTTGACCACTAAGAG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCCAATGTTCTGTCCATaGAGGTCCGTGTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSPMFCP*RSVLSS
Trigger: GCTGCTTAACACGGACCTGCATGGACAGAACATTGG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTATTCCTGGCAGCTCATaGTCTTCCCAATGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICIPGSS*SSQCSV
Trigger: GACAGAACATTGGGAAGAGCATGAGCTGCCAGGAAT...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGATTGCACATGTCAAGGTGTGTACAGAATCTACTGAGGGGAAGATCCCCGGAATTCCTGGCAGCTCATaGTCTTCCCAATGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: MIAHVKVCTESTEGKIPGIPGSS*SSQCSV
Trigger: GACAGAACATTGGGAAGAGCATGAGCTGCCAGGAAT...TCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGAGGGCTTGCTCATCTTaGCAGCTGGCAGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHERACSS*QLAGTA
Trigger: AGCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATCATGCCATCAGCTCTaGTCTGTTGATGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQSCHQL*SVDEQL
Trigger: CAACTGCTCATCAACAGAGCAGAGCTGATGGCATGA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGGTTCCAGGGTTCCCTaGAAAGCTCTGGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEGSRVP*KALEAP
Trigger: TGGGGCCTCCAGAGCTTTGCAGGGAACCCTGGAACC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGAGAACCTCCTTCTCTaGTCTGTTGGAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPENLLL*SVGTKA
Trigger: AGCCTTTGTTCCAACAGAGCAGAGAAGGAGGTTCTC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCTTACTTTGTGGAGGTaGAAGCCCCAGAGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSLTLWR*KPQSWL
Trigger: TAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGACCTGTTATTTATTGTaGACCCATTGGGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLTCYLL*THWVHG
Trigger: GCCATGCACCCAATGGGTGCACAATAAATAACAGGT...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGGAGGAAAAAGGACCTaGTACGGCCAGGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFGGKRT*YGQVFT
Trigger: TGTGAAAACCTGGCCGTAGCAGGTCCTTTTTCCTCC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAATTGCCCTAGGAGGTaGCATTTCAGGCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSNCPRR*HFRQRW
Trigger: CCACCTTTGCCTGAAATGGCACCTCCTAGGGCAATT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCAAGGCAGAGCCAAGTaGAAAGCTACCCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLQGRAK*KATQHP
Trigger: TGGATGCTGGGTAGCTTTGCACTTGGCTCTGCCTTG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAGTGTGGTTTATAGATaGGCACAGGGAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSSVVYR*AQGMEG
Trigger: CCCCTCCATTCCCTGTGCCCATCTATAAACCACACT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCTGAGGCCCAGCAGATaGAGTGTGGTTTATAGATGG +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLRPSR*SVVYRW
Trigger: CCATCTATAAACCACACTCCATCTGCTGGGCCTCAG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCAGGGAAGAGATTCCTaGGGGTGTCCACCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEQGRDS*GCPPSL
Trigger: GAGGGAGGGTGGACACCCCCAGGAATCTCTTCCCTG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245796.11
CDS-3UTR CCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACATCTAGTGTCCACTTaGGCAAAATGCCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQHLVST*AKCLSC
Trigger: ACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTTGGTTATGAATTCCTaGCAGCTCATGCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLLVMNS*QLMLFP
Trigger: TGGGAAGAGCATGAGCTGCCAGGAATTCATAACCAA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATGTAGGTGGGCACTGTaGGATCCTGAGCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKCRWAL*DPEPAE
Trigger: TTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACCTCGCAGTAAGGTGTaGAACATCTTCCAGCCACGC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKPRSKV*NIFQPR
Trigger: GCGTGGCTGGAAGATGTTCCACACCTTACTGCGAGG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTCATCTCCTTGGCAGTaGGTGCCTGGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQSSPWQ*VPGRGR
Trigger: TCTACCTCTTCCAGGCACCCACTGCCAAGGAGATGA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGAGGGACGGGCTCGAGTaGGACTTCTTCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHERDGLE*DFFRLS
Trigger: GCTCAGCCTGAAGAAGTCCCACTCGAGCCCGTCCCT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCCTGGAGGGTGACATaGGCTGAGCTCTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEAWRVT*AELWEE
Trigger: TTCCTCCCAGAGCTCAGCCCATGTCACCCTCCAGGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGCCTACTTGCACACTTaGCTGAACAGAGACAATGGT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPAYLHT*LNRDNG
Trigger: ACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTCCCTGGGTGTGGGCTaGGAATGTGTCTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQSLGVG*ECVFSA
Trigger: TGCTGAAAAGACACATTCCCAGCCCACACCCAGGGA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATCTTTTTATCTACCCTaGTGCCTGGCAAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSSFYLP*CLASNK
Trigger: TTTGTTGCTTGCCAGGCACCAGGGTAGATAAAAAGA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTCCCACTCAAGGGCCTaGCCACTGGGGCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHESHSRA*PLGQDQ
Trigger: CTGATCTTGCCCCAGTGGCCAGGCCCTTGAGTGGGA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCAATTTCTCCACAGCTaGTCCCTATGTTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLQFLHS*SLCFGG
Trigger: ACCACCAAAACATAGGGACCAGCTGTGGAGAAATTG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGGAGGAGGCCAGGAGTaGTGGGCAAGACTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEGGGQE*WARLSA
Trigger: TGCTGACAGTCTTGCCCACCACTCCTGGCCTCCTCC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCAAATGTCCTCAAAACATaGCAGCAAATTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSNVLKT*QQIQAQ
Trigger: CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATT...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATTCCTCACCTTGTTCTaGGGAGGATTTGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKFLTLF*GGFETA
Trigger: AGCAGTCTCAAATCCTCCCCAGAACAAGGTGAGGAA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATCTGCAGAAGTCAGGTaGATGTCAGGCTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSAEVR*MSGWTS
Trigger: AGACGTCCAGCCTGACATTCACCTGACTTCTGCAGA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTGCTGGCTTCACAGCTaGTTGCGGTTCCGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHECWLHS*LRFRLG
Trigger: CCCTAAGCGGAACCGCAATCAGCTGTGAAGCCAGCA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGAGCAAGTAGGTGAATaGATGATTCTGAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPEQVGE*MILRSP
Trigger: AGGAGACCTCAGAATCATTCATTCACCTACTTGCTC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTCCACTTCAATCAAATaGGGCAATTGGACTCTACTG +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSTSIK*GNWTLL
Trigger: CAGTAGAGTCCAATTGCCTCATTTGATTGAAGTGGA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTGGGTTTTACGAAGTTaGAGGTCCTGGTTCGGTGAT +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSWVLRS*RSWFGD
Trigger: ATCACCGAACCAGGACCTTCAACTTCGTAAAACCCA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGTCCCCATAGACTTCTaGGATGTCTTTCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPVPIDF*DVFLSL
Trigger: GAGAGAAAGAAAGACATCTCAGAAGTCTATGGGGAC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGAGGTTGCAGTGAATTaGGATCGTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKEVAVN*DRATAL
Trigger: GAGTGCAGTGGCACGATCTCAATTCACTGCAACCTC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTTCCAGAAACTATCTTaGAAGCCCAGCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFFQKLS*KPSSQP
Trigger: TGGCTGACTGCTGGGCTTTCAAGATAGTTTCTGGAA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCATTCAGGAAGATATATTaGGGAGCCATGTATTGTGGA +
Preference number: 4 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSFRKIY*GAMYCG
Trigger: TCCACAATACATGGCTCCTCAATATATCTTCCTGAA...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGAAAGCTGCCCAGGAGTaGCCCGGAGCATCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEKAAQE*PGASAF
Trigger: GAAAGCAGATGCTCCGGGGCACTCCTGGGCAGCTTT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGTCCACACACGGTGCTaGAGATGGAGCAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEVHTRC*RWSRTK
Trigger: CTTGGTCCTGCTCCATCTGCAGCACCGTGTGTGGAC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGAGAGAGGCCCAAGGTTaGACAGGATGTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEREAQG*TGCAAG
Trigger: CCCTGCTGCACATCCTGTGCAACCTTGGGCCTCTCT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTCCACTTGGGCAAAATaGCTGAGCTGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSSTWAK*LSCGVE
Trigger: TTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GAACTTGGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTCAGATTCTCATGTTCTaGAGAAGTCAGGTGAATGTC +
Preference number: 4 (lower is better)
Translates to: ELGCSPSVSKSEDCEASSQILMF*RSQVNV
Trigger: GACATTCACCTGACTTCTGCAGAACATGAGAATCTG...ACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCCAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTATTCCTGGCAGCTCATaGTCTTCCCAATGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSIPGSS*SSQCSV
Trigger: GACAGAACATTGGGAAGAGCATGAGCTGCCAGGAAT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTGCGCTCTGAGATGTTaGGCTTCACCTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHECALRC*ASPWPW
Trigger: CCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGAGGAAAAAGGACCTaGTACGGCCAGGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLGGKRT*YGQVFT
Trigger: TGTGAAAACCTGGCCGTAGCAGGTCCTTTTTCCTCC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGACTGCAGCCATCAATTaGCCTAGGAGGTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLTAAIN*PRRCHF
Trigger: GAAATGGCACCTCCTAGGGCAATTGATGGCTGCAGT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGGAGGAAAGGGCATCTaGATATTAGTCGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICGGKGI*ILVGFL
Trigger: GAGAAAACCGACTAATATGCAGATGCCCTTTCCTCC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAGGAGGAAAGGGCATCTaGATATTAGTCGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQGGKGI*ILVGFL
Trigger: GAGAAAACCGACTAATATGCAGATGCCCTTTCCTCC...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAACAATCCCAGTTCCTaGCCACAGGGAGTTTATGTT +
Preference number: 4 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQNNPSS*PQGVYV
Trigger: AACATAAACTCCCTGTGGGCAGGAACTGGGATTGTT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGTGCCACTGCACTCCTaGCTGAAAAAGAATATGCAA +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPVPLHS*LKKNMQ
Trigger: TTGCATATTCTTTTTCAGGCAGGAGTGCAGTGGCAC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTCCGGTGGATCCTCATaGCTGCACGTTTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHESGGSS*LHVSLG
Trigger: CCCAAGGGAAACGTGCAGCCATGAGGATCCACCGGA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCTCGAAAGGCTCCGGTaGATCCTCATGGCTGCACGT +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHELERLR*ILMAAR
Trigger: ACGTGCAGCCATGAGGATCCACCGGAGCCTTTCGAG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCCAGCAGATGGAGTGTaGTTTATAGATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLPADGV*FIDGHR
Trigger: CCTGTGCCCATCTATAAACCACACTCCATCTGCTGG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAATGGTGGAAGCGTCTaGAGAACTGGTAGAGGATTC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSNGGSV*RTGRGF
Trigger: GAATCCTCTACCAGTTCTCCAGACGCTTCCACCATT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTGTTGCGCTTCACCTTaGCCGTGGTGGGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHECCASP*PWWEPH
Trigger: ATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTGGGTCACAGGAGGCTaGTTAGGAATTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFWVTGG*LGISQE
Trigger: CTCTTGAGAAATTCCTAACCAGCCTCCTGTGACCCA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTCTTTTTATCTACCCTaGTGCCTGGCAAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSFYLP*CLASNK
Trigger: TTTGTTGCTTGCCAGGCACCAGGGTAGATAAAAAGA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAGCCAGGGTCAGCTATaGAAAGCAAGAGAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFSQGQL*KARESN
Trigger: GTTAGACTCTCTTGCTTTCCATAGCTGACCCTGGCT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGAGATTATTCAGCTATTaGAGCCAATCAAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKRLFSY*SQSKSF
Trigger: AAAGGACTTTGATTGGCTCCAATAGCTGAATAATCT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACAATTTCTCCACAGCTaGTCCCTATGTTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKQFLHS*SLCFGG
Trigger: ACCACCAAAACATAGGGACCAGCTGTGGAGAAATTG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGCCCTGGGGAAGCAGTaGAAATCAACAATCCCAGTT +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQALGKQ*KSTIPV
Trigger: AACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp AGTACTCACAATTTCTCCACAGCTGGTCCCTATGTTTaGGTGGTGCTGACTTCACTCTCATCCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: STHNFSTAGPYV*VVLTSLSSSPE
Trigger: TTCTGGAGAGGATGAGAGTGAAGTCAGCACCACCAAAACATAGGGACCAGCTGTGGAGAAATTGTGAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp TATCTTGAAAGCCCAGCAGTCAGCCAGGTAAGATCTTaGAGGCTACATAGTTTAGGGGTGGGAAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: YLESPAVSQVRS*RLHSLGVGRAR
Trigger: TCTTGCTCTTCCCACCCCTAAACTATGTAGCCTCAAAGATCTTACCTGGCTGACTGCTGGGCTTTCAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCACCTCCCTCTTTGTTaGCCTGTTATTTATTGTGCA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICHLPLC*PVIYCA
Trigger: TGCACAATAAATAACAGGTCAACAAAGAGGGAGGTG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAGGATGCATGTTCAGTaGGGTCAAATAACCTACTCC +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSRMHVQ*GQITYS
Trigger: GGAGTAGGTTATTTGACCTCACTGAACATGCATCCT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATTGCAGGCCATATTCTaGCCCTACCCATTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKLQAIF*PYPLAL
Trigger: TAAGGCCAATGGGTAGGGTCAGAATATGGCCTGCAA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCCGATTTGTAAGGTGTaGATTAGAGCCAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPPICKV*IRARYE
Trigger: TTCATACCTGGCTCTAATTCACACCTTACAAATCGG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACTAGTTTGCAGGAGATaGCACCGAGTGTGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKLVCRR*HRVWSY
Trigger: GTAAGACCACACTCGGTGTCATCTCCTGCAAACTAG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGATTGCACATGTCAAGGTGTGTACAGAATCTACTGAGGGGAAGATCCCCGGAGTTAAGCAGCATGATTaGACATGTCAAGGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: MIAHVKVCTESTEGKIPGVKQHD*TCQGVY
Trigger: GTACACACCTTGACATGTGCAATCATGCTGCTTAAC...TCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGAGAACCTCCTTCTCTaGTCTGTTGGAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQENLLL*SVGTKA
Trigger: AGCCTTTGTTCCAACAGAGCAGAGAAGGAGGTTCTC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGATGGGGACTGGAGCCTaGTCAGCTTTCACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEMGTGA*SAFTFQ
Trigger: CTGGAAGGTGAAAGCTGAGCAGGCTCCAGTCCCCAT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTTTTATCTACCCTGGTaGCTGGCAAGCAACAAACAA +
Preference number: 4 (lower is better)
Translates to: LLSESTEIHTPLSKETICFYLPW*LASNKQ
Trigger: TTGTTTGTTGCTTGCCAGGCACCAGGGTAGATAAAA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATTCAAGCCATTCTCCTaGTTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKFKPFS*FSLLSS
Trigger: GCTACTCAGGAGGCTGAAGCAGGAGAATGGCTTGAA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCCTCGCAGTAAGGTGTaGAACATCTTCCAGCCACGC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEPRSKV*NIFQPR
Trigger: GCGTGGCTGGAAGATGTTCCACACCTTACTGCGAGG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCCTTCTCTGCTCTGTTaGAACAAAGGCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQPSLLC*NKGSLF
Trigger: GAACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCTCTATCCTCTCCAGTaGTCTGAACATAGAGAACCT +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLYPLQ*SEHREP
Trigger: AGGTTCTCTATGTTCAGACCACTGGAGAGGATAGAG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGCCTACTTGCACACTTaGCTGAACAGAGACAATGGT +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLAYLHT*LNRDNG
Trigger: ACCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTCTGACCCTACCCATTaGCCTTACTTTTTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSSDPTH*PYFFKA
Trigger: TGCCTTGAAAAAGTAAGGCCAATGGGTAGGGTCAGA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACATTTCAGGCAAAGGTaGGGTGGACGCCGATTTGTA +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKHFRQR*GGRRFV
Trigger: TACAAATCGGCGTCCACCCCACCTTTGCCTGAAATG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTAACACCTGTACCGTATaGTCATTTGTAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSNTCTV*SFVISG
Trigger: TCCTGAAATTACAAATGACCATACGGTACAGGTGTT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAATGTCCTCAAAACATaGCAGCAAATTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKNVLKT*QQIQAQ
Trigger: CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTCCCCCTCCAGACAGTaGTCTTCTCCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHESPSRQ*SSPFRK
Trigger: CTTCCTGAAGGGAGAAGACCACTGTCTGGAGGGGGA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCTTGGGCAAAATGCCTaGGCTGTGGTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHELGQNA*AVVLKL
Trigger: CAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTTGCCGTCTGCATCTTaGTGCATTTTCCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHELPSAS*CIFRAR
Trigger: CCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACCATTCAAGAAACCTTaGGGATCTGTGAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKPFKKP*GSVSMP
Trigger: AGGCATGCTCACAGATCCTCAAGGTTTCTTGAATGG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGTTCTGGGGAGGATTTaGGACTGCTCATATGATATG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLVLGRI*DCSYDM
Trigger: CATATCATATGAGCAGTCTCAAATCCTCCCCAGAAC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACGTCTTCTTGCCGTCTaGATCTTGATGCATTTTCCG +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKRLLAV*ILMHFP
Trigger: CGGAAAATGCATCAAGATGCAGACGGCAAGAAGACG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGTGTGACTCCTGCATATaGATGAACACACAGACACAG +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLCDSCI*MNTQTQ
Trigger: CTGTGTCTGTGTGTTCATGCATATGCAGGAGTCACA...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTTTTATCTACCCTGGTaGCTGGCAAGCAACAAACAA +
Preference number: 4 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSFYLPW*LASNKQ
Trigger: TTGTTTGTTGCTTGCCAGGCACCAGGGTAGATAAAA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCTCAGATTTGTTATTTaGAGGCCAAGGCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLLRFVI*RPRQSQ
Trigger: TTGGCTCTGCCTTGGCCTGCAAATAACAAATCTGAG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTGTAAGCATCAGTCTTaGGCCAAAAGTCATGTCCAC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQCKHQS*AKSHVH
Trigger: GTGGACATGACTTTTGGCCCAAGACTGATGCTTACA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCATCCTCTCCAGAAGTaGACTCTGATCTCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLHPLQK*TLISLN
Trigger: GTTTAAGGAGATCAGAGTCCACTTCTGGAGAGGATG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTCAGAGCAGCGAATGTaGACATGTAGAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHESEQRM*TCRGRR
Trigger: CCTCCTCCCTCTACATGTCCACATTCGCTGCTCTGA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp TGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTaGATGCTGGGATTCCACTTCAATCAAATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: CKHQSWAKSHVH*MLGFHFNQMRQ
Trigger: TTGCCTCATTTGATTGAAGTGGAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGTGTACAGAATCTACTaGGGGGAAGATCCCCGGATT +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEVYRIY*GEDPRI
Trigger: AATCCGGGGATCTTCCCCTCAGTAGATTCTGTACAC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGTTAAGCAGCATGATTaGACATGTCAAGGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQVKQHD*TCQGVY
Trigger: GTACACACCTTGACATGTGCAATCATGCTGCTTAAC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGATAGTACAGTGCATTTaGAGGCCATATTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQIVQCI*RPYSDP
Trigger: AGGGTCAGAATATGGCCTGCAAATGCACTGTACTAT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGACTGTCAGCAAGCCTaGACAGGGAAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEDCQQA*TGKASL
Trigger: AAGAGATGCTTTCCCTGTGCAGGCTTGCTGACAGTC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGAGCAGGAAACCAGTaGGCAAGATTGTCAACTCAT +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKRAGNQ*ARLSTH
Trigger: ATGAGTTGACAATCTTGCCCACTGGTTTCCTGCTCT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGAGTTTATGTTGCTCTaGAAGCAGAGAGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQEFMLL*KQRGKK
Trigger: CTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCCCTGGGGAAGCAGTaGAAATCAACAATCCCAGTT +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEALGKQ*KSTIPV
Trigger: AACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTCTCTGTATGTATCCTaGTGTGTGATCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFSLYVS*CVIFQS
Trigger: GCTTTGAAAGATCACACACCAGGATACATACAGAGA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp TTGATGCTGGGATTCCACTTCAATCAAATGAGGCAATaGGACTCTACTGCAGCTAACTGCTACTTACACATC +
Preference number: 4 (lower is better)
Translates to: LMLGFHFNQMRQ*DSTAANCYLHI
Trigger: GATGTGTAAGTAGCAGTTAGCTGCAGTAGAGTCCAATTGCCTCATTTGATTGAAGTGGAATCCCAGCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
3UTR CAA 72 bp AAGTCCTTTTCTGCTAAAGCTCATTTGAGCTCAGATTaGTTATTTGCAGGCCAAGGCAGAGCCAAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KSFSAKAHLSSD*LFAGQGRAKCK
Trigger: TTTGCACTTGGCTCTGCCTTGGCCTGCAAATAACAAATCTGAGCTCAAATGAGCTTTAGCAGAAAAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAAATCCACACTCCCTTaGGCAAAGAAACGATCTGTA +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKKSTLP*AKKRSV
Trigger: TACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGATTATTCAGCTATTaGAGCCAATCAAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKRLFSY*SQSKSF
Trigger: AAAGGACTTTGATTGGCTCCAATAGCTGAATAATCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGAGTTTATGTTGCTCTaGAAGCAGAGAGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKEFMLL*KQRGKK
Trigger: CTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGGAGCCATGTATTGTaGACAGTTAGAATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKRSHVL*TVRIPG
Trigger: ACCTGGAATTCTAACTGTCCACAATACATGGCTCCT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGTTCTGGGGAGGATTTaGGACTGCTCATATGATATG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEVLGRI*DCSYDM
Trigger: CATATCATATGAGCAGTCTCAAATCCTCCCCAGAAC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTGTGACTCCTGCATATaGATGAACACACAGACACAG +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHECDSCI*MNTQTQ
Trigger: CTGTGTCTGTGTGTTCATGCATATGCAGGAGTCACA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGTGTCACACACACATaGATTCAGACTTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSVTHT*IQTFTF
Trigger: AAAGGTGAAAGTCTGAATGCATGTGTGTGTGACACT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGAACACCTGTACCGTATaGTCATTTGTAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLNTCTV*SFVISG
Trigger: TCCTGAAATTACAAATGACCATACGGTACAGGTGTT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGCACTGCACTCCTGCCTaGAAAAGAATATGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEHCTPA*KRICKK
Trigger: TTTCTTGCATATTCTTTTTCAGGCAGGAGTGCAGTG...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCATAGTTTTGAGATGTaGATTCTTTCGACTCTAGAT +
Preference number: 4 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQHSFEM*ILSTLD
Trigger: ATCTAGAGTCGAAAGAATGCACATCTCAAAACTATG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGATCTACCCTGGTGCCTaGCAAGCAACAAACAAATAT +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEIYPGA*QATNKY
Trigger: ATATTTGTTTGTTGCTTGCCAGGCACCAGGGTAGAT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR TCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTTCAGGAAGATATATTaGGGAGCCATGTATTGTGGA +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEFRKIY*GAMYCG
Trigger: TCCACAATACATGGCTCCTCAATATATCTTCCTGAA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR GCA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAACATAGTTTTGAGATGTaGATTCTTTCGACTCTAGAT +
Preference number: 4 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKHSFEM*ILSTLD
Trigger: ATCTAGAGTCGAAAGAATGCACATCTCAAAACTATG...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CCA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTCTCTGTATGTATCCTaGTGTGTGATCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ARHCSEMFTCIISLNLHESLYVS*CVIFQS
Trigger: GCTTTGAAAGATCACACACCAGGATACATACAGAGA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS CCA 90 bp CCGGAGGCCGTACCAGGGAGCTCTGGGCGGGGCCCACGGGCAGGATaGGCCGCACGAATCTGCGCTGGGAGCCCACAGCGGCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: PEAVPGSSGRGPRAG*AARICAGSPQRRGR
Trigger: CCTTCCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCCCCGCCCAGAGCTCCCTGGTACGGCCTCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS GCA 90 bp GCGGCAGCGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCTaGGAGCAGCGGGCGGTGAGGGGCGCTGTCCCGGGCGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: AAASRQFSWDRCCSS*EQRAVRGAVPGVPS
Trigger: GGAGGGGACGCCCGGGACAGCGCCCCTCACCGCCCGCTGCTCGCAGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS GCA 90 bp AGGTCGTCCGCGGCAGCGTCCAGGCAGTTCTCGTGGGATCGATGCTaGTCCTCCTGCGAGCAGCGGGCGGTGAGGGGCGCTGTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: RSSAAASRQFSWDRC*SSCEQRAVRGAVPG
Trigger: GCCCGGGACAGCGCCCCTCACCGCCCGCTGCTCGCAGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGACGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS GCA 90 bp AGCAGGTCGTCCGCGGCAGCGTCCAGGCAGTTCTCGTGGGATCGATaGTGCTCCTCCTGCGAGCAGCGGGCGGTGAGGGGCGCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: SRSSAAASRQFSWDR*CSSCEQRAVRGAVP
Trigger: CGGGACAGCGCCCCTCACCGCCCGCTGCTCGCAGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGACGACCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS CCA 90 bp TGTAGATCCAGCAGGTCGTCCGCGGCAGCGTCCAGGCAGTTCTCGTaGGATCGATGCTGCTCCTCCTGCGAGCAGCGGGCGGTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: CRSSRSSAAASRQFS*DRCCSSCEQRAVRG
Trigger: GCCCCTCACCGCCCGCTGCTCGCAGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGACGACCTGCTGGATCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS-3UTR CAA 90 bp CGGGCAGGATGGGCCGCACGAATCTGCGCTGGGAGCCCACAGCGGCGGGGAAGGATCTTCCAGCCACGCTaGCCCCATGGCGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RAGWAARICAGSPQRRGRIFQPR*PHGVFL
Trigger: CAAGAAGACGCCATGGGGCAAGCGTGGCTGGAAGAT...CCTTCCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS GCA 90 bp GGCTGGCTGCCTGTCCTCAACGCGGGCTGTCTCTCTGCACACCTGTaGATGCATCGGCACAGGTCCCTGAGCAGGGCTGCTCCCAGCACG +
Preference number: 5 (lower is better)
Translates to: GWLPVLNAGCLSAHL*MHRHRSLSRAAPST
Trigger: CGTGCTGGGAGCAGCCCTGCTCAGGGACCTGTGCCGATGCATGCACAGGTGTGCAGAGAGACAGCCCGCGTTGAGGACAGGCAGCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS-3UTR CAA 90 bp CGTCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCAGGGAGCTCTGGGCGGCTCTGGGGACTGTGCTaGGGGCATAGGGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: RPGSSRGIDAAPPGSSGRLWGLC*GHRAPR
Trigger: CCTGGGAGCCCTATGCCCCAAGCACAGTCCCCAGAG...CCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS TCA 90 bp CGGGCTGTCTCTCTGCACACCTGTGCATGCATCGGCACAGGTCCCTaGGCAGGGCTGCTCCCAGCACGCCACCCTGTTTGTGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RAVSLHTCACIGTGP*AGLLPARHPVCGQQ
Trigger: CTGCTGCCCACAAACAGGGTGGCGTGCTGGGAGCAGCCCTGCTCAGGGACCTGTGCCGATGCATGCACAGGTGTGCAGAGAGACAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS TCA 90 bp CCCGTGACCAGGAGGTGCTGCAGGAGCCCCCTCAGCGGCAGCCACTaGGGCCCAGCAGATGGAGTGTGGTTTATAGATGGGCACAGGGAA +
Preference number: 5 (lower is better)
Translates to: PVTRRCCRSPLSGSH*GPADGVWFIDGHRE
Trigger: TTCCCTGTGCCCATCTATAAACCACACTCCATCTGCTGGGCCTCAGTGGCTGCCGCTGAGGGGGCTCCTGCAGCACCTCCTGGTCACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
CDS GCA 90 bp CCCGGTAGATGGCTGTTCACTGGTGACCCTGGTGATGCTGTGTTCTaGCTGTGCTCCCTCTGGGCAGAGGGGCTCCCCAGGTGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: PGRWLFTGDPGDAVF*LCSLWAEGLPRCVS
Trigger: GCTCACACACCTGGGGAGCCCCTCTGCCCAGAGGGAGCACAGGCAGAACACAGCATCACCAGGGTCACCAGTGAACAGCCATCTACCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS GCA 90 bp CTCTGCACACCTGTGCATGCATCGGCACAGGTCCCTGAGCAGGGCTaGTCCCAGCACGCCACCCTGTTTGTGGGCAGCAGACACTCACTC +
Preference number: 5 (lower is better)
Translates to: LCTPVHASAQVPEQG*SQHATLFVGSRHSL
Trigger: GAGTGAGTGTCTGCTGCCCACAAACAGGGTGGCGTGCTGGGAGCAGCCCTGCTCAGGGACCTGTGCCGATGCATGCACAGGTGTGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS GCA 90 bp AAGGAACATGGGCTGGCTGCCTGTCCTCAACGCGGGCTGTCTCTCTaGACACCTGTGCATGCATCGGCACAGGTCCCTGAGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: KEHGLAACPQRGLSL*TPVHASAQVPEQGC
Trigger: GCAGCCCTGCTCAGGGACCTGTGCCGATGCATGCACAGGTGTGCAGAGAGACAGCCCGCGTTGAGGACAGGCAGCCAGCCCATGTTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS-3UTR CAA 90 bp AAATGCCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCTCCTGGGACGATGCAGGTGGCCGCAGCCAAGTaGATGCGCGCGATCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KCLSCGVEAAGCPPGTMQVAAAK*MRAIQE
Trigger: CTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCAC...CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp TGCGCAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCACTGCGCTCTGAGATGTaGCGCTTCACCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: CAAGRRAASWCNAWRGWPLRSEM*RFTLAV
Trigger: CACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAG...TGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS CCA 90 bp GAAGAACATGCTCTCCTCCTCAGCTCCCCACTGTGGGGAAGAGTCTaGGGTTCCCTCTCTCAGCCATGCCTGGCCCTCTCCCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: EEHALLLSSPLWGRV*GSLSQPCLALSLRL
Trigger: GAGCCTGAGGGAGAGGGCCAGGCATGGCTGAGAGAGGGAACCCCAGACTCTTCCCCACAGTGGGGAGCTGAGGAGGAGAGCATGTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
CDS-3UTR CAA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCGGCTGCACGTTTCCCTaGGGCACTCTCCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: ACVERSTEKSPEPGLGLAGCTFP*GTLLGG
Trigger: CCCACCCAGGAGAGTGCCCAAGGGAAACGTGCAGCC...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCTCTGGGGACTGTGCTaGGGGCATAGGGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ACVERSTEKSPEPGLGLALWGLC*GHRAPR
Trigger: CCTGGGAGCCCTATGCCCCAAGCACAGTCCCCAGAG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACACCTCCCTCTTCCCTaGGGCGTGGCCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAHLPLP*GVARDW
Trigger: CCAGTCCCTGGCCACGCCCAAGGGAAGAGGGAGGTG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS TCA 90 bp TCACCTGGGGCCAAAAAGGACCTCCTCTCTGCCAGCCCTCAGGGCTaGGAGAGGCCCAAGGTTGCACAGGATGTGCAGCAGGGCCAAGAT +
Preference number: 5 (lower is better)
Translates to: SPGAKKDLLSASPQG*ERPKVAQDVQQGQD
Trigger: ATCTTGGCCCTGCTGCACATCCTGTGCAACCTTGGGCCTCTCTCAGCCCTGAGGGCTGGCAGAGAGGAGGTCCTTTTTGGCCCCAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000485525.5
CDS GCA 90 bp TCTGGGCCTGCAGGATGCCTGCCCAGAACACTACCTGTGTGGACGTaGTCCGGTTCTGCTTTGGGCTCCCCGGTAGATGGCTGTTCACTG +
Preference number: 5 (lower is better)
Translates to: SGPAGCLPRTLPVWT*SGSALGSPVDGCSL
Trigger: CAGTGAACAGCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCTGGGCAGGCATCCTGCAGGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS CCA 90 bp CACACATCTGGGCCTGCAGGATGCCTGCCCAGAACACTACCTGTGTaGACGTGCTCCGGTTCTGCTTTGGGCTCCCCGGTAGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: HTSGPAGCLPRTLPV*TCSGSALGSPVDGC
Trigger: ACAGCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCTGGGCAGGCATCCTGCAGGCCCAGATGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGTGGCCGCAGCCAAGTaGATGCGCGCGATCCAGGAG +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAVAAAK*MRAIQE
Trigger: CTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCAC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GATGCCCTGCTTGTAGGTGGGCACTGTGGGATCCTGAGCCAGCTGAAGGAAGGGATGTTGCGCTTCACCTaGGCCGTGGTGGGAGCCTCA +
Preference number: 5 (lower is better)
Translates to: DALLVGGHCGILSQLKEGMLRFT*AVVGAS
Trigger: TGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACAT...CCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS GCA 90 bp AGGATGCCTGCCCAGAACACTACCTGTGTGGACGTGCTCCGGTTCTaGTTTGGGCTCCCCGGTAGATGGCTGTTCACTGGTGACCCTGGT +
Preference number: 5 (lower is better)
Translates to: RMPAQNTTCVDVLRF*FGLPGRWLFTGDPG
Trigger: ACCAGGGTCACCAGTGAACAGCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCTGGGCAGGCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS GCA 90 bp AGGTGGGGGCACCAGCATCCAGACACACTCAGACACACGCAAGTGTaGATATGCCCCCTGTCCCTCACACCACCTCCAGTCTCTCACCAG +
Preference number: 5 (lower is better)
Translates to: RWGHQHPDTLRHTQV*ICPLSLTPPPVSHQ
Trigger: CTGGTGAGAGACTGGAGGTGGTGTGAGGGACAGGGGGCATATGCACACTTGCGTGTGTCTGAGTGTGTCTGGATGCTGGTGCCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460725.5
ENST00000465592.1
CDS CCA 90 bp TGCCCAGGAGTGCCCCGGAGCATCTGCTTTCACGGTCTCACTGTGTaGACTAGGGGGAGCACTGGCCGCTGGAGAAACTGGGAATCCATA +
Preference number: 5 (lower is better)
Translates to: CPGVPRSICFHGLTV*TRGSTGRWRNWESI
Trigger: TATGGATTCCCAGTTTCTCCAGCGGCCAGTGCTCCCCCTAGTCCACACAGTGAGACCGTGAAAGCAGATGCTCCGGGGCACTCCTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS CCA 90 bp GTGCTGCAGGAGCCCCCTCAGCGGCAGCCACTGAGGCCCAGCAGATaGAGTGTGGTTTATAGATGGGCACAGGGAATGGAGGGGTACAAT +
Preference number: 5 (lower is better)
Translates to: VLQEPPQRQPLRPSR*SVVYRWAQGMEGYN
Trigger: ATTGTACCCCTCCATTCCCTGTGCCCATCTATAAACCACACTCCATCTGCTGGGCCTCAGTGGCTGCCGCTGAGGGGGCTCCTGCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
CDS CCA 90 bp CACAGGTCCCTGAGCAGGGCTGCTCCCAGCACGCCACCCTGTTTGTaGGCAGCAGACACTCACTCTTCTTGCCGTCTGCATCTTGATGCA +
Preference number: 5 (lower is better)
Translates to: HRSLSRAAPSTPPCL*AADTHSSCRLHLDA
Trigger: TGCATCAAGATGCAGACGGCAAGAAGAGTGAGTGTCTGCTGCCCACAAACAGGGTGGCGTGCTGGGAGCAGCCCTGCTCAGGGACCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 90 bp CAAGCCTATCTCCCTCCAAAGGACCCAAGAATGGATGGCTTGGCCTaGGCTCCCCAAGAGCACTTCCTGGCTCACAGTCGGCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: QAYLPPKDPRMDGLA*APQEHFLAHSRLAQ
Trigger: CTGGGCAAGCCGACTGTGAGCCAGGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGAGATAGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485525.5
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAAAGGGCTTGCTCATCTaGCCAGCTGGCAGGGACGGC +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAKGLLI*PAGRDG
Trigger: GCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCTT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGGTGCCTGGGCAGCATaGACTATGGCAGGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAGAWAA*TMAGQA
Trigger: TGCCTGGCCTGCCATAGTCAATGCTGCCCAGGCACC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS TCA 90 bp GTGCCTCACACAGCATCCAGCACATGGTCACTGTTCAGTACGCACTaGGGAAGGAACATGGGCTGGCTGCCTGTCCTCAACGCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: VPHTASSTWSLFSTH*GRNMGWLPVLNAGC
Trigger: ACAGCCCGCGTTGAGGACAGGCAGCCAGCCCATGTTCCTTCCTCAGTGCGTACTGAACAGTGACCATGTGCTGGATGCTGTGTGAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS GCA 90 bp GGGCACCAGCATCCAGACACACTCAGACACACGCAAGTGTGCATATaGCCCCTGTCCCTCACACCACCTCCAGTCTCTCACCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: GHQHPDTLRHTQVCI*PLSLTPPPVSHQDA
Trigger: TGCATCCTGGTGAGAGACTGGAGGTGGTGTGAGGGACAGGGGGCATATGCACACTTGCGTGTGTCTGAGTGTGTCTGGATGCTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460725.5
ENST00000465592.1
CDS GCA 90 bp CATGGTCACTGTTCAGTACGCACTGAGGAAGGAACATGGGCTGGCTaGCTGTCCTCAACGCGGGCTGTCTCTCTGCACACCTGTGCATGC +
Preference number: 5 (lower is better)
Translates to: HGHCSVRTEEGTWAG*LSSTRAVSLHTCAC
Trigger: GCATGCACAGGTGTGCAGAGAGACAGCCCGCGTTGAGGACAGGCAGCCAGCCCATGTTCCTTCCTCAGTGCGTACTGAACAGTGACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 90 bp CTCCGGTGGATCCTCATGGCTGCACGTTTCCCTTGGGCACTCTCCTaGGTGGGGCTCCAGGCTGTCTCCCAAGTACAGGTTGAGAATTTC +
Preference number: 5 (lower is better)
Translates to: LRWILMAARFPWALS*VGLQAVSQVQVENF
Trigger: GAAATTCTCAACCTGTACTTGGGAGACAGCCTGGAGCCCCACCCAGGAGAGTGCCCAAGGGAAACGTGCAGCCATGAGGATCCACCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS CCA 90 bp GATTCTGGGCTGCTAGGCTCTCTGTCCTGGGAGTTAAGAGTCACCTaGGGCCAAAAAGGACCTCCTCTCTGCCAGCCCTCAGGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: DSGLLGSLSWELRVT*GQKGPPLCQPSGLR
Trigger: TCTCAGCCCTGAGGGCTGGCAGAGAGGAGGTCCTTTTTGGCCCCAGGTGACTCTTAACTCCCAGGACAGAGAGCCTAGCAGCCCAGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441564.7
CDS CCA 90 bp CATCCAGCACATGGTCACTGTTCAGTACGCACTGAGGAAGGAACATaGGCTGGCTGCCTGTCCTCAACGCGGGCTGTCTCTCTGCACACC +
Preference number: 5 (lower is better)
Translates to: HPAHGHCSVRTEEGT*AGCLSSTRAVSLHT
Trigger: GGTGTGCAGAGAGACAGCCCGCGTTGAGGACAGGCAGCCAGCCCATGTTCCTTCCTCAGTGCGTACTGAACAGTGACCATGTGCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 90 bp AGGACCAAGCCTATCTCCCTCCAAAGGACCCAAGAATGGATGGCTTaGCCTGGGCTCCCCAAGAGCACTTCCTGGCTCACAGTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: RTKPISLQRTQEWMA*PGLPKSTSWLTVGL
Trigger: CAAGCCGACTGTGAGCCAGGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGAGATAGGCTTGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485525.5
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTGCTCCGGTTCTGCTTaGGGCTCCCCGGTAGATGGC +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKCSGSA*GSPVDG
Trigger: GCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CAGCTGGAAGACGTGCGGCTTCTTGGTGTAATGCGTGGCGGGGGTGGCCAGCGATTCCAGGCTACCTTGTaGTTCCTGACGCCATTAGCT +
Preference number: 5 (lower is better)
Translates to: QLEDVRLLGVMRGGGGQRFQATL*FLTPLA
Trigger: AGCTAATGGCGTCAGGAACAACAAGGTAGCCTGGAA...TCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACAGGAGCTCATCTCCTaGGCAGTGGGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAQELIS*AVGAWK
Trigger: CTTCCAGGCACCCACTGCCAAGGAGATGAGCTCCTG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATTCTTCAGGCTGAGCTaGGGCTCCCGAGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAFFRLS*GSRVPP
Trigger: TGGAGGCACTCGGGAGCCCAAGCTCAGCCTGAAGAA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGAGAGCAAGACCATCCTaGGGGCTGTGGCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKRARPS*GLWLPW
Trigger: CCAGGGGAGCCACAGCCCCAAGGATGGTCTTGCTCT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGGTGCCTGGGCAGCATaGACTATGGCAGGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKGAWAA*TMAGQA
Trigger: TGCCTGGCCTGCCATAGTCAATGCTGCCCAGGCACC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS GCA 90 bp GTGGTCAGGGAGTCTGTAGTCACCCATCATCCACTGAGCAAAAGCTaGCCAGGAGTGCCCCGGAGCATCTGCTTTCACGGTCTCACTGTG +
Preference number: 5 (lower is better)
Translates to: VVRESVVTHHPLSKS*PGVPRSICFHGLTV
Trigger: CACAGTGAGACCGTGAAAGCAGATGCTCCGGGGCACTCCTGGGCAGCTTTTGCTCAGTGGATGATGGGTGACTACAGACTCCCTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS GCA 90 bp GGCGATGCCTGGGCTTCATCCCTGGTCCCCAGCTCCTCTTCCTGCTaGCGCTTTCTAAGAATTTCTGATCATACGGCCATTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GDAWASSLVPSSSSC*RFLRISDHTAIPTR
Trigger: CCTGGTGGGAATGGCCGTATGATCAGAAATTCTTAGAAAGCGGCAGCAGGAAGAGGAGCTGGGGACCAGGGATGAAGCCCAGGCATCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487574.1
CDS CCA 90 bp ATCCATATCTACCCTCCAAAGGACCCAAGAATGGATGGCTTGGCCTaGGCTCCCCAAGAGCACTTCCTGGCTCACAGTCGGCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: IHIYPPKDPRMDGLA*APQEHFLAHSRLAQ
Trigger: CTGGGCAAGCCGACTGTGAGCCAGGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGTAGATATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245796.11
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGGCTGCACGTTTCCCTaGGGCACTCTCCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSGCTFP*GTLLGG
Trigger: CCCACCCAGGAGAGTGCCCAAGGGAAACGTGCAGCC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAATGCCTGAGCTGTGGTGTTGAAGCTGCGGGCTGCCCTCCTGGGACGATGCAGGCATCTAGTGTCCACTaGGGCAAAATGCCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: KCLSCGVEAAGCPPGTMQASSVH*GKMPEL
Trigger: CAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGC...CTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTCTCTGGGGACTGTGCTaGGGGCATAGGGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSLWGLC*GHRAPR
Trigger: CCTGGGAGCCCTATGCCCCAAGCACAGTCCCCAGAG...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACAAGGGCTTGCTCATCTaGCCAGCTGGCAGGGACGGC +
Preference number: 5 (lower is better)
Translates to: GCSPSVSKSEDCEASSVHKGLLI*PAGRDG
Trigger: GCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCTT...GTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp GCTGGACGTCTCCAGTCTCTGCAGGCCTGGCTGTTCCTTCACTCTTTACTTCCTCAGGAGCTCATCTCCTaGGCAGTGGGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: AGRLQSLQAWLFLHSLLPQELIS*AVGAWK
Trigger: CTTCCAGGCACCCACTGCCAAGGAGATGAGCTCCTG...AGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAGAGCAAGACCATCCTaGGGGCTGTGGCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPRARPS*GLWLPW
Trigger: CCAGGGGAGCCACAGCCCCAAGGATGGTCTTGCTCT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS CCA 90 bp TTTCTAAGAATTTCTGATCATACGGCCATTCCCACCAGGACCCCCTaGGGCCCACAAGCCTCAGGTGTCAGCAGGGTCAGGGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: FLRISDHTAIPTRTP*GPQASGVSRVRGER
Trigger: TCTCTCTCCCCTGACCCTGCTGACACCTGAGGCTTGTGGGCCCCAGGGGGTCCTGGTGGGAATGGCCGTATGATCAGAAATTCTTAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487574.1
CDS CCA 90 bp ACTGACAAGGAAAAGGCATACTGTGCTGGCAAAGTTGGCCAAGGATaGGGAGGAAGTAGGCGATGCCTGGGCTTCATCCCTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: TDKEKAYCAGKVGQG*GGSRRCLGFIPGPQ
Trigger: CTGGGGACCAGGGATGAAGCCCAGGCATCGCCTACTTCCTCCCCATCCTTGGCCAACTTTGCCAGCACAGTATGCCTTTTCCTTGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487574.1
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCATTTCAGCCCAGCCTaGAGCCCTTCCGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKHFSPA*SPSVFS
Trigger: GGAGAAGACGGAAGGGCTCAAGGCTGGGCTGAAATG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCCTTGCCGTCTGCATCTaGATGCATTTTCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ACVERSTEKSPEPGLGLALAVCI*MHFPSQ
Trigger: CTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAG...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGATCTTCCAGCCACGCTaGCCCCATGGCGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKIFQPR*PHGVFL
Trigger: CAAGAAGACGCCATGGGGCAAGCGTGGCTGGAAGAT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGTGGCCGCAGCCAAGTaGATGCGCGCGATCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLVAAAK*MRAIQE
Trigger: CTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCAC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GGCTGTTCCCCATCCGTCTCCAAGAGTGAAGACTGTGAAGCATCTAGTGTCCACTTCTTCAGGCTGAGCTaGGGCTCCCGAGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GCSPSVSKSEDCEASSVHFFRLS*GSRVPP
Trigger: TGGAGGCACTCGGGAGCCCAAGCTCAGCCTGAAGAA...GTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCTGCGCTCTGAGATGTaGCGCTTCACCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRLRSEM*RFTLAV
Trigger: CACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCACCTCCCTCTTCCCTaGGGCGTGGCCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPHLPLP*GVARDW
Trigger: CCAGTCCCTGGCCACGCCCAAGGGAAGAGGGAGGTG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS TCA 90 bp TGCCCACCCTCCAGACTGTTCTGGGCCTCTCTCAGTCTCCCATTCTaGCAGGGGTGTTGGCTCCTTTCCTACCTTCAGGAAGTAGAGAAC +
Preference number: 5 (lower is better)
Translates to: CPPSRLFWASLSLPF*QGCWLLSYLQEVEN
Trigger: GTTCTCTACTTCCTGAAGGTAGGAAAGGAGCCAACACCCCTGTCAGAATGGGAGACTGAGAGAGGCCCAGAACAGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460725.5
CDS CCA 90 bp TTGCCCCATGGCGCTGTTCCAGGAACAGAACACAAATGTTGTAGGTaGGGGCACCAGCATCCAGACACACTCAGACACACGCAAGTGTGC +
Preference number: 5 (lower is better)
Translates to: LPHGAVPGTEHKCCR*GHQHPDTLRHTQVC
Trigger: GCACACTTGCGTGTGTCTGAGTGTGTCTGGATGCTGGTGCCCCCACCTACAACATTTGTGTTCTGTTCCTGGAACAGCGCCATGGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460725.5
ENST00000465592.1
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCCAGGGAGGAGCATCTaGTCTGGTAGATTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKPGRSI*SGRFRR
Trigger: CCTCCTGAATCTACCAGACAAGATGCTCCTCCCTGG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCTGGACGTCTCCAGTCTCTGCAGGCCTGGCTGTTCCTTCACTCTTTACTTCCTACGCCATTAGCTAGCTaGTCTCCAGCTGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: AGRLQSLQAWLFLHSLLPTPLAS*SPAGGL
Trigger: GAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGT...AGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTTCTTCAGGCTGAGCTaGGGCTCCCGAGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSFFRLS*GSRVPP
Trigger: TGGAGGCACTCGGGAGCCCAAGCTCAGCCTGAAGAA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAAGCAGAGGCCCCCTCTaGGCGGGCAGCCTACTTGCA +
Preference number: 5 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKSRGPL*AGSLLA
Trigger: TGCAAGTAGGCTGCCCGCCAAGAGGGGGCCTCTGCT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAGGGCCAACCTTACTTaGTGGAGGTGCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMRANLT*WRCKPQ
Trigger: CTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTATATGCACCAGTACTTaGGGAGGCAGAGGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSICTST*GGRGRR
Trigger: CCGCCGGCCTCTGCCTCCCAAAGTACTGGTGCATAT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACAGGAGAGGACTAGTTaGCAGGAGATGACACCGAGT +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAQERTS*QEMTPS
Trigger: ACTCGGTGTCATCTCCTGCAAACTAGTCCTCTCCTG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCCAGGGAGGAGCATCTaGTCTGGTAGATTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRPGRSI*SGRFRR
Trigger: CCTCCTGAATCTACCAGACAAGATGCTCCTCCCTGG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTTGCTCCGGTTCTGCTTaGGGCTCCCCGGTAGATGGC +
Preference number: 5 (lower is better)
Translates to: LLSESTEIHTPLSKETICCSGSA*GSPVDG
Trigger: GCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCA...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAACAGGGAAACAAGGTTaGTCCTTCAGCAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVATGKQG*SFSRER
Trigger: CCTTTCCCTGCTGAAGGACAAACCTTGTTTCCCTGT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGTGGAACAAAGGCTCCTaGTTCCTAGGGTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKWNKGS*FLGFQG
Trigger: ACCCTGGAACCCTAGGAACAAGGAGCCTTTGTTCCA...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAAGCCTACTTGCACACTaGGCTGAACAGAGACAATGG +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVASLLAH*AEQRQW
Trigger: CCATTGTCTCTGTTCAGCCAAGTGTGCAAGTAGGCT...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCCAAGATCACACCATaGCACTCCAGCCTGGGTTAC +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPAKITP*HSSLGY
Trigger: GTAACCCAGGCTGGAGTGCAATGGTGTGATCTTGGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCACTTCCAGAAACTATCTaGAAAGCCCAGCAGTCAGCC +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVALPETI*KAQQSA
Trigger: GGCTGACTGCTGGGCTTTCAAGATAGTTTCTGGAAG...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS GCA 90 bp GAACCATCCCTCGCAGTAAGGTGTGGAACATCTTCCAGCCACGCTTaGCCCATGGCGCTGTTCCAGGAACAGAACACAAATGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: EPSLAVRCGTSSSHA*PMALFQEQNTNVVG
Trigger: ACCTACAACATTTGTGTTCTGTTCCTGGAACAGCGCCATGGGGCAAGCGTGGCTGGAAGATGTTCCACACCTTACTGCGAGGGATGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460725.5
ENST00000465592.1
CDS-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGCATTTCAGCCCAGCCTaGAGCCCTTCCGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLHFSPA*SPSVFS
Trigger: GGAGAAGACGGAAGGGCTCAAGGCTGGGCTGAAATG...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTGCATCTAGTGTCCACTaGGGCAAAATGCCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPASSVH*GKMPEL
Trigger: CAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGC...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CTGGAAGAAGGACAGGTACTCCTCAGCCACAGCCCTGCTAAAGTCATTGTTCTTGGGAAGATCCCCGGATaGCAATGGTGGAAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: LEEGQVLLSHSPAKVIVLGKIPG*QWWKRL
Trigger: CAGACGCTTCCACCATTGCAATCCGGGGATCTTCCC...AAGAACAATGACTTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAAGGGCTTGCTCATCTaGCCAGCTGGCAGGGACGGC +
Preference number: 5 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFKGLLI*PAGRDG
Trigger: GCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCTT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCTTGCCGTCTGCATCTaGATGCATTTTCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRLAVCI*MHFPSQ
Trigger: CTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAACAGGAGCTCATCTCCTaGGCAGTGGGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQQELIS*AVGAWK
Trigger: CTTCCAGGCACCCACTGCCAAGGAGATGAGCTCCTG...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGACAGGGAAACAAGGTTaGTCCTTCAGCAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKTGKQG*SFSRER
Trigger: CCTTTCCCTGCTGAAGGACAAACCTTGTTTCCCTGT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTGGCGGGCAGCCTACTaGCACACTTGGCTGAACAGA +
Preference number: 5 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLWRAAY*HTWLNR
Trigger: TCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTTTTATTGTGCACCCATaGGGTGCATGGCCTAGCCCT +
Preference number: 5 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRFIVHP*GAWPSP
Trigger: AGGGCTAGGCCATGCACCCAATGGGTGCACAATAAA...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAGGGCCAACCTTACTTTGTGGAGGTGCAAGCCCCAGAGCTGGTTACAAGCATGAAAAAGCCACTCTCCTaGGCTGCATTGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: KGQPYFVEVQAPELVTSMKKPLS*AALETL
Trigger: CAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTTT...CATGCTTGTAACCAGCTCTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGGAAAGGAGAATCTCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSGKENL*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGAGATTCTCCTTTCC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCAGAGAAGGCATCAGAGTaGATGACTGCAGCCATCAAT +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVAEKASE*MTAAIN
Trigger: ATTGATGGCTGCAGTCATCAACTCTGATGCCTTCTC...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGATATGCACCAGTACTTaGGGAGGCAGAGGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPICTST*GGRGRR
Trigger: CCGCCGGCCTCTGCCTCCCAAAGTACTGGTGCATAT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCAGGAGAGGACTAGTTaGCAGGAGATGACACCGAGT +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPQERTS*QEMTPS
Trigger: ACTCGGTGTCATCTCCTGCAAACTAGTCCTCTCCTG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACCAGGGAGGAACATTTaGTCTGGTAGGTTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSPGRNI*SGRFRR
Trigger: CCTCCTGAACCTACCAGACAAAATGTTCCTCCCTGG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGCCAGGAAGAGGGGGTaGCTGAAGAACATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LLSESTEIHTPLSKETICARKRG*LKNMLS
Trigger: GGAGAGCATGTTCTTCAGCAACCCCCTCTTCCTGGC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGAAGTTCCAGGCTACCTaGTTGTTCCTGACGCCATTA +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKKFQAT*LFLTPL
Trigger: TAATGGCGTCAGGAACAACAAGGTAGCCTGGAACTT...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCTGGACGTCTCCAGTCTCTGCAGGCCTGGCTGTTCCTTCACTCTTTACTTCCTAAGTTCCAGGCTACCTaGTTGTTCCTGACGCCATTA +
Preference number: 5 (lower is better)
Translates to: AGRLQSLQAWLFLHSLLPKFQAT*LFLTPL
Trigger: TAATGGCGTCAGGAACAACAAGGTAGCCTGGAACTT...AGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTATGTTGCGCTTCACCTaGGCCGTGGTGGGAGCCTCA +
Preference number: 5 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSMLRFT*AVVGAS
Trigger: TGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACAT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTTTTATTGTGCACCCATaGGGTGCATGGCCTAGCCCT +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSFIVHP*GAWPSP
Trigger: AGGGCTAGGCCATGCACCCAATGGGTGCACAATAAA...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCATGTGTAGAAAGGAGCACAGAAAAGTCTCCCGAGCCTGGCCTAGGCCTCGCCACACCTCCCTCTTTGTaGACCTGTTATTTATTGTGC +
Preference number: 5 (lower is better)
Translates to: ACVERSTEKSPEPGLGLATPPSL*TCYLLC
Trigger: GCACAATAAATAACAGGTCAACAAAGAGGGAGGTGT...GGCGAGGCCTAGGCCAGGCTCGGGAGACTTTTCTGTGCTCCTTTCTACACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGCCAAGATCACACCATaGCACTCCAGCCTGGGTTAC +
Preference number: 5 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLAKITP*HSSLGY
Trigger: GTAACCCAGGCTGGAGTGCAATGGTGTGATCTTGGC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGGAGAAGGCATCAGAGTaGATGACTGCAGCCATCAAT +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKEKASE*MTAAIN
Trigger: ATTGATGGCTGCAGTCATCAACTCTGATGCCTTCTC...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGGCTGAGGAAGGAGAATaGCTTGAACCCGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPAEEGE*LEPGRQ
Trigger: CTGCCTCCCGGGTTCAAGCAATTCTCCTTCCTCAGC...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGCCAGGAAGAGGGGGTaGCTGAAGAACATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFARKRG*LKNMLS
Trigger: GGAGAGCATGTTCTTCAGCAACCCCCTCTTCCTGGC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGACGCCATTAGCTAGCTaGTCTCCAGCTGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPTPLAS*SPAGGL
Trigger: GAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAAGTTCCAGGCTACCTaGTTGTTCCTGACGCCATTA +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPKFQAT*LFLTPL
Trigger: TAATGGCGTCAGGAACAACAAGGTAGCCTGGAACTT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CTGGAAGAAGGACAGGTACTCCTCAGCCACAGCCCTGCTAAAGTCATTGTTCTTCTTGCCGTCTGCATCTaGATGCATTTTCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LEEGQVLLSHSPAKVIVLLAVCI*MHFPSQ
Trigger: CTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAG...AAGAACAATGACTTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409656.5
CDS-3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCTGCGCTCTGAGATGTaGCGCTTCACCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLLRSEM*RFTLAV
Trigger: CACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTTGGCGGGCAGCCTACTaGCACACTTGGCTGAACAGA +
Preference number: 5 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSWRAAY*HTWLNR
Trigger: TCTGTTCAGCCAAGTGTGCAAGTAGGCTGCCCGCCA...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GAGAATAGGCTCAAAGAGCCCCAGTGGGCCCATGAAGGAGAGAGGTCTGTGGCATTGACCTGTTATTTATaGTGCACCCATTGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: ENRLKEPQWAHEGERSVALTCYL*CTHWVH
Trigger: ATGCACCCAATGGGTGCACAATAAATAACAGGTCAA...TGCCACAGACCTCTCTCCTTCATGGGCCCACTGGGGCTCTTTGAGCCTATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTCTCCAAGCCCTGAGCTaGGCACTCTTCTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRLQALS*ALFSLK
Trigger: TTTTAAAGAGAAGAGTGCCAAGCTCAGGGCTTGGAG...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAAGGGCTGGGAACAGTaGGCAAAGCCCACACATACC +
Preference number: 5 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQKGWEQ*AKPTHT
Trigger: GGTATGTGTGGGCTTTGCCAACTGTTCCCAGCCCTT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTCACAAGATCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPHKIRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGATCTTGTG...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCACGCCATTAGCTAGCTaGTCTCCAGCTGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFTPLAS*SPAGGL
Trigger: GAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTTCCAGGCTACCTTGTaGTTCCTGACGCCATTAGCT +
Preference number: 5 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLFQATL*FLTPLA
Trigger: AGCTAATGGCGTCAGGAACAACAAGGTAGCCTGGAA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGGAAGATCCCCGGATaGCAATGGTGGAAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLGKIPG*QWWKRL
Trigger: CAGACGCTTCCACCATTGCAATCCGGGGATCTTCCC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGATCTTCCAGCCACGCTaGCCCCATGGCGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQIFQPR*PHGVFL
Trigger: CAAGAAGACGCCATGGGGCAAGCGTGGCTGGAAGAT...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGTGGAACAAAGGCTCCTaGTTCCTAGGGTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPWNKGS*FLGFQG
Trigger: ACCCTGGAACCCTAGGAACAAGGAGCCTTTGTTCCA...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTGACACACATACACACTaGGAGCAAAGAGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSDTHTH*EQRGMK
Trigger: CTTCATCCCTCTTTGCTCCAAGTGTGTATGTGTGTC...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAAAAGTCATGTCCACTaGATGCTGGGATTCCACTTC +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPKSHVH*MLGFHF
Trigger: GAAGTGGAATCCCAGCATCAAGTGGACATGACTTTT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGCTCTCCTTGGCTGCATaGGAGACCCTGTATGATCTG +
Preference number: 5 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPLSLAA*ETLYDL
Trigger: CAGATCATACAGGGTCTCCAATGCAGCCAAGGAGAG...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAAAAAAAGCCACTCTCCTaGGCTGCATTGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQKKPLS*AALETL
Trigger: CAGGGTCTCCAATGCAGCCAAGGAGAGTGGCTTTTT...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATGTAATCCCAGCTACTaGGGAGGCTGGGAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQCNPSY*GGWERR
Trigger: TCTCCTTTCCCAGCCTCCCAAGTAGCTGGGATTACA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAATGTAATCCCAGCTACTaGGGAGGCTGGGAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKCNPSY*GGWERR
Trigger: TCTCCTTTCCCAGCCTCCCAAGTAGCTGGGATTACA...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTCTCCAAGCCCTGAGCTaGGCACTCTTCTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSLQALS*ALFSLK
Trigger: TTTTAAAGAGAAGAGTGCCAAGCTCAGGGCTTGGAG...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTCAGTTGGTCACAGGCTaGTGGAGAGCACCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSQLVTG*WRAPLP
Trigger: AGGAAGAGGTGCTCTCCACAAGCCTGTGACCAACTG...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTAGCCAGGTAAGATCTTaGAGGCTACATAGTTTAGGG +
Preference number: 5 (lower is better)
Translates to: IDYGRPGSHHHLALKIPRSQVRS*RLHSLG
Trigger: CCCTAAACTATGTAGCCTCAAAGATCTTACCTGGCT...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATTGACTATGGCAGGCCAGGCAGCCACCATCATCTGGCTCTGAAGATTCCACGTGAAATCCACACTCCCTaGAGCAAAGAAACGATCTGT +
Preference number: 5 (lower is better)
Translates to: IDYGRPGSHHHLALKIPREIHTP*SKETIC
Trigger: ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTC...ACGTGGAATCTTCAGAGCCAGATGATGGTGGCTGCCTGGCCTGCCATAGTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GGTCCATCCATCCGGGTCACATCTCTGTATGTATCCTGGTGTGTGATCTTTCAATCTCCCAAGTACAGGTaGAGAATTTCCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GPSIRVTSLYVSWCVIFQSPKYR*RISMGW
Trigger: CCAGCCCATGGAAATTCTCAACCTGTACTTGGGAGA...TTGAAAGATCACACACCAGGATACATACAGAGATGTGACCCGGATGGATGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGTCCTTCTCTGCTCTGTaGGAACAAAGGCTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLSFSAL*EQRLLV
Trigger: AACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGGA...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGGGCCAACCTTACTTaGTGGAGGTGCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKRANLT*WRCKPQ
Trigger: CTGGGGCTTGCACCTCCACAAAGTAAGGTTGGCCCT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTAATCAAATGAGGCAATaGGACTCTACTGCAGCTAAC +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPNQMRQ*DSTAAN
Trigger: GTTAGCTGCAGTAGAGTCCAATTGCCTCATTTGATT...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCCTCTCCTTGGCTGCATaGGAGACCCTGTATGATCTG +
Preference number: 5 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLSLAA*ETLYDL
Trigger: CAGATCATACAGGGTCTCCAATGCAGCCAAGGAGAG...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGCAGTTGGTCACAGGCTaGTGGAGAGCACCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLQLVTG*WRAPLP
Trigger: AGGAAGAGGTGCTCTCCACAAGCCTGTGACCAACTG...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGAAGGGCTGGGAACAGTaGGCAAAGCCCACACATACC +
Preference number: 5 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLKGWEQ*AKPTHT
Trigger: GGTATGTGTGGGCTTTGCCAACTGTTCCCAGCCCTT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTCATTTGAGCTCAGATTaGTTATTTGCAGGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSHLSSD*LFAGQG
Trigger: GCCTTGGCCTGCAAATAACAAATCTGAGCTCAAATG...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCAGTCCTGCTCCTTCCAACCCCGACACATTCCATATGTCTCCGTCTCCTGAAGCAGATTATTCAGCTATaGGAGCCAATCAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: PVLLLPTPTHSICLRLLKQIIQL*EPIKVL
Trigger: AAGGACTTTGATTGGCTCCAATAGCTGAATAATCTG...CTTCAGGAGACGGAGACATATGGAATGTGTCGGGGTTGGAAGGAGCAGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCGAGAGAAAAGGGGCCTaGAATCAGAGTGAAGCCCGA +
Preference number: 5 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFERKGA*NQSEAR
Trigger: TCGGGCTTCACTCTGATTCAAGGCCCCTTTTCTCTC...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CCGCGCCCAGCTCATCTTCTTAAAACAAAATCCCTAGGCTGTCCTCCAAGCCCTTTCCTGGATTTGAGTTaGAAACTTCCAGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: PRPAHLLKTKSLGCPPSPFLDLS*KLPGSR
Trigger: TCTGCTTCCTGGAAGTTTCAAACTCAAATCCAGGAA...AGGGCTTGGAGGACAGCCTAGGGATTTTGTTTTAAGAAGATGAGCTGGGCGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTGCTGGTCCCTATGTTTaGGTGGTGCTGACTTCACTC +
Preference number: 5 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSAGPYV*VVLTSL
Trigger: GAGTGAAGTCAGCACCACCAAAACATAGGGACCAGC...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGATGTTGCGCTTCACCTaGGCCGTGGTGGGAGCCTCA +
Preference number: 5 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEMLRFT*AVVGAS
Trigger: TGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACAT...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAAATCAGCTCTGCTCTGTaGATGAGCAGTTGGGTATGT +
Preference number: 5 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKISSAL*MSSWVC
Trigger: ACATACCCAACTGCTCATCAACAGAGCAGAGCTGAT...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AGTTTTGAGATGTGCATTCTTTCGACTCTAGATATCAGGCCCTGGGGAAGCAGTAACCAGTGGGCAAGATaGTCAACTCATGGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: SFEMCILSTLDIRPWGSSNQWAR*STHGVR
Trigger: CCTGACTCCATGAGTTGACAATCTTGCCCACTGGTT...ACTGCTTCCCCAGGGCCTGATATCTAGAGTCGAAAGAATGCACATCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGGAAAGGAGAATCTCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKGKENL*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGAGATTCTCCTTTCC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGAGAGAAAAGGGGCCTaGAATCAGAGTGAAGCCCGA +
Preference number: 5 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLERKGA*NQSEAR
Trigger: TCGGGCTTCACTCTGATTCAAGGCCCCTTTTCTCTC...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACTCTAGATATCAGGCCCTGGGGAAGCAGTGGAAATCAACAATCCCAGTTCCTGGAAATCCACACTCCCTaGAGCAAAGAAACGATCTGT +
Preference number: 5 (lower is better)
Translates to: TLDIRPWGSSGNQQSQFLEIHTP*SKETIC
Trigger: ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTC...CAGGAACTGGGATTGTTGATTTCCACTGCTTCCCCAGGGCCTGATATCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTCTCCCAAGTACAGGTaGAGAATTTCCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQSPKYR*RISMGW
Trigger: CCAGCCCATGGAAATTCTCAACCTGTACTTGGGAGA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGTTCCAGGCTACCTTGTaGTTCCTGACGCCATTAGCT +
Preference number: 5 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQFQATL*FLTPLA
Trigger: AGCTAATGGCGTCAGGAACAACAAGGTAGCCTGGAA...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGGGAAGATCCCCGGATaGCAATGGTGGAAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEGKIPG*QWWKRL
Trigger: CAGACGCTTCCACCATTGCAATCCGGGGATCTTCCC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCATTTGAGCTCAGATTaGTTATTTGCAGGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: LLSESTEIHTPLSKETICHLSSD*LFAGQG
Trigger: GCCTTGGCCTGCAAATAACAAATCTGAGCTCAAATG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ACCCCTAAGGGAAACTGTCGCCACCTTTTACCTCTCTATCCTCTCCAGTGGTCTAGACTATTCCTGGATTaGAGTTTGAAACTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TPKGNCRHLLPLYPLQWSRLFLD*SLKLPG
Trigger: TCCTGGAAGTTTCAAACTCAAATCCAGGAATAGTCT...AGACCACTGGAGAGGATAGAGAGGTAAAAGGTGGCGACAGTTTCCCTTAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGCTGGTCCCTATGTTTaGGTGGTGCTGACTTCACTC +
Preference number: 5 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKAGPYV*VVLTSL
Trigger: GAGTGAAGTCAGCACCACCAAAACATAGGGACCAGC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCTGAGGAAGGAGAATaGCTTGAACCCGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEAEEGE*LEPGRQ
Trigger: CTGCCTCCCGGGTTCAAGCAATTCTCCTTCCTCAGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCAGGAGATGACACCGAGTGTGGTCTTACAGGTAATATAGTAACACCTGTACCGAGCCAGGTAAGATCTTaGAGGCTACATAGTTTAGGG +
Preference number: 5 (lower is better)
Translates to: AGDDTECGLTGNIVTPVPSQVRS*RLHSLG
Trigger: CCCTAAACTATGTAGCCTCAAAGATCTTACCTGGCT...CGGTACAGGTGTTACTATATTACCTGTAAGACCACACTCGGTGTCATCTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCTTCCAGAAACTATCTaGAAAGCCCAGCAGTCAGCC +
Preference number: 5 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQLPETI*KAQQSA
Trigger: GGCTGACTGCTGGGCTTTCAAGATAGTTTCTGGAAG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTGACACACCTCCCTCTTaGTTGACCTGTTATTTATTG +
Preference number: 5 (lower is better)
Translates to: LLSESTEIHTPLSKETICDTPPS*LTCYLL
Trigger: CAATAAATAACAGGTCAACAAAGAGGGAGGTGTGTC...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGGACACACATACACACTaGGAGCAAAGAGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQDTHTH*EQRGMK
Trigger: CTTCATCCCTCTTTGCTCCAAGTGTGTATGTGTGTC...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAGCCATTCAAGAAACCTaGAGGATCTGTGAGCATGCC +
Preference number: 5 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKAIQET*RICEHA
Trigger: GGCATGCTCACAGATCCTCAAGGTTTCTTGAATGGC...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AGGTCCTGGTTCGGTGATGGCACAGGGGCACACATAATAACTTCCTGCCTTTCACACTTTCTGCTATATTaGCACCAAGAAAATGGATCT +
Preference number: 5 (lower is better)
Translates to: RSWFGDGTGAHIITSCLSHFLLY*HQENGS
Trigger: AGATCCATTTTCTTGGTGCAAATATAGCAGAAAGTG...TGAAAGGCAGGAAGTTATTATGTGTGCCCCTGTGCCATCACCGAACCAGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp AAAGAGACTAGCGTGGATAATGTCCTCAAAACATGGCAGCAAATTCAGGCTCAGCACAAGATCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: KETSVDNVLKTWQQIQAQHKIRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGATCTTGTG...CTGAGCCTGAATTTGCTGCCATGTTTTGAGGACATTATCCACGCTAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGGCATCTAGTGTCCACTaGGGCAAAATGCCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEASSVH*GKMPEL
Trigger: CAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGC...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAATCCTTCTCTGCTCTGTaGGAACAAAGGCTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKSFSAL*EQRLLV
Trigger: AACAAGGAGCCTTTGTTCCAACAGAGCAGAGAAGGA...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCTTGACCTGTTATTTATaGTGCACCCATTGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFLTCYL*CTHWVH
Trigger: ATGCACCCAATGGGTGCACAATAAATAACAGGTCAA...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCACACCTCCCTCTTTGTaGACCTGTTATTTATTGTGC +
Preference number: 5 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFTPPSL*TCYLLC
Trigger: GCACAATAAATAACAGGTCAACAAAGAGGGAGGTGT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CTGCTCAGTGAGAGCACTGAAATCCACACTCCCTTGAGCAAAGAAACGATCTGTCAGATTATTCAGCTATaGGAGCCAATCAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LLSESTEIHTPLSKETICQIIQL*EPIKVL
Trigger: AAGGACTTTGATTGGCTCCAATAGCTGAATAATCTG...ACAGATCGTTTCTTTGCTCAAGGGAGTGTGGATTTCAGTGCTCTCACTGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGGGATTCAATATATTCCTCACCTaGTTCTGGGGAGGATTTGAG +
Preference number: 5 (lower is better)
Translates to: VCKHQSWAKSHVHLMLGFNIFLT*FWGGFE
Trigger: CTCAAATCCTCCCCAGAACAAGGTGAGGAATATATT...GAATCCCAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAAAAGTCATGTCCACTaGATGCTGGGATTCCACTTC +
Preference number: 5 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKKSHVH*MLGFHF
Trigger: GAAGTGGAATCCCAGCATCAAGTGGACATGACTTTT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GTTCCTGCCCACAGGGAGTTTATGTTGCTCTGGAAGCAGAGAGGCAAAAAGAAACACTTTCTGCTATATTaGCACCAAGAAAATGGATCT +
Preference number: 5 (lower is better)
Translates to: VPAHREFMLLWKQRGKKKHFLLY*HQENGS
Trigger: AGATCCATTTTCTTGGTGCAAATATAGCAGAAAGTG...TTTCTTTTTGCCTCTCTGCTTCCAGAGCAACATAAACTCCCTGTGGGCAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp CACTTAGTTTGTAAGCATCAGTCTTGGGCCAAAAGTCATGTCCACTTGATGCTGAATATATTCCTCACCTaGTTCTGGGGAGGATTTGAG +
Preference number: 5 (lower is better)
Translates to: HLVCKHQSWAKSHVHLMLNIFLT*FWGGFE
Trigger: CTCAAATCCTCCCCAGAACAAGGTGAGGAATATATT...CAGCATCAAGTGGACATGACTTTTGGCCCAAGACTGATGCTTACAAACTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS CCA 90 bp CTCAGGACCTTTGCTAAACCATTAAGACCCAGCGGTAAGAAATGCTaGTCCTTTTGTACGTTTCCTTCATTTAATTTTAAAGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: LRTFAKPLRPSGKKC*SFCTFPSFNFKEAG
Trigger: TCCTGCCTCTTTAAAATTAAATGAAGGAAACGTACAAAAGGACCAGCATTTCTTACCGCTGGGTCTTAATGGTTTAGCAAAGGTCCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418251.6
ENST00000485525.5
CDS-3UTR CAA 90 bp ATGAAGCCTCACCTGACCTGGATACAGATTATTCAGCTATTGGAGCCAATCAAAAGACTATTCCTGGATTaGAGTTTGAAACTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: MKPHLTWIQIIQLLEPIKRLFLD*SLKLPG
Trigger: TCCTGGAAGTTTCAAACTCAAATCCAGGAATAGTCT...TTTGATTGGCTCCAATAGCTGAATAATCTGTATCCAGGTCAGGTGAGGCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS-3UTR CAA 90 bp GCCAGGCATTGTTCTGAGATGTTTACGTGCATAATTTCACTTAATCTTCATGAGTTCCTGGATTTGAGTTaGAAACTTCCAGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: ARHCSEMFTCIISLNLHEFLDLS*KLPGSR
Trigger: TCTGCTTCCTGGAAGTTTCAAACTCAAATCCAGGAA...CTCATGAAGATTAAGTGAAATTATGCACGTAAACATCTCAGAACAATGCCTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000441564.7
CDS CCA 90 bp CCTTCATTTAATTTTAAAGAGGCAGGATTTAACCCCAAGTCTGTCTaGCTTAAACACAATATAATGGGACCCATTAATGGCAACCATGGA +
Preference number: 5 (lower is better)
Translates to: PSFNFKEAGFNPKSV*LKHNIMGPINGNHG
Trigger: TCCATGGTTGCCATTAATGGGTCCCATTATATTGTGTTTAAGCCAGACAGACTTGGGGTTAAATCCTGCCTCTTTAAAATTAAATGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418251.6
ENST00000485525.5
CDS CCA 72 bp GTACCAGGGAGCTCTGGGCGGGGCCCACGGGCAGGATaGGCCGCACGAATCTGCGCTGGGAGCCCACAGCGG +
Preference number: 6 (lower is better)
Translates to: VPGSSGRGPRAG*AARICAGSPQR
Trigger: CCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCCCCGCCCAGAGCTCCCTGGTAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS GCA 72 bp TCCAGGCAGTTCTCGTGGGATCGATGCTGCTCCTCCTaGGAGCAGCGGGCGGTGAGGGGCGCTGTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: SRQFSWDRCCSS*EQRAVRGAVPG
Trigger: GCCCGGGACAGCGCCCCTCACCGCCCGCTGCTCGCAGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS GCA 72 bp GCGGCAGCGTCCAGGCAGTTCTCGTGGGATCGATGCTaGTCCTCCTGCGAGCAGCGGGCGGTGAGGGGCGCT +
Preference number: 6 (lower is better)
Translates to: AAASRQFSWDRC*SSCEQRAVRGA
Trigger: AGCGCCCCTCACCGCCCGCTGCTCGCAGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS GCA 72 bp TCCGCGGCAGCGTCCAGGCAGTTCTCGTGGGATCGATaGTGCTCCTCCTGCGAGCAGCGGGCGGTGAGGGGC +
Preference number: 6 (lower is better)
Translates to: SAAASRQFSWDR*CSSCEQRAVRG
Trigger: GCCCCTCACCGCCCGCTGCTCGCAGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS CCA 72 bp AGCAGGTCGTCCGCGGCAGCGTCCAGGCAGTTCTCGTaGGATCGATGCTGCTCCTCCTGCGAGCAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: SRSSAAASRQFS*DRCCSSCEQRA
Trigger: CGCCCGCTGCTCGCAGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGACGACCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464559.1
CDS CCA 72 bp AGCAGGTCGTCCGCGGCAGCGTCCAGGCAGTTCTCGTaGGATCGATGCTGCTCCTCGGTGCCTGGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: SRSSAAASRQFS*DRCCSSVPGRG
Trigger: ACCTCTTCCAGGCACCGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGACGACCTGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409378.1
CDS GCA 72 bp CCTGTCCTCAACGCGGGCTGTCTCTCTGCACACCTGTaGATGCATCGGCACAGGTCCCTGAGCAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: PVLNAGCLSAHL*MHRHRSLSRAA
Trigger: AGCAGCCCTGCTCAGGGACCTGTGCCGATGCATGCACAGGTGTGCAGAGAGACAGCCCGCGTTGAGGACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 72 bp GGGCCTGCAGGATGCCTGCCCAGAACACTACCTGTGTaGACGTGCTCCGGTTCTGCTTTGGGCTCCCCGGTA +
Preference number: 6 (lower is better)
Translates to: GPAGCLPRTLPV*TCSGSALGSPV
Trigger: TACCGGGGAGCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCTGGGCAGGCATCCTGCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS TCA 72 bp AGGAGGTGCTGCAGGAGCCCCCTCAGCGGCAGCCACTaGGGCCCAGCAGATGGAGTGTGGTTTATAGATGGG +
Preference number: 6 (lower is better)
Translates to: RRCCRSPLSGSH*GPADGVWFIDG
Trigger: CCCATCTATAAACCACACTCCATCTGCTGGGCCTCAGTGGCTGCCGCTGAGGGGGCTCCTGCAGCACCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
CDS GCA 72 bp TTCACTGGTGACCCTGGTGATGCTGTGTTCTGCCTGTaGTCCCTCTGGGCAGAGGGGCTCCCCAGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: FTGDPGDAVFCL*SLWAEGLPRCV
Trigger: CACACACCTGGGGAGCCCCTCTGCCCAGAGGGAGCACAGGCAGAACACAGCATCACCAGGGTCACCAGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS GCA 72 bp GCAGGATGCCTGCCCAGAACACTACCTGTGTGGACGTaGTCCGGTTCTGCTTTGGGCTCCCCGGTAGATGGC +
Preference number: 6 (lower is better)
Translates to: AGCLPRTLPVWT*SGSALGSPVDG
Trigger: GCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCTGGGCAGGCATCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS CCA 72 bp GTGCCCCGGAGCATCTGCTTTCACGGTCTCACTGTGTaGACTAGGGGGAGCACTGGCCGCTGGAGAAACTGG +
Preference number: 6 (lower is better)
Translates to: VPRSICFHGLTV*TRGSTGRWRNW
Trigger: CCAGTTTCTCCAGCGGCCAGTGCTCCCCCTAGTCCACACAGTGAGACCGTGAAAGCAGATGCTCCGGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS CAA 72 bp TCCCTGAGCAGGGCTGCTCCCAGCACGCCACCCTGTTaGTGGGCAGCAGACACTCACTCTTCTTGCCGTCTG +
Preference number: 6 (lower is better)
Translates to: SLSRAAPSTPPC*WAADTHSSCRL
Trigger: CAGACGGCAAGAAGAGTGAGTGTCTGCTGCCCACAAACAGGGTGGCGTGCTGGGAGCAGCCCTGCTCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CAA 90 bp CGGCACAGGTCCCTGAGCAGGGCTGCTCCCAGCACGCCACCCTGTTaGTGGGCAGCAGACACTCACTCTTCTTGCCGTCTGCATCTTGAT +
Preference number: 6 (lower is better)
Translates to: RHRSLSRAAPSTPPC*WAADTHSSCRLHLD
Trigger: ATCAAGATGCAGACGGCAAGAAGAGTGAGTGTCTGCTGCCCACAAACAGGGTGGCGTGCTGGGAGCAGCCCTGCTCAGGGACCTGTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS TCA 72 bp CTGGGTGGGGCTCCAGGCTGTCTCCCAAGTACAGGTTaGGAATTTCCATGGGCTGGGGGTGGTCAGGGAGTC +
Preference number: 6 (lower is better)
Translates to: LGGAPGCLPSTG*EFPWAGGGQGV
Trigger: GACTCCCTGACCACCCCCAGCCCATGGAAATTCTCAACCTGTACTTGGGAGACAGCCTGGAGCCCCACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS GCA 72 bp CCTCCAGGTCTAGGACACACATCTGGGCCTGCAGGATaGCTGCCCAGAACACTACCTGTGTGGACGTGCTCC +
Preference number: 6 (lower is better)
Translates to: PPGLGHTSGPAG*LPRTLPVWTCS
Trigger: GGAGCACGTCCACACAGGTAGTGTTCTGGGCAGGCATCCTGCAGGCCCAGATGTGTGTCCTAGACCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS GCA 72 bp GGCAAAGTTGGCCAAGGATGGGGAGGAAGTAGGCGATaGCTGGGCTTCATCCCTGGTCCCCAGCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: GKVGQGWGGSRR*LGFIPGPQLLF
Trigger: GAAGAGGAGCTGGGGACCAGGGATGAAGCCCAGGCATCGCCTACTTCCTCCCCATCCTTGGCCAACTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487574.1
CDS CCA 72 bp CAGGTTTGCTCCTCGAAAGGCTCCGGTGGATCCTCATaGCTGCACGTTTCCCTTGGGCACTCTCCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: QVCSSKGSGGSS*LHVSLGHSPGW
Trigger: CCACCCAGGAGAGTGCCCAAGGGAAACGTGCAGCCATGAGGATCCACCGGAGCCTTTCGAGGAGCAAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS CCA 72 bp GAGCCCCCTCAGCGGCAGCCACTGAGGCCCAGCAGATaGAGTGTGGTTTATAGATGGGCACAGGGAATGGAG +
Preference number: 6 (lower is better)
Translates to: EPPQRQPLRPSR*SVVYRWAQGME
Trigger: CTCCATTCCCTGTGCCCATCTATAAACCACACTCCATCTGCTGGGCCTCAGTGGCTGCCGCTGAGGGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
CDS CCA 72 bp CTGAGCAGGGCTGCTCCCAGCACGCCACCCTGTTTGTaGGCAGCAGACACTCACTCTTCTTGCCGTCTGCAT +
Preference number: 6 (lower is better)
Translates to: LSRAAPSTPPCL*AADTHSSCRLH
Trigger: ATGCAGACGGCAAGAAGAGTGAGTGTCTGCTGCCCACAAACAGGGTGGCGTGCTGGGAGCAGCCCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 72 bp CTCCCTCCAAAGGACCCAAGAATGGATGGCTTGGCCTaGGCTCCCCAAGAGCACTTCCTGGCTCACAGTCGG +
Preference number: 6 (lower is better)
Translates to: LPPKDPRMDGLA*APQEHFLAHSR
Trigger: CCGACTGTGAGCCAGGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485525.5
CDS CAA 72 bp CCTGGGTGGGGCTCCAGGCTGTCTCCCAAGTACAGGTaGAGAATTTCCATGGGCTGGGGGTGGTCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: PGWGSRLSPKYR*RISMGWGWSGS
Trigger: ACTCCCTGACCACCCCCAGCCCATGGAAATTCTCAACCTGTACTTGGGAGACAGCCTGGAGCCCCACCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS GCA 72 bp TGTTCAGTACGCACTGAGGAAGGAACATGGGCTGGCTaGCTGTCCTCAACGCGGGCTGTCTCTCTGCACACC +
Preference number: 6 (lower is better)
Translates to: CSVRTEEGTWAG*LSSTRAVSLHT
Trigger: GGTGTGCAGAGAGACAGCCCGCGTTGAGGACAGGCAGCCAGCCCATGTTCCTTCCTCAGTGCGTACTGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 72 bp TACCCTCCAAAGGACCCAAGAATGGATGGCTTGGCCTaGGCTCCCCAAGAGCACTTCCTGGCTCACAGTCGG +
Preference number: 6 (lower is better)
Translates to: YPPKDPRMDGLA*APQEHFLAHSR
Trigger: CCGACTGTGAGCCAGGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000418251.6
CDS CCA 72 bp GACGTGCTCCGGTTCTGCTTTGGGCTCCCCGGTAGATaGCTGTTCACTGGTGACCCTGGTGATGCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: DVLRFCFGLPGR*LFTGDPGDAVF
Trigger: GAACACAGCATCACCAGGGTCACCAGTGAACAGCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS CCA 72 bp CCAGGTCAATGCTTCGTCCACACACGGTGCTGCAGATaGAGCAGGACCAAGCCTATCTCCCTCACTCTCCCC +
Preference number: 6 (lower is better)
Translates to: PGQCFVHTRCCR*SRTKPISLTLP
Trigger: GGGGAGAGTGAGGGAGATAGGCTTGGTCCTGCTCCATCTGCAGCACCGTGTGTGGACGAAGCATTGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
CDS CAA 90 bp CAGGACCAAGCCTATCTCCCTCCAAAGGACCCAAGAATGGATGGCTaGGCCTGGGCTCCCCAAGAGCACTTCCTGGCTCACAGTCGGCTT +
Preference number: 6 (lower is better)
Translates to: QDQAYLPPKDPRMDG*AWAPQEHFLAHSRL
Trigger: AAGCCGACTGTGAGCCAGGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGAGATAGGCTTGGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485525.5
CDS TCA 72 bp TCTCTGAGCAAGGACTCGCCAGGAAGAGGGGGTTGCTaGAGAACATGCTCTCCTCCTCAGCTCCCCACTGTG +
Preference number: 6 (lower is better)
Translates to: SLSKDSPGRGGC*RTCSPPQLPTV
Trigger: CACAGTGGGGAGCTGAGGAGGAGAGCATGTTCTTCAGCAACCCCCTCTTCCTGGCGAGTCCTTGCTCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
CDS GCA 72 bp CACCAGCATCCAGACACACTCAGACACACGCAAGTGTaGATATGCCCCCTGTCCCTCACACCACCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: HQHPDTLRHTQV*ICPLSLTPPPV
Trigger: GACTGGAGGTGGTGTGAGGGACAGGGGGCATATGCACACTTGCGTGTGTCTGAGTGTGTCTGGATGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460725.5
ENST00000465592.1
CDS CCA 72 bp CATGGTCACTGTTCAGTACGCACTGAGGAAGGAACATaGGCTGGCTGCCTGTCCTCAACGCGGGCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: HGHCSVRTEEGT*AGCLSSTRAVS
Trigger: AGAGACAGCCCGCGTTGAGGACAGGCAGCCAGCCCATGTTCCTTCCTCAGTGCGTACTGAACAGTGACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 72 bp CCTATCTCCCTCCAAAGGACCCAAGAATGGATGGCTTaGCCTGGGCTCCCCAAGAGCACTTCCTGGCTCACA +
Preference number: 6 (lower is better)
Translates to: PISLQRTQEWMA*PGLPKSTSWLT
Trigger: TGTGAGCCAGGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGAGATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485525.5
CDS CCA 72 bp AGGACCAAGCCTATCTCCCTCCAAAGGACCCAAGAATaGATGGCTTGGCCTGGGCTCCCCAAGAGCACTTCC +
Preference number: 6 (lower is better)
Translates to: RTKPISLQRTQE*MAWPGLPKSTS
Trigger: GGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGAGATAGGCTTGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485525.5
CDS CCA 72 bp CCAGGTCAATGCTTCGTCCACACACGGTGCTGCAGATaGAGCAGGACCAAGCCTATCTCCCTCCAAAGGACC +
Preference number: 6 (lower is better)
Translates to: PGQCFVHTRCCR*SRTKPISLQRT
Trigger: GGTCCTTTGGAGGGAGATAGGCTTGGTCCTGCTCCATCTGCAGCACCGTGTGTGGACGAAGCATTGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485525.5
CDS GCA 72 bp GAGTCTGTAGTCACCCATCATCCACTGAGCAAAAGCTaGCCAGGAGTGCCCCGGAGCATCTGCTTTCACGGT +
Preference number: 6 (lower is better)
Translates to: ESVVTHHPLSKS*PGVPRSICFHG
Trigger: ACCGTGAAAGCAGATGCTCCGGGGCACTCCTGGGCAGCTTTTGCTCAGTGGATGATGGGTGACTACAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
ENST00000465917.1
CDS GCA 72 bp CAGTCACAGGGGCTCAGAGAAGAGGTTATCATCAGCTaGCCACCCTCCAGACTGTTCTGGGCCTCTCTCAGT +
Preference number: 6 (lower is better)
Translates to: QSQGLREEVIIS*PPSRLFWASLS
Trigger: ACTGAGAGAGGCCCAGAACAGTCTGGAGGGTGGGCAGCTGATGATAACCTCTTCTCTGAGCCCCTGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460725.5
CDS TCA 72 bp ACAGCATCCAGCACATGGTCACTGTTCAGTACGCACTaGGGAAGGAACATGGGCTGGCTGCCTGTCCTCAAC +
Preference number: 6 (lower is better)
Translates to: TASSTWSLFSTH*GRNMGWLPVLN
Trigger: GTTGAGGACAGGCAGCCAGCCCATGTTCCTTCCTCAGTGCGTACTGAACAGTGACCATGTGCTGGATGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 72 bp ATATCTACCCTCCAAAGGACCCAAGAATGGATGGCTTaGCCTGGGCTCCCCAAGAGCACTTCCTGGCTCACA +
Preference number: 6 (lower is better)
Translates to: ISTLQRTQEWMA*PGLPKSTSWLT
Trigger: TGTGAGCCAGGAAGTGCTCTTGGGGAGCCCAGGCCAAGCCATCCATTCTTGGGTCCTTTGGAGGGTAGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245796.11
ENST00000418251.6
CDS CCA 72 bp GCAGATGGAGTGTGGTTTATAGATGGGCACAGGGAATaGAGGGGTACAATGCCCACTGATAGCAGCGCCGTC +
Preference number: 6 (lower is better)
Translates to: ADGVWFIDGHRE*RGTMPTDSSAV
Trigger: GACGGCGCTGCTATCAGTGGGCATTGTACCCCTCCATTCCCTGTGCCCATCTATAAACCACACTCCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245796.11
ENST00000418251.6
ENST00000441564.7
CDS CCA 72 bp GAAAAGGCATACTGTGCTGGCAAAGTTGGCCAAGGATaGGGAGGAAGTAGGCGATGCCTGGGCTTCATCCCT +
Preference number: 6 (lower is better)
Translates to: EKAYCAGKVGQG*GGSRRCLGFIP
Trigger: AGGGATGAAGCCCAGGCATCGCCTACTTCCTCCCCATCCTTGGCCAACTTTGCCAGCACAGTATGCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487574.1
CDS CAA 72 bp CAGGGACTCTGGGGCCCAGGAATAACTAGGCCTGTTTaGTCTGGGTTCTCCTACCTACCCTCTAGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: QGLWGPGITRPV*SGFSYLPSSAS
Trigger: TGAGGCACTAGAGGGTAGGTAGGAGAACCCAGACAAAACAGGCCTAGTTATTCCTGGGCCCCAGAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CAA 72 bp CCACTGACAAGGAAAAGGCATACTGTGCTGGCAAAGTaGGCCAAGGATGGGGAGGAAGTAGGCGATGCCTGG +
Preference number: 6 (lower is better)
Translates to: PLTRKRHTVLAK*AKDGEEVGDAW
Trigger: CCAGGCATCGCCTACTTCCTCCCCATCCTTGGCCAACTTTGCCAGCACAGTATGCCTTTTCCTTGTCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487574.1
CDS CAA 90 bp GGCTTTATCCCACTGACAAGGAAAAGGCATACTGTGCTGGCAAAGTaGGCCAAGGATGGGGAGGAAGTAGGCGATGCCTGGGCTTCATCC +
Preference number: 6 (lower is better)
Translates to: GFIPLTRKRHTVLAK*AKDGEEVGDAWASS
Trigger: GGATGAAGCCCAGGCATCGCCTACTTCCTCCCCATCCTTGGCCAACTTTGCCAGCACAGTATGCCTTTTCCTTGTCAGTGGGATAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487574.1
CDS CAA 90 bp AGAACCATCCCTCGCAGTAAGGTGTGGAACATCTTCCAGCCACGCTaGCCCCATGGCGCTGTTCCAGGAACAGAACACAAATGTTGTAGG +
Preference number: 6 (lower is better)
Translates to: RTIPRSKVWNIFQPR*PHGAVPGTEHKCCR
Trigger: CCTACAACATTTGTGTTCTGTTCCTGGAACAGCGCCATGGGGCAAGCGTGGCTGGAAGATGTTCCACACCTTACTGCGAGGGATGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460725.5
ENST00000465592.1
CDS CAA 90 bp ACCTTACTACAGGGACTCTGGGGCCCAGGAATAACTAGGCCTGTTTaGTCTGGGTTCTCCTACCTACCCTCTAGTGCCTCACACAGCATC +
Preference number: 6 (lower is better)
Translates to: TLLQGLWGPGITRPV*SGFSYLPSSASHSI
Trigger: GATGCTGTGTGAGGCACTAGAGGGTAGGTAGGAGAACCCAGACAAAACAGGCCTAGTTATTCCTGGGCCCCAGAGTCCCTGTAGTAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 72 bp CACACTTGTCTAATCTCTACCTTACTACAGGGACTCTaGGGCCCAGGAATAACTAGGCCTGTTTTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: HTCLISTLLQGL*GPGITRPVLSG
Trigger: CCCAGACAAAACAGGCCTAGTTATTCCTGGGCCCCAGAGTCCCTGTAGTAAGGTAGAGATTAGACAAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493329.1
CDS CCA 72 bp ACATATAGAGTCTCTCCACACACAGGCAATGCCCGCTaGAAACAAAACCATAGAACCACTCACATCCAAATA +
Preference number: 6 (lower is better)
Translates to: TYRVSPHTGNAR*KQNHRTTHIQI
Trigger: TATTTGGATGTGAGTGGTTCTATGGTTTTGTTTCCAGCGGGCATTGCCTGTGTGTGGAGAGACTCTATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460725.5