RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000156011

Ensembl transcript IDs: ENST00000286485.12, ENST00000327040.13, ENST00000428502.6, ENST00000440756.4, ENST00000517971.5, ENST00000518303.5, ENST00000518315.5, ENST00000518963.5, ENST00000519633.1, ENST00000519653.5, ENST00000519851.5, ENST00000520789.1, ENST00000520858.5, ENST00000521475.1, ENST00000521841.1, ENST00000521878.1, ENST00000523619.5, ENST00000614430.3, ENST00000615573.4

Found 2079 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGTCCCAAGGCTCCTGGGCGCTGAGGTGGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAGGGAAGGGGTGCTCCCTTGTACCGT +
Preference number: 1 (lower is better)
Translates to: EVPRLLGAEVGDGGG*RTFRGKGRGAPLYR
Trigger: ACGGTACAAGGGAGCACCCCTTCCCTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 90 bp GCAGAGCAGTGGCATGGCCTGGGAGACAAGATGGCCAGAAAGCTGTaGAGCAAGGTAGGAGGCCCAGAGGCGCATCTGCCTGCAAAGCTG +
Preference number: 1 (lower is better)
Translates to: AEQWHGLGDKMARKL*SKVGGPEAHLPAKL
Trigger: CAGCTTTGCAGGCAGATGCGCCTCTGGGCCTCCTACCTTGCTCCACAGCTTTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 90 bp GAGCAAGCAGCTCTGCCACCTTGGAAAATGATGCACACCAGCTTCTaGGACTTCACCCAGGCTACGGAGAGATGCTGGAGAGCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: EQAALPPWKMMHTSF*DFTQATERCWRAAA
Trigger: AGCAGCAGCTCTCCAGCATCTCTCCGTAGCCTGGGTGAAGTCCCAGAAGCTGGTGTGCATCATTTTCCAAGGTGGCAGAGCTGCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 90 bp CAGGGTCACGCTATCAGGACACCTGGATCCCTAAAGCAGGGGAAGTaGCATTTGAAACCCAGGCTGTCCTTGCTGCTCAGTAGAAGCCTG +
Preference number: 1 (lower is better)
Translates to: QGHAIRTPGSLKQGK*HLKPRLSLLLSRSL
Trigger: CAGGCTTCTACTGAGCAGCAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCTGCTTTAGGGATCCAGGTGTCCTGATAGCGTGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 90 bp GTGGCGTACCTTCAGAGGAAAGGGAAGGGGTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGGAGCAGCTGTGAAAGGAAACATCCT +
Preference number: 1 (lower is better)
Translates to: VAYLQRKGKGCSLVP*IGQQAWSSCERKHP
Trigger: AGGATGTTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCCCTTTCCTCTGAAGGTACGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 90 bp AGAGCAGTGAGCCTCAGACCTGCAGTGTGGTCCTTAATCGAGCCTTaGGCTGGGACTCTTCTAGGAGCGCCTGAAGACTTATTTATGGCG +
Preference number: 1 (lower is better)
Translates to: RAVSLRPAVWSLIEP*AGTLLGAPEDLFMA
Trigger: CGCCATAAATAAGTCTTCAGGCGCTCCTAGAAGAGTCCCAGCCCAAGGCTCGATTAAGGACCACACTGCAGGTCTGAGGCTCACTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 90 bp CAGTTGCTCCTCCTGAGACAGTTTTGTTGTAGTGGCAGGCAGAAGTaGGCGGCTAAACTTCTTCTGAGAGCCGATTGCTGCTGGAAATGG +
Preference number: 1 (lower is better)
Translates to: QLLLLRQFCCSGRQK*AAKLLLRADCCWKW
Trigger: CCATTTCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCGCCCACTTCTGCCTGCCACTACAACAAAACTGTCTCAGGAGGAGCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR GCA 90 bp AGTGGCAGGCAGAAGTGGGCGGCTAAACTTCTTCTGAGAGCCGATTaGTGCTGGAAATGGTGGTGCAGAAAATACAGCTGCCACACAATT +
Preference number: 1 (lower is better)
Translates to: SGRQKWAAKLLLRAD*CWKWWCRKYSCHTI
Trigger: AATTGTGTGGCAGCTGTATTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCGCCCACTTCTGCCTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CCA 90 bp GCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTaGAAAACATCTGTGATGCAGTTTCCACCCCCTCTGTTCATCACC +
Preference number: 1 (lower is better)
Translates to: ASQSQTLELRFHPGP*KTSVMQFPPPLFIT
Trigger: GGTGATGAACAGAGGGGGTGGAAACTGCATCACAGATGTTTTCCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTaGACAAGGCACATCAGTGCTCCTACAGGAAGTGCCTCCTTGTTT +
Preference number: 1 (lower is better)
Translates to: MFSRSSLTSKAQRGV*TRHISAPTGSASLF
Trigger: AAACAAGGAGGCACTTCCTGTAGGAGCACTGATGTGCCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 90 bp GCTTCCAGCAGGGTCCGATCTCAACAACAAGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAGCAACTAGATTCCCAGCACTGTGAT +
Preference number: 1 (lower is better)
Translates to: ASSRVRSQQQVLSCT*SCLILEQLDSQHCD
Trigger: ATCACAGTGCTGGGAATCTAGTTGCTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCACTTGTTGTTGAGATCGGACCCTGCTGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 90 bp TCAGTGACTGTTTCCTCCCATAGCATAAACTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAACCTTCAGAAGCCTCAGGGAAGAGG +
Preference number: 1 (lower is better)
Translates to: SVTVSSHSINSWPPS*THDRQQPSEASGKR
Trigger: CCTCTTCCCTGAGGCTTCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATGGGAGGAAACAGTCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 90 bp AGTTTTGTTGTAGTGGCAGGCAGAAGTGGGCGGCTAAACTTCTTCTaGGAGCCGATTGCTGCTGGAAATGGTGGTGCAGAAAATACAGCT +
Preference number: 1 (lower is better)
Translates to: SFVVVAGRSGRLNFF*EPIAAGNGGAENTA
Trigger: AGCTGTATTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCGCCCACTTCTGCCTGCCACTACAACAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR GCA 90 bp GCCTCCTTGTTTCTTCACTTGTACTCCTCTCTCAAAGGAATGATCTaGAGAGCAAGCAGCTCTGCCACCTTGGAAAATGATGCACACCAG +
Preference number: 1 (lower is better)
Translates to: ASLFLHLYSSLKGMI*RASSSATLENDAHQ
Trigger: CTGGTGTGCATCATTTTCCAAGGTGGCAGAGCTGCTTGCTCTGCAGATCATTCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR GCA 90 bp TCAGAGGGGAGTGTGGACAAGGCACATCAGTGCTCCTACAGGAAGTaGCTCCTTGTTTCTTCACTTGTACTCCTCTCTCAAAGGAATGAT +
Preference number: 1 (lower is better)
Translates to: SEGSVDKAHQCSYRK*LLVSSLVLLSQRND
Trigger: ATCATTCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGTAGGAGCACTGATGTGCCTTGTCCACACTCCCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 90 bp CATGTAAGATGCTATAAGACTGGTGGAAAGAAATTTGCTGACATGTaGCAGAGCAGTGGCATGGCCTGGGAGACAAGATGGCCAGAAAGC +
Preference number: 1 (lower is better)
Translates to: HVRCYKTGGKKFADM*QSSGMAWETRWPES
Trigger: GCTTTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCACCAGTCTTATAGCATCTTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 90 bp GAAGTGCCTCCTTGTTTCTTCACTTGTACTCCTCTCTCAAAGGAATaGTCTGCAGAGCAAGCAGCTCTGCCACCTTGGAAAATGATGCAC +
Preference number: 1 (lower is better)
Translates to: EVPPCFFTCTPLSKE*SAEQAALPPWKMMH
Trigger: GTGCATCATTTTCCAAGGTGGCAGAGCTGCTTGCTCTGCAGATCATTCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGAGGCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR GCA 90 bp TCCATTTCCATCCTCGCTGTTGTTGCTGATGGAAAAGTGCTCAACTaGTCAGCATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGA +
Preference number: 1 (lower is better)
Translates to: SISILAVVADGKVLN*SACSVGALLPVKLR
Trigger: TCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACATGCTGAGCAGTTGAGCACTTTTCCATCAGCAACAACAGCGAGGATGGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR GCA 90 bp AAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAA +
Preference number: 1 (lower is better)
Translates to: KHVWFLLIVRGLGCQ*VVHTHSVFQVLFRQ
Trigger: TTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACGGACTATGAGAAGAAACCAAACGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR TCA 90 bp CATTTTAGTTCGGTTCCTTTCCATTTCCATCCTCGCTGTTGTTGCTaGTGGAAAAGTGCTCAACTGCTCAGCATGTTCAGTCGGAGCTCT +
Preference number: 1 (lower is better)
Translates to: HFSSVPFHFHPRCCC*WKSAQLLSMFSRSS
Trigger: AGAGCTCCGACTGAACATGCTGAGCAGTTGAGCACTTTTCCATCAGCAACAACAGCGAGGATGGAAATGGAAAGGAACCGAACTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 90 bp TTTTTGCTTAATGCTTGGTGTTTCAGGTCGGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTTGGCAGTGATTGGAGAAGTATCCGG +
Preference number: 1 (lower is better)
Translates to: FLLNAWCFRSVILPL*HVTLDFGSDWRSIR
Trigger: CCGGATACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCACCGACCTGAAACACCAAGCATTAAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR GCA 90 bp GACAGTCAACTGGTTCTGAATCTCAGGAGGAGAGGACTAACCACATaGATGGTTACCCTAAATGGAAAGCAACCACTTTACTGTCCCCTA +
Preference number: 1 (lower is better)
Translates to: DSQLVLNLRRRGLTT*MVTLNGKQPLYCPL
Trigger: TAGGGGACAGTAAAGTGGTTGCTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAGAACCAGTTGACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR GCA 90 bp AAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTGGATaGCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTC +
Preference number: 1 (lower is better)
Translates to: KFKHVWFLLIVRGLG*QCVVHTHSVFQVLF
Trigger: GAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CCA 90 bp AATCTAGGCAAATCAGTGACTGTTTCCTCCCATAGCATAAACTCTTaGCCTCCTTCATGCACTCATGACAGACAGCAACCTTCAGAAGCC +
Preference number: 1 (lower is better)
Translates to: NLGKSVTVSSHSINS*PPSCTHDRQQPSEA
Trigger: GGCTTCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATGGGAGGAAACAGTCACTGATTTGCCTAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 90 bp GCATGCAATGGGCCAATTATTGTCATAAGCAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGTACAAAAGGAGAATGCCTTTGGATT +
Preference number: 1 (lower is better)
Translates to: ACNGPIIVISRRLPT*VLDTVGTKGECLWI
Trigger: AATCCAAAGGCATTCTCCTTTTGTACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCTGCTTATGACAATAATTGGCCCATTGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 90 bp AGGCTGCCCACGTGGGTTCTGGATACTGTAGGTACAAAAGGAGAATaGCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAA +
Preference number: 1 (lower is better)
Translates to: RLPTWVLDTVGTKGE*LWISVLPLWMRDGK
Trigger: TTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTTTGTACCTACAGTATCCAGAACCCACGTGGGCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 90 bp CCTGGTCCTGAAATTCTTTTACCTGTGACACTAGATGCTAATTTCTaGAACTGCAAACCTAGGATACAGTACCCAATCCTGGGATGCCCT +
Preference number: 1 (lower is better)
Translates to: PGPEILLPVTLDANF*NCKPRIQYPILGCP
Trigger: AGGGCATCCCAGGATTGGGTACTGTATCCTAGGTTTGCAGTTGCAGAAATTAGCATCTAGTGTCACAGGTAAAAGAATTTCAGGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 90 bp GAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATaGAAAGCAACCACTTTACTGTCCCCTAAGCTTCAATTTGGTCTA +
Preference number: 1 (lower is better)
Translates to: ESQEERTNHMHGYPK*KATTLLSPKLQFGL
Trigger: TAGACCAAATTGAAGCTTAGGGGACAGTAAAGTGGTTGCTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 90 bp TGCTGGTTGCAAAAATTCTTCCACAATCTCAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCA +
Preference number: 1 (lower is better)
Translates to: CWLQKFFHNLRSSVA*PQGEIQTYLSLGKP
Trigger: TGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCTGAGATTGTGGAAGAATTTTTGCAACCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 90 bp TGTGATTCTTACTGGAGCATCTGTGAGTGCTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACATATAAAGGCGTATATTAACTCCAGC +
Preference number: 1 (lower is better)
Translates to: CDSYWSICECSILPL*LGKISHIKAYINSS
Trigger: GCTGGAGTTAATATACGCCTTTATATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGAGCACTCACAGATGCTCCAGTAAGAATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 90 bp ACTACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATaGTATTCCTGTAGAGCAGCTGATTCTTTGGTCATAGTACCTTCA +
Preference number: 1 (lower is better)
Translates to: TTMALQQVFSNSLEP*YSCRAADSLVIVPS
Trigger: TGAAGGTACTATGACCAAAGAATCAGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 90 bp CCCACAAATACAACAATGGCAGGTGACAGCATTTTCTTTGATGACTaGCATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCAATACTA +
Preference number: 1 (lower is better)
Translates to: PTNTTMAGDSIFFDD*HTACKNSLQKPAIL
Trigger: TAGTATTGCAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCACCTGCCATTGTTGTATTTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 90 bp ATGCTAATTTCTGCAACTGCAAACCTAGGATACAGTACCCAATCCTaGGATGCCCTGATATACTTTAGTGCTTGTGATATTTCTTCCAAG +
Preference number: 1 (lower is better)
Translates to: MLISATANLGYSTQS*DALIYFSACDISSK
Trigger: CTTGGAAGAAATATCACAAGCACTAAAGTATATCAGGGCATCCCAGGATTGGGTACTGTATCCTAGGTTTGCAGTTGCAGAAATTAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 90 bp ACTTTTGTACACAGCAGCATTTGGATCATGAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAATACGACTGATGGTCTTTGGATGTGT +
Preference number: 1 (lower is better)
Translates to: TFVHSSIWIMRNVQK*VSSTSNTTDGLWMC
Trigger: ACACATCCAAAGACCATCAGTCGTATTGGAAGTACTACTAACCCATTTTTGGACATTCCTCATGATCCAAATGCTGCTGTGTACAAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR TCA 90 bp GCTTGTGGATATGTTGGATTCAGTGAGAGGCTACAAAAATCAATCTaGTACATGGGCCATATTGGTAACTATCCTGTTTGTTTTGCAGTT +
Preference number: 1 (lower is better)
Translates to: ACGYVGFSERLQKSI*YMGHIGNYPVCFAV
Trigger: AACTGCAAAACAAACAGGATAGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATCCAACATATCCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 90 bp AGATACAAATTATCGCCTTTCTGCCTGTCCTATGGTAATCAAGGCTaGCAATATAAATTCTCCGCTAGTGTACATTTAGAAATGGGTTCC +
Preference number: 1 (lower is better)
Translates to: RYKLSPFCLSYGNQG*QYKFSASVHLEMGS
Trigger: GGAACCCATTTCTAAATGTACACTAGCGGAGAATTTATATTGTCAGCCTTGATTACCATAGGACAGGCAGAAAGGCGATAATTTGTATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp GGATCCCTAAAGCAGGGGAAGTGGCATTTGAAACCCAGGCTGTCCTaGCTGCTCAGTAGAAGCCTGAGTGAAGTGGCGGCCGGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: GSLKQGKWHLKPRLS*LLSRSLSEVAAGGE
Trigger: CTCTCCCCCGGCCGCCACTTCACTCAGGCTTCTACTGAGCAGCAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCTGCTTTAGGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSSWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp TCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTaGCCTCAGCAGGGTCACGCTATCAGGACACCTGGATCCCTAAAG +
Preference number: 2 (lower is better)
Translates to: SCATLSDSVTLGVDT*PQQGHAIRTPGSLK
Trigger: CTTTAGGGATCCAGGTGTCCTGATAGCGTGACCCTGCTGAGGCAAGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSGDGGG*RTFRGK
Trigger: CTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCC...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp CACGCTATCAGGACACCTGGATCCCTAAAGCAGGGGAAGTGGCATTaGAAACCCAGGCTGTCCTTGCTGCTCAGTAGAAGCCTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: HAIRTPGSLKQGKWH*KPRLSLLLSRSLSE
Trigger: TTCACTCAGGCTTCTACTGAGCAGCAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCTGCTTTAGGGATCCAGGTGTCCTGATAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTaGATACCTTGCCTCAGCAGGGTCACGCTATCAGGACACCTGGAT +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSE*IPCLSRVTLSGHLD
Trigger: ATCCAGGTGTCCTGATAGCGTGACCCTGCTGAGGCAAGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVTIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQTIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATCAAGCGAGTACGGATaGGGCACCACGAGAGTGGTT +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTESSEYG*GTTRVV
Trigger: AACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp TCTGACACGTTACGCTTGACTTTGGCAGTGATTGGAGAAGTATCCGGGTTCAGCGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGC +
Preference number: 2 (lower is better)
Translates to: SDTLRLTLAVIGEVSGFSGLGCQ*VVHTHS
Trigger: GCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCC...GCTGAACCCGGATACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR GCA 90 bp GGCAGTGATTGGAGAAGTATCCGGGTTCAGCGAAGGACTCGAGTGCGACTTCTTCTTCTGAGAGCCGATTaGTGCTGGAAATGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: GSDWRSIRVQRRTRVRLLLLRAD*CWKWWC
Trigger: GCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAG...AAGAAGTCGCACTCGAGTCCTTCGCTGAACCCGGATACTTCTCCAATCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDGDGGG*RTFRGK
Trigger: CTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp CGTACCTTCAGAGGAAAGGGAAGGGGTGCTCCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCAGCTGTGAAAGGAAACATCCTCAAT +
Preference number: 2 (lower is better)
Translates to: RTFRGKGRGAPLYRE*GNRLGAAVKGNILN
Trigger: ATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCCCTTTCCTCTGAAGGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTAAAGAGTGCAGCTCATaGCAAGCAGGCCCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFKECSS*QAGPAS
Trigger: AGAGGCAGGGCCTGCTTGTCATGAGCTGCACTCTTT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAGACTCACTGCTGAAATaGAGAGAGGTGGCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEDSLLK*REVAPN
Trigger: GTTGGGAGCCACCTCTCTTCATTTCAGCAGTGAGTC...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAGGGATGACTCACTGCTaGAATGAAGAGAGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEGMTHC*NEERWL
Trigger: GAGCCACCTCTCTTCATTTCAGCAGTGAGTCATCCC...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTCAGGACTCAGAGCAGTaGGCCTCAGACCTGCAGTGT +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQAQDSEQ*ASDLQC
Trigger: ACACTGCAGGTCTGAGGCTCACTGCTCTGAGTCCTG...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATCCTCATGTCACTTTTaGCCAGGGGCCAGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTESSCHF*PGASPH
Trigger: ATGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAGCAGCTCTGCCACCTTaGAAAATGATGCACACCAGC +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEAALPP*KMMHTS
Trigger: GCTGGTGTGCATCATTTTCCAAGGTGGCAGAGCTGC...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTGACTCACTGCTGAAATaGAGAGAGGTGGCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFDSLLK*REVAPN
Trigger: GTTGGGAGCCACCTCTCTTCATTTCAGCAGTGAGTC...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: ILKNPILLHDQHFLAADGCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGDGGG*RTFRGK
Trigger: CTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAGCAGTGGCATGGCCTaGGAGACAAGATGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQASSGMA*ETRWPE
Trigger: TTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTGCAGCTCTGCCACCTTaGAAAATGATGCACACCAGC +
Preference number: 2 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSAALPP*KMMHTS
Trigger: GCTGGTGTGCATCATTTTCCAAGGTGGCAGAGCTGC...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp TGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTaGGAAAACATCTGTGATGCAGTTTCCACCCCCTCTGTTCATCAC +
Preference number: 2 (lower is better)
Translates to: CISKSDTRAQIPPWP*ENICDAVSTPSVHH
Trigger: GTGATGAACAGAGGGGGTGGAAACTGCATCACAGATGTTTTCCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: ILKNPILLHDQHFLAADGTIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTTGCCACCTTGGAAAATaGTGCACACCAGCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVCHLGK*CTPASG
Trigger: CCCAGAAGCTGGTGTGCATCATTTTCCAAGGTGGCA...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGCACATGCCTACTGCTaGAGCTCCTCAAGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLAHAYC*SSSRAD
Trigger: ATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATGTGC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTESIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTESALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTTCCTCATGTCACTTTTaGCCAGGGGCCAGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVSSCHF*PGASPH
Trigger: ATGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGA...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGACAAGGCACATCAGTaGTCCTACAGGAAGTGCCTC +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQADKAHQ*SYRKCL
Trigger: GAGGCACTTCCTGTAGGAGCACTGATGTGCCTTGTC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGTAGCAGAGTGAAGTaGCTATCAAGGAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSSRVK*LSRRLR
Trigger: TCTCAGTCTCCTTGATAGCCACTTCACTCTGCTACT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAGCCAGCATGCGAGGTaGGGACAAACCCCTAAAATT +
Preference number: 2 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSSQHAR*GQTPKI
Trigger: AATTTTAGGGGTTTGTCCCCACCTCGCATGCTGGCT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTACATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp CGTGGCCTTGGATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCCTTTCCAATATTATCTaGGACAGGTCTACCTTCAGG +
Preference number: 2 (lower is better)
Translates to: RGLGCQCVVHTHSVFQVLLSNII*DRSTFR
Trigger: CCTGAAGGTAGACCTGTCCCAGATAATATTGGAAAG...GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CAA 90 bp AGGCACATCAGTGCTCCTACAGGAAGTGCCTCCTTGTTTCTTCACTaGTACTCCTCTCTCAAAGGAATGATCTGCAGAGCAAGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: RHISAPTGSASLFLH*YSSLKGMICRASSS
Trigger: AGAGCTGCTTGCTCTGCAGATCATTCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGTAGGAGCACTGATGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp GGAGTGTGGACAAGGCACATCAGTGCTCCTACAGGAAGTGCCTCCTaGTTTCTTCACTTGTACTCCTCTCTCAAAGGAATGATCTGCAGA +
Preference number: 2 (lower is better)
Translates to: GVWTRHISAPTGSAS*FLHLYSSLKGMICR
Trigger: TCTGCAGATCATTCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGTAGGAGCACTGATGTGCCTTGTCCACACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GTCGGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 2 (lower is better)
Translates to: VGSFKFKHVWFLLIVRGLPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...AAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQAVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 2 (lower is better)
Translates to: ILKNPILLHDQHFLAADGVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGCATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 2 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTGGAAAGAAATTTGCTaGCATGTGGCAGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPWKEIC*HVAEQW
Trigger: CCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCCTCTCTCAAAGGAATaGTCTGCAGAGCAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVPLSKE*SAEQAA
Trigger: AGCTGCTTGCTCTGCAGATCATTCCTTTGAGAGAGG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTCTTCTAGGAGCGCCTaGAGACTTATTTATGGCGAC +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPSSRSA*RLIYGD
Trigger: GTCGCCATAAATAAGTCTTCAGGCGCTCCTAGAAGA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GGCAGTGATTGGAGAAGTATCCGGGTTCAGCGAAGGACTCGAGTGCGACTTCTTTTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: GSDWRSIRVQRRTRVRLLFAMNS*QVIFFP
Trigger: TGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAA...AAGAAGTCGCACTCGAGTCCTTCGCTGAACCCGGATACTTCTCCAATCACTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGCACATGCCTACTGCTaGAGCTCCTCAAGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHAHAYC*SSSRAD
Trigger: ATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATGTGC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTATGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAATTCACTGGAACCATaGTATTCCTGTAGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQNSLEP*YSCRAA
Trigger: AGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQAGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPSALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGAGGGTCTTGTGTTTaGCACAAGACCACTGCACCA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDRGSCV*HKTTAP
Trigger: TGGTGCAGTGGTCTTGTGGCAAACACAAGACCCTCT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTATCAAGCGAGTACGGATaGGGCACCACGAGAGTGGTT +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLSSEYG*GTTRVV
Trigger: AACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGA...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATGCTCCTACAGGAAGTaGCTCCTTGTTTCTTCACTT +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTECSYRK*LLVSSL
Trigger: AAGTGAAGAAACAAGGAGGCACTTCCTGTAGGAGCA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAAAGGAAAATGTGGTTaGCTATGGGCCAGACTCTCA +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEKGKCG*LWARLS
Trigger: TGAGAGTCTGGCCCATAGCCAACCACATTTTCCTTT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGCCAGCATGCGAGGTaGGGACAAACCCCTAAAATT +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDSQHAR*GQTPKI
Trigger: AATTTTAGGGGTTTGTCCCCACCTCGCATGCTGGCT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGCTCAGATTCCACCCTaGCCCTTGGAAAACATCTGT +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQAAQIPP*PLENIC
Trigger: ACAGATGTTTTCCAAGGGCCAGGGTGGAATCTGAGC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp CGTGGCCTTGGATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 2 (lower is better)
Translates to: RGLGCQCVVHTHSVFQVLLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 2 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTCCTTCATGCACTCATaGCAGACAGCAACCTTCAGA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDSFMHS*QTATFR
Trigger: TCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGCACATGCCTACTGCTaGAGCTCCTCAAGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLAHAYC*SSSRAD
Trigger: ATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATGTGC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGCACATGCCTACTGCTaGAGCTCCTCAAGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIAHAYC*SSSRAD
Trigger: ATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATGTGC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFSWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAGAGGCGCATCTGCCTaGAAAGCTGACTTACCATTT +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQARGASA*KADLPF
Trigger: AAATGGTAAGTCAGCTTTGCAGGCAGATGCGCCTCT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTAGAGGCGCATCTGCCTaGAAAGCTGACTTACCATTT +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVRGASA*KADLPF
Trigger: AAATGGTAAGTCAGCTTTGCAGGCAGATGCGCCTCT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGACATTCTCTCTGCATaGAATGGGCCAATTATTGTC +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRDILSA*NGPIIV
Trigger: GACAATAATTGGCCCATTGCATGCAGAGAGAATGTC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCTATGCCCTTGGTATTaGACACAGTACACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRLCPWY*TQYTAK
Trigger: TTTTGCAGTGTACTGTGTGCAATACCAAGGGCATAG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTAATTACAGGGAGCTATaGCCTTGGTATTGCACACAG +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPNYREL*PWYCTQ
Trigger: CTGTGTGCAATACCAAGGGCATAGCTCCCTGTAATT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGAGAGGACTAACCACATaGATGGTTACCCTAAATGGA +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRRGLTT*MVTLNG
Trigger: TCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTAAGAGCTTAGCTCTCTaGCCTGCAAAGGGAAATGCA +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVKSLAL*PAKGNA
Trigger: TGCATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTELAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQAGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 2 (lower is better)
Translates to: YNASQSQTLELRFHPGPWGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATATTGGGCAACAGGCTTaGAGCAGCTGTGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDIGQQA*SSCERK
Trigger: TTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAAT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTACCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGACCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACAT +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFSILPL*LGKISH
Trigger: ATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHTIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCTIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCTACAAAAATCAATCTaGTACATGGGCCATATTGGT +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLQKSI*YMGHIG
Trigger: ACCAATATGGCCCATGTATCAGATTGATTTTTGTAG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGICSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACCACAAGAAAGAATGTaGTATGGATCCCCTCATTTA +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEPQERM*YGSPHL
Trigger: TAAATGAGGGGATCCATATCACATTCTTTCTTGTGG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTTCCTCTTTGCAGAGATaGTGTGTTATCACCACTCTC +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVSSLQR*CVITTL
Trigger: GAGAGTGGTGATAACACATCATCTCTGCAAAGAGGA...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GACTTCTTCAGTCCTGCAGCCTCGCTTTCATCGTTACTCAGTAGCTCTTTGCCTCAGCTGCCACACAATTaGTTTTGTTTATCCACCCTT +
Preference number: 2 (lower is better)
Translates to: DFFSPAASLSSLLSSSLPQLPHN*FCLSTL
Trigger: AAGGGTGGATAAACAAAATCAATTGTGTGGCAGCTG...AGGCAAAGAGCTACTGAGTAACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKSRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGCACATGCCTACTGCTaGAGCTCCTCAAGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRAHAYC*SSSRAD
Trigger: ATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATGTGC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGCACATGCCTACTGCTaGAGCTCCTCAAGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTAHAYC*SSSRAD
Trigger: ATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATGTGC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATCTTTCCCTGCTGGTTaGAAAAATTCTTCCACAATC +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTESFPAG*KNSSTI
Trigger: GATTGTGGAAGAATTTTTGCAACCAGCAGGGAAAGA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTCTATGCCCTTGGTATTaGACACAGTACACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSLCPWY*TQYTAK
Trigger: TTTTGCAGTGTACTGTGTGCAATACCAAGGGCATAG...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCTACCAACACATTACTaGAGCCTGGAGCTGAAGTTA +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVLPTHY*SLELKL
Trigger: TAACTTCAGCTCCAGGCTGCAGTAATGTGTTGGTAG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCACTGTGATTCTTACTaGAGCATCTGTGAGTGCTCA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDHCDSY*SICECS
Trigger: TGAGCACTCACAGATGCTCCAGTAAGAATCACAGTG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCACTGTGATTCTTACTaGAGCATCTGTGAGTGCTCA +
Preference number: 2 (lower is better)
Translates to: YNASQSQTLELRFHPGPWHCDSY*SICECS
Trigger: TGAGCACTCACAGATGCTCCAGTAAGAATCACAGTG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCACTGTGATTCTTACTaGAGCATCTGTGAGTGCTCA +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFHCDSY*SICECS
Trigger: TGAGCACTCACAGATGCTCCAGTAAGAATCACAGTG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTCTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSLAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 2 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGTAGCAGAGTGAAGTaGCTATCAAGGAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDSSRVK*LSRRLR
Trigger: TCTCAGTCTCCTTGATAGCCACTTCACTCTGCTACT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGTAGCAGAGTGAAGTaGCTATCAAGGAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFSSRVK*LSRRLR
Trigger: TCTCAGTCTCCTTGATAGCCACTTCACTCTGCTACT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 2 (lower is better)
Translates to: YNASQSQTLELRFHPGPWSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGGCAGTCTGAGATCCTaGCTCACAAAAGAACCTTTA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDGSLRS*LTKEPL
Trigger: TAAAGGTTCTTTTGTGAGCCAGGATCTCAGACTGCC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAAATGTGGTTGGCTATaGGCCAGACTCTCAGAATCT +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDKCGWL*ARLSES
Trigger: AGATTCTGAGAGTCTGGCCCATAGCCAACCACATTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCTTAGGATGCCACTTTaGTTCTTTGTTTTACAGTGC +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRLRMPL*FFVLQC
Trigger: GCACTGTAAAACAAAGAACCAAAGTGGCATCCTAAG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGATGGCCAGAAAGCTGTaGAGCAAGGTAGGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLMARKL*SKVGGP
Trigger: TGGGCCTCCTACCTTGCTCCACAGCTTTCTGGCCAT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGCAGTGGCATGGCCTaGGAGACAAGATGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSSGMA*ETRWPE
Trigger: TTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGCAGTGGCATGGCCTaGGAGACAAGATGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISSGMA*ETRWPE
Trigger: TTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCATGGTTACCCTAAATaGAAAGCAACCACTTTACTG +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRHGYPK*KATTLL
Trigger: CAGTAAAGTGGTTGCTTTCCATTTAGGGTAACCATG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GCCTCGCTTTCATCGTTACTCAGTAGCTCTTTGCCTCCTTCCTTGAGAATGCTGACGACTGATGGTCTTTaGATGTGTTCCGTTAGCTTT +
Preference number: 2 (lower is better)
Translates to: ASLSSLLSSSLPPSLRMLTTDGL*MCSVSF
Trigger: AAAGCTAACGGAACACATCCAAAGACCATCAGTCGT...CAGCATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAACGATGAAAGCGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCAATTCTACCTCTGTaGCTGGGCAAGATTTCACAT +
Preference number: 2 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSILPL*LGKISH
Trigger: ATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACAT +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFSILPL*LGKISH
Trigger: ATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGITIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCTACAAAAATCAATCTaGTACATGGGCCATATTGGT +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRLQKSI*YMGHIG
Trigger: ACCAATATGGCCCATGTATCAGATTGATTTTTGTAG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNCSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAAAGAGTGCAGCTCATaGCAAGCAGGCCCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNKECSS*QAGPAS
Trigger: AGAGGCAGGGCCTGCTTGTCATGAGCTGCACTCTTT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGACTCACTGCTGAAATaGAGAGAGGTGGCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLDSLLK*REVAPN
Trigger: GTTGGGAGCCACCTCTCTTCATTTCAGCAGTGAGTC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATCATTTTTGCCCTGGTaGTTCAAAGCTCAAAGAATT +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTESFLPW*FKAQRI
Trigger: AATTCTTTGAGCTTTGAATCACCAGGGCAAAAATGA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGTCATTTTTGCCCTGGTaGTTCAAAGCTCAAAGAATT +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRSFLPW*FKAQRI
Trigger: AATTCTTTGAGCTTTGAATCACCAGGGCAAAAATGA...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTATTCACAAGGTTAGTTaGAAGTCATTTTTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFIHKVS*KSFLPW
Trigger: CCAGGGCAAAAATGACTTTCAACTAACCTTGTGAAT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCCTCATGTCACTTTTaGCCAGGGGCCAGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSSCHF*PGASPH
Trigger: ATGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGATGACAAGCAGGCCCTaGCTCTCATCCTTCCCAGAT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLMTSRP*LSSFPD
Trigger: ATCTGGGAAGGATGAGAGGCAGGGCCTGCTTGTCAT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATGACAAGCAGGCCCTaGCTCTCATCCTTCCCAGAT +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIMTSRP*LSSFPD
Trigger: ATCTGGGAAGGATGAGAGGCAGGGCCTGCTTGTCAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTGACATTCTCTCTGCATaGAATGGGCCAATTATTGTC +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVDILSA*NGPIIV
Trigger: GACAATAATTGGCCCATTGCATGCAGAGAGAATGTC...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGACAGGCTACGGAGAGATaGTGGAGAGCTGCTGCTTGT +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRQATER*WRAAAC
Trigger: ACAAGCAGCAGCTCTCCAGCATCTCTCCGTAGCCTG...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDLAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 2 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 2 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCATAGCATAAACTCTTaGCCTCCTTCATGCACTCAT +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFHSINS*PPSCTH
Trigger: ATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGCCAGCATGCGAGGTaGGGACAAACCCCTAAAATT +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSQHAR*GQTPKI
Trigger: AATTTTAGGGGTTTGTCCCCACCTCGCATGCTGGCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRRLPT*VLDTVG
Trigger: ACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTTACAGTACCCAATCCTaGGATGCCCTGATATACTTT +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVYSTQS*DALIYF
Trigger: AAAGTATATCAGGGCATCCCAGGATTGGGTACTGTA...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACTGAAGACTTATTTATaGCGACCGATGGGAAAATAT +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTELKTYL*RPMGKY
Trigger: ATATTTTCCCATCGGTCGCCATAAATAAGTCTTCAG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GCCTCGCTTTCATCGTTACTCAGTAGCTCTTTGCCTCCTTCCTTGAGAATGCTGAGACAAGGCCTTTTCTaGCTTGTATTCATCCTTTTG +
Preference number: 2 (lower is better)
Translates to: ASLSSLLSSSLPPSLRMLRQGLF*LVFILL
Trigger: CAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCT...CAGCATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAACGATGAAAGCGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CCA 90 bp GGCAGTGATTGGAGAAGTATCCGGGTTCAGCGAAGGACTCGAGTGCGACTTCTTAAGTTTAAACACGTTTaGTTTCTTCTCATAGTCCGT +
Preference number: 2 (lower is better)
Translates to: GSDWRSIRVQRRTRVRLLKFKHV*FLLIVR
Trigger: ACGGACTATGAGAAGAAACCAAACGTGTTTAAACTT...AAGAAGTCGCACTCGAGTCCTTCGCTGAACCCGGATACTTCTCCAATCACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CAA 90 bp GCCCACGTGGGTTCTGGATACTGTAGGTACAAAAGGAGAATGCCTTaGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: AHVGSGYCRYKRRMP*DFSPSFMDERWKRN
Trigger: ATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTTTGTACCTACAGTATCCAGAACCCACGTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: ILKNPILLHDQHFLAADGIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCCTTCATGCACTCATaGCAGACAGCAACCTTCAGA +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSFMHS*QTATFR
Trigger: TCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMCSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 2 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTACATGTACCATACACTaGTATGCAATCTACACACTG +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQATCTIH*YAIYTL
Trigger: CAGTGTGTAGATTGCATATCAGTGTATGGTACATGT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp ACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCCTTTTCTGGCTTGTATCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCT +
Preference number: 2 (lower is better)
Translates to: TLTAFFKSSSDKAFSGLYLADLQ*TPDRSS
Trigger: AGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAG...ATACAAGCCAGAAAAGGCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR TCA 90 bp CCATGTAGATCGGTATTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCAACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAG +
Preference number: 2 (lower is better)
Translates to: PCRSVLRSIIAQVRQWTPTLSRS*VSPTRE
Trigger: CTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGT...TGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
3UTR-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 2 (lower is better)
Translates to: YNASQSQTLELRFHPGPWSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 2 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCTGTATGGTCAATTTTaGAACAACACTATGACCAAG +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFLYGQF*NNTMTK
Trigger: CTTGGTCATAGTGTTGTTGCAAAATTGACCATACAG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGAGGGTCTTGTGTTTaGCACAAGACCACTGCACCA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIRGSCV*HKTTAP
Trigger: TGGTGCAGTGGTCTTGTGGCAAACACAAGACCCTCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTTAAACAAAAGACACTaGACTCAGCCACTCACTCAA +
Preference number: 2 (lower is better)
Translates to: YNASQSQTLELRFHPGPWLNKRH*TQPLTQ
Trigger: TTGAGTGAGTGGCTGAGTGCAGTGTCTTTTGTTTAA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp AAAAATGGGTTAGTAGTACTTCCAATACGACTGATGGTCTTTGGATGTGTTCCGGCTCCTCTTCCTTCTTaGCTCAAAGATCCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: KNGLVVLPIRLMVFGCVPAPLPS*LKDPEP
Trigger: AGGCTCAGGATCTTTGAGGCAAGAAGGAAGAGGAGC...CGGAACACATCCAAAGACCATCAGTCGTATTGGAAGTACTACTAACCCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 2 (lower is better)
Translates to: ETAGRWLGLYLTALIWTERKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATTGGGCAACAGGCTTaGAGCAGCTGTGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHIGQQA*SSCERK
Trigger: TTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGAGAAAGAATGTGATATaGATCCCCTCATTTATGTGT +
Preference number: 2 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRRKNVI*IPSFMC
Trigger: ACACATAAATGAGGGGATCCATATCACATTCTTTCT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGCTACGGAGAGATGCTaGAGAGCTGCTGCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRATERC*RAAACE
Trigger: TTCACAAGCAGCAGCTCTCCAGCATCTCTCCGTAGC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTACAAAAATCAATCTaGTACATGGGCCATATTGGT +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDLQKSI*YMGHIG
Trigger: ACCAATATGGCCCATGTATCAGATTGATTTTTGTAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCCAGTAATTAAGTTTTaGTTGCTAATGAGGAATCCC +
Preference number: 2 (lower is better)
Translates to: YNASQSQTLELRFHPGPWPVIKF*LLMRNP
Trigger: GGGATTCCTCATTAGCAATCAAAACTTAATTACTGG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCCAGTAATTAAGTTTTaGTTGCTAATGAGGAATCCC +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDPVIKF*LLMRNP
Trigger: GGGATTCCTCATTAGCAATCAAAACTTAATTACTGG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTGGAAAGAAATTTGCTaGCATGTGGCAGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLWKEIC*HVAEQW
Trigger: CCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTGGAAAGAAATTTGCTaGCATGTGGCAGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIWKEIC*HVAEQW
Trigger: CCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGACTTGGAAAACATCTGTaGTGCAGTTTCCACCCCCTC +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRLGKHL*CSFHPL
Trigger: GAGGGGGTGGAAACTGCATCACAGATGTTTTCCAAG...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCTTGGAAAACATCTGTaGTGCAGTTTCCACCCCCTC +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNLGKHL*CSFHPL
Trigger: GAGGGGGTGGAAACTGCATCACAGATGTTTTCCAAG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAATTCACTGGAACCATaGTATTCCTGTAGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLNSLEP*YSCRAA
Trigger: AGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ATACGACTGATGGTCTTTGGATGTGTTCCGTTAGCTTTCTCCTCAGTACTTTCTTACCCCTTGCAGATTTaGAATGAACTCCTGACAGGT +
Preference number: 2 (lower is better)
Translates to: IRLMVFGCVPLAFSSVLSYPLQI*NELLTG
Trigger: ACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTA...AGAAAGTACTGAGGAGAAAGCTAACGGAACACATCCAAAGACCATCAGTCGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCACTGTGATTCTTACTaGAGCATCTGTGAGTGCTCA +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCHCDSY*SICECS
Trigger: TGAGCACTCACAGATGCTCCAGTAAGAATCACAGTG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 2 (lower is better)
Translates to: VIFLPSQASTDAAPREWFKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGTAGCAGAGTGAAGTaGCTATCAAGGAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSSRVK*LSRRLR
Trigger: TCTCAGTCTCCTTGATAGCCACTTCACTCTGCTACT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAAATGTGGTTGGCTATaGGCCAGACTCTCAGAATCT +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHKCGWL*ARLSES
Trigger: AGATTCTGAGAGTCTGGCCCATAGCCAACCACATTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAAAGGAAAATGTGGTTaGCTATGGGCCAGACTCTCA +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHKGKCG*LWARLS
Trigger: TGAGAGTCTGGCCCATAGCCAACCACATTTTCCTTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGATTGGGCAACAGGCTTaGAGCAGCTGTGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLIGQQA*SSCERK
Trigger: TTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAAT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATTGGGCAACAGGCTTaGAGCAGCTGTGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIIGQQA*SSCERK
Trigger: TTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGGCCTCTTTCCCTGCTaGTTGCAAAAATTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLGLFPC*LQKFFH
Trigger: GTGGAAGAATTTTTGCAACCAGCAGGGAAAGAGGCC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAGAAAGCCTTCAATTTaGTGGTCCACAAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQARKPSI*WSTRKN
Trigger: ATTCTTTCTTGTGGACCACCAAATTGAAGGCTTTCT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACAT +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSILPL*LGKISH
Trigger: ATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATCTGCCTGCAAAGCTaGCTTACCATTTTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIICLQS*LTIFCQ
Trigger: CTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTGGATACTTCCAATACGACTaGTGGTCTTTGGATGTGTTC +
Preference number: 2 (lower is better)
Translates to: GSFKFKHVWFLLIVRGLGYFQYD*WSLDVF
Trigger: GAACACATCCAAAGACCATCAGTCGTATTGGAAGTA...TCCAAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAGGCCTCTTTCCCTaGTGGTTGCAAAAATTCTTC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRGLFP*WLQKFF
Trigger: GAAGAATTTTTGCAACCAGCAGGGAAAGAGGCCTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCACTGTGATTCTTACTaGAGCATCTGTGAGTGCTCA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIHCDSY*SICECS
Trigger: TGAGCACTCACAGATGCTCCAGTAAGAATCACAGTG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 2 (lower is better)
Translates to: CGWLWARLSESRQISDCFKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 2 (lower is better)
Translates to: LGHRVKYKPILALESHPDKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 2 (lower is better)
Translates to: SLPKTANADSFAIEKEQARKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGTAGCAGAGTGAAGTaGCTATCAAGGAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISSRVK*LSRRLR
Trigger: TCTCAGTCTCCTTGATAGCCACTTCACTCTGCTACT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 2 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGGCAGTCTGAGATCCTaGCTCACAAAAGAACCTTTA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLGSLRS*LTKEPL
Trigger: TAAAGGTTCTTTTGTGAGCCAGGATCTCAGACTGCC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGCAGTCTGAGATCCTaGCTCACAAAAGAACCTTTA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGSLRS*LTKEPL
Trigger: TAAAGGTTCTTTTGTGAGCCAGGATCTCAGACTGCC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAAATGTGGTTGGCTATaGGCCAGACTCTCAGAATCT +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIKCGWL*ARLSES
Trigger: AGATTCTGAGAGTCTGGCCCATAGCCAACCACATTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAAAGGAAAATGTGGTTaGCTATGGGCCAGACTCTCA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIKGKCG*LWARLS
Trigger: TGAGAGTCTGGCCCATAGCCAACCACATTTTCCTTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATATTGGGCAACAGGCTTaGAGCAGCTGTGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNIGQQA*SSCERK
Trigger: TTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAAT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGAAAGGAGAATGCCTTTaGATTTCAGTCCTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKKGECL*ISVLPL
Trigger: TAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAAGGGAGCTATGCCCTTaGTATTGCACACAGTACACT +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRRELCP*YCTQYT
Trigger: AGTGTACTGTGTGCAATACCAAGGGCATAGCTCCCT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTATCAAATGGTTACTTaGCTTTATAAACTCCATGGC +
Preference number: 2 (lower is better)
Translates to: YNASQSQTLELRFHPGPWYQMVT*LYKLHG
Trigger: GCCATGGAGTTTATAAAGCCAAGTAACCATTTGATA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACTACAAAAATCAATCTaGTACATGGGCCATATTGGT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLQKSI*YMGHIG
Trigger: ACCAATATGGCCCATGTATCAGATTGATTTTTGTAG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATATCTGCCTGCAAAGCTaGCTTACCATTTTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNICLQS*LTIFCQ
Trigger: CTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGAT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp CCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTTCCCTTCAGTAGCAGCATTTGGATCATaGGGAATGTCCAAAAATGGG +
Preference number: 2 (lower is better)
Translates to: PFLACIHPFASKELFPSVAAFGS*GMSKNG
Trigger: CCCATTTTTGGACATTCCTCATGATCCAAATGCTGC...TACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 2 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAATTCACTGGAACCATaGTATTCCTGTAGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLNSLEP*YSCRAA
Trigger: AGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGACATTCTCTCTGCATaGAATGGGCCAATTATTGTC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLDILSA*NGPIIV
Trigger: GACAATAATTGGCCCATTGCATGCAGAGAGAATGTC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAATTACAGGGAGCTATaGCCTTGGTATTGCACACAG +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNNYREL*PWYCTQ
Trigger: CTGTGTGCAATACCAAGGGCATAGCTCCCTGTAATT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ATACGACTGATGGTCTTTGGATGTGTTCCGTTAGCTTTCTCCTCAGTACTTTCTCTCTTCATCATCTACTaGCCATTCAAGCTTCTCATT +
Preference number: 2 (lower is better)
Translates to: IRLMVFGCVPLAFSSVLSLFIIY*PFKLLI
Trigger: AATGAGAAGCTTGAATGGGCAGTAGATGATGAAGAG...AGAAAGTACTGAGGAGAAAGCTAACGGAACACATCCAAAGACCATCAGTCGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGINQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGACATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRSSVA*PQGEIQ
Trigger: TTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACAT +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSILPL*LGKISH
Trigger: ATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCCTTCCTTTATGGATaGGAGATGGAAAAGGAATCT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSFLYG*EMEKES
Trigger: AGATTCCTTTTCCATCTCTCATCCATAAAGGAAGGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGATGACATTCTCTCTATaGAGACATTCTCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLMTFSL*RHSLCM
Trigger: CATGCAGAGAGAATGTCTTCATAGAGAGAATGTCAT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp CCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTTCCCTTCAGTACCATCCATATCTGCATaGATTTTCCGAGCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: PFLACIHPFASKELFPSVPSISA*IFRAKN
Trigger: ATTCTTGGCTCGGAAAATTCATGCAGATATGGATGG...TACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAATTCACTGGAACCATaGTATTCCTGTAGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTNSLEP*YSCRAA
Trigger: AGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCTTTCCCTGCTGGTTaGAAAAATTCTTCCACAATC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSFPAG*KNSSTI
Trigger: GATTGTGGAAGAATTTTTGCAACCAGCAGGGAAAGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTACTTGCAAAATTTTCCTaGTGTTGCATTCAAGTCAAA +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLLAKFS*CCIQVK
Trigger: TTTGACTTGAATGCAACAGCAGGAAAATTTTGCAAG...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLRKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTATTTTCTCTAATTCACTaGAACCATGCTATTCCTGTA +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLFSLIH*NHAIPV
Trigger: TACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAA...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATTTTCTCTAATTCACTaGAACCATGCTATTCCTGTA +
Preference number: 2 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLFSLIH*NHAIPV
Trigger: TACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCATAGCATAAACTCTTaGCCTCCTTCATGCACTCAT +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGHSINS*PPSCTH
Trigger: ATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAAAGGAAAATGTGGTTaGCTATGGGCCAGACTCTCA +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMKGKCG*LWARLS
Trigger: TGAGAGTCTGGCCCATAGCCAACCACATTTTCCTTT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTTAGGATGCCACTTTaGTTCTTTGTTTTACAGTGC +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILRMPL*FFVLQC
Trigger: GCACTGTAAAACAAAGAACCAAAGTGGCATCCTAAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTATATCAAATGGTTACTTaGCTTTATAAACTCCATGGC +
Preference number: 2 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLYQMVT*LYKLHG
Trigger: GCCATGGAGTTTATAAAGCCAAGTAACCATTTGATA...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATATGACATTCTCTCTATaGAGACATTCTCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNMTFSL*RHSLCM
Trigger: CATGCAGAGAGAATGTCTTCATAGAGAGAATGTCAT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGTTAAGGCCCAAAAATaGAACGTTTTGCTTCTCCTA +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNVKAQK*NVLLLL
Trigger: TAGGAGAAGCAAAACGTTTCATTTTTGGGCCTTAAC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTGTATGGTCAATTTTaGAACAACACTATGACCAAG +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILYGQF*NNTMTK
Trigger: CTTGGTCATAGTGTTGTTGCAAAATTGACCATACAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATTCTTTCCCTGCTGGTTaGAAAAATTCTTCCACAATC +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNSFPAG*KNSSTI
Trigger: GATTGTGGAAGAATTTTTGCAACCAGCAGGGAAAGA...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAATTACTTTCACAATTTaGAGGGGACATATGGCACCA +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRITFTI*RGHMAP
Trigger: TGGTGCCATATGTCCCCTGCAAATTGTGAAAGTAAT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTTTTCTCTAATTCACTaGAACCATGCTATTCCTGTA +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHFSLIH*NHAIPV
Trigger: TACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 2 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCATAGCATAAACTCTTaGCCTCCTTCATGCACTCAT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMHSINS*PPSCTH
Trigger: ATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp TTTAGATTATCAGGTAGAAAGACAGATAACTTGCTTGTGGATATGTaGGATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCC +
Preference number: 2 (lower is better)
Translates to: FRLSGRKTDNLLVDM*DSVRGYKNQSDTWA
Trigger: GGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATCCAACATATCCACAAGCAAGTTATCTGTCTTTCTACCTGATAATCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTACAAAAATCAATCTaGTACATGGGCCATATTGGT +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLQKSI*YMGHIG
Trigger: ACCAATATGGCCCATGTATCAGATTGATTTTTGTAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTGTATGGTCAATTTTaGAACAACACTATGACCAAG +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLYGQF*NNTMTK
Trigger: CTTGGTCATAGTGTTGTTGCAAAATTGACCATACAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTTTGATCATGTAAGATaGTATAAGACTGGTGGAAAG +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIFDHVR*YKTGGK
Trigger: CTTTCCACCAGTCTTATAGCATCTTACATGATCAAA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCTTGCAAAATTTTCCTaGTGTTGCATTCAAGTCAAA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLAKFS*CCIQVK
Trigger: TTTGACTTGAATGCAACAGCAGGAAAATTTTGCAAG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATTACCATACACTGATATaGAATCTACACACTGATGCA +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNYHTLI*NLHTDA
Trigger: TGCATCAGTGTGTAGATTGCATATCAGTGTATGGTA...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTTTTCTCTAATTCACTaGAACCATGCTATTCCTGTA +
Preference number: 2 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIFSLIH*NHAIPV
Trigger: TACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 2 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAAAGGAGAATGCCTTTaGATTTCAGTCCTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNKGECL*ISVLPL
Trigger: TAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAAGAAAGCCTTCAATTTaGTGGTCCACAAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRRKPSI*WSTRKN
Trigger: ATTCTTTCTTGTGGACCACCAAATTGAAGGCTTTCT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 90 bp TCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTaGCTGAGATTAATTAAAATTCACAAAAGTATTGCTCAGTTTAAT +
Preference number: 2 (lower is better)
Translates to: SRDYISIRGLSPIMV*LRLIKIHKSIAQFN
Trigger: ATTAAACTGAGCAATACTTTTGTGAATTTTAATTAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCTACAAAAATCAATCTaGTACATGGGCCATATTGGT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLQKSI*YMGHIG
Trigger: ACCAATATGGCCCATGTATCAGATTGATTTTTGTAG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 2 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 2 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTTTTCTCTAATTCACTaGAACCATGCTATTCCTGTA +
Preference number: 2 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGFSLIH*NHAIPV
Trigger: TACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAGAAAGAATGTGATATaGATCCCCTCATTTATGTGT +
Preference number: 2 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNRKNVI*IPSFMC
Trigger: ACACATAAATGAGGGGATCCATATCACATTCTTTCT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CCA 90 bp CCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTTCCCTTCAGTAAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAAT +
Preference number: 2 (lower is better)
Translates to: PFLACIHPFASKELFPSVRNVQK*VSSTSN
Trigger: ATTGGAAGTACTACTAACCCATTTTTGGACATTCCT...TACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 2 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 72 bp AGGCTCCTGGGCGCTGAGGTGGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAGGGAAGGGGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: RLLGAEVGDGGG*RTFRGKGRGAP
Trigger: GGGAGCACCCCTTCCCTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 72 bp CTTCAGAGGAAAGGGAAGGGGTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGGAGCAGCTGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: LQRKGKGCSLVP*IGQQAWSSCER
Trigger: CCTTTCACAGCTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCCCTTTCCTCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 72 bp GGAAGACCTCAATATCACAACCAGGACACAACCCCATaGCCACACACGCACACACACGCACGCACACACACA +
Preference number: 3 (lower is better)
Translates to: GRPQYHNQDTTP*PHTHTHARTHT
Trigger: TGTGTGTGTGCGTGCGTGTGTGTGCGTGTGTGGGCATGGGGTTGTGTCCTGGTTGTGATATTGAGGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 72 bp CGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTaGCTCAGCAGGGTCACGCTATCAGGACACCTGGAT +
Preference number: 3 (lower is better)
Translates to: RSVTQSLSELIP*LSRVTLSGHLD
Trigger: ATCCAGGTGTCCTGATAGCGTGACCCTGCTGAGGCAAGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 72 bp AGCCTCAGACCTGCAGTGTGGTCCTTAATCGAGCCTTaGGCTGGGACTCTTCTAGGAGCGCCTGAAGACTTA +
Preference number: 3 (lower is better)
Translates to: SLRPAVWSLIEP*AGTLLGAPEDL
Trigger: TAAGTCTTCAGGCGCTCCTAGAAGAGTCCCAGCCCAAGGCTCGATTAAGGACCACACTGCAGGTCTGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 72 bp GTAGTGGCAGGCAGAAGTGGGCGGCTAAACTTCTTCTaGGAGCCGATTGCTGCTGGAAATGGTGGTGCAGAA +
Preference number: 3 (lower is better)
Translates to: VVAGRSGRLNFF*EPIAAGNGGAE
Trigger: TTCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCGCCCACTTCTGCCTGCCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR GCA 72 bp CTTCAGAAGCCTCAGGGAAGAGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCATCATGCTACGGCAGTC +
Preference number: 3 (lower is better)
Translates to: LQKPQGRGVLSP*AKDGQHHATAV
Trigger: GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTCCCTGAGGCTTCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 72 bp AAATTTGCTGACATGTGGCAGAGCAGTGGCATGGCCTaGGAGACAAGATGGCCAGAAAGCTGTGGAGCAAGG +
Preference number: 3 (lower is better)
Translates to: KFADMWQSSGMA*ETRWPESCGAR
Trigger: CCTTGCTCCACAGCTTTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATGTCAGCAAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 72 bp GCTATCAGGACACCTGGATCCCTAAAGCAGGGGAAGTaGCATTTGAAACCCAGGCTGTCCTTGCTGCTCAGT +
Preference number: 3 (lower is better)
Translates to: AIRTPGSLKQGK*HLKPRLSLLLS
Trigger: ACTGAGCAGCAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCTGCTTTAGGGATCCAGGTGTCCTGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACAGGGGAAGTGGCATTaGAAACCCAGGCTGTCCTTG +
Preference number: 3 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEQGKWH*KPRLSL
Trigger: CAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCTG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 72 bp AGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTaGAAAACATCTGTGATGCAGTTTCCACCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: SQTLELRFHPGP*KTSVMQFPPPL
Trigger: CAGAGGGGGTGGAAACTGCATCACAGATGTTTTCCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 72 bp CTCCTGAGACAGTTTTGTTGTAGTGGCAGGCAGAAGTaGGCGGCTAAACTTCTTCTGAGAGCCGATTGCTGC +
Preference number: 3 (lower is better)
Translates to: LLRQFCCSGRQK*AAKLLLRADCC
Trigger: GCAGCAATCGGCTCTCAGAAGAAGTTTAGCCGCCCACTTCTGCCTGCCACTACAACAAAACTGTCTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTCAAGGGCCGATTATaGCCCCCATCCTTTAGCAAA +
Preference number: 3 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLKGRL*PPSFSK
Trigger: TTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: YNASQSQTLELRFHPGPWGRGAP*YRELGN
Trigger: GTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACAGGGAGCTATGCCCTaGGTATTGCACACAGTACAC +
Preference number: 3 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEQGAMP*VLHTVH
Trigger: GTGTACTGTGTGCAATACCAAGGGCATAGCTCCCTG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCAGGGGAAGTGGCATTaGAAACCCAGGCTGTCCTTG +
Preference number: 3 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPQGKWH*KPRLSL
Trigger: CAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCTG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTCTTTCCCTTGCTaGGCTGAAATGGAATCAGCA +
Preference number: 3 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSSFPC*AEMESA
Trigger: TGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCCTCTTTCCCTTGCTaGGCTGAAATGGAATCAGCA +
Preference number: 3 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSSFPC*AEMESA
Trigger: TGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCA +
Preference number: 3 (lower is better)
Translates to: LGHRVKYKPILALESHPDPLYRE*GNRLGA
Trigger: TGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 3 (lower is better)
Translates to: LGHRVKYKPILALESHPDFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 3 (lower is better)
Translates to: YNASQSQTLELRFHPGPWFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR GCA 72 bp GTGGAGCAAGGTAGGAGGCCCAGAGGCGCATCTGCCTaGAAAGCTGACTTACCATTTTCTGTCAGAATAACT +
Preference number: 3 (lower is better)
Translates to: VEQGRRPRGASA*KADLPFSVRIT
Trigger: AGTTATTCTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGATGCGCCTCTGGGCCTCCTACCTTGCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 72 bp TGGTTTCTTCTCATAGTCCGTGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGCGTTTTTCAAGTCCTC +
Preference number: 3 (lower is better)
Translates to: WFLLIVRGLGCQ*VVHTHSVFQVL
Trigger: GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACGGACTATGAGAAGAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CAA 90 bp CGTGGCCTTGGATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCAAGGCCTTTTCTGGCTaGTATTCATCCTTTTGCAAG +
Preference number: 3 (lower is better)
Translates to: RGLGCQCVVHTHSVFQVLKAFSG*YSSFCK
Trigger: CTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTT...GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CAA 90 bp GCCTCGCTTTCATCGTTACTCAGTAGCTCTTTGCCTCCTTCCTTGAGAATGCTGTACTCATCGACGTCCTaGGCTTTGACCTTCTTGTCG +
Preference number: 3 (lower is better)
Translates to: ASLSSLLSSSLPPSLRMLYSSTS*ALTFLS
Trigger: CGACAAGAAGGTCAAAGCCAAGGACGTCGATGAGTA...CAGCATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAACGATGAAAGCGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR GCA 72 bp CACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTGGATaGCAATGCGTGGTGCACACTCACAGCGTTTTTCAA +
Preference number: 3 (lower is better)
Translates to: HVWFLLIVRGLG*QCVVHTHSVFQ
Trigger: TTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACGGACTATGAGAAGAAACCAAACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTCAAGGGCCGATTATaGCCCCCATCCTTTAGCAAA +
Preference number: 3 (lower is better)
Translates to: CGWLWARLSESRQISDCFLKGRL*PPSFSK
Trigger: TTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACTCAAGGGCCGATTATaGCCCCCATCCTTTAGCAAA +
Preference number: 3 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLKGRL*PPSFSK
Trigger: TTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTATTAGTTCTGAAGTaGTGCCACTTGCGGAGATTT +
Preference number: 3 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLLVLK*CHLRRF
Trigger: AAATCTCCGCAAGTGGCACAACTTCAGAACTAATAG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 3 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 3 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTACAGGAAGTGCCTCCTaGTTTCTTCACTTGTACTCC +
Preference number: 3 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSTGSAS*FLHLYS
Trigger: GGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTTTCCATCCTCGCTGTaGTTGCTGATGGAAAAGTGC +
Preference number: 3 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSFPSSL*LLMEKC
Trigger: GCACTTTTCCATCAGCAACAACAGCGAGGATGGAAA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp TGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCTGTACACAGCAGCATTaGGATCATGAGGAATGTCCA +
Preference number: 3 (lower is better)
Translates to: CQCVVHTHSVFQVLFRQGCTQQH*DHEECP
Trigger: TGGACATTCCTCATGATCCAAATGCTGCTGTGTACA...GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR TCA 72 bp AGGGTCCGATCTCAACAACAAGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAGCAACTAGATTCCCAG +
Preference number: 3 (lower is better)
Translates to: RVRSQQQVLSCT*SCLILEQLDSQ
Trigger: CTGGGAATCTAGTTGCTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCACTTGTTGTTGAGATCGGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 72 bp AATCGAGCCTTGGGCTGGGACTCTTCTAGGAGCGCCTaGAGACTTATTTATGGCGACCGATGGGAAAATATT +
Preference number: 3 (lower is better)
Translates to: NRALGWDSSRSA*RLIYGDRWENI
Trigger: AATATTTTCCCATCGGTCGCCATAAATAAGTCTTCAGGCGCTCCTAGAAGAGTCCCAGCCCAAGGCTCGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 72 bp AATGCTTGGTGTTTCAGGTCGGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTTGGCAGTGATTGGAGA +
Preference number: 3 (lower is better)
Translates to: NAWCFRSVILPL*HVTLDFGSDWR
Trigger: TCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCACCGACCTGAAACACCAAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR GCA 72 bp CATGCCTACTGCTGCAGCTCCTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAACAAAATTAACTGGGTA +
Preference number: 3 (lower is better)
Translates to: HAYCCSSSRADY*PHPLANKINWV
Trigger: TACCCAGTTAATTTTGTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 72 bp GTTTCCTCCCATAGCATAAACTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAACCTTCAGAAGCCTCA +
Preference number: 3 (lower is better)
Translates to: VSSHSINSWPPS*THDRQQPSEAS
Trigger: TGAGGCTTCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATGGGAGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 72 bp AGTGTGGACAAGGCACATCAGTGCTCCTACAGGAAGTaGCTCCTTGTTTCTTCACTTGTACTCCTCTCTCAA +
Preference number: 3 (lower is better)
Translates to: SVDKAHQCSYRK*LLVSSLVLLSQ
Trigger: TTGAGAGAGGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGTAGGAGCACTGATGTGCCTTGTCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 72 bp GGGCCAATTATTGTCATAAGCAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGTACAAAAGGAGAATGC +
Preference number: 3 (lower is better)
Translates to: GPIIVISRRLPT*VLDTVGTKGEC
Trigger: GCATTCTCCTTTTGTACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCTGCTTATGACAATAATTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 72 bp ATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTaGCCCTTGGAAAACATCTGTGATGCAGTTTCCACC +
Preference number: 3 (lower is better)
Translates to: ISKSDTRAQIPP*PLENICDAVST
Trigger: GGTGGAAACTGCATCACAGATGTTTTCCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCCTCTTTCCCTTGCTaGGCTGAAATGGAATCAGCA +
Preference number: 3 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSSFPC*AEMESA
Trigger: TGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 3 (lower is better)
Translates to: ETAGRWLGLYLTALIWTERAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 3 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQDTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 3 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCA +
Preference number: 3 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHPLYRE*GNRLGA
Trigger: TGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLGRGAP*YRELGN
Trigger: GTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGRGAP*YRELGN
Trigger: GTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGTGACAGCATTTTCTTaGATGACTGACATACTGCCT +
Preference number: 3 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRVTAFS*MTDILP
Trigger: AGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCAC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 3 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 3 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSRAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 3 (lower is better)
Translates to: ETAGRWLGLYLTALIWTERQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGAAAGACAGATAACTaGCTTGTGGATATGTTGGAT +
Preference number: 3 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRKTDN*LVDMLD
Trigger: ATCCAACATATCCACAAGCAAGTTATCTGTCTTTCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCA +
Preference number: 3 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLPLYRE*GNRLGA
Trigger: TGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGGRGAP*YRELGN
Trigger: GTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 3 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 3 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 72 bp TCGGTTCCTTTCCATTTCCATCCTCGCTGTTGTTGCTaGTGGAAAAGTGCTCAACTGCTCAGCATGTTCAGT +
Preference number: 3 (lower is better)
Translates to: SVPFHFHPRCCC*WKSAQLLSMFS
Trigger: ACTGAACATGCTGAGCAGTTGAGCACTTTTCCATCAGCAACAACAGCGAGGATGGAAATGGAAAGGAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 3 (lower is better)
Translates to: CGWLWARLSESRQISDCFLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCTCAAGGGCCGATTATaGCCCCCATCCTTTAGCAAA +
Preference number: 3 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLKGRL*PPSFSK
Trigger: TTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTATTAGTTCTGAAGTaGTGCCACTTGCGGAGATTT +
Preference number: 3 (lower is better)
Translates to: CGWLWARLSESRQISDCFLLVLK*CHLRRF
Trigger: AAATCTCCGCAAGTGGCACAACTTCAGAACTAATAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTATTAGTTCTGAAGTaGTGCCACTTGCGGAGATTT +
Preference number: 3 (lower is better)
Translates to: LGHRVKYKPILALESHPDLLVLK*CHLRRF
Trigger: AAATCTCCGCAAGTGGCACAACTTCAGAACTAATAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMGRGAP*YRELGN
Trigger: GTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAAACCTATCTTAGCCTaGGAAAGCCACCCAGATTTT +
Preference number: 3 (lower is better)
Translates to: SLPKTANADSFAIEKEQAKPILA*ESHPDF
Trigger: AAAATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp CAGATAGTGGTCTTTCAGTTTGTACTCATCGACGTCCTTGGCTTTGACCTTCTTGCTTTCAGCAGATCCTaGGAGAAATCAACACCCTCA +
Preference number: 3 (lower is better)
Translates to: QIVVFQFVLIDVLGFDLLAFSRS*EKSTPS
Trigger: TGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGC...AAGAAGGTCAAAGCCAAGGACGTCGATGAGTACAAACTGAAAGACCACTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR TCA 72 bp TACCAGAAAGATCTTGAAAAACCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGCAGATGGACTCTAAGT +
Preference number: 3 (lower is better)
Translates to: YQKDLEKPYFAP*PALPGRRWTLS
Trigger: ACTTAGAGTCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR GCA 72 bp AAAAAGAAAAGAGTGCAGCTCATGACAAGCAGGCCCTaGCTCTCATCCTTCCCAGATCTTTACATGATAGAG +
Preference number: 3 (lower is better)
Translates to: KKKRVQLMTSRP*LSSFPDLYMIE
Trigger: CTCTATCATGTAAAGATCTGGGAAGGATGAGAGGCAGGGCCTGCTTGTCATGAGCTGCACTCTTTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR GCA 72 bp TTCTTAGAAGGAAATACTCTCGCAAAACTAAGACCCTaGCAATCATTCACAGAGCCAGTCCACTGCACGTCA +
Preference number: 3 (lower is better)
Translates to: FLEGNTLAKLRP*QSFTEPVHCTS
Trigger: TGACGTGCAGTGGACTGGCTCTGTGAATGATTGGCAGGGTCTTAGTTTTGCGAGAGTATTTCCTTCTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR GCA 72 bp CTGGTTCTGAATCTCAGGAGGAGAGGACTAACCACATaGATGGTTACCCTAAATGGAAAGCAACCACTTTAC +
Preference number: 3 (lower is better)
Translates to: LVLNLRRRGLTT*MVTLNGKQPLY
Trigger: GTAAAGTGGTTGCTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAGAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CCA 72 bp AAATCAGTGACTGTTTCCTCCCATAGCATAAACTCTTaGCCTCCTTCATGCACTCATGACAGACAGCAACCT +
Preference number: 3 (lower is better)
Translates to: KSVTVSSHSINS*PPSCTHDRQQP
Trigger: AGGTTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATGGGAGGAAACAGTCACTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCTCAAGGGCCGATTATaGCCCCCATCCTTTAGCAAA +
Preference number: 3 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLKGRL*PPSFSK
Trigger: TTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: CGWLWARLSESRQISDCFINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 3 (lower is better)
Translates to: CGWLWARLSESRQISDCFDTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 3 (lower is better)
Translates to: LGHRVKYKPILALESHPDDTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCA +
Preference number: 3 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMPLYRE*GNRLGA
Trigger: TGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 3 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 3 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAAGCAGCTCTGCCACCTaGGAAAATGATGCACACCAG +
Preference number: 3 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSSSAT*ENDAHQ
Trigger: CTGGTGTGCATCATTTTCCAAGGTGGCAGAGCTGCT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp CAGATAGTGGTCTTTCAGTTTGTACTCATCGACGTCCTTGGCTTTGACCTTCTTGCCAAGAATCCACTTTaGTACACAGCAGCATTTGGA +
Preference number: 3 (lower is better)
Translates to: QIVVFQFVLIDVLGFDLLAKNPL*YTAAFG
Trigger: TCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGC...AAGAAGGTCAAAGCCAAGGACGTCGATGAGTACAAACTGAAAGACCACTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR TCA 72 bp GTAACTTTTTGCTTAATGCTTGGTGTTTCAGGTCGGTaGTCCTTCCTCTCTGACACGTTACGCTTGACTTTG +
Preference number: 3 (lower is better)
Translates to: VTFCLMLGVSGR*SFLSDTLRLTL
Trigger: CAAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCACCGACCTGAAACACCAAGCATTAAGCAAAAAGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCCTCTTTCCCTTGCTaGGCTGAAATGGAATCAGCA +
Preference number: 3 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSSFPC*AEMESA
Trigger: TGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGAAAGACAGATAACTaGCTTGTGGATATGTTGGAT +
Preference number: 3 (lower is better)
Translates to: CGWLWARLSESRQISDCFRKTDN*LVDMLD
Trigger: ATCCAACATATCCACAAGCAAGTTATCTGTCTTTCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGAAAGACAGATAACTaGCTTGTGGATATGTTGGAT +
Preference number: 3 (lower is better)
Translates to: LGHRVKYKPILALESHPDRKTDN*LVDMLD
Trigger: ATCCAACATATCCACAAGCAAGTTATCTGTCTTTCT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAAAACCTATCTTAGCCTaGGAAAGCCACCCAGATTTT +
Preference number: 3 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLKPILA*ESHPDF
Trigger: AAAATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 72 bp TGGGCCACCTGTATGGTCAATTTTGCAACAACACTATaGCCAAGGCATTCTGATAGCTGTCAAGATTTTCTG +
Preference number: 3 (lower is better)
Translates to: WATCMVNFATTL*PRHSDSCQDFL
Trigger: CAGAAAATCTTGACAGCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 72 bp CTTCATCATCTACTGCCCATTCAAGCTTCTCATTCTTaGTTGAGTTGTACAGAGCTTTCAGCAGATCCTTGG +
Preference number: 3 (lower is better)
Translates to: LHHLLPIQASHS*LSCTELSADPW
Trigger: CCAAGGATCTGCTGAAAGCTCTGTACAACTCAATCAAGAATGAGAAGCTTGAATGGGCAGTAGATGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR GCA 72 bp GGAGAAATCAACACCCTCATTTACCCCTTGCAGATTTaGAATGAACTCCTGACAGGTCATCTTCTTTCCAAT +
Preference number: 3 (lower is better)
Translates to: GEINTLIYPLQI*NELLTGHLLSN
Trigger: ATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGGTGTTGATTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CCA 72 bp CTACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTaGAACCATGCTATTCCTGTAGAGCAGCTGATTCTT +
Preference number: 3 (lower is better)
Translates to: LPWLYSRFSLIH*NHAIPVEQLIL
Trigger: AAGAATCAGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 72 bp TCTGCAACTGCAAACCTAGGATACAGTACCCAATCCTaGGATGCCCTGATATACTTTAGTGCTTGTGATATT +
Preference number: 3 (lower is better)
Translates to: SATANLGYSTQS*DALIYFSACDI
Trigger: AATATCACAAGCACTAAAGTATATCAGGGCATCCCAGGATTGGGTACTGTATCCTAGGTTTGCAGTTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 3 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATACGACTGATGGTCTTTGGATGTGTTCCGTTAGCTTTCTCCTCAGTACTTTCTTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 3 (lower is better)
Translates to: IRLMVFGCVPLAFSSVLSLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...AGAAAGTACTGAGGAGAAAGCTAACGGAACACATCCAAAGACCATCAGTCGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 3 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLRQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 3 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATTTTCCATCCTCGCTGTaGTTGCTGATGGAAAAGTGC +
Preference number: 3 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNFPSSL*LLMEKC
Trigger: GCACTTTTCCATCAGCAACAACAGCGAGGATGGAAA...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGAACTCTCTCTCGTTCTaGAGTTTCTCCCACAAGAGA +
Preference number: 3 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMNSLSF*SFSHKR
Trigger: TCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTT...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
3UTR TCA 72 bp TACTGGAGCATCTGTGAGTGCTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACATATAAAGGCGTATATT +
Preference number: 3 (lower is better)
Translates to: YWSICECSILPL*LGKISHIKAYI
Trigger: AATATACGCCTTTATATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGAGCACTCACAGATGCTCCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 72 bp ACAACAATGGCAGGTGACAGCATTTTCTTTGATGACTaGCATACTGCCTGTAAGAATAGTCTCCAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: TTMAGDSIFFDD*HTACKNSLQKP
Trigger: AGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCACCTGCCATTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCCTCTTTCCCTTGCTaGGCTGAAATGGAATCAGCA +
Preference number: 3 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSSFPC*AEMESA
Trigger: TGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 3 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 3 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHDTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 3 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 3 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAAACCTATCTTAGCCTaGGAAAGCCACCCAGATTTT +
Preference number: 3 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIKPILA*ESHPDF
Trigger: AAAATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAAGCTCAGTGTAACTTaGTGTTTAGGCAGTAAGAGG +
Preference number: 3 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLKLSVT*CLGSKR
Trigger: CCTCTTACTGCCTAAACACAAAGTTACACTGAGCTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAAGCTCAGTGTAACTTaGTGTTTAGGCAGTAAGAGG +
Preference number: 3 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIKLSVT*CLGSKR
Trigger: CCTCTTACTGCCTAAACACAAAGTTACACTGAGCTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 3 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTATTAGTTCTGAAGTaGTGCCACTTGCGGAGATTT +
Preference number: 3 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLLVLK*CHLRRF
Trigger: AAATCTCCGCAAGTGGCACAACTTCAGAACTAATAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 3 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIDTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 3 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIRQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 3 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 3 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATCCTTGTTTCTTCACTaGTACTCCTCTCTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSLFLH*YSSLKG
Trigger: TCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 72 bp TTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATaGATTTTCCGAGCCAAGAATCCACTTTTGTACACA +
Preference number: 3 (lower is better)
Translates to: FPLGVFFPSISA*IFRAKNPLLYT
Trigger: TGTGTACAAAAGTGGATTCTTGGCTCGGAAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CCA 72 bp TCTGTTTATCACCCTGAACTTCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCAAAGTTAATAGAACCA +
Preference number: 3 (lower is better)
Translates to: SVYHPELQRDCN*NKLMTAKLIEP
Trigger: TGGTTCTATTAACTTTGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTGAAGTTCAGGGTGATAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 72 bp CAAAAATTCTTCCACAATCTCAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAAACCTATCTTAGCCTT +
Preference number: 3 (lower is better)
Translates to: QKFFHNLRSSVA*PQGEIQTYLSL
Trigger: AAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCTGAGATTGTGGAAGAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CCA 72 bp TTTCTGTATTTCCCAAATTACAGGGAGCTATGCCCTTaGTATTGCACACAGTACACTGCAAAAGATTCACAA +
Preference number: 3 (lower is better)
Translates to: FLYFPNYRELCP*YCTQYTAKDSQ
Trigger: TTGTGAATCTTTTGCAGTGTACTGTGTGCAATACCAAGGGCATAGCTCCCTGTAATTTGGGAAATACAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000614430.3
3UTR-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCTATTAGTTCTGAAGTaGTGCCACTTGCGGAGATTT +
Preference number: 3 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLLVLK*CHLRRF
Trigger: AAATCTCCGCAAGTGGCACAACTTCAGAACTAATAG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 3 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 3 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 72 bp TTATCGCCTTTCTGCCTGTCCTATGGTAATCAAGGCTaGCAATATAAATTCTCCGCTAGTGTACATTTAGAA +
Preference number: 3 (lower is better)
Translates to: LSPFCLSYGNQG*QYKFSASVHLE
Trigger: TTCTAAATGTACACTAGCGGAGAATTTATATTGTCAGCCTTGATTACCATAGGACAGGCAGAAAGGCGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR TCA 72 bp AATCAACACCCTCATTTACCCCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCTTCTTTCCAATATTAT +
Preference number: 3 (lower is better)
Translates to: NQHPHLPLADLQ*TPDRSSSFQYY
Trigger: ATAATATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGGTGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR TCA 72 bp AAGAATCCACTTTTGTACACAGCAGCATTTGGATCATaGGGAATGTCCAAAAATGGGTTAGTAGTACTTCCA +
Preference number: 3 (lower is better)
Translates to: KNPLLYTAAFGS*GMSKNGLVVLP
Trigger: TGGAAGTACTACTAACCCATTTTTGGACATTCCTCATGATCCAAATGCTGCTGTGTACAAAAGTGGATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CCA 72 bp GATTATTGCCCCCATCCTTTAGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAGCCTTCAAAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: DYCPHPLANKIN*VSIFPQPSKAK
Trigger: TTTTGCCTTTGAAGGCTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGCTAAAGGATGGGGGCAATAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 3 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR-3UTR CAA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGAATATTCTGGCTCTTaGCATCTTAAGGTCTTATGT +
Preference number: 3 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNEYSGS*HLKVLC
Trigger: ACATAAGACCTTAAGATGCAAAGAGCCAGAATATTC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGAAAGACAGATAACTaGCTTGTGGATATGTTGGAT +
Preference number: 3 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRKTDN*LVDMLD
Trigger: ATCCAACATATCCACAAGCAAGTTATCTGTCTTTCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR TCA 72 bp GAAAGCCTTCAATTTGGTGGTCCACAAGAAAGAATGTaGTATGGATCCCCTCATTTATGTGTTAAAAATATA +
Preference number: 3 (lower is better)
Translates to: ESLQFGGPQERM*YGSPHLCVKNI
Trigger: TATATTTTTAACACATAAATGAGGGGATCCATATCACATTCTTTCTTGTGGACCACCAAATTGAAGGCTTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCTGCGGGGTTGTGCCTaGGCAGCTCCTGAGCGCCGT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLRGCA*AAPERR
Trigger: ACGGCGCTCAGGAGCTGCTCAGGCACAACCCCGCAG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTESWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGGGGGATATGAGCGGTaGTCGGCCAGCTCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQGGYER*SASSVV
Trigger: CACCACCGAGCTGGCCGAGCACCGCTCATATCCCCC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTGCTCAGTAGAAGCCTaGGTGAAGTGGCGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQCSVEA*VKWRPG
Trigger: CCCCGGCCGCCACTTCACTCAGGCTTCTACTGAGCA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFSWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAGGCTGGACACCCTGCTaGTCTTGTGGGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEGWTPC*SCGWHG
Trigger: GCCATGCCACCCACAAGAGCAGCAGGGTGTCCAGCC...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQGDGGG*RTFRGK
Trigger: CTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGGCCTGGGCGTCCCATaGAGCTGCTTCGATCACATC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVGLGVP*SCFDHI
Trigger: GATGTGATCGAAGCAGCTCCATGGGACGCCCAGGCC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCCAAGGCTCTCACGCTaGAGGAACTCTGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVPRLSR*RNSAGL
Trigger: CAACCCCGCAGAGTTCCTCCAGCGTGAGAGCCTTGG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
3UTR CAA 72 bp TGGCGTACCTTCAGAGGAAAGGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAACAGGCTTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WRTFRGKGRGAP*YRELGNRLGAA
Trigger: AGCTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCCCTTTCCTCTGAAGGTACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
3UTR CAA 72 bp AAGCAGGGGAAGTGGCATTTGAAACCCAGGCTGTCCTaGCTGCTCAGTAGAAGCCTGAGTGAAGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: KQGKWHLKPRLS*LLSRSLSEVAA
Trigger: GGCCGCCACTTCACTCAGGCTTCTACTGAGCAGCAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTGCTCAGTAGAAGCCTaGGTGAAGTGGCGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFCSVEA*VKWRPG
Trigger: CCCCGGCCGCCACTTCACTCAGGCTTCTACTGAGCA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGGGGGATATGAGCGGTaGTCGGCCAGCTCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFGGYER*SASSVV
Trigger: CACCACCGAGCTGGCCGAGCACCGCTCATATCCCCC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGGGGGATATGAGCGGTaGTCGGCCAGCTCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDGGYER*SASSVV
Trigger: CACCACCGAGCTGGCCGAGCACCGCTCATATCCCCC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCCCCTGGGGTGCGCCTaGACCATCCTTCCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFPLGCA*TILPLR
Trigger: TCGGAGAGGAAGGATGGTCCAGGCGCACCCCAGGGG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286485.12
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGATGTTTGACCCGGCCTaGGCGTCCCATGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRMFDPA*ASHGAA
Trigger: AGCAGCTCCATGGGACGCCCAGGCCGGGTCAAACAT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 72 bp CATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTaGATACCTTGCCTCAGCAGGGTCACGCTATCAGGA +
Preference number: 4 (lower is better)
Translates to: HVPRSVTQSLSE*IPCLSRVTLSG
Trigger: TCCTGATAGCGTGACCCTGCTGAGGCAAGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCGGCCAGCTCGGTGGTaGTCTGCTTCAGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRPARW*SASAYF
Trigger: AAAGTAAGCTGAAGCAGATCACCACCGAGCTGGCCG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GGCAGTGATTGGAGAAGTATCCGGGTTCAGCGAAGGACTCGAGTGCGACTTCTTGGTGTTTCAGGTCGGTaGTCCTTCCTCTCTGACACG +
Preference number: 4 (lower is better)
Translates to: GSDWRSIRVQRRTRVRLLGVSGR*SFLSDT
Trigger: CGTGTCAGAGAGGAAGGATCACCGACCTGAAACACC...AAGAAGTCGCACTCGAGTCCTTCGCTGAACCCGGATACTTCTCCAATCACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGGTGTTTCAGGTCGGTaGTCCTTCCTCTCTGACACG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVGVSGR*SFLSDT
Trigger: CGTGTCAGAGAGGAAGGATCACCGACCTGAAACACC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVCSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGTGCCAGGCCTCTCTaGAGGAGCTTTCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSARPL*RSFPGF
Trigger: GAATCCTGGAAAGCTCCTTCAGAGAGGCCTGGCACT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACAGGACTCAGAGCAGTaGGCCTCAGACCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEQDSEQ*ASDLQC
Trigger: ACACTGCAGGTCTGAGGCTCACTGCTCTGAGTCCTG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCGCAACCCCTGGGGTaGGCCTGGACCATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFSQPLG*AWTILP
Trigger: AGGAAGGATGGTCCAGGCGCACCCCAGGGGTTGCGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286485.12
CDS-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGC +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRGLGCQ*VVHTHS
Trigger: GCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGGGGGGATATGAGCGGTaGTCGGCCAGCTCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKGGYER*SASSVV
Trigger: CACCACCGAGCTGGCCGAGCACCGCTCATATCCCCC...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGGACAAGATGGCTCCTaGACACAGACAGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVGQDGS*TQTAPF
Trigger: GAAAGGGGCTGTCTGTGTGCAGGAGCCATCTTGTCC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGAAACCAACACTGCCTaGAGAGTGGCAGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVETNTA*RVAGHC
Trigger: GCAGTGACCTGCCACTCTGCAGGCAGTGTTGGTTTC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCATAGTCCGTGGCCTTaGATGCCAATGCGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVHSPWP*MPMRGA
Trigger: TGCACCACGCATTGGCATCCAAGGCCACGGACTATG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCATGGCCAGAAAGCTGTaGAGCAAGGTAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVMARKL*SKVGGP
Trigger: TGGGCCTCCTACCTTGCTCCACAGCTTTCTGGCCAT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAACACTGCCTGCAGAGTaGCAGGTCACTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTETLPAE*QVTAEL
Trigger: GAGCTCAGCAGTGACCTGCCACTCTGCAGGCAGTGT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 72 bp AGAGGAAAGGGAAGGGGTGCTCCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCAGCTGTGAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RGKGRGAPLYRE*GNRLGAAVKGN
Trigger: GTTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCCCTTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TCTGACACGTTACGCTTGACTTTGGCAGTGATTGGAGAAGTATCCGGGTTCAGCCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SDTLRLTLAVIGEVSGFSPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...GCTGAACCCGGATACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGACTCACTGCTGAAATaGAGAGAGGTGGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQDSLLK*REVAPN
Trigger: GTTGGGAGCCACCTCTCTTCATTTCAGCAGTGAGTC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGGGATGACTCACTGCTaGAATGAAGAGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQGMTHC*NEERWL
Trigger: GAGCCACCTCTCTTCATTTCAGCAGTGAGTCATCCC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCTGATGTCCTCCCCCTaGTGTCCTCTCCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRLMSSP*CPLQEL
Trigger: CAGTTCTTGGAGAGGACATCAGGGGGAGGACATCAG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTGCCACCTTGGAAAATaGTGCACACCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVCHLGK*CTPASG
Trigger: CCCAGAAGCTGGTGTGCATCATTTTCCAAGGTGGCA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGTATTTCACGGAACCTaGGGTCCTCACCCGTACCTT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVVFHGT*GPHPYL
Trigger: AAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATAC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGATGGACTTTGACCTGTaGGACTGCCGCCGGATAGAA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQMDFDL*DCRRIE
Trigger: TTCTATCCGGCGGCAGTCTCACAGGTCAAAGTCCAT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CGTGGCCTTGGATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCGATGCCAATGCGTGGTaGACACTCACAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RGLGCQCVVHTHSVFQVLDANAW*TLTAFF
Trigger: GAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC...GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTTCTGAGAGCCGATTaGTGCTGGAAATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLLRAD*CWKWWC
Trigger: GCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCCTCATGTCACTTTTaGCCAGGGGCCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSSCHF*PGASPH
Trigger: ATGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCCTCACCCGTACCTTaGTGGCACTCTGGACACTAT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSSPVP*WHSGHY
Trigger: ATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CGTGGCCTTGGATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCGTTTGGCCAACCTTTTaGCTGCTTCCACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLGCQCVVHTHSVFQVLVWPTF*LLPHCC
Trigger: GCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAAC...GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCATAGTCCGTGGCCTTaGATGCCAATGCGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRHSPWP*MPMRGA
Trigger: TGCACCACGCATTGGCATCCAAGGCCACGGACTATG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRRLPT*VLDTVG
Trigger: ACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGGCCTGGGCGTCCCATaGAGCTGCTTCGATCACATC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFGLGVP*SCFDHI
Trigger: GATGTGATCGAAGCAGCTCCATGGGACGCCCAGGCC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGCTGTACACGTCGGTaGAGTCCTCCGTATATCCAG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSCTRR*SPPYIQ
Trigger: CTGGATATACGGAGGACTCCACCGACGTGTACAGCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCCGGCTAAACTTCTTCTaGGAGCCGATTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CQCVVHTHSVFQVLFRQGRLNFF*EPIAAG
Trigger: TCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCG...GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFCSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCAGTTAACAGCGCGGTaGGATCTTTCTGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVQLTAR*DLSGCS
Trigger: TGAGCATCCAGAAAGATCTCACCGCGCTGTTAACTG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCAGTTAACAGCGCGGTaGGATCTTTCTGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQQLTAR*DLSGCS
Trigger: TGAGCATCCAGAAAGATCTCACCGCGCTGTTAACTG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGAAATTCCACATGTTTaGCCCGGCCTGGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDEIPHV*PGLGVP
Trigger: TGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATGCCACCTTGGAAAATaGTGCACACCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTECHLGK*CTPASG
Trigger: CCCAGAAGCTGGTGTGCATCATTTTCCAAGGTGGCA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAGGGGAAGTGGCATTTaGAACCCAGGCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSRGSGI*NPGCPC
Trigger: GCAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTATGTGCCACGCTCAGTaGCTCAGTCACTCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFMCHAQ*LSHSRS
Trigger: ACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACAT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTGCGGGGTTGTGCCTaGGCAGCTCCTGAGCGCCGT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILRGCA*AAPERR
Trigger: ACGGCGCTCAGGAGCTGCTCAGGCACAACCCCGCAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAATTTTCATGGACTTTaGCCTGTGAGACTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVNFHGL*PVRLPP
Trigger: CGGCGGCAGTCTCACAGGTCAAAGTCCATGAAAATT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGATGCCAATGCGTGGTaGACACTCACAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQDANAW*TLTAFF
Trigger: GAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGGGGATATGAGCGGTaGTCGGCCAGCTCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGGYER*SASSVV
Trigger: CACCACCGAGCTGGCCGAGCACCGCTCATATCCCCC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTCCGAGCGGGGGATATGAGCGGTaGTCGGCCAGCTCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFSSWSLLSIHICMNFPSGGYER*SASSVV
Trigger: CACCACCGAGCTGGCCGAGCACCGCTCATATCCCCC...GCTCGGAAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp GGCAGTGATTGGAGAAGTATCCGGGTTCAGCGAAGGACTCGAGTGCGACTTCTTCGACTTCTTCAGTCCTaGAGCCTCGCTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: GSDWRSIRVQRRTRVRLLRLLQS*SLAFIV
Trigger: AACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTCG...AAGAAGTCGCACTCGAGTCCTTCGCTGAACCCGGATACTTCTCCAATCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGCACATGCCTACTGCTaGAGCTCCTCAAGGGCCGAT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDAHAYC*SSSRAD
Trigger: ATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATGTGC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGAGGGTCTTGTGTTTaGCACAAGACCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRGSCV*HKTTAP
Trigger: TGGTGCAGTGGTCTTGTGGCAAACACAAGACCCTCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGCGGCCAGCGCCGCGTaGTCTTTGTTGAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLAASAA*SLLSSR
Trigger: CCGGGAGCTCAACAAAGAGCACGCGGCGCTGGCCGC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327040.13
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGCTGGACACCCTGCTaGTCTTGTGGGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGWTPC*SCGWHG
Trigger: GCCATGCCACCCACAAGAGCAGCAGGGTGTCCAGCC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTTCACATCCCCCTGGGTaGTCTCTCCCAAGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQASHPPG*SLPRAD
Trigger: GTCTGCTCTTGGGAGAGAGCACCCAGGGGGATGTGA...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAATAGCCCATCACGATaGCACCATCTGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQNSPSR*HHLQTH
Trigger: GTGTGTCTGCAGATGGTGGCATCGTGATGGGCTATT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAAGCAATCTCCGGGGTaGCTTTCGTGTAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQKQSPG*LSCRWS
Trigger: ACTCCATCTACACGAAAGGCACCCCGGAGATTGCTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAGCAATCTCCGGGGTaGCTTTCGTGTAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVKQSPG*LSCRWS
Trigger: ACTCCATCTACACGAAAGGCACCCCGGAGATTGCTT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTCAGGCTACGGAGAGATaGTGGAGAGCTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSQATER*WRAAAC
Trigger: ACAAGCAGCAGCTCTCCAGCATCTCTCCGTAGCCTG...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGTCGGAGTTGATACCTTaGCTCAGCAGGGTCACGCTA +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRSELIP*LSRVTL
Trigger: TAGCGTGACCCTGCTGAGGCAAGGTATCAACTCCGA...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGCCCATCGCAACCCCTaGGGTGCGCCTGGACCATCC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLAHRNP*GAPGPS
Trigger: GGATGGTCCAGGCGCACCCCAGGGGTTGCGATGGGC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286485.12
CDS-3UTR CCA 90 bp TGTAGATCGGTATTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTGCCCATCGCAACCCCTaGGGTGCGCCTGGACCATCC +
Preference number: 4 (lower is better)
Translates to: CRSVLRSIIAQVRQWTPSAHRNP*GAPGPS
Trigger: GGATGGTCCAGGCGCACCCCAGGGGTTGCGATGGGC...AGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCTTCTCATAGTCCGTaGCCTTGGATGCCAATGCGT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSSHSP*PWMPMR
Trigger: ACGCATTGGCATCCAAGGCCACGGACTATGAGAAGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTTCTCATAGTCCGTaGCCTTGGATGCCAATGCGT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSSHSP*PWMPMR
Trigger: ACGCATTGGCATCCAAGGCCACGGACTATGAGAAGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTATGGCCAGAAAGCTGTaGAGCAAGGTAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFMARKL*SKVGGP
Trigger: TGGGCCTCCTACCTTGCTCCACAGCTTTCTGGCCAT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGCCTTGGCAACACTCTaGGAATGTGCAGATGCATTG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQALATL*ECADAL
Trigger: CAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTGCTGCTCTTGTGGGTaGCATGGCAGAGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDCCSCG*HGRASP
Trigger: TGGTGAGGCTCTGCCATGCCACCCACAAGAGCAGCA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGCTGATGAGATGAGATaGCGTGGCACTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQADEMR*RGTLED
Trigger: GTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTGTAGATGGAGTCGCTaGCATCATTCAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVCRWSR*HHSAHW
Trigger: CCAATGGGCTGAATGATGCCAGCGACTCCATCTACA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGCAGCTCTGCCACCTTaGAAAATGATGCACACCAGC +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRAALPP*KMMHTS
Trigger: GCTGGTGTGCATCATTTTCCAAGGTGGCAGAGCTGC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCACCCGTACCTTGCTaGCACTCTGGACACTATTCA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSPVPC*HSGHYS
Trigger: TGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCACCCGTACCTTGCTaGCACTCTGGACACTATTCA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSPVPC*HSGHYS
Trigger: TGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCTCCCCATTTCAGAATaGGCTTCTAGCCGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLPISE*ASSRVV
Trigger: AACAACACGGCTAGAAGCTCATTCTGAAATGGGGAG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCGGCTAAACTTCTTCTaGGAGCCGATTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFRLNFF*EPIAAG
Trigger: TCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACGGCCAGCTCGGTGGTaGTCTGCTTCAGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGRPARW*SASAYF
Trigger: AAAGTAAGCTGAAGCAGATCACCACCGAGCTGGCCG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCGGCCAGCTCGGTGGTaGTCTGCTTCAGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFRPARW*SASAYF
Trigger: AAAGTAAGCTGAAGCAGATCACCACCGAGCTGGCCG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCGGCCAGCTCGGTGGTaGTCTGCTTCAGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDRPARW*SASAYF
Trigger: AAAGTAAGCTGAAGCAGATCACCACCGAGCTGGCCG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQVILPL*HVTLDF
Trigger: AAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCAC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGGTGTTTCAGGTCGGTaGTCCTTCCTCTCTGACACG +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAGVSGR*SFLSDT
Trigger: CGTGTCAGAGAGGAAGGATCACCGACCTGAAACACC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGGTGTTTCAGGTCGGTaGTCCTTCCTCTCTGACACG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFGVSGR*SFLSDT
Trigger: CGTGTCAGAGAGGAAGGATCACCGACCTGAAACACC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCCTTCATGCACTCATaGCAGACAGCAACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSFMHS*QTATFR
Trigger: TCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGCSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFCSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDCSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAAGGCTCCTGGGCGCTaGGGTGGGCGACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMKAPGR*GGRRRW
Trigger: CCACCTCCGTCGCCCACCTCAGCGCCCAGGAGCCTT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTGGAAAGAAATTTGCTaGCATGTGGCAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQWKEIC*HVAEQW
Trigger: CCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGAGAGGGGGCCTCTCTaGCATCTTTTGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWERGPL*HLLVLL
Trigger: CAGAAGGACCAAAAGATGTCAGAGAGGCCCCCTCTC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTGAGAGGGGGCCTCTCTaGCATCTTTTGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVERGPL*HLLVLL
Trigger: CAGAAGGACCAAAAGATGTCAGAGAGGCCCCCTCTC...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGAGAGGGGGCCTCTCTaGCATCTTTTGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGERGPL*HLLVLL
Trigger: CAGAAGGACCAAAAGATGTCAGAGAGGCCCCCTCTC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGGAAATTCCACATGTTTaGCCCGGCCTGGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKEIPHV*PGLGVP
Trigger: TGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTC...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGTGCCAGGCCTCTCTaGAGGAGCTTTCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSARPL*RSFPGF
Trigger: GAATCCTGGAAAGCTCCTTCAGAGAGGCCTGGCACT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAGTCCTCTCCAAGAACTaGCCACCTTCTTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEVLSKN*PPSLMR
Trigger: GCGCATTAAAGAAGGTGGTCAGTTCTTGGAGAGGAC...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTGATGTCCTCCCCCTaGTGTCCTCTCCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFLMSSP*CPLQEL
Trigger: CAGTTCTTGGAGAGGACATCAGGGGGAGGACATCAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCCTCTCTCAAAGGAATaGTCTGCAGAGCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRPLSKE*SAEQAA
Trigger: AGCTGCTTGCTCTGCAGATCATTCCTTTGAGAGAGG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCGACAGTTTCGCCATTaGAAAGGAGCAGGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRRQFRH*KGAGCY
Trigger: ATAGCAGCCTGCTCCTTTTCAATGGCGAAACTGTCG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGGTATCTTCGCAACCCCTGGGGTaGGCCTGGACCATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SIIAQVRQWTPSCEAMVSSQPLG*AWTILP
Trigger: AGGAAGGATGGTCCAGGCGCACCCCAGGGGTTGCGA...AGATACCATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR GCA 90 bp GTCGGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTTCGCAACCCCTGGGGTaGGCCTGGACCATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VGSFKFKHVWFLLIVRGLSQPLG*AWTILP
Trigger: AGGAAGGATGGTCCAGGCGCACCCCAGGGGTTGCGA...AAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp GATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGGCCAACCTTTTGGCTaGTTCCACATTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DANAWCTLTAFFKSSSDKGQPFG*FHIAAG
Trigger: ACCAGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCC...CTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCTGAGAGCCGATTGCTaGTGGAAATGGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPLRADC*WKWWCR
Trigger: TCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCTTCTGAGAGCCGATTaGTGCTGGAAATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFLLRAD*CWKWWC
Trigger: GCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGCTTCTGAGAGCCGATTaGTGCTGGAAATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: DANAWCTLTAFFKSSSDKLLRAD*CWKWWC
Trigger: GCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAG...CTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGGGGATATGAGCGGTaGTCGGCCAGCTCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGGYER*SASSVV
Trigger: CACCACCGAGCTGGCCGAGCACCGCTCATATCCCCC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGAGAGGGTCTTGTGTTTaGCACAAGACCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRRGSCV*HKTTAP
Trigger: TGGTGCAGTGGTCTTGTGGCAAACACAAGACCCTCT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGAGGCGCATCTGCCTaGAAAGCTGACTTACCATTT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRGASA*KADLPF
Trigger: AAATGGTAAGTCAGCTTTGCAGGCAGATGCGCCTCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTCCAAACAAATGTCTCTaGCGCTGCGCTCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSPNKCL*RCAPSF
Trigger: GAAGGAAGGAGCGCAGCGGCAGAGACATTTGTTTGG...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGGACAAGATGGCTCCTaGACACAGACAGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAGQDGS*TQTAPF
Trigger: GAAAGGGGCTGTCTGTGTGCAGGAGCCATCTTGTCC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTTCAAGCGAGTACGGATaGGGCACCACGAGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVSSEYG*GTTRVV
Trigger: AACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGA...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTCAGGCTACGGAGAGATaGTGGAGAGCTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAQATER*WRAAAC
Trigger: ACAAGCAGCAGCTCTCCAGCATCTCTCCGTAGCCTG...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTCGGAGTTGATACCTTaGCTCAGCAGGGTCACGCTA +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPSELIP*LSRVTL
Trigger: TAGCGTGACCCTGCTGAGGCAAGGTATCAACTCCGA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGCCCCTGGGGTGCGCCTaGACCATCCTTCCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMPLGCA*TILPLR
Trigger: TCGGAGAGGAAGGATGGTCCAGGCGCACCCCAGGGG...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CCA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTCCCCTGGGGTGCGCCTaGACCATCCTTCCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFPLGCA*TILPLR
Trigger: TCGGAGAGGAAGGATGGTCCAGGCGCACCCCAGGGG...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGTTTGGCCAACCTTTTaGCTGCTTCCACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRVWPTF*LLPHCC
Trigger: GCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAAC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGCACAGGTAAGGCAATaGACTCCATCTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQAQVRQ*TPSCEA
Trigger: TGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACATAGTCCGTGGCCTTaGATGCCAATGCGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGHSPWP*MPMRGA
Trigger: TGCACCACGCATTGGCATCCAAGGCCACGGACTATG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR CCA 90 bp TGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCTCTTCTCATAGTCCGTaGCCTTGGATGCCAATGCGT +
Preference number: 4 (lower is better)
Translates to: CQCVVHTHSVFQVLFRQGSSHSP*PWMPMR
Trigger: ACGCATTGGCATCCAAGGCCACGGACTATGAGAAGA...GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGAGCCGATTGCTGCTaGAAATGGTGGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRADCC*KWWCRK
Trigger: TTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTATGACCAGCACTTCCTaGCCGCAGATGGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFMTSTS*PQMDSK
Trigger: CTTAGAGTCCATCTGCGGCCAGGAAGTGCTGGTCAT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGATTGGGCAACAGGCTTaGAGCAGCTGTGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQIGQQA*SSCERK
Trigger: TTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAAT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCCTGGGCGCTGAGGTaGGCGACGGAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSWALR*ATEVGG
Trigger: GCCACCCACCTCCGTCGCCCACCTCAGCGCCCAGGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGGCCTCTTTCCCTGCTaGTTGCAAAAATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVGLFPC*LQKFFH
Trigger: GTGGAAGAATTTTTGCAACCAGCAGGGAAAGAGGCC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAATGGCCAGAAAGCTGTaGAGCAAGGTAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGMARKL*SKVGGP
Trigger: TGGGCCTCCTACCTTGCTCCACAGCTTTCTGGCCAT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGAGCAGTGGCATGGCCTaGGAGACAAGATGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWSSGMA*ETRWPE
Trigger: TTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGCAGTGGCATGGCCTaGGAGACAAGATGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDSSGMA*ETRWPE
Trigger: TTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGCAGTGGCATGGCCTaGGAGACAAGATGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFSSGMA*ETRWPE
Trigger: TTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGT +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSRRLPT*VLDTVG
Trigger: ACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGCCTTGGCAACACTCTaGGAATGTGCAGATGCATTG +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRALATL*ECADAL
Trigger: CAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGGCCAAAGGACAAGATaGCTCCTGCACACAGACAGC +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDGQRTR*LLHTDS
Trigger: GCTGTCTGTGTGCAGGAGCCATCTTGTCCTTTGGCC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTGGCCAAAGGACAAGATaGCTCCTGCACACAGACAGC +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVGQRTR*LLHTDS
Trigger: GCTGTCTGTGTGCAGGAGCCATCTTGTCCTTTGGCC...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAGGCCTGGGCGTCCCATaGAGCTGCTTCGATCACATC +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLGLGVP*SCFDHI
Trigger: GATGTGATCGAAGCAGCTCCATGGGACGCCCAGGCC...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAATGTTTGACCCGGCCTaGGCGTCCCATGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLMFDPA*ASHGAA
Trigger: AGCAGCTCCATGGGACGCCCAGGCCGGGTCAAACAT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGTCCTTAATCGAGCCTTaGGCTGGGACTCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRSLIEP*AGTLLG
Trigger: TCCTAGAAGAGTCCCAGCCCAAGGCTCGATTAAGGA...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 72 bp AAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTaGGAAAACATCTGTGATGCAGTTTCCACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KSDTRAQIPPWP*ENICDAVSTPS
Trigger: AGAGGGGGTGGAAACTGCATCACAGATGTTTTCCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGCAGCATTTGGATCATaGGGAATGTCCAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQAAFGS*GMSKNG
Trigger: CCCATTTTTGGACATTCCTCATGATCCAAATGCTGC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCGGCTAAACTTCTTCTaGGAGCCGATTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFRLNFF*EPIAAG
Trigger: TCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCGGCTAAACTTCTTCTaGGAGCCGATTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVRLNFF*EPIAAG
Trigger: TCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDTIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGACTCACTGCTGAAATaGAGAGAGGTGGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFDSLLK*REVAPN
Trigger: GTTGGGAGCCACCTCTCTTCATTTCAGCAGTGAGTC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGGGATGACTCACTGCTaGAATGAAGAGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGGMTHC*NEERWL
Trigger: GAGCCACCTCTCTTCATTTCAGCAGTGAGTCATCCC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGGGATGACTCACTGCTaGAATGAAGAGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWGMTHC*NEERWL
Trigger: GAGCCACCTCTCTTCATTTCAGCAGTGAGTCATCCC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGGGATGACTCACTGCTaGAATGAAGAGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDGMTHC*NEERWL
Trigger: GAGCCACCTCTCTTCATTTCAGCAGTGAGTCATCCC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCATCTGCCTGCAAAGCTaGCTTACCATTTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVICLQS*LTIFCQ
Trigger: CTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGAT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGTAATGTTCCGGAAATaGTTCTGGCTTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQVMFRK*FWLLWL
Trigger: AAGCCACAGAAGCCAGAATCATTTCCGGAACATTAC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTGGGAAATCTCTGCCTaGGTGTCTCCAGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPWEISA*VSPVNS
Trigger: GCTGTTAACTGGAGACACTCAGGCAGAGATTTCCCA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAGAAATTCCACATGTTTaGCCCGGCCTGGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLEIPHV*PGLGVP
Trigger: TGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTC...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGACCACGAGAGTGGTTTaGTCTCCCGTAAAACATACA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQTTRVV*SPVKHT
Trigger: TGTATGTTTTACGGGAGATCAAACCACTCTCGTGGT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTCGACAGTTTCGCCATTaGAAAGGAGCAGGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSRQFRH*KGAGCY
Trigger: ATAGCAGCCTGCTCCTTTTCAATGGCGAAACTGTCG...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGTATTTCACGGAACCTaGGGTCCTCACCCGTACCTT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGVFHGT*GPHPYL
Trigger: AAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATAC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGGCCAACCTTTTGGCTaGTTCCACATTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWGQPFG*FHIAAG
Trigger: ACCAGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTGATGCCAATGCGTGGTaGACACTCACAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFDANAW*TLTAFF
Trigger: GAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGLGCQ*VVHTHS
Trigger: GCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp CAGATAGTGGTCTTTCAGTTTGTACTCATCGACGTCCTTGGCTTTGACCTTCTTGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGC +
Preference number: 4 (lower is better)
Translates to: QIVVFQFVLIDVLGFDLLGLGCQ*VVHTHS
Trigger: GCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCC...AAGAAGGTCAAAGCCAAGGACGTCGATGAGTACAAACTGAAAGACCACTATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACTGAGAGCCGATTGCTaGTGGAAATGGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLRADC*WKWWCR
Trigger: TCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGCTCGGTGGTGATCTaGTTCAGCTTACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSSVVI*FSLLSC
Trigger: ACATGAAAGTAAGCTGAAGCAGATCACCACCGAGCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GGCAGTGATTGGAGAAGTATCCGGGTTCAGCGAAGGACTCGAGTGCGACTTCTTAGCTCGGTGGTGATCTaGTTCAGCTTACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: GSDWRSIRVQRRTRVRLLSSVVI*FSLLSC
Trigger: ACATGAAAGTAAGCTGAAGCAGATCACCACCGAGCT...AAGAAGTCGCACTCGAGTCCTTCGCTGAACCCGGATACTTCTCCAATCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCGACTTCTTCAGTCCTaGAGCCTCGCTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPRLLQS*SLAFIV
Trigger: AACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTCG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGTCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCCTCATGTCACTTTTaGCCAGGGGCCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFSSCHF*PGASPH
Trigger: ATGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTCCTCATGTCACTTTTaGCCAGGGGCCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDSSCHF*PGASPH
Trigger: ATGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGAGGCCTCTTTCCCTaGTGGTTGCAAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRGLFP*WLQKFF
Trigger: GAAGAATTTTTGCAACCAGCAGGGAAAGAGGCCTCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAATGACAAGCAGGCCCTaGCTCTCATCCTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGMTSRP*LSSFPD
Trigger: ATCTGGGAAGGATGAGAGGCAGGGCCTGCTTGTCAT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAATTACAGGGAGCTATaGCCTTGGTATTGCACACAG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVNYREL*PWYCTQ
Trigger: CTGTGTGCAATACCAAGGGCATAGCTCCCTGTAATT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCCAAACAAATGTCTCTaGCGCTGCGCTCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVPNKCL*RCAPSF
Trigger: GAAGGAAGGAGCGCAGCGGCAGAGACATTTGTTTGG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTCAAGAAACCAACACTaGCTGCAGAGTGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFSRNQH*LQSGRS
Trigger: TGACCTGCCACTCTGCAGGCAGTGTTGGTTTCTTGA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGCGTCCCATGGAGCTaGTTCGATCACATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGVPWS*FDHIPL
Trigger: CAGGGGGATGTGATCGAAGCAGCTCCATGGGACGCC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAGTGAGCCTCAGACCTaGAGTGTGGTCCTTAATCGA +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSSEPQT*SVVLNR
Trigger: TCGATTAAGGACCACACTGCAGGTCTGAGGCTCACT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATACGCTGGAGGAACTCTaGGGGGTTGTGCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHTLEEL*GVVPEQ
Trigger: CTGCTCAGGCACAACCCCGCAGAGTTCCTCCAGCGT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTTGGATGCCAATGCGTaGTGCACACTCACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFLDANA*CTLTAF
Trigger: AAACGCTGTGAGTGTGCACCACGCATTGGCATCCAA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTCTTCTCATAGTCCGTaGCCTTGGATGCCAATGCGT +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSSSHSP*PWMPMR
Trigger: ACGCATTGGCATCCAAGGCCACGGACTATGAGAAGA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAGACTTTGGCAGTGATTaGAGAAGTATCCGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEDFGSD*RSIRVQ
Trigger: CTGAACCCGGATACTTCTCCAATCACTGCCAAAGTC...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTTCCTGGCCGCAGATaGACTCTAAGTAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLPGRR*TLSNFL
Trigger: CAAAAAGTTACTTAGAGTCCATCTGCGGCCAGGAAG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGGCAGTCTGAGATCCTaGCTCACAAAAGAACCTTTA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVGSLRS*LTKEPL
Trigger: TAAAGGTTCTTTTGTGAGCCAGGATCTCAGACTGCC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAAATGTGGTTGGCTATaGGCCAGACTCTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQKCGWL*ARLSES
Trigger: AGATTCTGAGAGTCTGGCCCATAGCCAACCACATTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAATGTGGTTGGCTATaGGCCAGACTCTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVKCGWL*ARLSES
Trigger: AGATTCTGAGAGTCTGGCCCATAGCCAACCACATTT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAAAGGAAAATGTGGTTaGCTATGGGCCAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQKGKCG*LWARLS
Trigger: TGAGAGTCTGGCCCATAGCCAACCACATTTTCCTTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGDGGG*RTFRGK
Trigger: CTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGGTGGGCGACGGAGGTaGGTGGCGTACCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGGGRRR*VAYLQR
Trigger: CCTCTGAAGGTACGCCACCCACCTCCGTCGCCCACC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAAGTCCCAAGGCTCCTaGGCGCTGAGGTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGKSQGS*ALRWAT
Trigger: CGTCGCCCACCTCAGCGCCCAGGAGCCTTGGGACTT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGRRLPT*VLDTVG
Trigger: ACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFRRLPT*VLDTVG
Trigger: ACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACTCTTGTGGGTGGCATaGCAGAGCCTCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLLWVA*QSLTIK
Trigger: TTTGATGGTGAGGCTCTGCCATGCCACCCACAAGAG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATGCTGCTCTTGTGGGTaGCATGGCAGAGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLCCSCG*HGRASP
Trigger: TGGTGAGGCTCTGCCATGCCACCCACAAGAGCAGCA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTAGAAACAGCATCTTaGTCCAGTACCTTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLETAS*SSTFVA
Trigger: GGCTACAAAGGTACTGGACCAAGATGCTGTTTCTAG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTAGCTGTACACGTCGGTaGAGTCCTCCGTATATCCAG +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVSCTRR*SPPYIQ
Trigger: CTGGATATACGGAGGACTCCACCGACGTGTACAGCT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGCTGTACACGTCGGTaGAGTCCTCCGTATATCCAG +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDSCTRR*SPPYIQ
Trigger: CTGGATATACGGAGGACTCCACCGACGTGTACAGCT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATGCCTTTCGTGTAGATaGAGTCGCTGGCATCATTCA +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTECLSCR*SRWHHS
Trigger: TGAATGATGCCAGCGACTCCATCTACACGAAAGGCA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTGCTCAGATTCCACCCTaGCCCTTGGAAAACATCTGT +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSAQIPP*PLENIC
Trigger: ACAGATGTTTTCCAAGGGCCAGGGTGGAATCTGAGC...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTGCTCAGATTCCACCCTaGCCCTTGGAAAACATCTGT +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPAQIPP*PLENIC
Trigger: ACAGATGTTTTCCAAGGGCCAGGGTGGAATCTGAGC...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTCCTTAATCGAGCCTTaGGCTGGGACTCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFSLIEP*AGTLLG
Trigger: TCCTAGAAGAGTCCCAGCCCAAGGCTCGATTAAGGA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCTCAGACCTGCAGTGTaGTCCTTAATCGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVLRPAV*SLIEPW
Trigger: CCAAGGCTCGATTAAGGACCACACTGCAGGTCTGAG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TCTGACACGTTACGCTTGACTTTGGCAGTGATTGGAGAAGTATCCGGGTTCAGCCTCCCCATTTCAGAATaGGCTTCTAGCCGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SDTLRLTLAVIGEVSGFSLPISE*ASSRVV
Trigger: AACAACACGGCTAGAAGCTCATTCTGAAATGGGGAG...GCTGAACCCGGATACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVFAMNS*QVIFFP
Trigger: TGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRLADLQ*TPDRSS
Trigger: AGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTACTTCCAATACGACTaGTGGTCTTTGGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQYFQYD*WSLDVF
Trigger: GAACACATCCAAAGACCATCAGTCGTATTGGAAGTA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCAGCTGCCACACAATTaGTTTTGTTTATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQQLPHN*FCLSTL
Trigger: AAGGGTGGATAAACAAAATCAATTGTGTGGCAGCTG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGTGTTTCAGGTCGGTaGTCCTTCCTCTCTGACACG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGVSGR*SFLSDT
Trigger: CGTGTCAGAGAGGAAGGATCACCGACCTGAAACACC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSILPL*LGKISH
Trigger: ATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKTIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTCCTTCATGCACTCATaGCAGACAGCAACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFSFMHS*QTATFR
Trigger: TCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAAAGAGTGCAGCTCATaGCAAGCAGGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLKECSS*QAGPAS
Trigger: AGAGGCAGGGCCTGCTTGTCATGAGCTGCACTCTTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGATCTGCCTGCAAAGCTaGCTTACCATTTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRICLQS*LTIFCQ
Trigger: CTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGAT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTGGAAAGAAATTTGCTaGCATGTGGCAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFWKEIC*HVAEQW
Trigger: CCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCAGTTAACAGCGCGGTaGGATCTTTCTGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFQLTAR*DLSGCS
Trigger: TGAGCATCCAGAAAGATCTCACCGCGCTGTTAACTG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTGGGAAATCTCTGCCTaGGTGTCTCCAGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWWEISA*VSPVNS
Trigger: GCTGTTAACTGGAGACACTCAGGCAGAGATTTCCCA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTGGGAAATCTCTGCCTaGGTGTCTCCAGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDWEISA*VSPVNS
Trigger: GCTGTTAACTGGAGACACTCAGGCAGAGATTTCCCA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGACACTCAGGATATCCTaGTGTCCTCCCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKTLRIS*CPPPDV
Trigger: GACATCAGGGGGAGGACATCAGGATATCCTGAGTGT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTACAGTCAACTGGTTCTaGATCTCAGGAGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVTVNWF*ISGGED
Trigger: GTCCTCTCCTCCTGAGATTCAGAACCAGTTGACTGT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCCTCGCTGTTGTTGCTaGTGGAAAAGTGCTCAACTG +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWPRCCC*WKSAQL
Trigger: CAGTTGAGCACTTTTCCATCAGCAACAACAGCGAGG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAATGTGCCACGCTCAGTaGCTCAGTCACTCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLMCHAQ*LSHSRS
Trigger: ACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACAT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TCTGACACGTTACGCTTGACTTTGGCAGTGATTGGAGAAGTATCCGGGTTCAGCTTGCCTCAAAGATCCTaGGCCTTAATCTTGGCTACG +
Preference number: 4 (lower is better)
Translates to: SDTLRLTLAVIGEVSGFSLPQRS*ALILAT
Trigger: CGTAGCCAAGATTAAGGCTCAGGATCTTTGAGGCAA...GCTGAACCCGGATACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGLGCQ*VVHTHS
Trigger: GCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCGACTTCTTCAGTCCTaGAGCCTCGCTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDRLLQS*SLAFIV
Trigger: AACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTCG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCGACTTCTTCAGTCCTaGAGCCTCGCTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFRLLQS*SLAFIV
Trigger: AACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTCG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPSRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGACATTCTCTCTGCATaGAATGGGCCAATTATTGTC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVDILSA*NGPIIV
Trigger: GACAATAATTGGCCCATTGCATGCAGAGAGAATGTC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAAATGTCTCTGCCGCTaGGCTCCTTCCTTCCATCTT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDKCLCR*APSFHL
Trigger: AAGATGGAAGGAAGGAGCGCAGCGGCAGAGACATTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGGCTGGACACCCTGCTaGTCTTGTGGGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRGWTPC*SCGWHG
Trigger: GCCATGCCACCCACAAGAGCAGCAGGGTGTCCAGCC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGAGGCTGGACACCCTaGTGCTCTTGTGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRGWTP*CSCGWH
Trigger: ATGCCACCCACAAGAGCAGCAGGGTGTCCAGCCTCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGAGGCTGGACACCCTaGTGCTCTTGTGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCRGWTP*CSCGWH
Trigger: ATGCCACCCACAAGAGCAGCAGGGTGTCCAGCCTCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGACAAGATGGCTCCTaGACACAGACAGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGQDGS*TQTAPF
Trigger: GAAAGGGGCTGTCTGTGTGCAGGAGCCATCTTGTCC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCACATCCCCCTGGGTaGTCTCTCCCAAGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSHPPG*SLPRAD
Trigger: GTCTGCTCTTGGGAGAGAGCACCCAGGGGGATGTGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTCTTCCCCCTTAACGTaGTCCTCTTGTTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWSSPLT*SSCSLI
Trigger: GATCAGCGAACAAGAGGAGCACGTTAAGGGGGAAGA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCTTCCCCCTTAACGTaGTCCTCTTGTTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSSPLT*SSCSLI
Trigger: GATCAGCGAACAAGAGGAGCACGTTAAGGGGGAAGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACACGATGCCACCATCTaGAGACACACTCAGGATATC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGHDATI*RHTQDI
Trigger: GATATCCTGAGTGTGTCTGCAGATGGTGGCATCGTG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCACGATGCCACCATCTaGAGACACACTCAGGATATC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFHDATI*RHTQDI
Trigger: GATATCCTGAGTGTGTCTGCAGATGGTGGCATCGTG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAATAGCCCATCACGATaGCACCATCTGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGNSPSR*HHLQTH
Trigger: GTGTGTCTGCAGATGGTGGCATCGTGATGGGCTATT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGCAAAACTAAGACCCTaGCAATCATTCACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRAKLRP*QSFTEP
Trigger: TGGCTCTGTGAATGATTGGCAGGGTCTTAGTTTTGC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCCCTGCAAAGGGAAATaGATTTTAGTTCGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVPCKGK*ILVRFL
Trigger: AAGGAACCGAACTAAAATGCATTTCCCTTTGCAGGG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGACGCTGGAGGAACTCTaGGGGGTTGTGCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLTLEEL*GVVPEQ
Trigger: CTGCTCAGGCACAACCCCGCAGAGTTCCTCCAGCGT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGTTTGGCCAACCTTTTaGCTGCTTCCACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWVWPTF*LLPHCC
Trigger: GCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAAC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGACGACTGATGGTCTTTaGATGTGTTCCGTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQTTDGL*MCSVSF
Trigger: AAAGCTAACGGAACACATCCAAAGACCATCAGTCGT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTTGGATGCCAATGCGTaGTGCACACTCACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWLDANA*CTLTAF
Trigger: AAACGCTGTGAGTGTGCACCACGCATTGGCATCCAA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATTGGATGCCAATGCGTaGTGCACACTCACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLDANA*CTLTAF
Trigger: AAACGCTGTGAGTGTGCACCACGCATTGGCATCCAA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCATAGCATAAACTCTTaGCCTCCTTCATGCACTCAT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVHSINS*PPSCTH
Trigger: ATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTATTGGGCAACAGGCTTaGAGCAGCTGTGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPIGQQA*SSCERK
Trigger: TTTCCTTTCACAGCTGCTCCAAGCCTGTTGCCCAAT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGDGGG*RTFRGK
Trigger: CTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRSSVA*PQGEIQ
Trigger: TTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRSSVA*PQGEIQ
Trigger: TTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCATTCATATTTGGCCTTaGCAACACTCTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVIHIWP*QHSGNV
Trigger: CACATTCCCAGAGTGTTGCCAAGGCCAAATATGAAT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTGTGTTTTACGACTaGCAGTGTCCAGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSVFYD*QCPALF
Trigger: AAAAAGAGCTGGACACTGCCAGTCGTAAAACACAGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATACACTGCCTGCAGAGTaGCAGGTCACTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHTLPAE*QVTAEL
Trigger: GAGCTCAGCAGTGACCTGCCACTCTGCAGGCAGTGT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTACACTGCCTGCAGAGTaGCAGGTCACTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCTLPAE*QVTAEL
Trigger: GAGCTCAGCAGTGACCTGCCACTCTGCAGGCAGTGT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATGTAGATGGAGTCGCTaGCATCATTCAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGCRWSR*HHSAHW
Trigger: CCAATGGGCTGAATGATGCCAGCGACTCCATCTACA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAATCGAGCCTTGGGCTaGGACTCTTCTAGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHNRALG*DSSRSA
Trigger: GGCGCTCCTAGAAGAGTCCCAGCCCAAGGCTCGATT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAATCGAGCCTTGGGCTaGGACTCTTCTAGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCNRALG*DSSRSA
Trigger: GGCGCTCCTAGAAGAGTCCCAGCCCAAGGCTCGATT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTAAAGCAGGGGAAGTaGCATTTGAAACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLKQGK*HLKPRL
Trigger: CAGCCTGGGTTTCAAATGCCACTTCCCCTGCTTTAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTTTGCAGGGGACATATaGCACCAGGACTGCAATAGA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFFAGDI*HQDCNR
Trigger: TCTATTGCAGTCCTGGTGCCATATGTCCCCTGCAAA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCCAAGGCTCTCACGCTaGAGGAACTCTGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLPRLSR*RNSAGL
Trigger: CAACCCCGCAGAGTTCCTCCAGCGTGAGAGCCTTGG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWTLSRS*VSPTRE
Trigger: CTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGTTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRFAMNS*QVIFFP
Trigger: TGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAA...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCAGCATTTGGATCATaGGGAATGTCCAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: DANAWCTLTAFFKSSSDKAAFGS*GMSKNG
Trigger: CCCATTTTTGGACATTCCTCATGATCCAAATGCTGC...CTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGTGTTTCAGGTCGGTaGTCCTTCCTCTCTGACACG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGVSGR*SFLSDT
Trigger: CGTGTCAGAGAGGAAGGATCACCGACCTGAAACACC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCCTTCATGCACTCATaGCAGACAGCAACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSFMHS*QTATFR
Trigger: TCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAAGAGTGCAGCTCATaGCAAGCAGGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKECSS*QAGPAS
Trigger: AGAGGCAGGGCCTGCTTGTCATGAGCTGCACTCTTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTGGAAAGAAATTTGCTaGCATGTGGCAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFWKEIC*HVAEQW
Trigger: CCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCACATGTACCATACACTaGTATGCAATCTACACACTG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVTCTIH*YAIYTL
Trigger: CAGTGTGTAGATTGCATATCAGTGTATGGTACATGT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGATTCACAAGGTTAGTTaGAAGTCATTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQIHKVS*KSFLPW
Trigger: CCAGGGCAAAAATGACTTTCAACTAACCTTGTGAAT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGTGCCAGGCCTCTCTaGAGGAGCTTTCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSARPL*RSFPGF
Trigger: GAATCCTGGAAAGCTCCTTCAGAGAGGCCTGGCACT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCAGGACTCAGAGCAGTaGGCCTCAGACCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIQDSEQ*ASDLQC
Trigger: ACACTGCAGGTCTGAGGCTCACTGCTCTGAGTCCTG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTGGGTTCCTAAAGCTTaGGATATAAGAGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPWVPKA*DIRDCR
Trigger: CCTGCAGTCTCTTATATCTCAAGCTTTAGGAACCCA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTGGGTTCCTAAAGCTTaGGATATAAGAGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSWVPKA*DIRDCR
Trigger: CCTGCAGTCTCTTATATCTCAAGCTTTAGGAACCCA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTTTCCATCCATATCTaGATGAATTTTCCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLSIHI*MNFPSQ
Trigger: TTGGCTCGGAAAATTCATGCAGATATGGATGGAAAG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLGLGCQ*VVHTHS
Trigger: GCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCCTCATGTCACTTTTaGCCAGGGGCCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSSCHF*PGASPH
Trigger: ATGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAATGACAAGCAGGCCCTaGCTCTCATCCTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLMTSRP*LSSFPD
Trigger: ATCTGGGAAGGATGAGAGGCAGGGCCTGCTTGTCAT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCATTCAGGATGCAACATaGTTAACTGATGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVIQDAT*LTDDCK
Trigger: CTTGCAGTCATCAGTTAAGCATGTTGCATCCTGAAT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGAGAGGCGCATCTGCCTaGAAAGCTGACTTACCATTT +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWRGASA*KADLPF
Trigger: AAATGGTAAGTCAGCTTTGCAGGCAGATGCGCCTCT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACTGGGAATGTGCAGATaGATTGTTCACCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTELGMCR*IVHPNK
Trigger: TTTGTTTGGGTGAACAATGCATCTGCACATTCCCAG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGGCGTCCCATGGAGCTaGTTCGATCACATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNGVPWS*FDHIPL
Trigger: CAGGGGGATGTGATCGAAGCAGCTCCATGGGACGCC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCAAGCGAGTACGGATaGGGCACCACGAGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSSEYG*GTTRVV
Trigger: AACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTTAAACAAAAGACACTaGACTCAGCCACTCACTCAA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLNKRH*TQPLTQ
Trigger: TTGAGTGAGTGGCTGAGTGCAGTGTCTTTTGTTTAA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAGAGGACTAACCACATaGATGGTTACCCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTERGLTT*MVTLNG
Trigger: TCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTGCTCCTACAGGAAGTaGCTCCTTGTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFCSYRK*LLVSSL
Trigger: AAGTGAAGAAACAAGGAGGCACTTCCTGTAGGAGCA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAGACAAGGCACATCAGTaGTCCTACAGGAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLDKAHQ*SYRKCL
Trigger: GAGGCACTTCCTGTAGGAGCACTGATGTGCCTTGTC...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGCTCGGTGGTGATCTaGTTCAGCTTACTTTCATGC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFSSVVI*FSLLSC
Trigger: GCATGAAAGTAAGCTGAAGCAGATCACCACCGAGCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614430.3
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGCACAGGTAAGGCAATaGACTCCATCTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGAQVRQ*TPSCEA
Trigger: TGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR CCA 90 bp TGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCACGACTGATGGTCTTTaGATGTGTTCCGTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: CQCVVHTHSVFQVLFRQGTTDGL*MCSVSF
Trigger: AAAGCTAACGGAACACATCCAAAGACCATCAGTCGT...GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGACTTTGGCAGTGATTaGAGAAGTATCCGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGDFGSD*RSIRVQ
Trigger: CTGAACCCGGATACTTCTCCAATCACTGCCAAAGTC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGACTTTGGCAGTGATTaGAGAAGTATCCGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFDFGSD*RSIRVQ
Trigger: CTGAACCCGGATACTTCTCCAATCACTGCCAAAGTC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGACTTTGGCAGTGATTaGAGAAGTATCCGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDDFGSD*RSIRVQ
Trigger: CTGAACCCGGATACTTCTCCAATCACTGCCAAAGTC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTTTTTGCTTAATGCTTaGTGTTTCAGGTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQFLLNA*CFRSVI
Trigger: GATCACCGACCTGAAACACCAAGCATTAAGCAAAAA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCACTGTGATTCTTACTaGAGCATCTGTGAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFHCDSY*SICECS
Trigger: TGAGCACTCACAGATGCTCCAGTAAGAATCACAGTG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAGTAGCAGAGTGAAGTaGCTATCAAGGAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSSSRVK*LSRRLR
Trigger: TCTCAGTCTCCTTGATAGCCACTTCACTCTGCTACT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCATAGCATAAACTCTTaGCCTCCTTCATGCACTCAT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRHSINS*PPSCTH
Trigger: ATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGGCCTCTTTCCCTGCTaGTTGCAAAAATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFGLFPC*LQKFFH
Trigger: GTGGAAGAATTTTTGCAACCAGCAGGGAAAGAGGCC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATGGCCAGAAAGCTGTaGAGCAAGGTAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHMARKL*SKVGGP
Trigger: TGGGCCTCCTACCTTGCTCCACAGCTTTCTGGCCAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGGGAGCTATGCCCTTaGTATTGCACACAGTACACT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFRELCP*YCTQYT
Trigger: AGTGTACTGTGTGCAATACCAAGGGCATAGCTCCCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGGGAGCTATGCCCTTaGTATTGCACACAGTACACT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGRELCP*YCTQYT
Trigger: AGTGTACTGTGTGCAATACCAAGGGCATAGCTCCCT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTTCCCTGTCTCTCTCTaGTTTAGGTGTCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSFPVSL*FRCLLK
Trigger: CTTGAGAAGACACCTAAACCAGAGAGAGACAGGGAA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTAAAATGGTTTCAAACTaGGAGCTGTACACGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPKMVSN*ELYTSV
Trigger: CACCGACGTGTACAGCTCCCAGTTTGAAACCATTTT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAGTGTTGTCCAAAATaGTTTCAAACTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVKCCPK*FQTGSC
Trigger: ACAGCTCCCAGTTTGAAACCATTTTGGACAACACTT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAGCCTTCAATTTGGTaGTCCACAAGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVKPSIW*STRKNV
Trigger: CACATTCTTTCTTGTGGACCACCAAATTGAAGGCTT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGCTAAAGCAGGGGAAGTaGCATTTGAAACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKLKQGK*HLKPRL
Trigger: CAGCCTGGGTTTCAAATGCCACTTCCCCTGCTTTAG...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAATACCTGAGTGACTaGTCCAGCGTCATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFKYLSD*SSVIPV
Trigger: TACAGGAATGACGCTGGATCAGTCACTCAGGTATTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGAAAGAAATACCTGAGTaGCTGATCCAGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWKEIPE*LIQRHS
Trigger: GGAATGACGCTGGATCAGTCACTCAGGTATTTCTTT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAATGGACTCCATCTTGTaGAGCAATGGTATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGMDSIL*SNGIWV
Trigger: AACCCAGATACCATTGCTTCACAAGATGGAGTCCAT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLADLQ*TPDRSS
Trigger: AGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGCAGCATTTGGATCATaGGGAATGTCCAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAAAFGS*GMSKNG
Trigger: CCCATTTTTGGACATTCCTCATGATCCAAATGCTGC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GCCTCGCTTTCATCGTTACTCAGTAGCTCTTTGCCTCCTTCCTTGAGAATGCTGCCATCCATATCTGCATaGATTTTCCGAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: ASLSSLLSSSLPPSLRMLPSISA*IFRAKN
Trigger: ATTCTTGGCTCGGAAAATTCATGCAGATATGGATGG...CAGCATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAACGATGAAAGCGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCAGCTGCCACACAATTaGTTTTGTTTATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPQLPHN*FCLSTL
Trigger: AAGGGTGGATAAACAAAATCAATTGTGTGGCAGCTG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCGGCTAAACTTCTTCTaGGAGCCGATTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRLNFF*EPIAAG
Trigger: TCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATTTACCCCTTGCAGATTTGCAATGAACTCCTGACAGGTCATCTTCTTTCCAATCGGCCAGCTCGGTGGTaGTCTGCTTCAGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: IYPLQICNELLTGHLLSNRPARW*SASAYF
Trigger: AAAGTAAGCTGAAGCAGATCACCACCGAGCTGGCCG...ATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCCCTATTTTGCTCCATaGCCAGCACTTCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTPYFAP*PALPGR
Trigger: GCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCCAGTAATTAAGTTTTaGTTGCTAATGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQPVIKF*LLMRNP
Trigger: GGGATTCCTCATTAGCAATCAAAACTTAATTACTGG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCCAGTAATTAAGTTTTaGTTGCTAATGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVPVIKF*LLMRNP
Trigger: GGGATTCCTCATTAGCAATCAAAACTTAATTACTGG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAAAGAGTGCAGCTCATaGCAAGCAGGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLKECSS*QAGPAS
Trigger: AGAGGCAGGGCCTGCTTGTCATGAGCTGCACTCTTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGACTCACTGCTGAAATaGAGAGAGGTGGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCDSLLK*REVAPN
Trigger: GTTGGGAGCCACCTCTCTTCATTTCAGCAGTGAGTC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGGGATGACTCACTGCTaGAATGAAGAGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCGMTHC*NEERWL
Trigger: GAGCCACCTCTCTTCATTTCAGCAGTGAGTCATCCC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAATCTGCCTGCAAAGCTaGCTTACCATTTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGICLQS*LTIFCQ
Trigger: CTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGAT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAACCAGCTGATGAGATaGGATGGCGTGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCNQLMR*DGVALW
Trigger: CCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATACACTCAGGATATCCTaGTGTCCTCCCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHTLRIS*CPPPDV
Trigger: GACATCAGGGGGAGGACATCAGGATATCCTGAGTGT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCCACAAGAAAGAATGTaGTATGGATCCCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRPQERM*YGSPHL
Trigger: TAAATGAGGGGATCCATATCACATTCTTTCTTGTGG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGAGAGCTGCTGCTTGTaGATTACAAGAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWESCCL*ITRKPS
Trigger: TGAAGGCTTTCTTGTAATTCACAAGCAGCAGCTCTC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTACCTCGCTGTTGTTGCTaGTGGAAAAGTGCTCAACTG +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLPRCCC*WKSAQL
Trigger: CAGTTGAGCACTTTTCCATCAGCAACAACAGCGAGG...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCCTCTTTGCAGAGATaGTGTGTTATCACCACTCTC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSSLQR*CVITTL
Trigger: GAGAGTGGTGATAACACATCATCTCTGCAAAGAGGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGGGGAAGTGGCATTTaGAACCCAGGCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIRGSGI*NPGCPC
Trigger: GCAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGCAATAGAACTGAAATaGTTGGTGGAGAAAACTTTG +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVAIELK*LVEKTL
Trigger: CAAAGTTTTCTCCACCAATCATTTCAGTTCTATTGC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTCTATACATATCAGATaGCTCACTTGTCTACAAGGT +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVSIHIR*LTCLQG
Trigger: ACCTTGTAGACAAGTGAGTCATCTGATATGTATAGA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp CCATGTAGATCGGTATTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCAGGCCAACCTTTTGGCTaGTTCCACATTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PCRSVLRSIIAQVRQWTPGQPFG*FHIAAG
Trigger: ACCAGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCC...TGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTACCCCTTGCAGATTTaGAATGAACTCCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFYPLQI*NELLTG
Trigger: ACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp TGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCCTTTCCATCCATATCTaGATGAATTTTCCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: CQCVVHTHSVFQVLFRQGLSIHI*MNFPSQ
Trigger: TTGGCTCGGAAAATTCATGCAGATATGGATGGAAAG...GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGATGCCAATGCGTGGTaGACACTCACAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLDANAW*TLTAFF
Trigger: GAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGGCCTTGGATGCCAATaGGTGGTGCACACTCACAGC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTGLGCQ*VVHTHS
Trigger: GCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCTGAGAGCCGATTGCTaGTGGAAATGGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLRADC*WKWWCR
Trigger: TCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GTCGGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTCTGAGAGCCGATTGCTaGTGGAAATGGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VGSFKFKHVWFLLIVRGLLRADC*WKWWCR
Trigger: TCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAG...AAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGAGGCCTCTTTCCCTaGTGGTTGCAAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFRGLFP*WLQKFF
Trigger: GAAGAATTTTTGCAACCAGCAGGGAAAGAGGCCTCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATGACAAGCAGGCCCTaGCTCTCATCCTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHMTSRP*LSSFPD
Trigger: ATCTGGGAAGGATGAGAGGCAGGGCCTGCTTGTCAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTACCATACACTGATATaGAATCTACACACTGATGCA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVYHTLI*NLHTDA
Trigger: TGCATCAGTGTGTAGATTGCATATCAGTGTATGGTA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTTGCACACAGTACACTaGAAAAGATTCACAAGGTTA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLHTVH*KRFTRL
Trigger: TAACCTTGTGAATCTTTTGCAGTGTACTGTGTGCAA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCTATGCCCTTGGTATTaGACACAGTACACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPLCPWY*TQYTAK
Trigger: TTTTGCAGTGTACTGTGTGCAATACCAAGGGCATAG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAATTACAGGGAGCTATaGCCTTGGTATTGCACACAG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFNYREL*PWYCTQ
Trigger: CTGTGTGCAATACCAAGGGCATAGCTCCCTGTAATT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAATTACAGGGAGCTATaGCCTTGGTATTGCACACAG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGNYREL*PWYCTQ
Trigger: CTGTGTGCAATACCAAGGGCATAGCTCCCTGTAATT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGAGGCTGGACACCCTaGTGCTCTTGTGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTRGWTP*CSCGWH
Trigger: ATGCCACCCACAAGAGCAGCAGGGTGTCCAGCCTCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGGCGTCCCATGGAGCTaGTTCGATCACATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMGVPWS*FDHIPL
Trigger: CAGGGGGATGTGATCGAAGCAGCTCCATGGGACGCC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTGGAGAGGCTGTTCTTTaGAGTGATGTCTCAAAATCT +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFGEAVL*SDVSKS
Trigger: AGATTTTGAGACATCACTGCAAAGAACAGCCTCTCC...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAAAGCAATCTCCGGGGTaGCTTTCGTGTAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLKQSPG*LSCRWS
Trigger: ACTCCATCTACACGAAAGGCACCCCGGAGATTGCTT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGCTAATTTCTGCAACTaGAAACCTAGGATACAGTAC +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRANFCN*KPRIQY
Trigger: GTACTGTATCCTAGGTTTGCAGTTGCAGAAATTAGC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCCTCACCCGTACCTTaGTGGCACTCTGGACACTAT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSSPVP*WHSGHY
Trigger: ATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTAATCTTGGCTACGGCTaGAAAAGCCACCACCGGTGG +
Preference number: 4 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFNLGYG*KSHHRW
Trigger: CCACCGGTGGTGGCTTTTGCAGCCGTAGCCAAGATT...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGTTTGGCCAACCTTTTaGCTGCTTCCACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLVWPTF*LLPHCC
Trigger: GCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAAC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAGACAAGGCCTTTTCTaGCTTGTATTCATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTERQGLF*LVFILL
Trigger: CAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCAGACAAGGCCTTTTCTaGCTTGTATTCATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CQCVVHTHSVFQVLFRQGRQGLF*LVFILL
Trigger: CAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCT...GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp ATTTACCCCTTGCAGATTTGCAATGAACTCCTGACAGGTCATCTTCTTTCCAATCATAGTCCGTGGCCTTaGATGCCAATGCGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: IYPLQICNELLTGHLLSNHSPWP*MPMRGA
Trigger: TGCACCACGCATTGGCATCCAAGGCCACGGACTATG...ATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCATAGTCCGTGGCCTTaGATGCCAATGCGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIHSPWP*MPMRGA
Trigger: TGCACCACGCATTGGCATCCAAGGCCACGGACTATG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCTTCCTGGCCGCAGATaGACTCTAAGTAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVLPGRR*TLSNFL
Trigger: CAAAAAGTTACTTAGAGTCCATCTGCGGCCAGGAAG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTTCCTGGCCGCAGATaGACTCTAAGTAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLPGRR*TLSNFL
Trigger: CAAAAAGTTACTTAGAGTCCATCTGCGGCCAGGAAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTATGACCAGCACTTCCTaGCCGCAGATGGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCMTSTS*PQMDSK
Trigger: CTTAGAGTCCATCTGCGGCCAGGAAGTGCTGGTCAT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQASSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAAATGTGGTTGGCTATaGGCCAGACTCTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGKCGWL*ARLSES
Trigger: AGATTCTGAGAGTCTGGCCCATAGCCAACCACATTT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAAAGGAAAATGTGGTTaGCTATGGGCCAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDKGKCG*LWARLS
Trigger: TGAGAGTCTGGCCCATAGCCAACCACATTTTCCTTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGGCGACGGAGGTGGGTaGCGTACCTTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMGDGGG*RTFRGK
Trigger: CTTTCCTCTGAAGGTACGCCACCCACCTCCGTCGCC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATGGCCAGAAAGCTGTaGAGCAAGGTAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIMARKL*SKVGGP
Trigger: TGGGCCTCCTACCTTGCTCCACAGCTTTCTGGCCAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCATGTGGCAGAGCAGTaGCATGGCCTGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGHVAEQ*HGLGDK
Trigger: CTTGTCTCCCAGGCCATGCCACTGCTCTGCCACATG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRRLPT*VLDTVG
Trigger: ACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGATGATCACTAGTATCTaGAGCTTTCCCTTCAGATCT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRMITSI*SFPFRS
Trigger: AGATCTGAAGGGAAAGCTCCAGATACTAGTGATCAT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTCCACCTTCCTCCATaGTCCCATATTCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLHLPP*SHILEI
Trigger: AATTTCCAGAATATGGGACCATGGAGGAAGGTGGAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTAGAAACAGCATCTTaGTCCAGTACCTTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLETAS*SSTFVA
Trigger: GGCTACAAAGGTACTGGACCAAGATGCTGTTTCTAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACTAGAAACAGCATCTTaGTCCAGTACCTTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLETAS*SSTFVA
Trigger: GGCTACAAAGGTACTGGACCAAGATGCTGTTTCTAG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGCCAAAGGACAAGATaGCTCCTGCACACAGACAGC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGQRTR*LLHTDS
Trigger: GCTGTCTGTGTGCAGGAGCCATCTTGTCCTTTGGCC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAGATGGCGTGGCACTTTaGAAGACTCTTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLDGVAL*KTLCCQ
Trigger: CTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATC...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTTCCCTGTCTCTCTCTaGTTTAGGTGTCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWFPVSL*FRCLLK
Trigger: CTTGAGAAGACACCTAAACCAGAGAGAGACAGGGAA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTTTGCAGGGGACATATaGCACCAGGACTGCAATAGA +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKFAGDI*HQDCNR
Trigger: TCTATTGCAGTCCTGGTGCCATATGTCCCCTGCAAA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGCTTTCCAATATTATCTaGGACAGGTCTACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DANAWCTLTAFFKSSSDKLSNII*DRSTFR
Trigger: CCTGAAGGTAGACCTGTCCCAGATAATATTGGAAAG...CTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CAA 72 bp AGTGCTCCTACAGGAAGTGCCTCCTTGTTTCTTCACTaGTACTCCTCTCTCAAAGGAATGATCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SAPTGSASLFLH*YSSLKGMICRA
Trigger: TGCTCTGCAGATCATTCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGTAGGAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 72 bp ACAAGGCACATCAGTGCTCCTACAGGAAGTGCCTCCTaGTTTCTTCACTTGTACTCCTCTCTCAAAGGAATG +
Preference number: 4 (lower is better)
Translates to: TRHISAPTGSAS*FLHLYSSLKGM
Trigger: CATTCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGTAGGAGCACTGATGTGCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 72 bp GCACTTCCTGGCCGCAGATGGACTCTAAGTAACTTTTaGCTTAATGCTTGGTGTTTCAGGTCGGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: ALPGRRWTLSNF*LNAWCFRSVIL
Trigger: AAGGATCACCGACCTGAAACACCAAGCATTAAGCAAAAAGTTACTTAGAGTCCATCTGCGGCCAGGAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATGCTGGTACCATTACTaGGATTTTCTGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLCWYHY*DFLGSP
Trigger: AGGAGACCCCAGAAAATCTCAGTAATGGTACCAGCA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp CAGATAGTGGTCTTTCAGTTTGTACTCATCGACGTCCTTGGCTTTGACCTTCTTTGCTGGTACCATTACTaGGATTTTCTGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QIVVFQFVLIDVLGFDLLCWYHY*DFLGSP
Trigger: AGGAGACCCCAGAAAATCTCAGTAATGGTACCAGCA...AAGAAGGTCAAAGCCAAGGACGTCGATGAGTACAAACTGAAAGACCACTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTGTGTTTTGCAACATCTaGTCTTTTGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFVFCNI*SFESVQ
Trigger: CTGGACAGATTCAAAAGATCAGATGTTGCAAAACAC...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATACTTCCAATACGACTaGTGGTCTTTGGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGYFQYD*WSLDVF
Trigger: GAACACATCCAAAGACCATCAGTCGTATTGGAAGTA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCCATCCATATCTGCATaGATTTTCCGAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFPSISA*IFRAKN
Trigger: ATTCTTGGCTCGGAAAATTCATGCAGATATGGATGG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCGGCTAAACTTCTTCTaGGAGCCGATTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRLNFF*EPIAAG
Trigger: TCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCGGCCAGCTCGGTGGTaGTCTGCTTCAGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGRPARW*SASAYF
Trigger: AAAGTAAGCTGAAGCAGATCACCACCGAGCTGGCCG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLVILPL*HVTLDF
Trigger: AAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCAC...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGGTGTTTCAGGTCGGTaGTCCTTCCTCTCTGACACG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGGVSGR*SFLSDT
Trigger: CGTGTCAGAGAGGAAGGATCACCGACCTGAAACACC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDSILPL*LGKISH
Trigger: ATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACTACAAAAATCAATCTaGTACATGGGCCATATTGGT +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTELQKSI*YMGHIG
Trigger: ACCAATATGGCCCATGTATCAGATTGATTTTTGTAG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCCTTCATGCACTCATaGCAGACAGCAACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSFMHS*QTATFR
Trigger: TCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTGCTCCCTTGTACCGTaGATTGGGCAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGCSLVP*IGQQAW
Trigger: CCAAGCCTGTTGCCCAATTCACGGTACAAGGGAGCA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAAAAGAGTGCAGCTCATaGCAAGCAGGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRKECSS*QAGPAS
Trigger: AGAGGCAGGGCCTGCTTGTCATGAGCTGCACTCTTT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATGGAAAGAAATTTGCTaGCATGTGGCAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLWKEIC*HVAEQW
Trigger: CCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTCCTTCCTTTATGGATaGGAGATGGAAAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFSFLYG*EMEKES
Trigger: AGATTCCTTTTCCATCTCTCATCCATAAAGGAAGGA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGGTAAACTTTGTTCCTTaGGATGACTTTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKVNFVP*DDFERG
Trigger: CCCCCTCTCAAAGTCATCTCAAGGAACAAAGTTTAC...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACAGGGAGCGTTTTGTTaGCTCTCTGTGTTTTACGAC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLQGAFC*LSVFYD
Trigger: GTCGTAAAACACAGAGAGTCAACAAAACGCTCCCTG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTAGTATTTCCACTCCTTaGAATTCCACATGTTTGACC +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPSISTP*NSTCLT
Trigger: GGTCAAACATGTGGAATTTCAAGGAGTGGAAATACT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAACCAGCTGATGAGATaGGATGGCGTGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGINQLMR*DGVALW
Trigger: CCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGTCCTCTCCAAGAACTaGCCACCTTCTTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCVLSKN*PPSLMR
Trigger: GCGCATTAAAGAAGGTGGTCAGTTCTTGGAGAGGAC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGGAGAGCTGCTGCTTGTaGATTACAAGAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKESCCL*ITRKPS
Trigger: TGAAGGCTTTCTTGTAATTCACAAGCAGCAGCTCTC...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAGAGAATCTTTGTCATaGCGTTTGTTCATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQARESLS*RLFMCH
Trigger: GTGGCACATGAACAAACGTCATGACAAAGATTCTCT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGAGAATCTTTGTCATaGCGTTTGTTCATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDRESLS*RLFMCH
Trigger: GTGGCACATGAACAAACGTCATGACAAAGATTCTCT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGTATTTCACGGAACCTaGGGTCCTCACCCGTACCTT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIVFHGT*GPHPYL
Trigger: AAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATAC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATGGACTTTGACCTGTaGGACTGCCGCCGGATAGAA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIMDFDL*DCRRIE
Trigger: TTCTATCCGGCGGCAGTCTCACAGGTCAAAGTCCAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGGCCAACCTTTTGGCTaGTTCCACATTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLGQPFG*FHIAAG
Trigger: ACCAGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTCTCTTCATCATCTACTaGCCATTCAAGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSLFIIY*PFKLLI
Trigger: AATGAGAAGCTTGAATGGGCAGTAGATGATGAAGAG...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCTTTCCATCCATATCTaGATGAATTTTCCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFLSIHI*MNFPSQ
Trigger: TTGGCTCGGAAAATTCATGCAGATATGGATGGAAAG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCTGAGAGCCGATTGCTaGTGGAAATGGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLRADC*WKWWCR
Trigger: TCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCACGCTTCTTTTCCCTaGTTCCAGCAGGGTCCGATC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTHASFP*FQQGPI
Trigger: GATCGGACCCTGCTGGAAGCAGGGAAAAGAAGCGTG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGCACATGCCTACTGCTaGAGCTCCTCAAGGGCCGAT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMAHAYC*SSSRAD
Trigger: ATCGGCCCTTGAGGAGCTGCAGCAGTAGGCATGTGC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTGCAGACTGAGCACATaGCTACTGCTGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGCRLST*LLLQLL
Trigger: GAGGAGCTGCAGCAGTAGGCATGTGCTCAGTCTGCA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGAGGGTCTTGTGTTTaGCACAAGACCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCRGSCV*HKTTAP
Trigger: TGGTGCAGTGGTCTTGTGGCAAACACAAGACCCTCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTATTCAGGATGCAACATaGTTAACTGATGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSIQDAT*LTDDCK
Trigger: CTTGCAGTCATCAGTTAAGCATGTTGCATCCTGAAT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGACATTCTCTCTGCATaGAATGGGCCAATTATTGTC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFDILSA*NGPIIV
Trigger: GACAATAATTGGCCCATTGCATGCAGAGAGAATGTC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAAATTTTCCTGCTGTTaGATTCAAGTCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQKFSCC*IQVKLS
Trigger: TGACAGTTTGACTTGAATGCAACAGCAGGAAAATTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTATGCCCTTGGTATTaGACACAGTACACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLCPWY*TQYTAK
Trigger: TTTTGCAGTGTACTGTGTGCAATACCAAGGGCATAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTATGCCCTTGGTATTaGACACAGTACACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFLCPWY*TQYTAK
Trigger: TTTTGCAGTGTACTGTGTGCAATACCAAGGGCATAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGAAACCAACACTGCCTaGAGAGTGGCAGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNETNTA*RVAGHC
Trigger: GCAGTGACCTGCCACTCTGCAGGCAGTGTTGGTTTC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCACATCCCCCTGGGTaGTCTCTCCCAAGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSHPPG*SLPRAD
Trigger: GTCTGCTCTTGGGAGAGAGCACCCAGGGGGATGTGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTCAAAATCTATAGGATaGTGGGTCTCTCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSSKSIG*WVSLLS
Trigger: AGACAAGAGAGAGACCCAGCATCCTATAGATTTTGA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGGAGAGGCTGTTCTTTaGAGTGATGTCTCAAAATCT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFGEAVL*SDVSKS
Trigger: AGATTTTGAGACATCACTGCAAAGAACAGCCTCTCC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAATAGCCCATCACGATaGCACCATCTGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHNSPSR*HHLQTH
Trigger: GTGTGTCTGCAGATGGTGGCATCGTGATGGGCTATT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGGCAAAACTAAGACCCTaGCAATCATTCACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKAKLRP*QSFTEP
Trigger: TGGCTCTGTGAATGATTGGCAGGGTCTTAGTTTTGC...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGAGGACTAACCACATaGATGGTTACCCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGRGLTT*MVTLNG
Trigger: TCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCCCTGCAAAGGGAAATaGATTTTAGTTCGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFPCKGK*ILVRFL
Trigger: AAGGAACCGAACTAAAATGCATTTCCCTTTGCAGGG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCTTAGCTCTCTGCCCTaGAAAGGGAAATGCATTTTA +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWLSSLP*KGKCIL
Trigger: TAAAATGCATTTCCCTTTGCAGGGCAGAGAGCTAAG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTCTTAGCTCTCTGCCCTaGAAAGGGAAATGCATTTTA +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQALSSLP*KGKCIL
Trigger: TAAAATGCATTTCCCTTTGCAGGGCAGAGAGCTAAG...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCCTCACCCGTACCTTaGTGGCACTCTGGACACTAT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISSPVP*WHSGHY
Trigger: ATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATTGGTGGGAGTAAAGTaGTTCCTCCATGATCACCGA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLVGVK*FLHDHR
Trigger: TCGGTGATCATGGAGGAAGCACTTTACTCCCACCAA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523619.5
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGCTGATAAAGGCGTTTaGCCAACCTTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLADKGV*PTFWLL
Trigger: AAGCAGCCAAAAGGTTGGCCAAACGCCTTTATCAGC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCATCTTGTGAAGCAATaGTATCTGGGTTACAATAAA +
Preference number: 4 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVHLVKQ*YLGYNK
Trigger: TTTATTGTAACCCAGATACCATTGCTTCACAAGATG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTACGACTGATGGTCTTTaGATGTGTTCCGTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVTTDGL*MCSVSF
Trigger: AAAGCTAACGGAACACATCCAAAGACCATCAGTCGT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCACGACTGATGGTCTTTaGATGTGTTCCGTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFTTDGL*MCSVSF
Trigger: AAAGCTAACGGAACACATCCAAAGACCATCAGTCGT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQRNVQK*VSSTSN
Trigger: ATTGGAAGTACTACTAACCCATTTTTGGACATTCCT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCTTCTCATAGTCCGTaGCCTTGGATGCCAATGCGT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSSHSP*PWMPMR
Trigger: ACGCATTGGCATCCAAGGCCACGGACTATGAGAAGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAGAGCCGATTGCTGCTaGAAATGGTGGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLRADCC*KWWCRK
Trigger: TTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATGACCAGCACTTCCTaGCCGCAGATGGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIMTSTS*PQMDSK
Trigger: CTTAGAGTCCATCTGCGGCCAGGAAGTGCTGGTCAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTATGACCAGCACTTCCTaGCCGCAGATGGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFMTSTS*PQMDSK
Trigger: CTTAGAGTCCATCTGCGGCCAGGAAGTGCTGGTCAT...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGATGACCAGCACTTCCTaGCCGCAGATGGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLMTSTS*PQMDSK
Trigger: CTTAGAGTCCATCTGCGGCCAGGAAGTGCTGGTCAT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCATAGCATAAACTCTTaGCCTCCTTCATGCACTCAT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDHSINS*PPSCTH
Trigger: ATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTATCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGCCAGCATGCGAGGTaGGGACAAACCCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSQHAR*GQTPKI
Trigger: AATTTTAGGGGTTTGTCCCCACCTCGCATGCTGGCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFRSSVA*PQGEIQ
Trigger: TTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAGGCCTCTTTCCCTGCTaGTTGCAAAAATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLGLFPC*LQKFFH
Trigger: GTGGAAGAATTTTTGCAACCAGCAGGGAAAGAGGCC...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCTTAGGATGCCACTTTaGTTCTTTGTTTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPLRMPL*FFVLQC
Trigger: GCACTGTAAAACAAAGAACCAAAGTGGCATCCTAAG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTATGGCCAGAAAGCTGTaGAGCAAGGTAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTMARKL*SKVGGP
Trigger: TGGGCCTCCTACCTTGCTCCACAGCTTTCTGGCCAT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGCAGTGGCATGGCCTaGGAGACAAGATGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSSGMA*ETRWPE
Trigger: TTCTGGCCATCTTGTCTCCCAGGCCATGCCACTGCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCATTCATATTTGGCCTTaGCAACACTCTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFIHIWP*QHSGNV
Trigger: CACATTCCCAGAGTGTTGCCAAGGCCAAATATGAAT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCTCTTGTGGGTGGCATaGCAGAGCCTCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLLWVA*QSLTIK
Trigger: TTTGATGGTGAGGCTCTGCCATGCCACCCACAAGAG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTCTTGTGGGTGGCATaGCAGAGCCTCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILLWVA*QSLTIK
Trigger: TTTGATGGTGAGGCTCTGCCATGCCACCCACAAGAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAAATCAAAGAGTCAATaGGCTGTAAACTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQKSKSQ*AVNFVP
Trigger: AGGAACAAAGTTTACAGCCCATTGACTCTTTGATTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAAATCTATAGGATGCTaGGTCTCTCTCTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGKSIGC*VSLLSP
Trigger: AGGAGACAAGAGAGAGACCCAGCATCCTATAGATTT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATGCCTTTCGTGTAGATaGAGTCGCTGGCATCATTCA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLCLSCR*SRWHHS
Trigger: TGAATGATGCCAGCGACTCCATCTACACGAAAGGCA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATACAGTACCCAATCCTaGGATGCCCTGATATACTTT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGYSTQS*DALIYF
Trigger: AAAGTATATCAGGGCATCCCAGGATTGGGTACTGTA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCATGGTTACCCTAAATaGAAAGCAACCACTTTACTG +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPHGYPK*KATTLL
Trigger: CAGTAAAGTGGTTGCTTTCCATTTAGGGTAACCATG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGAGAAAGCCTTCAATTTaGTGGTCCACAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRRKPSI*WSTRKN
Trigger: ATTCTTTCTTGTGGACCACCAAATTGAAGGCTTTCT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTACCTTGCTGGCACTCTaGACACTATTCACGCCAATC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCTLLAL*TLFTPI
Trigger: GATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCTCCCCATTTCAGAATaGGCTTCTAGCCGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLPISE*ASSRVV
Trigger: AACAACACGGCTAGAAGCTCATTCTGAAATGGGGAG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTGCTGGTACCATTACTaGGATTTTCTGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHCWYHY*DFLGSP
Trigger: AGGAGACCCCAGAAAATCTCAGTAATGGTACCAGCA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GCCTCGCTTTCATCGTTACTCAGTAGCTCTTTGCCTCCTTCCTTGAGAATGCTGCAACATCTGATCTTTTaGATCTGTCCAGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: ASLSSLLSSSLPPSLRMLQHLIF*ICPADK
Trigger: TTTATCAGCTGGACAGATTCAAAAGATCAGATGTTG...CAGCATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAACGATGAAAGCGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGTGTTTTGCAACATCTaGTCTTTTGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAVFCNI*SFESVQ
Trigger: CTGGACAGATTCAAAAGATCAGATGTTGCAAAACAC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAAAGAAATACCTGAGTaGCTGATCCAGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLKEIPE*LIQRHS
Trigger: GGAATGACGCTGGATCAGTCACTCAGGTATTTCTTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHTLSRS*VSPTRE
Trigger: CTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGCAGCATTTGGATCATaGGGAATGTCCAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLAAFGS*GMSKNG
Trigger: CCCATTTTTGGACATTCCTCATGATCCAAATGCTGC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATACGACTGATGGTCTTTGGATGTGTTCCGTTAGCTTTCTCCTCAGTACTTTCTGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: IRLMVFGCVPLAFSSVLSVILPL*HVTLDF
Trigger: AAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCAC...AGAAAGTACTGAGGAGAAAGCTAACGGAACACATCCAAAGACCATCAGTCGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp TCTGACACGTTACGCTTGACTTTGGCAGTGATTGGAGAAGTATCCGGGTTCAGCTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SDTLRLTLAVIGEVSGFSLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...GCTGAACCCGGATACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGACAATTCCTGCAGACTaGGCACATGCCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGTIPAD*AHAYCC
Trigger: GCAGCAGTAGGCATGTGCTCAGTCTGCAGGAATTGT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGGCTTGGAGCAGCTGTaGAAGGAAACATCCTCAATT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCGLEQL*KETSSI
Trigger: AATTGAGGATGTTTCCTTTCACAGCTGCTCCAAGCC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTGGCTCCCAACCTGCTaGAAACTCGACCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMWLPTC*KLDQVH
Trigger: GTGGACTTGGTCGAGTTTTCAGCAGGTTGGGAGCCA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGGGATGACTCACTGCTaGAATGAAGAGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNGMTHC*NEERWL
Trigger: GAGCCACCTCTCTTCATTTCAGCAGTGAGTCATCCC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTATGACATTCTCTCTATaGAGACATTCTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAMTFSL*RHSLCM
Trigger: CATGCAGAGAGAATGTCTTCATAGAGAGAATGTCAT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAACATGTACCATACACTaGTATGCAATCTACACACTG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGTCTIH*YAIYTL
Trigger: CAGTGTGTAGATTGCATATCAGTGTATGGTACATGT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCACATGTACCATACACTaGTATGCAATCTACACACTG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFTCTIH*YAIYTL
Trigger: CAGTGTGTAGATTGCATATCAGTGTATGGTACATGT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCATTCACAAGGTTAGTTaGAAGTCATTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFIHKVS*KSFLPW
Trigger: CCAGGGCAAAAATGACTTTCAACTAACCTTGTGAAT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCTGGAAATTCATTTGTaGCATTTGGTGGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWLEIHL*HLVGVK
Trigger: CTTTACTCCCACCAAATGTCACAAATGAATTTCCAG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGTAATGTTCCGGAAATaGTTCTGGCTTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLVMFRK*FWLLWL
Trigger: AAGCCACAGAAGCCAGAATCATTTCCGGAACATTAC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTCTTTTTCCACCTGCTaGACTGAAAAACTAGAAACA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFSFSTC*TEKLET
Trigger: TGTTTCTAGTTTTTCAGTTCAGCAGGTGGAAAAAGA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCAGGGAGCGTTTTGTTaGCTCTCTGTGTTTTACGAC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCQGAFC*LSVFYD
Trigger: GTCGTAAAACACAGAGAGTCAACAAAACGCTCCCTG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGTATTTCCACTCCTTaGAATTCCACATGTTTGACC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSISTP*NSTCLT
Trigger: GGTCAAACATGTGGAATTTCAAGGAGTGGAAATACT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGTCCTCTCCAAGAACTaGCCACCTTCTTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLVLSKN*PPSLMR
Trigger: GCGCATTAAAGAAGGTGGTCAGTTCTTGGAGAGGAC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCTGATGTCCTCCCCCTaGTGTCCTCTCCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLMSSP*CPLQEL
Trigger: CAGTTCTTGGAGAGGACATCAGGGGGAGGACATCAG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTACACTCAGGATATCCTaGTGTCCTCCCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTTLRIS*CPPPDV
Trigger: GACATCAGGGGGAGGACATCAGGATATCCTGAGTGT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGACAATTCAAACTCTCTaGATCAGCTACAAAGACACG +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWTIQTL*ISYKDT
Trigger: CGTGTCTTTGTAGCTGATTCAGAGAGTTTGAATTGT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTTGGAAAACATCTGTaGTGCAGTTTCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILGKHL*CSFHPL
Trigger: GAGGGGGTGGAAACTGCATCACAGATGTTTTCCAAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTGCAATAGAACTGAAATaGTTGGTGGAGAAAACTTTG +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFAIELK*LVEKTL
Trigger: CAAAGTTTTCTCCACCAATCATTTCAGTTCTATTGC...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAATTTTCATGGACTTTaGCCTGTGAGACTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGINFHGL*PVRLPP
Trigger: CGGCGGCAGTCTCACAGGTCAAAGTCCATGAAAATT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTTCTCATTCTTGATTaGGTTGTACAGAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFLLILD*VVQSLV
Trigger: AACAAGGCTCTGTACAACTCAATCAAGAATGAGAAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTTTTCCAAAATTTCAGTaGTCCCCATTTCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPFPKFQ*SPFQNE
Trigger: CTCATTCTGAAATGGGGAGCACTGAAATTTTGGAAA...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGGCCAACCTTTTGGCTaGTTCCACATTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTGQPFG*FHIAAG
Trigger: ACCAGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGGCCAACCTTTTGGCTaGTTCCACATTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGGQPFG*FHIAAG
Trigger: ACCAGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCCTTTTCTGGCTTGTATTACCCCTTGCAGATTTaGAATGAACTCCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: TLTAFFKSSSDKAFSGLYYPLQI*NELLTG
Trigger: ACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTA...ATACAAGCCAGAAAAGGCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTCTTCATCATCTACTaGCCATTCAAGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLFIIY*PFKLLI
Trigger: AATGAGAAGCTTGAATGGGCAGTAGATGATGAAGAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACTCTTCATCATCTACTaGCCATTCAAGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLFIIY*PFKLLI
Trigger: AATGAGAAGCTTGAATGGGCAGTAGATGATGAAGAG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCTGAGAGCCGATTGCTaGTGGAAATGGTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLRADC*WKWWCR
Trigger: TCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCGACTTCTTCAGTCCTaGAGCCTCGCTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIRLLQS*SLAFIV
Trigger: AACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTCG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCTGTATGGTCAATTTTaGAACAACACTATGACCAAG +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPLYGQF*NNTMTK
Trigger: CTTGGTCATAGTGTTGTTGCAAAATTGACCATACAG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAGGGTCTTGTGTTTaGCACAAGACCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRGSCV*HKTTAP
Trigger: TGGTGCAGTGGTCTTGTGGCAAACACAAGACCCTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTCTTTCCCTGCTGGTTaGAAAAATTCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWSFPAG*KNSSTI
Trigger: GATTGTGGAAGAATTTTTGCAACCAGCAGGGAAAGA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCTTTCCCTGCTGGTTaGAAAAATTCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSFPAG*KNSSTI
Trigger: GATTGTGGAAGAATTTTTGCAACCAGCAGGGAAAGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAGAGGCCTCTTTCCCTaGTGGTTGCAAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLRGLFP*WLQKFF
Trigger: GAAGAATTTTTGCAACCAGCAGGGAAAGAGGCCTCT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGATGACAAGCAGGCCCTaGCTCTCATCCTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGMTSRP*LSSFPD
Trigger: ATCTGGGAAGGATGAGAGGCAGGGCCTGCTTGTCAT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAATTCAGGATGCAACATaGTTAACTGATGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGIQDAT*LTDDCK
Trigger: CTTGCAGTCATCAGTTAAGCATGTTGCATCCTGAAT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCATTCAGGATGCAACATaGTTAACTGATGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFIQDAT*LTDDCK
Trigger: CTTGCAGTCATCAGTTAAGCATGTTGCATCCTGAAT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGAGGCGCATCTGCCTaGAAAGCTGACTTACCATTT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCRGASA*KADLPF
Trigger: AAATGGTAAGTCAGCTTTGCAGGCAGATGCGCCTCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGGACATTCTCTCTGCATaGAATGGGCCAATTATTGTC +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKDILSA*NGPIIV
Trigger: GACAATAATTGGCCCATTGCATGCAGAGAGAATGTC...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTACCATACACTGATATaGAATCTACACACTGATGCA +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSYHTLI*NLHTDA
Trigger: TGCATCAGTGTGTAGATTGCATATCAGTGTATGGTA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGAAACCAACACTGCCTaGAGAGTGGCAGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMETNTA*RVAGHC
Trigger: GCAGTGACCTGCCACTCTGCAGGCAGTGTTGGTTTC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCTTCCCCCTTAACGTaGTCCTCTTGTTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSSPLT*SSCSLI
Trigger: GATCAGCGAACAAGAGGAGCACGTTAAGGGGGAAGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCACGATGCCACCATCTaGAGACACACTCAGGATATC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLHDATI*RHTQDI
Trigger: GATATCCTGAGTGTGTCTGCAGATGGTGGCATCGTG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGCTAATTTCTGCAACTaGAAACCTAGGATACAGTAC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGANFCN*KPRIQY
Trigger: GTACTGTATCCTAGGTTTGCAGTTGCAGAAATTAGC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTTAAACAAAAGACACTaGACTCAGCCACTCACTCAA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFLNKRH*TQPLTQ
Trigger: TTGAGTGAGTGGCTGAGTGCAGTGTCTTTTGTTTAA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGACAAGGCACATCAGTaGTCCTACAGGAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNDKAHQ*SYRKCL
Trigger: GAGGCACTTCCTGTAGGAGCACTGATGTGCCTTGTC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGCTCGGTGGTGATCTaGTTCAGCTTACTTTCATCC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSSVVI*FSLLSS
Trigger: GGATGAAAGTAAGCTGAAGCAGATCACCACCGAGCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGCTGATAAAGGCGTTTaGCCAACCTTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHADKGV*PTFWLL
Trigger: AAGCAGCCAAAAGGTTGGCCAAACGCCTTTATCAGC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGCACAGGTAAGGCAATaGACTCCATCTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCAQVRQ*TPSCEA
Trigger: TGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGGTATCTGCACAGGTAAGGCAATaGACTCCATCTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SIIAQVRQWTPSCEAMVSAQVRQ*TPSCEA
Trigger: TGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGC...AGATACCATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAGACAAGGCCTTTTCTaGCTTGTATTCATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFRQGLF*LVFILL
Trigger: CAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGACAAGGCCTTTTCTaGCTTGTATTCATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDRQGLF*LVFILL
Trigger: CAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTTTGGATGCCAATGCGTaGTGCACACTCACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFLDANA*CTLTAF
Trigger: AAACGCTGTGAGTGTGCACCACGCATTGGCATCCAA...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCATAGTCCGTGGCCTTaGATGCCAATGCGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMHSPWP*MPMRGA
Trigger: TGCACCACGCATTGGCATCCAAGGCCACGGACTATG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCTTCTCATAGTCCGTaGCCTTGGATGCCAATGCGT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISSHSP*PWMPMR
Trigger: ACGCATTGGCATCCAAGGCCACGGACTATGAGAAGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAAGTTTAAACACGTTTaGTTTCTTCTCATAGTCCGT +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTEKFKHV*FLLIVR
Trigger: ACGGACTATGAGAAGAAACCAAACGTGTTTAAACTT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGAGCCGATTGCTGCTaGAAATGGTGGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRADCC*KWWCRK
Trigger: TTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGACTTTGGCAGTGATTaGAGAAGTATCCGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHDFGSD*RSIRVQ
Trigger: CTGAACCCGGATACTTCTCCAATCACTGCCAAAGTC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTTTTTGCTTAATGCTTaGTGTTTCAGGTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFFLLNA*CFRSVI
Trigger: GATCACCGACCTGAAACACCAAGCATTAAGCAAAAA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 4 (lower is better)
Translates to: ETAGRWLGLYLTALIWTENQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCCTTGTACCGTGAATTaGGCAACAGGCTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNPCTVN*ATGLEQ
Trigger: CTGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGCCAGCATGCGAGGTaGGGACAAACCCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSQHAR*GQTPKI
Trigger: AATTTTAGGGGTTTGTCCCCACCTCGCATGCTGGCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGCCTCTTTCCCTGCTaGTTGCAAAAATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGLFPC*LQKFFH
Trigger: GTGGAAGAATTTTTGCAACCAGCAGGGAAAGAGGCC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACTTAGGATGCCACTTTaGTTCTTTGTTTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLRMPL*FFVLQC
Trigger: GCACTGTAAAACAAAGAACCAAAGTGGCATCCTAAG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGAAGGCTGCCCACGTaGGTTCTGGATACTGTAGGT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGRRLPT*VLDTVG
Trigger: ACCTACAGTATCCAGAACCCACGTGGGCAGCCTTCT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGGGAGCTATGCCCTTaGTATTGCACACAGTACACT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCRELCP*YCTQYT
Trigger: AGTGTACTGTGTGCAATACCAAGGGCATAGCTCCCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGGGAGCTATGCCCTTaGTATTGCACACAGTACACT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRELCP*YCTQYT
Trigger: AGTGTACTGTGTGCAATACCAAGGGCATAGCTCCCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTATGATCACTAGTATCTaGAGCTTTCCCTTCAGATCT +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVMITSI*SFPFRS
Trigger: AGATCTGAAGGGAAAGCTCCAGATACTAGTGATCAT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTACTCCACCTTCCTCCATaGTCCCATATTCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLLHLPP*SHILEI
Trigger: AATTTCCAGAATATGGGACCATGGAGGAAGGTGGAG...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGAAATCTATAGGATGCTaGGTCTCTCTCTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKKSIGC*VSLLSP
Trigger: AGGAGACAAGAGAGAGACCCAGCATCCTATAGATTT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGATGGCGTGGCACTTTaGAAGACTCTTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIDGVAL*KTLCCQ
Trigger: CTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGATGGCGTGGCACTTTaGAAGACTCTTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLDGVAL*KTLCCQ
Trigger: CTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAAGTGTTGTCCAAAATaGTTTCAAACTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAKCCPK*FQTGSC
Trigger: ACAGCTCCCAGTTTGAAACCATTTTGGACAACACTT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTGTAGATGGAGTCGCTaGCATCATTCAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGICRWSR*HHSAHW
Trigger: CCAATGGGCTGAATGATGCCAGCGACTCCATCTACA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGCTACGGAGAGATGCTaGAGAGCTGCTGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGATERC*RAAACE
Trigger: TTCACAAGCAGCAGCTCTCCAGCATCTCTCCGTAGC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCTGAAGACTTATTTATaGCGACCGATGGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFLKTYL*RPMGKY
Trigger: ATATTTTCCCATCGGTCGCCATAAATAAGTCTTCAG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTCAGACCTGCAGTGTaGTCCTTAATCGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLRPAV*SLIEPW
Trigger: CCAAGGCTCGATTAAGGACCACACTGCAGGTCTGAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTGCTGGTACCATTACTaGGATTTTCTGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLCWYHY*DFLGSP
Trigger: AGGAGACCCCAGAAAATCTCAGTAATGGTACCAGCA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGTGCTGGTACCATTACTaGGATTTTCTGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMCWYHY*DFLGSP
Trigger: AGGAGACCCCAGAAAATCTCAGTAATGGTACCAGCA...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCAACATCTGATCTTTTaGATCTGTCCAGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFQHLIF*ICPADK
Trigger: TTTATCAGCTGGACAGATTCAAAAGATCAGATGTTG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAAATACCTGAGTGACTaGTCCAGCGTCATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHKYLSD*SSVIPV
Trigger: TACAGGAATGACGCTGGATCAGTCACTCAGGTATTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GTCGGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTAAAGAAATACCTGAGTaGCTGATCCAGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: VGSFKFKHVWFLLIVRGLKEIPE*LIQRHS
Trigger: GGAATGACGCTGGATCAGTCACTCAGGTATTTCTTT...AAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMTLSRS*VSPTRE
Trigger: CTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGT...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR TCA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFTLSRS*VSPTRE
Trigger: CTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGT...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATGGACTCCATCTTGTaGAGCAATGGTATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHMDSIL*SNGIWV
Trigger: AACCCAGATACCATTGCTTCACAAGATGGAGTCCAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGGTATCTATGGACTCCATCTTGTaGAGCAATGGTATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SIIAQVRQWTPSCEAMVSMDSIL*SNGIWV
Trigger: AACCCAGATACCATTGCTTCACAAGATGGAGTCCAT...AGATACCATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTATGGACTCCATCTTGTaGAGCAATGGTATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCMDSIL*SNGIWV
Trigger: AACCCAGATACCATTGCTTCACAAGATGGAGTCCAT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTATTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLFAMNS*QVIFFP
Trigger: TGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAA...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATACTTCCAATACGACTaGTGGTCTTTGGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLYFQYD*WSLDVF
Trigger: GAACACATCCAAAGACCATCAGTCGTATTGGAAGTA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGCAGCATTTGGATCATaGGGAATGTCCAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHAAFGS*GMSKNG
Trigger: CCCATTTTTGGACATTCCTCATGATCCAAATGCTGC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIVILPL*HVTLDF
Trigger: AAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCAC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLVILPL*HVTLDF
Trigger: AAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCAC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQALPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGTGCTAAGCTGCACATaGAGCTGCCTCATATTGGAG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGVLSCT*SCLILE
Trigger: CTCCAATATGAGGCAGCTTCATGTGCAGCTTAGCAC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCTEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCATGCTACGGCAGTCTaGGATCCTGGCTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMHATAV*DPGSQK
Trigger: CTTTTGTGAGCCAGGATCTCAGACTGCCGTAGCATG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATCTGCCTGCAAAGCTaGCTTACCATTTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHICLQS*LTIFCQ
Trigger: CTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCATTTTTGCCCTGGTaGTTCAAAGCTCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFSFLPW*FKAQRI
Trigger: AATTCTTTGAGCTTTGAATCACCAGGGCAAAAATGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAACAGTCAACTGGTTCTaGATCTCAGGAGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRTVNWF*ISGGED
Trigger: GTCCTCTCCTCCTGAGATTCAGAACCAGTTGACTGT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCTTCTAGGAGCGCCTaGAGACTTATTTATGGCGAC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSSRSA*RLIYGD
Trigger: GTCGCCATAAATAAGTCTTCAGGCGCTCCTAGAAGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGGTATCTATTTTCCTGAGTGACTaGTCCAGCGTCATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SIIAQVRQWTPSCEAMVSIFLSD*SSVIPV
Trigger: TACAGGAATGACGCTGGATCAGTCACTCAGGAAAAT...AGATACCATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR TCA 90 bp CCATGTAGATCGGTATTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCAATTCATTTTCCTGAGTaGCTGATCCAGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: PCRSVLRSIIAQVRQWTPIHFPE*LIQRHS
Trigger: GGAATGACGCTGGATCAGTCACTCAGGAAAATGAAT...TGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR TCA 90 bp AGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGGTATCTGTAGATTCATTTTCCTaGGTGACTGATCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: SIIAQVRQWTPSCEAMVSVDSFS*VTDPAS
Trigger: TGACGCTGGATCAGTCACTCAGGAAAATGAATCTAC...AGATACCATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTTTTCACCCCAGCATTaGAGCAACCATACAGACACC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLFSPQH*SNHTDT
Trigger: GGTGTCTGTATGGTTGCTGCAATGCTGGGGTGAAAA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000286485.12
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGATGCCAATGCGTGGTaGACACTCACAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGDANAW*TLTAFF
Trigger: GAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGCTCGGTGGTGATCTaGTTCAGCTTACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSSVVI*FSLLSC
Trigger: ACATGAAAGTAAGCTGAAGCAGATCACCACCGAGCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCGACTTCTTCAGTCCTaGAGCCTCGCTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGRLLQS*SLAFIV
Trigger: AACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTCG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCATAAACTTAGTTACTaGCTTTACCCAAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDHKLSY*LYPNKA
Trigger: TGCCTTGTTTGGGTAAAGGCAGTAACTAAGTTTATG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGATGGACAGCATCATaGTACGGCAGTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTRWTAS*YGSLRS
Trigger: GGATCTCAGACTGCCGTAGCATGATGCTGTCCATCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGGTGTTCTCAGCCCATaGGCTAAAGATGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTGVLSP*AKDGQH
Trigger: ATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTGTATGGTCAATTTTaGAACAACACTATGACCAAG +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFLYGQF*NNTMTK
Trigger: CTTGGTCATAGTGTTGTTGCAAAATTGACCATACAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCCTCATGTCACTTTTaGCCAGGGGCCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSSCHF*PGASPH
Trigger: ATGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGAGGCCTCTTTCCCTaGTGGTTGCAAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRGLFP*WLQKFF
Trigger: GAAGAATTTTTGCAACCAGCAGGGAAAGAGGCCTCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGATGACAAGCAGGCCCTaGCTCTCATCCTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMMTSRP*LSSFPD
Trigger: ATCTGGGAAGGATGAGAGGCAGGGCCTGCTTGTCAT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAGGCGCATCTGCCTaGAAAGCTGACTTACCATTT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRGASA*KADLPF
Trigger: AAATGGTAAGTCAGCTTTGCAGGCAGATGCGCCTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATTGCACACAGTACACTaGAAAAGATTCACAAGGTTA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLHTVH*KRFTRL
Trigger: TAACCTTGTGAATCTTTTGCAGTGTACTGTGTGCAA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTTGCACACAGTACACTaGAAAAGATTCACAAGGTTA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLHTVH*KRFTRL
Trigger: TAACCTTGTGAATCTTTTGCAGTGTACTGTGTGCAA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACTATGCCCTTGGTATTaGACACAGTACACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLCPWY*TQYTAK
Trigger: TTTTGCAGTGTACTGTGTGCAATACCAAGGGCATAG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAAATGTCTCTGCCGCTaGGCTCCTTCCTTCCATCTT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNKCLCR*APSFHL
Trigger: AAGATGGAAGGAAGGAGCGCAGCGGCAGAGACATTT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATCAAGAAACCAACACTaGCTGCAGAGTGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSRNQH*LQSGRS
Trigger: TGACCTGCCACTCTGCAGGCAGTGTTGGTTTCTTGA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTCAAGAAACCAACACTaGCTGCAGAGTGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSRNQH*LQSGRS
Trigger: TGACCTGCCACTCTGCAGGCAGTGTTGGTTTCTTGA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTTTGGAAGACTCTTTaGTGTCAGGAGAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILWKTL*CQERLF
Trigger: GAACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGTGAGCCTCAGACCTaGAGTGTGGTCCTTAATCGA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSEPQT*SVVLNR
Trigger: TCGATTAAGGACCACACTGCAGGTCTGAGGCTCACT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp CCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTTCCCTTCAGTAGCTCCTCTTCCTTCTTaGCTCAAAGATCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PFLACIHPFASKELFPSVAPLPS*LKDPEP
Trigger: AGGCTCAGGATCTTTGAGGCAAGAAGGAAGAGGAGC...TACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGCTGATAAAGGCGTTTaGCCAACCTTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIADKGV*PTFWLL
Trigger: AAGCAGCCAAAAGGTTGGCCAAACGCCTTTATCAGC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCATCTTGTGAAGCAATaGTATCTGGGTTACAATAAA +
Preference number: 4 (lower is better)
Translates to: VIFLPSQASTDAAPREWFHLVKQ*YLGYNK
Trigger: TTTATTGTAACCCAGATACCATTGCTTCACAAGATG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGCACAGGTAAGGCAATaGACTCCATCTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLAQVRQ*TPSCEA
Trigger: TGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAACGACTGATGGTCTTTaGATGTGTTCCGTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLTTDGL*MCSVSF
Trigger: AAAGCTAACGGAACACATCCAAAGACCATCAGTCGT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCCTCGCTTTCATCGTTACTCAGTAGCTCTTTGCCTCCTTCCTTGAGAATGCTGAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ASLSSLLSSSLPPSLRMLRNVQK*VSSTSN
Trigger: ATTGGAAGTACTACTAACCCATTTTTGGACATTCCT...CAGCATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAACGATGAAAGCGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTTGGATGCCAATGCGTaGTGCACACTCACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLDANA*CTLTAF
Trigger: AAACGCTGTGAGTGTGCACCACGCATTGGCATCCAA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTAAGTTTAAACACGTTTaGTTTCTTCTCATAGTCCGT +
Preference number: 4 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPKFKHV*FLLIVR
Trigger: ACGGACTATGAGAAGAAACCAAACGTGTTTAAACTT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGACTTTGGCAGTGATTaGAGAAGTATCCGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIDFGSD*RSIRVQ
Trigger: CTGAACCCGGATACTTCTCCAATCACTGCCAAAGTC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAATGGGTTAGTAGTACTTCCAATACGACTGATGGTCTTTGGATGTGTTCCGGACTTTGGCAGTGATTaGAGAAGTATCCGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: KNGLVVLPIRLMVFGCVPDFGSD*RSIRVQ
Trigger: CTGAACCCGGATACTTCTCCAATCACTGCCAAAGTC...CGGAACACATCCAAAGACCATCAGTCGTATTGGAAGTACTACTAACCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGATGACCAGCACTTCCTaGCCGCAGATGGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMMTSTS*PQMDSK
Trigger: CTTAGAGTCCATCTGCGGCCAGGAAGTGCTGGTCAT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCACTGTGATTCTTACTaGAGCATCTGTGAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHHCDSY*SICECS
Trigger: TGAGCACTCACAGATGCTCCAGTAAGAATCACAGTG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGGGTAAGCCTTCTCTaGGCAATAGTCATGGACATT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGVSLL*AIVMDI
Trigger: AATGTCCATGACTATTGCCCAGAGAAGGCTTACCCC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGCAGTCTGAGATCCTaGCTCACAAAAGAACCTTTA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGSLRS*LTKEPL
Trigger: TAAAGGTTCTTTTGTGAGCCAGGATCTCAGACTGCC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGGCAGTCTGAGATCCTaGCTCACAAAAGAACCTTTA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCGSLRS*LTKEPL
Trigger: TAAAGGTTCTTTTGTGAGCCAGGATCTCAGACTGCC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAAGGAAAATGTGGTTaGCTATGGGCCAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKGKCG*LWARLS
Trigger: TGAGAGTCTGGCCCATAGCCAACCACATTTTCCTTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGCCAGCATGCGAGGTaGGGACAAACCCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSQHAR*GQTPKI
Trigger: AATTTTAGGGGTTTGTCCCCACCTCGCATGCTGGCT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGCCAGCATGCGAGGTaGGGACAAACCCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSQHAR*GQTPKI
Trigger: AATTTTAGGGGTTTGTCCCCACCTCGCATGCTGGCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGGCCTCTTTCCCTGCTaGTTGCAAAAATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIGLFPC*LQKFFH
Trigger: GTGGAAGAATTTTTGCAACCAGCAGGGAAAGAGGCC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAAGGAGAATGCCTTTaGATTTCAGTCCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFKGECL*ISVLPL
Trigger: TAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTAAAGGAGAATGCCTTTaGATTTCAGTCCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SLPKTANADSFAIEKEQAKGECL*ISVLPL
Trigger: TAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTT...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAAAGGAGAATGCCTTTaGATTTCAGTCCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGKGECL*ISVLPL
Trigger: TAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGGGAGCTATGCCCTTaGTATTGCACACAGTACACT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIRELCP*YCTQYT
Trigger: AGTGTACTGTGTGCAATACCAAGGGCATAGCTCCCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGCTGATGAGATGAGATaGCGTGGCACTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGADEMR*RGTLED
Trigger: GTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAAAATGGTTTCAAACTaGGAGCTGTACACGTCGGTG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHKMVSN*ELYTSV
Trigger: CACCGACGTGTACAGCTCCCAGTTTGAAACCATTTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAAATGGTTTCAAACTaGGAGCTGTACACGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKMVSN*ELYTSV
Trigger: CACCGACGTGTACAGCTCCCAGTTTGAAACCATTTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGAAGCCTTCAATTTGGTaGTCCACAAGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKKPSIW*STRKNV
Trigger: CACATTCTTTCTTGTGGACCACCAAATTGAAGGCTT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGCTACGGAGAGATGCTaGAGAGCTGCTGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMATERC*RAAACE
Trigger: TTCACAAGCAGCAGCTCTCCAGCATCTCTCCGTAGC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTACCTTGCTGGCACTCTaGACACTATTCACGCCAATC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTTLLAL*TLFTPI
Trigger: GATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTCACCCGTACCTTGCTaGCACTCTGGACACTATTCA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSPVPC*HSGHYS
Trigger: TGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
3UTR CAA 72 bp GCAGGCTGCTATTTTGTCACTAATTACTTTCACAATTaGCAGGGGACATATGGCACCAGGACTGCAATAGAA +
Preference number: 4 (lower is better)
Translates to: AGCYFVTNYFHN*QGTYGTRTAIE
Trigger: TTCTATTGCAGTCCTGGTGCCATATGTCCCCTGCAAATTGTGAAAGTAATTAGTGACAAAATAGCAGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 72 bp TTCTTGATTGAGTTGTACAGAGCTTTCAGCAGATCCTaGGAGAAATCAACACCCTCATTTACCCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FLIELYRAFSRS*EKSTPSFTPCR
Trigger: TCTGCAAGGGGTAAATGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGCTCTGTACAACTCAATCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCTCCCCATTTCAGAATaGGCTTCTAGCCGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLPISE*ASSRVV
Trigger: AACAACACGGCTAGAAGCTCATTCTGAAATGGGGAG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTGCTGGTACCATTACTaGGATTTTCTGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTCWYHY*DFLGSP
Trigger: AGGAGACCCCAGAAAATCTCAGTAATGGTACCAGCA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGTGTTTTGCAACATCTaGTCTTTTGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLVFCNI*SFESVQ
Trigger: CTGGACAGATTCAAAAGATCAGATGTTGCAAAACAC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAAATACCTGAGTGACTaGTCCAGCGTCATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIKYLSD*SSVIPV
Trigger: TACAGGAATGACGCTGGATCAGTCACTCAGGTATTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTAAATACCTGAGTGACTaGTCCAGCGTCATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFKYLSD*SSVIPV
Trigger: TACAGGAATGACGCTGGATCAGTCACTCAGGTATTT...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTTLSRS*VSPTRE
Trigger: CTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGTLSRS*VSPTRE
Trigger: CTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATGGACTCCATCTTGTaGAGCAATGGTATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIMDSIL*SNGIWV
Trigger: AACCCAGATACCATTGCTTCACAAGATGGAGTCCAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCFAMNS*QVIFFP
Trigger: TGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATTTACCCCTTGCAGATTTGCAATGAACTCCTGACAGGTCATCTTCTTTCCAATCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: IYPLQICNELLTGHLLSNLADLQ*TPDRSS
Trigger: AGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAG...ATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGCAGCATTTGGATCATaGGGAATGTCCAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIAAFGS*GMSKNG
Trigger: CCCATTTTTGGACATTCCTCATGATCCAAATGCTGC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCCATCCATATCTGCATaGATTTTCCGAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCPSISA*IFRAKN
Trigger: ATTCTTGGCTCGGAAAATTCATGCAGATATGGATGG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCCATCCATATCTGCATaGATTTTCCGAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHPSISA*IFRAKN
Trigger: ATTCTTGGCTCGGAAAATTCATGCAGATATGGATGG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCAGCTGCCACACAATTaGTTTTGTTTATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCQLPHN*FCLSTL
Trigger: AAGGGTGGATAAACAAAATCAATTGTGTGGCAGCTG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATACGACTGATGGTCTTTGGATGTGTTCCGTTAGCTTTCTCCTCAGTACTTTCTCAGCTGCCACACAATTaGTTTTGTTTATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: IRLMVFGCVPLAFSSVLSQLPHN*FCLSTL
Trigger: AAGGGTGGATAAACAAAATCAATTGTGTGGCAGCTG...AGAAAGTACTGAGGAGAAAGCTAACGGAACACATCCAAAGACCATCAGTCGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGVILPL*HVTLDF
Trigger: AAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCAC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGTGATCCTTCCTCTCTaGCACGTTACGCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRVILPL*HVTLDF
Trigger: AAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCAC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCACTGAAGCTTGTAGATaGCATGGTCTAGGTACCTCT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGITEACR*HGLGTS
Trigger: AGAGGTACCTAGACCATGTCATCTACAAGCTTCAGT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGCCAGTAATTAAGTTTTaGTTGCTAATGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKPVIKF*LLMRNP
Trigger: GGGATTCCTCATTAGCAATCAAAACTTAATTACTGG...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCCTTCCTTTATGGATaGGAGATGGAAAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSFLYG*EMEKES
Trigger: AGATTCCTTTTCCATCTCTCATCCATAAAGGAAGGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAATGACATTCTCTCTATaGAGACATTCTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLMTFSL*RHSLCM
Trigger: CATGCAGAGAGAATGTCTTCATAGAGAGAATGTCAT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGTAATGTTCCGGAAATaGTTCTGGCTTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIVMFRK*FWLLWL
Trigger: AAGCCACAGAAGCCAGAATCATTTCCGGAACATTAC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCAGGGAGCGTTTTGTTaGCTCTCTGTGTTTTACGAC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTQGAFC*LSVFYD
Trigger: GTCGTAAAACACAGAGAGTCAACAAAACGCTCCCTG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCACCACGAGAGTGGTTTaGTCTCCCGTAAAACATACA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGITTRVV*SPVKHT
Trigger: TGTATGTTTTACGGGAGATCAAACCACTCTCGTGGT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATCTTCTAGGAGCGCCTaGAGACTTATTTATGGCGAC +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSSRSA*RLIYGD
Trigger: GTCGCCATAAATAAGTCTTCAGGCGCTCCTAGAAGA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAATTTTCATGGACTTTaGCCTGTGAGACTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMNFHGL*PVRLPP
Trigger: CGGCGGCAGTCTCACAGGTCAAAGTCCATGAAAATT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCGTAGTCTGTGATCTCTaGGGACAGGTGCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLVVCDL*GQVPIW
Trigger: CCAAATGGGCACCTGTCCTCAGAGATCACAGACTAC...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR GCA 90 bp TATTGGAGAAGTGTATTAAAACTCTCTCTCGTTCTTGAGTTTCTCCCACAAGAGTTTTCACCCCAGCATTaGAGCAACCATACAGACACC +
Preference number: 4 (lower is better)
Translates to: YWRSVLKLSLVLEFLPQEFSPQH*SNHTDT
Trigger: GGTGTCTGTATGGTTGCTGCAATGCTGGGGTGAAAA...CTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACACTTCTCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR GCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCGGCCAACCTTTTGGCTaGTTCCACATTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLGQPFG*FHIAAG
Trigger: ACCAGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCC...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTACCCCTTGCAGATTTaGAATGAACTCCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLYPLQI*NELLTG
Trigger: ACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp CAGATAGTGGTCTTTCAGTTTGTACTCATCGACGTCCTTGGCTTTGACCTTCTTCTCTTCATCATCTACTaGCCATTCAAGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: QIVVFQFVLIDVLGFDLLLFIIY*PFKLLI
Trigger: AATGAGAAGCTTGAATGGGCAGTAGATGATGAAGAG...AAGAAGGTCAAAGCCAAGGACGTCGATGAGTACAAACTGAAAGACCACTATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGATGCCAATGCGTGGTaGACACTCACAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMDANAW*TLTAFF
Trigger: GAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCGACTTCTTCAGTCCTaGAGCCTCGCTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRLLQS*SLAFIV
Trigger: AACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTCG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATTCCATCGTGGACAACTaGAGCTACGTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNSIVDN*SYVFLP
Trigger: AGGAAGGAAAACGTAGCTGCAGTTGTCCACGATGGA...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAATTCACTGGAACCATaGTATTCCTGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCNSLEP*YSCRAA
Trigger: AGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAATTCACTGGAACCATaGTATTCCTGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHNSLEP*YSCRAA
Trigger: AGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNSALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGAGGGTCTTGTGTTTaGCACAAGACCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRGSCV*HKTTAP
Trigger: TGGTGCAGTGGTCTTGTGGCAAACACAAGACCCTCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCTTTCCCTGCTGGTTaGAAAAATTCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSFPAG*KNSSTI
Trigger: GATTGTGGAAGAATTTTTGCAACCAGCAGGGAAAGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTATCTTTCCCTGCTGGTTaGAAAAATTCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLSFPAG*KNSSTI
Trigger: GATTGTGGAAGAATTTTTGCAACCAGCAGGGAAAGA...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAATTCAGGATGCAACATaGTTAACTGATGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLIQDAT*LTDDCK
Trigger: CTTGCAGTCATCAGTTAAGCATGTTGCATCCTGAAT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAGAGGCGCATCTGCCTaGAAAGCTGACTTACCATTT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNRGASA*KADLPF
Trigger: AAATGGTAAGTCAGCTTTGCAGGCAGATGCGCCTCT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATTTGATCATGTAAGATaGTATAAGACTGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGFDHVR*YKTGGK
Trigger: CTTTCCACCAGTCTTATAGCATCTTACATGATCAAA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTTTTGATCATGTAAGATaGTATAAGACTGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVFDHVR*YKTGGK
Trigger: CTTTCCACCAGTCTTATAGCATCTTACATGATCAAA...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGACATTCTCTCTGCATaGAATGGGCCAATTATTGTC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHDILSA*NGPIIV
Trigger: GACAATAATTGGCCCATTGCATGCAGAGAGAATGTC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAAATTTTCCTGCTGTTaGATTCAAGTCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDKFSCC*IQVKLS
Trigger: TGACAGTTTGACTTGAATGCAACAGCAGGAAAATTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGAAATTTTCCTGCTGTTaGATTCAAGTCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWKFSCC*IQVKLS
Trigger: TGACAGTTTGACTTGAATGCAACAGCAGGAAAATTT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCTTGCAAAATTTTCCTaGTGTTGCATTCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWLAKFS*CCIQVK
Trigger: TTTGACTTGAATGCAACAGCAGGAAAATTTTGCAAG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTTGCAAAATTTTCCTaGTGTTGCATTCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: CGWLWARLSESRQISDCFLAKFS*CCIQVK
Trigger: TTTGACTTGAATGCAACAGCAGGAAAATTTTGCAAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACTTGCAAAATTTTCCTaGTGTTGCATTCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLAKFS*CCIQVK
Trigger: TTTGACTTGAATGCAACAGCAGGAAAATTTTGCAAG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTTGCAAAATTTTCCTaGTGTTGCATTCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDLAKFS*CCIQVK
Trigger: TTTGACTTGAATGCAACAGCAGGAAAATTTTGCAAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTACCATACACTGATATaGAATCTACACACTGATGCA +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKYHTLI*NLHTDA
Trigger: TGCATCAGTGTGTAGATTGCATATCAGTGTATGGTA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCTATGCCCTTGGTATTaGACACAGTACACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLCPWY*TQYTAK
Trigger: TTTTGCAGTGTACTGTGTGCAATACCAAGGGCATAG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAATTACAGGGAGCTATaGCCTTGGTATTGCACACAG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLNYREL*PWYCTQ
Trigger: CTGTGTGCAATACCAAGGGCATAGCTCCCTGTAATT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCTTTGGAAGACTCTTTaGTGTCAGGAGAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLWKTL*CQERLF
Trigger: GAACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAAAGAGCTTAGCTCTCTaGCCTGCAAAGGGAAATGCA +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRKSLAL*PAKGNA
Trigger: TGCATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGTTTGGCCAACCTTTTaGCTGCTTCCACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMVWPTF*LLPHCC
Trigger: GCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAAC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATCTATTGGAGAAGTGTATTAAAACTCTCTCTCGTTCTTGAGTTTCTCCCACAAGTTTGGCCAACCTTTTaGCTGCTTCCACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: IYWRSVLKLSLVLEFLPQVWPTF*LLPHCC
Trigger: GCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAAC...TTGTGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACACTTCTCCAATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CCA 90 bp TATTGGAGAAGTGTATTAAAACTCTCTCTCGTTCTTGAGTTTCTCCCACAAGAGGCTGATAAAGGCGTTTaGCCAACCTTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: YWRSVLKLSLVLEFLPQEADKGV*PTFWLL
Trigger: AAGCAGCCAAAAGGTTGGCCAAACGCCTTTATCAGC...CTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACACTTCTCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CCA 90 bp CCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTTCCCTTCAGTAGCTGATAAAGGCGTTTaGCCAACCTTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PFLACIHPFASKELFPSVADKGV*PTFWLL
Trigger: AAGCAGCCAAAAGGTTGGCCAAACGCCTTTATCAGC...TACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGCACAGGTAAGGCAATaGACTCCATCTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGAQVRQ*TPSCEA
Trigger: TGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATTCTTTCCAATATTGTaGCCATGTAGATCGGTATTA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGFFPIL*PCRSVL
Trigger: TAATACCGATCTACATGGCCACAATATTGGAAAGAA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000523619.5
CDS-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTTCTTTCCAATATTGTaGCCATGTAGATCGGTATTA +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWFFPIL*PCRSVL
Trigger: TAATACCGATCTACATGGCCACAATATTGGAAAGAA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327040.13
CDS-3UTR CCA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVRNVQK*VSSTSN
Trigger: ATTGGAAGTACTACTAACCCATTTTTGGACATTCCT...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTTGGATGCCAATGCGTaGTGCACACTCACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLDANA*CTLTAF
Trigger: AAACGCTGTGAGTGTGCACCACGCATTGGCATCCAA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGAGCCGATTGCTGCTaGAAATGGTGGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGRADCC*KWWCRK
Trigger: TTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTTCCCTTCAGTAAGAGCCGATTGCTGCTaGAAATGGTGGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: PFLACIHPFASKELFPSVRADCC*KWWCRK
Trigger: TTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCT...TACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTCTTCCTGGCCGCAGATaGACTCTAAGTAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFLPGRR*TLSNFL
Trigger: CAAAAAGTTACTTAGAGTCCATCTGCGGCCAGGAAG...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTTCCTGGCCGCAGATaGACTCTAAGTAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILPGRR*TLSNFL
Trigger: CAAAAAGTTACTTAGAGTCCATCTGCGGCCAGGAAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCACTGTGATTCTTACTaGAGCATCTGTGAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLHCDSY*SICECS
Trigger: TGAGCACTCACAGATGCTCCAGTAAGAATCACAGTG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 4 (lower is better)
Translates to: YNASQSQTLELRFHPGPWKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGRKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTTTTCTCTAATTCACTaGAACCATGCTATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LGHRVKYKPILALESHPDFSLIH*NHAIPV
Trigger: TACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATAGCATAAACTCTTaGCCTCCTTCATGCACTCAT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHHSINS*PPSCTH
Trigger: ATGAGTGCATGAAGGAGGCCAAGAGTTTATGCTATG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAAATGTGGTTGGCTATaGGCCAGACTCTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLKCGWL*ARLSES
Trigger: AGATTCTGAGAGTCTGGCCCATAGCCAACCACATTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRSSVA*PQGEIQ
Trigger: TTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCRSSVA*PQGEIQ
Trigger: TTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGGCCTCTTTCCCTGCTaGTTGCAAAAATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTGLFPC*LQKFFH
Trigger: GTGGAAGAATTTTTGCAACCAGCAGGGAAAGAGGCC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGATAAAAATTCATATTTaGCCTTGGCAACACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKIKIHI*PWQHSG
Trigger: CCCAGAGTGTTGCCAAGGCCAAATATGAATTTTTAT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGCTGATGAGATGAGATaGCGTGGCACTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMADEMR*RGTLED
Trigger: GTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAAGTGTTGTCCAAAATaGTTTCAAACTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLKCCPK*FQTGSC
Trigger: ACAGCTCCCAGTTTGAAACCATTTTGGACAACACTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATGCCTTTCGTGTAGATaGAGTCGCTGGCATCATTCA +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRCLSCR*SRWHHS
Trigger: TGAATGATGCCAGCGACTCCATCTACACGAAAGGCA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGAGAAAGCCTTCAATTTaGTGGTCCACAAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKRKPSI*WSTRKN
Trigger: ATTCTTTCTTGTGGACCACCAAATTGAAGGCTTTCT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATTTCCAATATTTACGTaGCCATGTAGATCGGTATTA +
Preference number: 4 (lower is better)
Translates to: ILKNPILLHDQHFLAADGFPIFT*PCRSVL
Trigger: TAATACCGATCTACATGGCCACGTAAATATTGGAAA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440756.4
CDS-3UTR CCA 90 bp CCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTTCCCTTCAGTAAAAAGCCACCACCGGTaGCCATGTAGATCGGTATTA +
Preference number: 4 (lower is better)
Translates to: PFLACIHPFASKELFPSVKSHHR*PCRSVL
Trigger: TAATACCGATCTACATGGCCACCGGTGGTGGCTTTT...TACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
3UTR CAA 72 bp CCACAAATACAACAATGGCAGGTGACAGCATTTTCTTaGATGACTGACATACTGCCTGTAAGAATAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PQIQQWQVTAFS*MTDILPVRIVS
Trigger: GGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCACCTGCCATTGTTGTATTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTACAACATCTGATCTTTTaGATCTGTCCAGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLQHLIF*ICPADK
Trigger: TTTATCAGCTGGACAGATTCAAAAGATCAGATGTTG...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGTGTTTTGCAACATCTaGTCTTTTGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHVFCNI*SFESVQ
Trigger: CTGGACAGATTCAAAAGATCAGATGTTGCAAAACAC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTGGAGTGTTTTGCAACATCTaGTCTTTTGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GSFKFKHVWFLLIVRGLGVFCNI*SFESVQ
Trigger: CTGGACAGATTCAAAAGATCAGATGTTGCAAAACAC...TCCAAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAAAGAAATACCTGAGTaGCTGATCCAGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTKEIPE*LIQRHS
Trigger: GGAATGACGCTGGATCAGTCACTCAGGTATTTCTTT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTTTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFFAMNS*QVIFFP
Trigger: TGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAA...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLADLQ*TPDRSS
Trigger: AGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTACTTCCAATACGACTaGTGGTCTTTGGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLYFQYD*WSLDVF
Trigger: GAACACATCCAAAGACCATCAGTCGTATTGGAAGTA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAATGGGTTAGTAGTACTTCCAATACGACTGATGGTCTTTGGATGTGTTCCGTACTTCCAATACGACTaGTGGTCTTTGGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: KNGLVVLPIRLMVFGCVPYFQYD*WSLDVF
Trigger: GAACACATCCAAAGACCATCAGTCGTATTGGAAGTA...CGGAACACATCCAAAGACCATCAGTCGTATTGGAAGTACTACTAACCCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTACTTCCAATACGACTaGTGGTCTTTGGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIYFQYD*WSLDVF
Trigger: GAACACATCCAAAGACCATCAGTCGTATTGGAAGTA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCCATCCATATCTGCATaGATTTTCCGAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIPSISA*IFRAKN
Trigger: ATTCTTGGCTCGGAAAATTCATGCAGATATGGATGG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCCATCCATATCTGCATaGATTTTCCGAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLPSISA*IFRAKN
Trigger: ATTCTTGGCTCGGAAAATTCATGCAGATATGGATGG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCAGCTGCCACACAATTaGTTTTGTTTATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLQLPHN*FCLSTL
Trigger: AAGGGTGGATAAACAAAATCAATTGTGTGGCAGCTG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCAATTCTACCTCTGTaGCTGGGCAAGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSILPL*LGKISH
Trigger: ATGTGAAATCTTGCCCAGTCACAGAGGTAGAATTGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGCCCTTCGTATCCAATaGTCTATTAGCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTALRIQ*SISLSR
Trigger: TCTGGATAGGCTAATAGATCATTGGATACGAAGGGC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCCTTCATGCACTCATaGCAGACAGCAACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSFMHS*QTATFR
Trigger: TCTGAAGGTTGCTGTCTGTCATGAGTGCATGAAGGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTACCAGTAATTAAGTTTTaGTTGCTAATGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLPVIKF*LLMRNP
Trigger: GGGATTCCTCATTAGCAATCAAAACTTAATTACTGG...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGATCTGCCTGCAAAGCTaGCTTACCATTTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGICLQS*LTIFCQ
Trigger: CTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGAT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTGGAAAGAAATTTGCTaGCATGTGGCAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMWKEIC*HVAEQW
Trigger: CCACTGCTCTGCCACATGTCAGCAAATTTCTTTCCA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTATGACATTCTCTCTATaGAGACATTCTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCMTFSL*RHSLCM
Trigger: CATGCAGAGAGAATGTCTTCATAGAGAGAATGTCAT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTATTCACAAGGTTAGTTaGAAGTCATTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCIHKVS*KSFLPW
Trigger: CCAGGGCAAAAATGACTTTCAACTAACCTTGTGAAT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATTCACAAGGTTAGTTaGAAGTCATTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHIHKVS*KSFLPW
Trigger: CCAGGGCAAAAATGACTTTCAACTAACCTTGTGAAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCTGGAAATTCATTTGTaGCATTTGGTGGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLEIHL*HLVGVK
Trigger: CTTTACTCCCACCAAATGTCACAAATGAATTTCCAG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGTAAACTTTGTTCCTTaGGATGACTTTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNVNFVP*DDFERG
Trigger: CCCCCTCTCAAAGTCATCTCAAGGAACAAAGTTTAC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGTAAACTTTGTTCCTTaGGATGACTTTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTVNFVP*DDFERG
Trigger: CCCCCTCTCAAAGTCATCTCAAGGAACAAAGTTTAC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATCCTCTTTGCAGAGATaGTGTGTTATCACCACTCTC +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSSLQR*CVITTL
Trigger: GAGAGTGGTGATAACACATCATCTCTGCAAAGAGGA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCTTTCTCAGTAGTCTGTaGTCTCTGAGGACAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLFLSSL*SLRTGA
Trigger: GGCACCTGTCCTCAGAGATCACAGACTACTGAGAAA...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR GCA 90 bp CAGATAGTGGTCTTTCAGTTTGTACTCATCGACGTCCTTGGCTTTGACCTTCTTATTAAGAAGCATTATTaGACAGGTAAGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: QIVVFQFVLIDVLGFDLLIKKHY*TGKAMD
Trigger: GTCCATTGCCTTACCTGTGCAATAATGCTTCTTAAT...AAGAAGGTCAAAGCCAAGGACGTCGATGAGTACAAACTGAAAGACCACTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATTACCCCTTGCAGATTTaGAATGAACTCCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNYPLQI*NELLTG
Trigger: ACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTA...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTACCCCTTGCAGATTTaGAATGAACTCCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGYPLQI*NELLTG
Trigger: ACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCTTTCCATCCATATCTaGATGAATTTTCCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLSIHI*MNFPSQ
Trigger: TTGGCTCGGAAAATTCATGCAGATATGGATGGAAAG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAGCTCGGTGGTGATCTaGTTCAGCTTACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNSSVVI*FSLLSC
Trigger: ACATGAAAGTAAGCTGAAGCAGATCACCACCGAGCT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGCTCGGTGGTGATCTaGTTCAGCTTACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSSVVI*FSLLSC
Trigger: ACATGAAAGTAAGCTGAAGCAGATCACCACCGAGCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCAAGGGCCGATTATTaGCCCCATCCTTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSRADY*PHPLAN
Trigger: GTTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCTTGGCCTCCTTCATaGACTCATGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSWPPS*THDRQQ
Trigger: TTGCTGTCTGTCATGAGTGCATGAAGGAGGCCAAGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACTGTATGGTCAATTTTaGAACAACACTATGACCAAG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLYGQF*NNTMTK
Trigger: CTTGGTCATAGTGTTGTTGCAAAATTGACCATACAG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGTGCACTTCAGAAATaGCTACGGGCTGGCGATAAA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSALQK*LRAGDK
Trigger: TTTATCGCCAGCCCGTAGGCATTTCTGAAGTGCACT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGAGGCCTCTTTCCCTaGTGGTTGCAAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGRGLFP*WLQKFF
Trigger: GAAGAATTTTTGCAACCAGCAGGGAAAGAGGCCTCT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAATTACAGGGAGCTATaGCCTTGGTATTGCACACAG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTNYREL*PWYCTQ
Trigger: CTGTGTGCAATACCAAGGGCATAGCTCCCTGTAATT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCTACCAACACATTACTaGAGCCTGGAGCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNLPTHY*SLELKL
Trigger: TAACTTCAGCTCCAGGCTGCAGTAATGTGTTGGTAG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTACCAACACATTACTaGAGCCTGGAGCTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLPTHY*SLELKL
Trigger: TAACTTCAGCTCCAGGCTGCAGTAATGTGTTGGTAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATTACTTTCACAATTTaGAGGGGACATATGGCACCA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHITFTI*RGHMAP
Trigger: TGGTGCCATATGTCCCCTGCAAATTGTGAAAGTAAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCGTTTGGCCAACCTTTTaGCTGCTTCCACATTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLVWPTF*LLPHCC
Trigger: GCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAAC...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGAGCCGATTGCTGCTaGAAATGGTGGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRADCC*KWWCRK
Trigger: TTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGACTTTGGCAGTGATTaGAGAAGTATCCGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMDFGSD*RSIRVQ
Trigger: CTGAACCCGGATACTTCTCCAATCACTGCCAAAGTC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTGGATTTTTGCTTAATGCTTaGTGTTTCAGGTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: GSFKFKHVWFLLIVRGLGFLLNA*CFRSVI
Trigger: GATCACCGACCTGAAACACCAAGCATTAAGCAAAAA...TCCAAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTTCCTGGCCGCAGATaGACTCTAAGTAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLPGRR*TLSNFL
Trigger: CAAAAAGTTACTTAGAGTCCATCTGCGGCCAGGAAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCCTCTTTCCCTTGCTTaGCTGAAATGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMPLSLA*LKWNQH
Trigger: GTGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGTAGCAGAGTGAAGTaGCTATCAAGGAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSSRVK*LSRRLR
Trigger: TCTCAGTCTCCTTGATAGCCACTTCACTCTGCTACT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCAAAGGGACTGTAACTaGAACAAGCTCATGACTGCA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGQRDCN*NKLMTA
Trigger: TGCAGTCATGAGCTTGTTCCAGTTACAGTCCCTTTG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGCTCTAGGTCTCAGTaGGCTAAACTTTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSSRSQ*AKLSLL
Trigger: AAGGAGTGAAAGTTTAGCCCACTGAGACCTAGAGCT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTTTTCTCTAATTCACTaGAACCATGCTATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKFSLIH*NHAIPV
Trigger: TACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGGCAGTCTGAGATCCTaGCTCACAAAAGAACCTTTA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTGSLRS*LTKEPL
Trigger: TAAAGGTTCTTTTGTGAGCCAGGATCTCAGACTGCC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAAATGTGGTTGGCTATaGGCCAGACTCTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNKCGWL*ARLSES
Trigger: AGATTCTGAGAGTCTGGCCCATAGCCAACCACATTT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCCCAAAGGAAAATGTaGTTGGCTATGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSQRKM*LAMGQT
Trigger: AGTCTGGCCCATAGCCAACCACATTTTCCTTTGGGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTATCCTCAATTTCTTCTaGCTAGATGCCACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCILNFF*LDATGN
Trigger: ATTTCCTGTGGCATCTAGCCAGAAGAAATTGAGGAT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCATGGGCCACCTGTATaGTCAATTTTGCAACAACAC +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNHGPPV*SILQQH
Trigger: GTGTTGTTGCAAAATTGACCATACAGGTGGCCCATG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIRSSVA*PQGEIQ
Trigger: TTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCTTAGGATGCCACTTTaGTTCTTTGTTTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLRMPL*FFVLQC
Trigger: GCACTGTAAAACAAAGAACCAAAGTGGCATCCTAAG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCTTAGGATGCCACTTTaGTTCTTTGTTTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLRMPL*FFVLQC
Trigger: GCACTGTAAAACAAAGAACCAAAGTGGCATCCTAAG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGGGAGCTATGCCCTTaGTATTGCACACAGTACACT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRELCP*YCTQYT
Trigger: AGTGTACTGTGTGCAATACCAAGGGCATAGCTCCCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCTCCACCTTCCTCCATaGTCCCATATTCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNLHLPP*SHILEI
Trigger: AATTTCCAGAATATGGGACCATGGAGGAAGGTGGAG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTTCCCTGTCTCTCTCTaGTTTAGGTGTCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGFPVSL*FRCLLK
Trigger: CTTGAGAAGACACCTAAACCAGAGAGAGACAGGGAA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGAGAAAGAATGTGATATaGATCCCCTCATTTATGTGT +
Preference number: 4 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKRKNVI*IPSFMC
Trigger: ACACATAAATGAGGGGATCCATATCACATTCTTTCT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp AATATCTATTGGAGAAGTGTATTAAAACTCTCTCTCGTTCTTGAGTTTCTCCCACTCCCCATTTCAGAATaGGCTTCTAGCCGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: NIYWRSVLKLSLVLEFLPLPISE*ASSRVV
Trigger: AACAACACGGCTAGAAGCTCATTCTGAAATGGGGAG...TGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACACTTCTCCAATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCAACATCTGATCTTTTaGATCTGTCCAGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHQHLIF*ICPADK
Trigger: TTTATCAGCTGGACAGATTCAAAAGATCAGATGTTG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGGTGTTTTGCAACATCTaGTCTTTTGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMVFCNI*SFESVQ
Trigger: CTGGACAGATTCAAAAGATCAGATGTTGCAAAACAC...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAAATACCTGAGTGACTaGTCCAGCGTCATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMKYLSD*SSVIPV
Trigger: TACAGGAATGACGCTGGATCAGTCACTCAGGTATTT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLTLSRS*VSPTRE
Trigger: CTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTACTTCCAATACGACTaGTGGTCTTTGGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGYFQYD*WSLDVF
Trigger: GAACACATCCAAAGACCATCAGTCGTATTGGAAGTA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCAGCTGCCACACAATTaGTTTTGTTTATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGQLPHN*FCLSTL
Trigger: AAGGGTGGATAAACAAAATCAATTGTGTGGCAGCTG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCTACAAAAATCAATCTaGTACATGGGCCATATTGGT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLQKSI*YMGHIG
Trigger: ACCAATATGGCCCATGTATCAGATTGATTTTTGTAG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTTTGCAACAACACTATaGCCAAGGCATTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTFATTL*PRHSDS
Trigger: GCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGATCTGCCTGCAAAGCTaGCTTACCATTTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMICLQS*LTIFCQ
Trigger: CTGACAGAAAATGGTAAGTCAGCTTTGCAGGCAGAT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATGACATTCTCTCTATaGAGACATTCTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIMTFSL*RHSLCM
Trigger: CATGCAGAGAGAATGTCTTCATAGAGAGAATGTCAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCATTTTTGCCCTGGTaGTTCAAAGCTCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSFLPW*FKAQRI
Trigger: AATTCTTTGAGCTTTGAATCACCAGGGCAAAAATGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCATTTTTGCCCTGGTaGTTCAAAGCTCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSFLPW*FKAQRI
Trigger: AATTCTTTGAGCTTTGAATCACCAGGGCAAAAATGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATTCACAAGGTTAGTTaGAAGTCATTTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIIHKVS*KSFLPW
Trigger: CCAGGGCAAAAATGACTTTCAACTAACCTTGTGAAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTATGGTAATCAAGGCTaGCAATATAAATTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCYGNQG*QYKFSA
Trigger: AGCGGAGAATTTATATTGTCAGCCTTGATTACCATA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCAATGCCAATTAGTTTaGGCCACAGTGAATATAACT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCQCQLV*ATVNIT
Trigger: AGTTATATTCACTGTGGCTCAAACTAATTGGCATTG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTTCTCATTCTTGATTaGGTTGTACAGAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILLILD*VVQSLV
Trigger: AACAAGGCTCTGTACAACTCAATCAAGAATGAGAAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATATTAAGAAGCATTATTaGACAGGTAAGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHIKKHY*TGKAMD
Trigger: GTCCATTGCCTTACCTGTGCAATAATGCTTCTTAAT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTATTAAGAAGCATTATTaGACAGGTAAGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCIKKHY*TGKAMD
Trigger: GTCCATTGCCTTACCTGTGCAATAATGCTTCTTAAT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCTCTTCATCATCTACTaGCCATTCAAGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLFIIY*PFKLLI
Trigger: AATGAGAAGCTTGAATGGGCAGTAGATGATGAAGAG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTCTTCATCATCTACTaGCCATTCAAGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILFIIY*PFKLLI
Trigger: AATGAGAAGCTTGAATGGGCAGTAGATGATGAAGAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTTTCCATCCATATCTaGATGAATTTTCCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILSIHI*MNFPSQ
Trigger: TTGGCTCGGAAAATTCATGCAGATATGGATGGAAAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCTTTCCATCCATATCTaGATGAATTTTCCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLSIHI*MNFPSQ
Trigger: TTGGCTCGGAAAATTCATGCAGATATGGATGGAAAG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGCTCGGTGGTGATCTaGTTCAGCTTACTTTCATGT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSSVVI*FSLLSC
Trigger: ACATGAAAGTAAGCTGAAGCAGATCACCACCGAGCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCCTCACAGAAAAGGTaGATTAGCTATCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSSQKR*ISYQVA
Trigger: TGCAACTTGATAGCTAATGCACCTTTTCTGTGAGGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAAGTCACTTTGCACCTaGAACCAGAAGATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMKSLCT*NQKIPQ
Trigger: CTGAGGAATCTTCTGGTTGCAGGTGCAAAGTGACTT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCTTTCCCTGCTGGTTaGAAAAATTCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISFPAG*KNSSTI
Trigger: GATTGTGGAAGAATTTTTGCAACCAGCAGGGAAAGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGAGGCCTCTTTCCCTaGTGGTTGCAAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRGLFP*WLQKFF
Trigger: GAAGAATTTTTGCAACCAGCAGGGAAAGAGGCCTCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATTCAGGATGCAACATaGTTAACTGATGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIIQDAT*LTDDCK
Trigger: CTTGCAGTCATCAGTTAAGCATGTTGCATCCTGAAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGACATTCTCTCTGCATaGAATGGGCCAATTATTGTC +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNDILSA*NGPIIV
Trigger: GACAATAATTGGCCCATTGCATGCAGAGAGAATGTC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAAAATTTTCCTGCTGTTaGATTCAAGTCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLKFSCC*IQVKLS
Trigger: TGACAGTTTGACTTGAATGCAACAGCAGGAAAATTT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAAATTTTCCTGCTGTTaGATTCAAGTCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLKFSCC*IQVKLS
Trigger: TGACAGTTTGACTTGAATGCAACAGCAGGAAAATTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTTGCACACAGTACACTaGAAAAGATTCACAAGGTTA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLHTVH*KRFTRL
Trigger: TAACCTTGTGAATCTTTTGCAGTGTACTGTGTGCAA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGACTGGGAATGTGCAGATaGATTGTTCACCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRLGMCR*IVHPNK
Trigger: TTTGTTTGGGTGAACAATGCATCTGCACATTCCCAG...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCAAAATCTATAGGATaGTGGGTCTCTCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSKSIG*WVSLLS
Trigger: AGACAAGAGAGAGACCCAGCATCCTATAGATTTTGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGGAGAGGCTGTTCTTTaGAGTGATGTCTCAAAATCT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTGEAVL*SDVSKS
Trigger: AGATTTTGAGACATCACTGCAAAGAACAGCCTCTCC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCGCTGATAAAGGCGTTTaGCCAACCTTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLADKGV*PTFWLL
Trigger: AAGCAGCCAAAAGGTTGGCCAAACGCCTTTATCAGC...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACATCTTGTGAAGCAATaGTATCTGGGTTACAATAAA +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLHLVKQ*YLGYNK
Trigger: TTTATTGTAACCCAGATACCATTGCTTCACAAGATG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCGCACAGGTAAGGCAATaGACTCCATCTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLAQVRQ*TPSCEA
Trigger: TGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGC...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGACGACTGATGGTCTTTaGATGTGTTCCGTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGTTDGL*MCSVSF
Trigger: AAAGCTAACGGAACACATCCAAAGACCATCAGTCGT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGACAAGGCCTTTTCTaGCTTGTATTCATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRQGLF*LVFILL
Trigger: CAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTTTTTGCTTAATGCTTaGTGTTTCAGGTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIFLLNA*CFRSVI
Trigger: GATCACCGACCTGAAACACCAAGCATTAAGCAAAAA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCTTCCTGGCCGCAGATaGACTCTAAGTAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLPGRR*TLSNFL
Trigger: CAAAAAGTTACTTAGAGTCCATCTGCGGCCAGGAAG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCTTGCTTGGCTGAAATaGAATCAGCACTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLAWLK*NQHFKQ
Trigger: TTGCTTGAAGTGCTGATTCCATTTCAGCCAAGCAAG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAACCAATATCCATCGTaGACAACTGCAGCTACGTTT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTNQYPS*TTAATF
Trigger: AAACGTAGCTGCAGTTGTCCACGATGGATATTGGTT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGTAGCAGAGTGAAGTaGCTATCAAGGAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSSRVK*LSRRLR
Trigger: TCTCAGTCTCCTTGATAGCCACTTCACTCTGCTACT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 4 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGGCAGTCTGAGATCCTaGCTCACAAAAGAACCTTTA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMGSLRS*LTKEPL
Trigger: TAAAGGTTCTTTTGTGAGCCAGGATCTCAGACTGCC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATCTGTGTTTTACGACTaGCAGTGTCCAGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSVFYD*QCPALF
Trigger: AAAAAGAGCTGGACACTGCCAGTCGTAAAACACAGA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTCTGTGTTTTACGACTaGCAGTGTCCAGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSVFYD*QCPALF
Trigger: AAAAAGAGCTGGACACTGCCAGTCGTAAAACACAGA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAAATCTATAGGATGCTaGGTCTCTCTCTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNKSIGC*VSLLSP
Trigger: AGGAGACAAGAGAGAGACCCAGCATCCTATAGATTT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATACAGTACCCAATCCTaGGATGCCCTGATATACTTT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRYSTQS*DALIYF
Trigger: AAAGTATATCAGGGCATCCCAGGATTGGGTACTGTA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCTGAAGACTTATTTATaGCGACCGATGGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLKTYL*RPMGKY
Trigger: ATATTTTCCCATCGGTCGCCATAAATAAGTCTTCAG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCGGACAGGTGCCCATTTaGTTTCAGCATCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLGQVPI*FQHLLQ
Trigger: TTGGAGAAGATGCTGAAACCAAATGGGCACCTGTCC...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
3UTR CAA 72 bp TCAGATTTTATACATGGGCCACCTGTATGGTCAATTTaGCAACAACACTATGACCAAGGCATTCTGATAGCT +
Preference number: 4 (lower is better)
Translates to: SDFIHGPPVWSI*QQHYDQGILIA
Trigger: AGCTATCAGAATGCCTTGGTCATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGTAGATCGGTATTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTCAACATCTGATCTTTTaGATCTGTCCAGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: CRSVLRSIIAQVRQWTPSQHLIF*ICPADK
Trigger: TTTATCAGCTGGACAGATTCAAAAGATCAGATGTTG...AGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCAAATACCTGAGTGACTaGTCCAGCGTCATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLKYLSD*SSVIPV
Trigger: TACAGGAATGACGCTGGATCAGTCACTCAGGTATTT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCAAAGAAATACCTGAGTaGCTGATCCAGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLKEIPE*LIQRHS
Trigger: GGAATGACGCTGGATCAGTCACTCAGGTATTTCTTT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCATGGACTCCATCTTGTaGAGCAATGGTATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLMDSIL*SNGIWV
Trigger: AACCCAGATACCATTGCTTCACAAGATGGAGTCCAT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLLADLQ*TPDRSS
Trigger: AGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAG...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTATACATAATTCATTCTaGAATCACGATCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTIHNSF*NHDPLL
Trigger: GAGGAGGGGATCGTGATTTCAGAATGAATTATGTAT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCCAGTAATTAAGTTTTaGTTGCTAATGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIPVIKF*LLMRNP
Trigger: GGGATTCCTCATTAGCAATCAAAACTTAATTACTGG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTCCTTCCTTTATGGATaGGAGATGGAAAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSFLYG*EMEKES
Trigger: AGATTCCTTTTCCATCTCTCATCCATAAAGGAAGGA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTCCTTCCTTTATGGATaGGAGATGGAAAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSFLYG*EMEKES
Trigger: AGATTCCTTTTCCATCTCTCATCCATAAAGGAAGGA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAATGACATTCTCTCTATaGAGACATTCTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRMTFSL*RHSLCM
Trigger: CATGCAGAGAGAATGTCTTCATAGAGAGAATGTCAT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTACATGTACCATACACTaGTATGCAATCTACACACTG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTTCTIH*YAIYTL
Trigger: CAGTGTGTAGATTGCATATCAGTGTATGGTACATGT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCATTTTTGCCCTGGTaGTTCAAAGCTCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSFLPW*FKAQRI
Trigger: AATTCTTTGAGCTTTGAATCACCAGGGCAAAAATGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTCTTTTTCCACCTGCTaGACTGAAAAACTAGAAACA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGISFSTC*TEKLET
Trigger: TGTTTCTAGTTTTTCAGTTCAGCAGGTGGAAAAAGA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAGTATTTCCACTCCTTaGAATTCCACATGTTTGACC +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNSISTP*NSTCLT
Trigger: GGTCAAACATGTGGAATTTCAAGGAGTGGAAATACT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATACAATTCAAACTCTCTaGATCAGCTACAAAGACACG +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNTIQTL*ISYKDT
Trigger: CGTGTCTTTGTAGCTGATTCAGAGAGTTTGAATTGT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGTTAAGGCCCAAAAATaGAACGTTTTGCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRVKAQK*NVLLLL
Trigger: TAGGAGAAGCAAAACGTTTCATTTTTGGGCCTTAAC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCCACAAGAAAGAATGTaGTATGGATCCCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNPQERM*YGSPHL
Trigger: TAAATGAGGGGATCCATATCACATTCTTTCTTGTGG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTTCTCATTCTTGATTaGGTTGTACAGAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLLILD*VVQSLV
Trigger: AACAAGGCTCTGTACAACTCAATCAAGAATGAGAAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTTTCCAAAATTTCAGTaGTCCCCATTTCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIFPKFQ*SPFQNE
Trigger: CTCATTCTGAAATGGGGAGCACTGAAATTTTGGAAA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp AAAAATGGGTTAGTAGTACTTCCAATACGACTGATGGTCTTTGGATGTGTTCCGTTTCCAAAATTTCAGTaGTCCCCATTTCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: KNGLVVLPIRLMVFGCVPFPKFQ*SPFQNE
Trigger: CTCATTCTGAAATGGGGAGCACTGAAATTTTGGAAA...CGGAACACATCCAAAGACCATCAGTCGTATTGGAAGTACTACTAACCCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGATTAAGAAGCATTATTaGACAGGTAAGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLIKKHY*TGKAMD
Trigger: GTCCATTGCCTTACCTGTGCAATAATGCTTCTTAAT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGATTAAGAAGCATTATTaGACAGGTAAGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMIKKHY*TGKAMD
Trigger: GTCCATTGCCTTACCTGTGCAATAATGCTTCTTAAT...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR GCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCTACCCCTTGCAGATTTaGAATGAACTCCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLYPLQI*NELLTG
Trigger: ACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTA...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR GCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCTCTTCATCATCTACTaGCCATTCAAGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNLFIIY*PFKLLI
Trigger: AATGAGAAGCTTGAATGGGCAGTAGATGATGAAGAG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATCAAGCAAGCTAATGTaGTTCCCTAAGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSSKLM*FPKFSI
Trigger: GATTGAGAACTTAGGGAAGCACATTAGCTTGCTTGA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGAACAAGCTCATGACTaGAAAGTTAATAGAACCATT +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCEQAHD*KVNRTI
Trigger: AATGGTTCTATTAACTTTGCAGTCATGAGCTTGTTC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAATTCACTGGAACCATaGTATTCCTGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMNSLEP*YSCRAA
Trigger: AGCTGCTCTACAGGAATAGCATGGTTCCAGTGAATT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGAAAGACAGATAACTTaGTTGTGGATATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHERQIT*LWICWI
Trigger: AATCCAACATATCCACAAGCAAGTTATCTGTCTTTC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCTGTATGGTCAATTTTaGAACAACACTATGACCAAG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLYGQF*NNTMTK
Trigger: CTTGGTCATAGTGTTGTTGCAAAATTGACCATACAG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTTTGATCATGTAAGATaGTATAAGACTGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHFDHVR*YKTGGK
Trigger: CTTTCCACCAGTCTTATAGCATCTTACATGATCAAA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTTGATCATGTAAGATaGTATAAGACTGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCFDHVR*YKTGGK
Trigger: CTTTCCACCAGTCTTATAGCATCTTACATGATCAAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCTTGCAAAATTTTCCTaGTGTTGCATTCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLAKFS*CCIQVK
Trigger: TTTGACTTGAATGCAACAGCAGGAAAATTTTGCAAG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCTTGCAAAATTTTCCTaGTGTTGCATTCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLAKFS*CCIQVK
Trigger: TTTGACTTGAATGCAACAGCAGGAAAATTTTGCAAG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTACCATACACTGATATaGAATCTACACACTGATGCA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIYHTLI*NLHTDA
Trigger: TGCATCAGTGTGTAGATTGCATATCAGTGTATGGTA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTTGCACACAGTACACTaGAAAAGATTCACAAGGTTA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILHTVH*KRFTRL
Trigger: TAACCTTGTGAATCTTTTGCAGTGTACTGTGTGCAA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTTGCACACAGTACACTaGAAAAGATTCACAAGGTTA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLHTVH*KRFTRL
Trigger: TAACCTTGTGAATCTTTTGCAGTGTACTGTGTGCAA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATCAAAATCTATAGGATaGTGGGTCTCTCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRSKSIG*WVSLLS
Trigger: AGACAAGAGAGAGACCCAGCATCCTATAGATTTTGA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp TCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTCCGAGCCATCTTGTGAAGCAATaGTATCTGGGTTACAATAAA +
Preference number: 4 (lower is better)
Translates to: SFSSWSLLSIHICMNFPSHLVKQ*YLGYNK
Trigger: TTTATTGTAACCCAGATACCATTGCTTCACAAGATG...GCTCGGAAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRNVQK*VSSTSN
Trigger: ATTGGAAGTACTACTAACCCATTTTTGGACATTCCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGACAAGGCCTTTTCTaGCTTGTATTCATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTRQGLF*LVFILL
Trigger: CAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GTCGGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTAAGTTTAAACACGTTTaGTTTCTTCTCATAGTCCGT +
Preference number: 4 (lower is better)
Translates to: VGSFKFKHVWFLLIVRGLKFKHV*FLLIVR
Trigger: ACGGACTATGAGAAGAAACCAAACGTGTTTAAACTT...AAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCCGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAAGTTTAAACACGTTTaGTTTCTTCTCATAGTCCGT +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHKFKHV*FLLIVR
Trigger: ACGGACTATGAGAAGAAACCAAACGTGTTTAAACTT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTTTTTGCTTAATGCTTaGTGTTTCAGGTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTFLLNA*CFRSVI
Trigger: GATCACCGACCTGAAACACCAAGCATTAAGCAAAAA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTTTCTCTAATTCACTaGAACCATGCTATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCFSLIH*NHAIPV
Trigger: TACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATCATAGATATAGACTGTaGGCAAACACATTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNHRYRL*ANTFKP
Trigger: TGGCTTGAATGTGTTTGCCCACAGTCTATATCTATG...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGAAGTTCTGTAGCTTaGCCACAGGGTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRSSVA*PQGEIQ
Trigger: TTGTATTTCACCCTGTGGCCAAGCTACAGAACTTCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTTAGGATGCCACTTTaGTTCTTTGTTTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLRMPL*FFVLQC
Trigger: GCACTGTAAAACAAAGAACCAAAGTGGCATCCTAAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTATCAAATGGTTACTTaGCTTTATAAACTCCATGGC +
Preference number: 4 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCYQMVT*LYKLHG
Trigger: GCCATGGAGTTTATAAAGCCAAGTAACCATTTGATA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGACATGGTTACCCTAAATaGAAAGCAACCACTTTACTG +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRHGYPK*KATTLL
Trigger: CAGTAAAGTGGTTGCTTTCCATTTAGGGTAACCATG...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCTTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLFAMNS*QVIFFP
Trigger: TGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAA...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR TCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATTACCAGAAAGATCTTaGAAAACCCTATTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRLPERS*KTLFCS
Trigger: GGAGCAAAATAGGGTTTTTCAAGATCTTTCTGGTAA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGATGACATTCTCTCTATaGAGACATTCTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMMTFSL*RHSLCM
Trigger: CATGCAGAGAGAATGTCTTCATAGAGAGAATGTCAT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATTCTTTTTCCACCTGCTaGACTGAAAAACTAGAAACA +
Preference number: 4 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNSFSTC*TEKLET
Trigger: TGTTTCTAGTTTTTCAGTTCAGCAGGTGGAAAAAGA...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGTTAAGGCCCAAAAATaGAACGTTTTGCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMVKAQK*NVLLLL
Trigger: TAGGAGAAGCAAAACGTTTCATTTTTGGGCCTTAAC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATATGGTAATCAAGGCTaGCAATATAAATTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRYGNQG*QYKFSA
Trigger: AGCGGAGAATTTATATTGTCAGCCTTGATTACCATA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTTTCCAAAATTTCAGTaGTCCCCATTTCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGFPKFQ*SPFQNE
Trigger: CTCATTCTGAAATGGGGAGCACTGAAATTTTGGAAA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGATTCAGGATGCAACATaGTTAACTGATGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMIQDAT*LTDDCK
Trigger: CTTGCAGTCATCAGTTAAGCATGTTGCATCCTGAAT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTTTGATCATGTAAGATaGTATAAGACTGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLFDHVR*YKTGGK
Trigger: CTTTCCACCAGTCTTATAGCATCTTACATGATCAAA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTACCATACACTGATATaGAATCTACACACTGATGCA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGYHTLI*NLHTDA
Trigger: TGCATCAGTGTGTAGATTGCATATCAGTGTATGGTA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGCATCTTGTGAAGCAATaGTATCTGGGTTACAATAAA +
Preference number: 4 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMHLVKQ*YLGYNK
Trigger: TTTATTGTAACCCAGATACCATTGCTTCACAAGATG...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIRNVQK*VSSTSN
Trigger: ATTGGAAGTACTACTAACCCATTTTTGGACATTCCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAAGTTTAAACACGTTTaGTTTCTTCTCATAGTCCGT +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIKFKHV*FLLIVR
Trigger: ACGGACTATGAGAAGAAACCAAACGTGTTTAAACTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTTTTTGCTTAATGCTTaGTGTTTCAGGTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMFLLNA*CFRSVI
Trigger: GATCACCGACCTGAAACACCAAGCATTAAGCAAAAA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAAATCTATTCCTGGATaGAAGGATATCAACGATAGA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIKSIPG*KDINDR
Trigger: TCTATCGTTGATATCCTTCCATCCAGGAATAGATTT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 4 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIRKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 4 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCTTAGGATGCCACTTTaGTTCTTTGTTTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLRMPL*FFVLQC
Trigger: GCACTGTAAAACAAAGAACCAAAGTGGCATCCTAAG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAAAGGAGAATGCCTTTaGATTTCAGTCCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTKGECL*ISVLPL
Trigger: TAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAAATCAAAGAGTCAATaGGCTGTAAACTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLKSKSQ*AVNFVP
Trigger: AGGAACAAAGTTTACAGCCCATTGACTCTTTGATTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAAAGAATGTGATATaGATCCCCTCATTTATGTGT +
Preference number: 4 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRKNVI*IPSFMC
Trigger: ACACATAAATGAGGGGATCCATATCACATTCTTTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
3UTR CAA 72 bp TCAGGTAGAAAGACAGATAACTTGCTTGTGGATATGTaGGATTCAGTGAGAGGCTACAAAAATCAATCTGAT +
Preference number: 4 (lower is better)
Translates to: SGRKTDNLLVDM*DSVRGYKNQSD
Trigger: ATCAGATTGATTTTTGTAGCCTCTCACTGAATCCAACATATCCACAAGCAAGTTATCTGTCTTTCTACCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCAACATCTGATCTTTTaGATCTGTCCAGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMQHLIF*ICPADK
Trigger: TTTATCAGCTGGACAGATTCAAAAGATCAGATGTTG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCGTGTTTTGCAACATCTaGTCTTTTGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLVFCNI*SFESVQ
Trigger: CTGGACAGATTCAAAAGATCAGATGTTGCAAAACAC...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCATTTTTGCCCTGGTaGTTCAAAGCTCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSFLPW*FKAQRI
Trigger: AATTCTTTGAGCTTTGAATCACCAGGGCAAAAATGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCAATGCCAATTAGTTTaGGCCACAGTGAATATAACT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMQCQLV*ATVNIT
Trigger: AGTTATATTCACTGTGGCTCAAACTAATTGGCATTG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCTATACATATCAGATaGCTCACTTGTCTACAAGGT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSIHIR*LTCLQG
Trigger: ACCTTGTAGACAAGTGAGTCATCTGATATGTATAGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTTTCCAAAATTTCAGTaGTCCCCATTTCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMFPKFQ*SPFQNE
Trigger: CTCATTCTGAAATGGGGAGCACTGAAATTTTGGAAA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR GCA 90 bp ATCTATTGGAGAAGTGTATTAAAACTCTCTCTCGTTCTTGAGTTTCTCCCACAATTTCCAAAATTTCAGTaGTCCCCATTTCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: IYWRSVLKLSLVLEFLPQFPKFQ*SPFQNE
Trigger: CTCATTCTGAAATGGGGAGCACTGAAATTTTGGAAA...TTGTGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACACTTCTCCAATAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCTGTATGGTCAATTTTaGAACAACACTATGACCAAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLYGQF*NNTMTK
Trigger: CTTGGTCATAGTGTTGTTGCAAAATTGACCATACAG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAAATTTTCCTGCTGTTaGATTCAAGTCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGKFSCC*IQVKLS
Trigger: TGACAGTTTGACTTGAATGCAACAGCAGGAAAATTT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTACCATACACTGATATaGAATCTACACACTGATGCA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMYHTLI*NLHTDA
Trigger: TGCATCAGTGTGTAGATTGCATATCAGTGTATGGTA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGRNVQK*VSSTSN
Trigger: ATTGGAAGTACTACTAACCCATTTTTGGACATTCCT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAAGTTTAAACACGTTTaGTTTCTTCTCATAGTCCGT +
Preference number: 4 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGKFKHV*FLLIVR
Trigger: ACGGACTATGAGAAGAAACCAAACGTGTTTAAACTT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTRKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTTCAGATTTTATACATaGGCCACCTGTATGGTCAAT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMFRFYT*ATCMVN
Trigger: ATTGACCATACAGGTGGCCCATGTATAAAATCTGAA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAAAGGAGAATGCCTTTaGATTTCAGTCCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMKGECL*ISVLPL
Trigger: TAAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGATAAAAATTCATATTTaGCCTTGGCAACACTCTGGG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMIKIHI*PWQHSG
Trigger: CCCAGAGTGTTGCCAAGGCCAAATATGAATTTTTAT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAAATCAAAGAGTCAATaGGCTGTAAACTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTKSKSQ*AVNFVP
Trigger: AGGAACAAAGTTTACAGCCCATTGACTCTTTGATTT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTATCAAATGGTTACTTaGCTTTATAAACTCCATGGC +
Preference number: 4 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTYQMVT*LYKLHG
Trigger: GCCATGGAGTTTATAAAGCCAAGTAACCATTTGATA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR TCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCCAACATCTGATCTTTTaGATCTGTCCAGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLQHLIF*ICPADK
Trigger: TTTATCAGCTGGACAGATTCAAAAGATCAGATGTTG...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR GCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCATTAAGAAGCATTATTaGACAGGTAAGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLIKKHY*TGKAMD
Trigger: GTCCATTGCCTTACCTGTGCAATAATGCTTCTTAAT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR GCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTTTGATCATGTAAGATaGTATAAGACTGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMFDHVR*YKTGGK
Trigger: CTTTCCACCAGTCTTATAGCATCTTACATGATCAAA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCATCTTGTGAAGCAATaGTATCTGGGTTACAATAAA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMHLVKQ*YLGYNK
Trigger: TTTATTGTAACCCAGATACCATTGCTTCACAAGATG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGGAATGTCCAAAAATaGGTTAGTAGTACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRNVQK*VSSTSN
Trigger: ATTGGAAGTACTACTAACCCATTTTTGGACATTCCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGCAAACAAAATTAACTaGGTATCAATCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMANKIN*VSIFPQ
Trigger: CTGAGGAAAGATTGATACCCAGTTAATTTTGTTTGC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGAAAAATCTATTCCTaGATGGAAGGATATCAACGA +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMRKIYS*MEGYQR
Trigger: TCGTTGATATCCTTCCATCCAGGAATAGATTTTTCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAATCAATCTGATACATaGGCCATATTGGTAACTATC +
Preference number: 4 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMNQSDT*AILVTI
Trigger: GATAGTTACCAATATGGCCCATGTATCAGATTGATT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCCATCTTGTGAAGCAATaGTATCTGGGTTACAATAAA +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLHLVKQ*YLGYNK
Trigger: TTTATTGTAACCCAGATACCATTGCTTCACAAGATG...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CCA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCTTCTTTCCAATATTGTaGCCATGTAGATCGGTATTA +
Preference number: 4 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLFFPIL*PCRSVL
Trigger: TAATACCGATCTACATGGCCACAATATTGGAAAGAA...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS TCA 90 bp GCTTCGGGACACGCACCTAGGCGTCCCTCGGGGTCCCGGCCTCTCTaGCCGGGCTCCCCCGGCACCGATCCGCGGCCGGAGCGTTTAGTC +
Preference number: 5 (lower is better)
Translates to: ASGHAPRRPSGSRPL*PGSPGTDPRPERLV
Trigger: GACTAAACGCTCCGGCCGCGGATCGGTGCCGGGGGAGCCCGGTCAGAGAGGCCGGGACCCCGAGGGACGCCTAGGTGCGTGTCCCGAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521841.1
CDS CCA 90 bp CTGGTGTTTCCTCTCAGGAAGGGCCGTGTGACTGGAGCCGCGAGTTaGGCGCCGTCTCGCCGGGGCTGGAGGTACGCGGGCTTCGGGACA +
Preference number: 5 (lower is better)
Translates to: LVFPLRKGRVTGAAS*APSRRGWRYAGFGT
Trigger: TGTCCCGAAGCCCGCGTACCTCCAGCCCCGGCGAGACGGCGCCCAACTCGCGGCTCCAGTCACACGGCCCTTCCTGAGAGGAAACACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521841.1
CDS GCA 90 bp GCAGGTCTCGGCGCCTCTCCTCAGCACAGTCCTTTCCGCTCCATCTaGAGCGTGGACCAGGACAGCCCTTGGAGGGGAGCATCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: AGLGASPQHSPFRSI*SVDQDSPWRGASQG
Trigger: GCCTTGGGATGCTCCCCTCCAAGGGCTGTCCTGGTCCACGCTGCAGATGGAGCGGAAAGGACTGTGCTGAGGAGAGGCGCCGAGACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 90 bp CATCCCAAGGCATCCCTGCATCGGGGGTCCATGCCCCACAGATCCTaGGTGGCAGAAGTGACTGGCCAGTGCTTCCAGCCCATGGAGGGA +
Preference number: 5 (lower is better)
Translates to: HPKASLHRGSMPHRS*VAEVTGQCFQPMEG
Trigger: TCCCTCCATGGGCTGGAAGCACTGGCCAGTCACTTCTGCCACCCAGGATCTGTGGGGCATGGACCCCCGATGCAGGGATGCCTTGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS TCA 90 bp CCCTGCATCGGGGGTCCATGCCCCACAGATCCTGGGTGGCAGAAGTaGCTGGCCAGTGCTTCCAGCCCATGGAGGGACTGCTGCTTTCAT +
Preference number: 5 (lower is better)
Translates to: PCIGGPCPTDPGWQK*LASASSPWRDCCFH
Trigger: ATGAAAGCAGCAGTCCCTCCATGGGCTGGAAGCACTGGCCAGTCACTTCTGCCACCCAGGATCTGTGGGGCATGGACCCCCGATGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 90 bp CCAGCCCAGTGTCTTGGAGGCAGGGGCCTGGCAATGCCTGTGATGTaGGGATCTGCAATCACCACCCCTGCTTACGTCCGGATCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PAQCLGGRGLAMPVM*GSAITTPAYVRILG
Trigger: TCCCAGGATCCGGACGTAAGCAGGGGTGGTGATTGCAGATCCCCACATCACAGGCATTGCCAGGCCCCTGCCTCCAAGACACTGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS GCA 90 bp AAGGCACTTTCCAACCGTTCCAAGGCTCTCACGCTGGAGGAACTCTaGGGGGTTGTGCCTGAGCAGCTCCTGAGCGCCGTGATCCGCGTT +
Preference number: 5 (lower is better)
Translates to: KALSNRSKALTLEEL*GVVPEQLLSAVIRV
Trigger: AACGCGGATCACGGCGCTCAGGAGCTGCTCAGGCACAACCCCGCAGAGTTCCTCCAGCGTGAGAGCCTTGGAACGGTTGGAAAGTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000521878.1
ENST00000614430.3
CDS GCA 90 bp GCAGCCCTTGCTGGTGTGCACAGCTGGACAGTACCTGTAGAGCCATaGCCTTGTCGCCTGCGCTGTGGTACCTGTGGCCTCCTTACAGCT +
Preference number: 5 (lower is better)
Translates to: AALAGVHSWTVPVEP*PCRLRCGTCGLLTA
Trigger: AGCTGTAAGGAGGCCACAGGTACCACAGCGCAGGCGACAAGGGCATGGCTCTACAGGTACTGTCCAGCTGTGCACACCAGCAAGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 90 bp GACCCGGCCTGGGCGTCCCATGGAGCTGCTTCGATCACATCCCCCTaGGTGCTCTCTCCCAAGAGCAGACCTCTGCTCTTTCAAGAAACC +
Preference number: 5 (lower is better)
Translates to: DPAWASHGAASITSP*VLSPKSRPLLFQET
Trigger: GGTTTCTTGAAAGAGCAGAGGTCTGCTCTTGGGAGAGAGCACCCAGGGGGATGTGATCGAAGCAGCTCCATGGGACGCCCAGGCCGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 90 bp GCATCGGGGGTCCATGCCCCACAGATCCTGGGTGGCAGAAGTGACTaGCCAGTGCTTCCAGCCCATGGAGGGACTGCTGCTTTCATCACT +
Preference number: 5 (lower is better)
Translates to: ASGVHAPQILGGRSD*PVLPAHGGTAAFIT
Trigger: AGTGATGAAAGCAGCAGTCCCTCCATGGGCTGGAAGCACTGGCCAGTCACTTCTGCCACCCAGGATCTGTGGGGCATGGACCCCCGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 90 bp AGTACCTGTAGAGCCATGCCCTTGTCGCCTGCGCTGTGGTACCTGTaGCCTCCTTACAGCTCCTGGGGAGTATTTGGCAGGTCTCGGCGC +
Preference number: 5 (lower is better)
Translates to: STCRAMPLSPALWYL*PPYSSWGVFGRSRR
Trigger: GCGCCGAGACCTGCCAAATACTCCCCAGGAGCTGTAAGGAGGCCACAGGTACCACAGCGCAGGCGACAAGGGCATGGCTCTACAGGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 90 bp ATTGCAGCAACCATACAGACACCAAGAAGAGCCCATCGCAACCCCTaGGGTGCGCCTGGACCATCCTTCCTCTCCGAAGCCCCGTCCAGT +
Preference number: 5 (lower is better)
Translates to: IAATIQTPRRAHRNP*GAPGPSFLSEAPSS
Trigger: ACTGGACGGGGCTTCGGAGAGGAAGGATGGTCCAGGCGCACCCCAGGGGTTGCGATGGGCTCTTCTTGGTGTCTGTATGGTTGCTGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000517971.5
ENST00000519633.1
ENST00000519653.5
CDS CCA 90 bp CAGCTGGACAGTACCTGTAGAGCCATGCCCTTGTCGCCTGCGCTGTaGTACCTGTGGCCTCCTTACAGCTCCTGGGGAGTATTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: QLDSTCRAMPLSPAL*YLWPPYSSWGVFGR
Trigger: CCTGCCAAATACTCCCCAGGAGCTGTAAGGAGGCCACAGGTACCACAGCGCAGGCGACAAGGGCATGGCTCTACAGGTACTGTCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS GCA 90 bp GCTCTCTCCCAAGAGCAGACCTCTGCTCTTTCAAGAAACCAACACTaGCTGCAGAGTGGCAGGTCACTGCTGAGCTCCCGAGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ALSQEQTSALSRNQH*LQSGRSLLSSRGRP
Trigger: TGGCCTCCCTCGGGAGCTCAGCAGTGACCTGCCACTCTGCAGGCAGTGTTGGTTTCTTGAAAGAGCAGAGGTCTGCTCTTGGGAGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 90 bp CGGCCTGGGCGTCCCATGGAGCTGCTTCGATCACATCCCCCTGGGTaGTCTCTCCCAAGAGCAGACCTCTGCTCTTTCAAGAAACCAACA +
Preference number: 5 (lower is better)
Translates to: RPGRPMELLRSHPPG*SLPRADLCSFKKPT
Trigger: TGTTGGTTTCTTGAAAGAGCAGAGGTCTGCTCTTGGGAGAGAGCACCCAGGGGGATGTGATCGAAGCAGCTCCATGGGACGCCCAGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 90 bp GGGTCCATGCCCCACAGATCCTGGGTGGCAGAAGTGACTGGCCAGTaGTTCCAGCCCATGGAGGGACTGCTGCTTTCATCACTCATGATG +
Preference number: 5 (lower is better)
Translates to: GSMPHRSWVAEVTGQ*FQPMEGLLLSSLMM
Trigger: CATCATGAGTGATGAAAGCAGCAGTCCCTCCATGGGCTGGAAGCACTGGCCAGTCACTTCTGCCACCCAGGATCTGTGGGGCATGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS TCA 90 bp CTCTTTCAAGAAACCAACACTGCCTGCAGAGTGGCAGGTCACTGCTaGGCTCCCGAGGGAGGCCAAAGGACAAGATGGCTCCTGCACACA +
Preference number: 5 (lower is better)
Translates to: LFQETNTACRVAGHC*APEGGQRTRWLLHT
Trigger: TGTGTGCAGGAGCCATCTTGTCCTTTGGCCTCCCTCGGGAGCTCAGCAGTGACCTGCCACTCTGCAGGCAGTGTTGGTTTCTTGAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS TCA 90 bp AGACTGCCGCCGGATAGAATCCTCCCGGGAGTATTTCACGGAACCTaGGGTCCTCACCCGTACCTTGCTGGCACTCTGGACACTATTCAC +
Preference number: 5 (lower is better)
Translates to: RLPPDRILPGVFHGT*GPHPYLAGTLDTIH
Trigger: GTGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATACTCCCGGGAGGATTCTATCCGGCGGCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS CCA 90 bp CCACAGTATTTCCACTCCTTGAAATTCCACATGTTTGACCCGGCCTaGGCGTCCCATGGAGCTGCTTCGATCACATCCCCCTGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: PQYFHSLKFHMFDPA*ASHGAASITSPWVL
Trigger: GAGCACCCAGGGGGATGTGATCGAAGCAGCTCCATGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTCAAGGAGTGGAAATACTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS TCA 90 bp CTCCTCCTGTCCACAGTATTTCCACTCCTTGAAATTCCACATGTTTaGCCCGGCCTGGGCGTCCCATGGAGCTGCTTCGATCACATCCCC +
Preference number: 5 (lower is better)
Translates to: LLLSTVFPLLEIPHV*PGLGVPWSCFDHIP
Trigger: GGGGATGTGATCGAAGCAGCTCCATGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTCAAGGAGTGGAAATACTGTGGACAGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 90 bp AGAGCAGACCTCTGCTCTTTCAAGAAACCAACACTGCCTGCAGAGTaGCAGGTCACTGCTGAGCTCCCGAGGGAGGCCAAAGGACAAGAT +
Preference number: 5 (lower is better)
Translates to: RADLCSFKKPTLPAE*QVTAELPREAKGQD
Trigger: ATCTTGTCCTTTGGCCTCCCTCGGGAGCTCAGCAGTGACCTGCCACTCTGCAGGCAGTGTTGGTTTCTTGAAAGAGCAGAGGTCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVGRGAP*YRELGN
Trigger: GTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGTCCTCACCCGTACCTaGCTGGCACTCTGGACACTA +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVVLTRT*LALWTL
Trigger: TAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGAC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS TCA 90 bp TGGGTCTCTCTCTTGTCTCCTCCTGTCCACAGTATTTCCACTCCTTaGAATTCCACATGTTTGACCCGGCCTGGGCGTCCCATGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WVSLLSPPVHSISTP*NSTCLTRPGRPMEL
Trigger: CAGCTCCATGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTCAAGGAGTGGAAATACTGTGGACAGGAGGAGACAAGAGAGAGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS TCA 90 bp GCTGCTTCTGTTGCAAGTACAAACTGCTACACACTGACTCCGCAGTaGCATTCTCCCAGAATGCCACTGGATCCCTCAGGGGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: AASVASTNCYTLTPQ*HSPRMPLDPSGAQG
Trigger: TCCCTGAGCCCCTGAGGGATCCAGTGGCATTCTGGGAGAATGTCACTGCGGAGTCAGTGTGTAGCAGTTTGTACTTGCAACAGAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518303.5
ENST00000519851.5
CDS GCA 90 bp GTCACTGCTGAGCTCCCGAGGGAGGCCAAAGGACAAGATGGCTCCTaGACACAGACAGCCCCTTTCCTCCCATTATTCATTATCTGGGAA +
Preference number: 5 (lower is better)
Translates to: VTAELPREAKGQDGS*TQTAPFLPLFIIWE
Trigger: TTCCCAGATAATGAATAATGGGAGGAAAGGGGCTGTCTGTGTGCAGGAGCCATCTTGTCCTTTGGCCTCCCTCGGGAGCTCAGCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 90 bp CCTCCCGGGAGTATTTCACGGAACCTGAGGTCCTCACCCGTACCTTaGTGGCACTCTGGACACTATTCACGCCAATCATTTTCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PPGSISRNLRSSPVP*WHSGHYSRQSFSKV
Trigger: GACCTTCGAAAATGATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATACTCCCGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS CCA 90 bp CCCGGGAGTATTTCACGGAACCTGAGGTCCTCACCCGTACCTTGCTaGCACTCTGGACACTATTCACGCCAATCATTTTCGAAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: PGSISRNLRSSPVPC*HSGHYSRQSFSKVN
Trigger: GTTGACCTTCGAAAATGATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATACTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCCGTTTGGCCAACCTTTaGGCTGCTTCCACATTGCTG +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRLANL*AASTLL
Trigger: CAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAACG...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRPLYRE*GNRLGA
Trigger: TGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS TCA 90 bp GCCACCATCTGCAGACACACTCAGGATATCCTGATGTCCTCCCCCTaGTGTCCTCTCCAAGAACTGACCACCTTCTTTAATGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ATICRHTQDILMSSP*CPLQELTTFFNALL
Trigger: CAACAGCGCATTAAAGAAGGTGGTCAGTTCTTGGAGAGGACATCAGGGGGAGGACATCAGGATATCCTGAGTGTGTCTGCAGATGGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTACTCATCGACGTCCTaGGCTTTGACCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVYSSTS*ALTFLS
Trigger: CGACAAGAAGGTCAAAGCCAAGGACGTCGATGAGTA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VIFLPSQASTDAAPREWFFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGTTCCTTGAGATGACTTaGAGAGGGGGCCTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRFLEMT*RGGLSD
Trigger: GTCAGAGAGGCCCCCTCTCAAAGTCATCTCAAGGAA...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCCGACAGTTTCGCCATaGAAAAGGAGCAGGCTGCTA +
Preference number: 5 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRPTVSP*KRSRLL
Trigger: TAGCAGCCTGCTCCTTTTCAATGGCGAAACTGTCGG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGTCCTCACCCGTACCTaGCTGGCACTCTGGACACTA +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDVLTRT*LALWTL
Trigger: TAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGAC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCTTGGCTGCTTCCACATaGCTGCTGGTACCATTACTG +
Preference number: 5 (lower is better)
Translates to: CQCVVHTHSVFQVLFRQGLAAST*LLVPLL
Trigger: CAGTAATGGTACCAGCAGCAATGTGGAAGCAGCCAA...GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTCTTCTGAGAGCCGATaGCTGCTGGAAATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSSSESR*LLEMVV
Trigger: CACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGTACTCATCGACGTCCTaGGCTTTGACCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRYSSTS*ALTFLS
Trigger: CGACAAGAAGGTCAAAGCCAAGGACGTCGATGAGTA...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CGTGGCCTTGGATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTACTCAGTAGCTCTTaGCCTCCTTCCTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: RGLGCQCVVHTHSVFQVLLLSSS*PPSLRM
Trigger: CATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAA...GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp CGTGGCCTTGGATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCACGTTACGCTTGACTTaGGCAGTGATTGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: RGLGCQCVVHTHSVFQVLTLRLT*AVIGEV
Trigger: TACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGT...GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGCTCAAGGGCCGATTATaGCCCCCATCCTTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRLKGRL*PPSFSK
Trigger: TTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAG...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATGTTCAGTCGGAGCTCTCTTACCAGTAAAGCTCAGAGGGGAGTGTGGACAAGGAGATGGCGTGGCACTTaGGAAGACTCTTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: MFSRSSLTSKAQRGVWTRRWRGT*EDSLLS
Trigger: TGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCT...CCTTGTCCACACTCCCCTCTGAGCTTTACTGGTAAGAGAGCTCCGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTAGCAGCTCTGCCACCTaGGAAAATGATGCACACCAG +
Preference number: 5 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPSSSAT*ENDAHQ
Trigger: CTGGTGTGCATCATTTTCCAAGGTGGCAGAGCTGCT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGTCCTTAATCGAGCCTaGGGCTGGGACTCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGVLNRA*GWDSSR
Trigger: CCTAGAAGAGTCCCAGCCCAAGGCTCGATTAAGGAC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTCAGTCACTCTCGGAGTaGATACCTTGCCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVQSLSE*IPCLSR
Trigger: CCTGCTGAGGCAAGGTATCAACTCCGAGAGTGACTG...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCAGTCACTCTCGGAGTaGATACCTTGCCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWQSLSE*IPCLSR
Trigger: CCTGCTGAGGCAAGGTATCAACTCCGAGAGTGACTG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCCGACAGTTTCGCCATaGAAAAGGAGCAGGCTGCTA +
Preference number: 5 (lower is better)
Translates to: VIFLPSQASTDAAPREWFPTVSP*KRSRLL
Trigger: TAGCAGCCTGCTCCTTTTCAATGGCGAAACTGTCGG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAATTTTCATGGACTTaGACCTGTGAGACTGCCGCC +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVKFSWT*TCETAA
Trigger: GGCGGCAGTCTCACAGGTCAAAGTCCATGAAAATTT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS CCA 90 bp AAGTGTTGTCCAAAATGGTTTCAAACTGGGAGCTGTACACGTCGGTaGAGTCCTCCGTATATCCAGGCCCAAGGATGTCTTCATCTTCCC +
Preference number: 5 (lower is better)
Translates to: KCCPKWFQTGSCTRR*SPPYIQAQGCLHLP
Trigger: GGGAAGATGAAGACATCCTTGGGCCTGGATATACGGAGGACTCCACCGACGTGTACAGCTCCCAGTTTGAAACCATTTTGGACAACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TCTGACACGTTACGCTTGACTTTGGCAGTGATTGGAGAAGTATCCGGGTTCAGCGTTTTCACCCCAGCATaGCAGCAACCATACAGACAC +
Preference number: 5 (lower is better)
Translates to: SDTLRLTLAVIGEVSGFSVFTPA*QQPYRH
Trigger: GTGTCTGTATGGTTGCTGCAATGCTGGGGTGAAAAC...GCTGAACCCGGATACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGAGCTTCTAGCCGTGTaGTTTTCACCCCAGCATTGC +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGELLAV*FSPQHC
Trigger: GCAATGCTGGGGTGAAAACAACACGGCTAGAAGCTC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACGTTTGGCCAACCTTTaGGCTGCTTCCACATTGCTG +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGRLANL*AASTLL
Trigger: CAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAACG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTGTACACAGCAGCATTaGGATCATGAGGAATGTCCA +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQCTQQH*DHEECP
Trigger: TGGACATTCCTCATGATCCAAATGCTGCTGTGTACA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTGTACACAGCAGCATTaGGATCATGAGGAATGTCCA +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVCTQQH*DHEECP
Trigger: TGGACATTCCTCATGATCCAAATGCTGCTGTGTACA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGCCAAGAATCCACTTTaGTACACAGCAGCATTTGGA +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQAKNPL*YTAAFG
Trigger: TCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTTACTCAGTAGCTCTTaGCCTCCTTCCTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLLSSS*PPSLRM
Trigger: CATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCTTACTCAGTAGCTCTTaGCCTCCTTCCTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVLLSSS*PPSLRM
Trigger: CATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAA...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGACGTTACGCTTGACTTaGGCAGTGATTGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQTLRLT*AVIGEV
Trigger: TACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCAGGGAGCTATGCCCTaGGTATTGCACACAGTACAC +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWQGAMP*VLHTVH
Trigger: GTGTACTGTGTGCAATACCAAGGGCATAGCTCCCTG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCACTAGAAACAGCATCTaGGTCCAGTACCTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVTRNSI*VQYLCS
Trigger: GCTACAAAGGTACTGGACCAAGATGCTGTTTCTAGT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTTCTTTAATGCGCTGTaGTATCATTGGAGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQFFNAL*YHWSEG
Trigger: CCCCTCACTCCAATGATACAACAGCGCATTAAAGAA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTATTCCACCCTGGCCCTaGGAAAACATCTGTGATGCA +
Preference number: 5 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSIPPWP*ENICDA
Trigger: TGCATCACAGATGTTTTCCAAGGGCCAGGGTGGAAT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGCAGCTCTGCCACCTaGGAAAATGATGCACACCAG +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSSSAT*ENDAHQ
Trigger: CTGGTGTGCATCATTTTCCAAGGTGGCAGAGCTGCT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGCAGGGGAAGTGGCATTaGAAACCCAGGCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKQGKWH*KPRLSL
Trigger: CAAGGACAGCCTGGGTTTCAAATGCCACTTCCCCTG...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCGAGTTGTACAGAGCCTaGTTCTCCTTAGCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVELYRA*FSLAEN
Trigger: GTTTTCTGCTAAGGAGAACAAGGCTCTGTACAACTC...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS TCA 90 bp ACAGCCCCTTTCCTCCCATTATTCATTATCTGGGAAATCTCTGCCTaGGTGTCTCCAGTTAACAGCGCGGTGAGATCTTTCTGGATGCTC +
Preference number: 5 (lower is better)
Translates to: TAPFLPLFIIWEISA*VSPVNSAVRSFWML
Trigger: GAGCATCCAGAAAGATCTCACCGCGCTGTTAACTGGAGACACTCAGGCAGAGATTTCCCAGATAATGAATAATGGGAGGAAAGGGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS TCA 90 bp GTACTTCTAAAGCTGCTTCTGTTGCAAGTACAAACTGCTACACACTaGCTCCGCAGTGACATTCTCCCAGAATGCCACTGGATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: VLLKLLLLQVQTATH*LRSDILPECHWIPQ
Trigger: CTGAGGGATCCAGTGGCATTCTGGGAGAATGTCACTGCGGAGTCAGTGTGTAGCAGTTTGTACTTGCAACAGAAGCAGCTTTAGAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518303.5
ENST00000519851.5
CDS GCA 90 bp ACTCTGGGAATGTGCAGATGCATTGTTCACCCAAACAAATGTCTCTaGCTACAGCACCAAGTAAAACACGTACTGCTGGGGTCCATCCCA +
Preference number: 5 (lower is better)
Translates to: TLGMCRCIVHPNKCL*LQHQVKHVLLGSIP
Trigger: TGGGATGGACCCCAGCAGTACGTGTTTTACTTGGTGCTGTAGGCAGAGACATTTGTTTGGGTGAACAATGCATCTGCACATTCCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520789.1
CDS CCA 90 bp TATTTCACGGAACCTGAGGTCCTCACCCGTACCTTGCTGGCACTCTaGACACTATTCACGCCAATCATTTTCGAAGGTCAACTAAGGAAG +
Preference number: 5 (lower is better)
Translates to: YFTEPEVLTRTLLAL*TLFTPIIFEGQLRK
Trigger: CTTCCTTAGTTGACCTTCGAAAATGATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS CCA 90 bp GAATCACCTGGAATCTTCTTAAAACAGAAACTGAGCAGGTTAAGGTaGGGCCTGGGACTCCGCATTCCTAAAAGTTCCCTGGTGACCATG +
Preference number: 5 (lower is better)
Translates to: ESPGIFLKQKLSRLR*GLGLRIPKSSLVTM
Trigger: CATGGTCACCAGGGAACTTTTAGGAATGCGGAGTCCCAGGCCCCACCTTAACCTGCTCAGTTTCTGTTTTAAGAAGATTCCAGGTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520789.1
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTTGGCTGCTTCCACATaGCTGCTGGTACCATTACTG +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDLAAST*LLVPLL
Trigger: CAGTAATGGTACCAGCAGCAATGTGGAAGCAGCCAA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTGCTTTCAGCAGATCCTaGGAGAAATCAACACCCTCA +
Preference number: 5 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPAFSRS*EKSTPS
Trigger: TGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGC...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAGGCCTTTTCTGGCTaGTATTCATCCTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVKAFSG*YSSFCK
Trigger: CTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTCTGGGCTCTGAGTTaGAAAAAGCAAGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFLWALS*KKQDPP
Trigger: TGGAGGGTCTTGCTTTTTCAAACTCAGAGCCCAGAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTACTCATCGACGTCCTaGGCTTTGACCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDYSSTS*ALTFLS
Trigger: CGACAAGAAGGTCAAAGCCAAGGACGTCGATGAGTA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATTACTCAGTAGCTCTTaGCCTCCTTCCTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: ETAGRWLGLYLTALIWTELLSSS*PPSLRM
Trigger: CATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GCCTCGCTTTCATCGTTACTCAGTAGCTCTTTGCCTCCTTCCTTGAGAATGCTGTCTGACACGTTACGCTaGACTTTGGCAGTGATTGGA +
Preference number: 5 (lower is better)
Translates to: ASLSSLLSSSLPPSLRMLSDTLR*TLAVIG
Trigger: TCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA...CAGCATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAACGATGAAAGCGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLPLYRE*GNRLGA
Trigger: TGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCGRGAP*YRELGN
Trigger: GTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGGAAGGGGTGCTCCCTaGTACCGTGAATTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHGRGAP*YRELGN
Trigger: GTTGCCCAATTCACGGTACAAGGGAGCACCCCTTCC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAAACCTATCTTAGCCTaGGAAAGCCACCCAGATTTT +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQKPILA*ESHPDF
Trigger: AAAATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGAAGCTCAGTGTAACTTaGTGTTTAGGCAGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQKLSVT*CLGSKR
Trigger: CCTCTTACTGCCTAAACACAAAGTTACACTGAGCTT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGCGCCGCGTGCTCTTaGTTGAGCTCCCGGGACTGC +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSAACS*LSSRDC
Trigger: GCAGTCCCGGGAGCTCAACAAAGAGCACGCGGCGCT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327040.13
CDS-3UTR CAA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTGCAGGGAGCGTTTTGTaGACTCTCTGTGTTTTACGA +
Preference number: 5 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPAGSVL*TLCVLR
Trigger: TCGTAAAACACAGAGAGTCAACAAAACGCTCCCTGC...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTACTTTGGAAGACTCTTaGCTGTCAGGAGAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: VIFLPSQASTDAAPREWFTLEDS*LSGEAV
Trigger: AACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCTTAACGTGCTCCTCTaGTTCGCTGATCCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFLNVLL*FADPFP
Trigger: AGGGAAAGGATCAGCGAACAAGAGGAGCACGTTAAG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCTTAACGTGCTCCTCTaGTTCGCTGATCCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDLNVLL*FADPFP
Trigger: AGGGAAAGGATCAGCGAACAAGAGGAGCACGTTAAG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTACAGGAAGTGCCTCCTaGTTTCTTCACTTGTACTCC +
Preference number: 5 (lower is better)
Translates to: VIFLPSQASTDAAPREWFTGSAS*FLHLYS
Trigger: GGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTCCATCCTCGCTGTTGTaGCTGATGGAAAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SLPKTANADSFAIEKEQAPSSLL*LMEKCS
Trigger: TGAGCACTTTTCCATCAGCAACAACAGCGAGGATGG...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS GCA 90 bp CGTGGCACTTTGGAAGACTCTTTGCTGTCAGGAGAGGCTGTTCTTTaGAGTGATGTCTCAAAATCTATAGGATGCTGGGTCTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RGTLEDSLLSGEAVL*SDVSKSIGCWVSLL
Trigger: CAAGAGAGAGACCCAGCATCCTATAGATTTTGAGACATCACTGCAAAGAACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGTGCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 90 bp GGAGAGGCTGTTCTTTGCAGTGATGTCTCAAAATCTATAGGATGCTaGGTCTCTCTCTTGTCTCCTCCTGTCCACAGTATTTCCACTCCT +
Preference number: 5 (lower is better)
Translates to: GEAVLCSDVSKSIGC*VSLLSPPVHSISTP
Trigger: AGGAGTGGAAATACTGTGGACAGGAGGAGACAAGAGAGAGACCCAGCATCCTATAGATTTTGAGACATCACTGCAAAGAACAGCCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 90 bp TCTCCAGGGACTCTGCACTGTAGTATAAAGAAGTGTTGTCCAAAATaGTTTCAAACTGGGAGCTGTACACGTCGGTGGAGTCCTCCGTAT +
Preference number: 5 (lower is better)
Translates to: SPGTLHCSIKKCCPK*FQTGSCTRRWSPPY
Trigger: ATACGGAGGACTCCACCGACGTGTACAGCTCCCAGTTTGAAACCATTTTGGACAACACTTCTTTATACTACAGTGCAGAGTCCCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCTAAATTCGTTGTTCTaGCCAAGGTGTTTTGCAACA +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLNSLF*PRCFAT
Trigger: TGTTGCAAAACACCTTGGCAAGAACAACGAATTTAG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAACTCTCTCTCGTTCTaGAGTTTCTCCCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSNSLSF*SFSHKR
Trigger: TCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGCTTTCAGCAGATCCTaGGAGAAATCAACACCCTCA +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGAFSRS*EKSTPS
Trigger: TGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGGCCACACAATTGATTTaGTTTATCCACCCTTGCATT +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQATQLI*FIHPCI
Trigger: AATGCAAGGGTGGATAAACAAAATCAATTGTGTGGC...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATCTGACACGTTACGCTaGACTTTGGCAGTGATTGGA +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGSDTLR*TLAVIG
Trigger: TCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTTCTGACACGTTACGCTaGACTTTGGCAGTGATTGGA +
Preference number: 5 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVSDTLR*TLAVIG
Trigger: TCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTCTGACACGTTACGCTaGACTTTGGCAGTGATTGGA +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDSDTLR*TLAVIG
Trigger: TCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAAAAGGAGAATGCCTTaGGATTTCAGTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVKRRMP*DFSPSF
Trigger: AAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTTT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGCTATGCCCTTGGTATaGCACACAGTACACTGCAAA +
Preference number: 5 (lower is better)
Translates to: SLPKTANADSFAIEKEQAAMPLV*HTVHCK
Trigger: TTTGCAGTGTACTGTGTGCAATACCAAGGGCATAGC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGCTATGCCCTTGGTATaGCACACAGTACACTGCAAA +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFAMPLV*HTVHCK
Trigger: TTTGCAGTGTACTGTGTGCAATACCAAGGGCATAGC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACAGGGAGCTATGCCCTaGGTATTGCACACAGTACAC +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLQGAMP*VLHTVH
Trigger: GTGTACTGTGTGCAATACCAAGGGCATAGCTCCCTG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATTCCTTGAGATGACTTaGAGAGGGGGCCTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLFLEMT*RGGLSD
Trigger: GTCAGAGAGGCCCCCTCTCAAAGTCATCTCAAGGAA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTACTAGAAACAGCATCTaGGTCCAGTACCTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSTRNSI*VQYLCS
Trigger: GCTACAAAGGTACTGGACCAAGATGCTGTTTCTAGT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGGCAGGGAGCGTTTTGTaGACTCTCTGTGTTTTACGA +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWAGSVL*TLCVLR
Trigger: TCGTAAAACACAGAGAGTCAACAAAACGCTCCCTGC...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACCAGCAGGGAGCGTTTaGTTGACTCTCTGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGPAGSV*LTLCVL
Trigger: TAAAACACAGAGAGTCAACAAAACGCTCCCTGCTGG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATCCAGCAGGGAGCGTTTaGTTGACTCTCTGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDPAGSV*LTLCVL
Trigger: TAAAACACAGAGAGTCAACAAAACGCTCCCTGCTGG...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTGCTGGGTCTCTCTCTaGTCTCCTCCTGTCCACAGT +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCCWVSL*SPPVHS
Trigger: ACTGTGGACAGGAGGAGACAAGAGAGAGACCCAGCA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTTTCTTTAATGCGCTGTaGTATCATTGGAGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: VIFLPSQASTDAAPREWFFFNAL*YHWSEG
Trigger: CCCCTCACTCCAATGATACAACAGCGCATTAAAGAA...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTTTCTTTAATGCGCTGTaGTATCATTGGAGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSFFNAL*YHWSEG
Trigger: CCCCTCACTCCAATGATACAACAGCGCATTAAAGAA...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCACCACGAGAGTGGTTaGATCTCCCGTAAAACATAC +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWHHESG*ISRKTY
Trigger: GTATGTTTTACGGGAGATCAAACCACTCTCGTGGTG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAATCCTTGTTTCTTCACTaGTACTCCTCTCTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: ETAGRWLGLYLTALIWTESLFLH*YSSLKG
Trigger: TCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGA...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTTTTCCATCCTCGCTGTaGTTGCTGATGGAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: SLPKTANADSFAIEKEQAFPSSL*LLMEKC
Trigger: GCACTTTTCCATCAGCAACAACAGCGAGGATGGAAA...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGATTTCCATCCTCGCTGTaGTTGCTGATGGAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGFPSSL*LLMEKC
Trigger: GCACTTTTCCATCAGCAACAACAGCGAGGATGGAAA...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS TCA 90 bp CACTTTGGAAGACTCTTTGCTGTCAGGAGAGGCTGTTCTTTGCAGTaGTGTCTCAAAATCTATAGGATGCTGGGTCTCTCTCTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: HFGRLFAVRRGCSLQ*CLKIYRMLGLSLVS
Trigger: GGAGACAAGAGAGAGACCCAGCATCCTATAGATTTTGAGACATCACTGCAAAGAACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 90 bp TCAGGAGAGGCTGTTCTTTGCAGTGATGTCTCAAAATCTATAGGATaGTGGGTCTCTCTCTTGTCTCCTCCTGTCCACAGTATTTCCACT +
Preference number: 5 (lower is better)
Translates to: SGEAVLCSDVSKSIG*WVSLLSPPVHSIST
Trigger: AGTGGAAATACTGTGGACAGGAGGAGACAAGAGAGAGACCCAGCATCCTATAGATTTTGAGACATCACTGCAAAGAACAGCCTCTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCGTTTGGCCAACCTTTaGGCTGCTTCCACATTGCTG +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCRLANL*AASTLL
Trigger: CAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAACG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGGTATCTCGTTTGGCCAACCTTTaGGCTGCTTCCACATTGCTG +
Preference number: 5 (lower is better)
Translates to: SIIAQVRQWTPSCEAMVSRLANL*AASTLL
Trigger: CAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAACG...AGATACCATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CAA 90 bp GGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTGGACGTTTGGCCAACCTTTaGGCTGCTTCCACATTGCTG +
Preference number: 5 (lower is better)
Translates to: GSFKFKHVWFLLIVRGLGRLANL*AASTLL
Trigger: CAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAACG...TCCAAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAACTAAATTCGTTGTTCTaGCCAAGGTGTTTTGCAACA +
Preference number: 5 (lower is better)
Translates to: ETAGRWLGLYLTALIWTELNSLF*PRCFAT
Trigger: TGTTGCAAAACACCTTGGCAAGAACAACGAATTTAG...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAACTCTCTCTCGTTCTaGAGTTTCTCCCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDNSLSF*SFSHKR
Trigger: TCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTGTACACAGCAGCATTaGGATCATGAGGAATGTCCA +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDCTQQH*DHEECP
Trigger: TGGACATTCCTCATGATCCAAATGCTGCTGTGTACA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGCCAAGAATCCACTTTaGTACACAGCAGCATTTGGA +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDAKNPL*YTAAFG
Trigger: TCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGCTTGTATTCATCCTTTaGCAAGTAAAGAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQLVFIL*QVKNCS
Trigger: GGAACAGTTCTTTACTTGCAAAAGGATGAATACAAG...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACTCTGGGCTCTGAGTTaGAAAAAGCAAGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLWALS*KKQDPP
Trigger: TGGAGGGTCTTGCTTTTTCAAACTCAGAGCCCAGAG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTACAGCTGCCACACAATaGATTTTGTTTATCCACCCT +
Preference number: 5 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPTAATQ*ILFIHP
Trigger: AGGGTGGATAAACAAAATCAATTGTGTGGCAGCTGT...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTATACTCATCGACGTCCTaGGCTTTGACCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLYSSTS*ALTFLS
Trigger: CGACAAGAAGGTCAAAGCCAAGGACGTCGATGAGTA...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTCTGACACGTTACGCTaGACTTTGGCAGTGATTGGA +
Preference number: 5 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKSDTLR*TLAVIG
Trigger: TCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGTCAGAAAGACAGATAACTaGCTTGTGGATATGTTGGAT +
Preference number: 5 (lower is better)
Translates to: RGVLSPCAKDGQHHATAVRKTDN*LVDMLD
Trigger: ATCCAACATATCCACAAGCAAGTTATCTGTCTTTCT...GACTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCCCTTGTACCGTGAATaGGGCAACAGGCTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIPLYRE*GNRLGA
Trigger: TGCTCCAAGCCTGTTGCCCAATTCACGGTACAAGGG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCAGGGAGCTATGCCCTaGGTATTGCACACAGTACAC +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHQGAMP*VLHTVH
Trigger: GTGTACTGTGTGCAATACCAAGGGCATAGCTCCCTG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGTCCTTAATCGAGCCTaGGGCTGGGACTCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIVLNRA*GWDSSR
Trigger: CCTAGAAGAGTCCCAGCCCAAGGCTCGATTAAGGAC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GAAGAGGTGTTCTCAGCCCATGCGCTAAAGATGGACAGCATCATGCTACGGCAGACAATGCCAATTAGTTaGAGCCACAGTGAATATAAC +
Preference number: 5 (lower is better)
Translates to: EEVFSAHALKMDSIMLRQTMPIS*SHSEYN
Trigger: GTTATATTCACTGTGGCTCAAACTAATTGGCATTGT...CTGCCGTAGCATGATGCTGTCCATCTTTAGCGCATGGGCTGAGAACACCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS TCA 90 bp TATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCTaGGGACAGGTGCCCATTTGGTTTCAGCATCTTCTCCAATCCCAC +
Preference number: 5 (lower is better)
Translates to: YGERHLQYFSVVCDL*GQVPIWFQHLLQSH
Trigger: GTGGGATTGGAGAAGATGCTGAAACCAAATGGGCACCTGTCCTCAGAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGTTTTCACCCCAGCATaGCAGCAACCATACAGACAC +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCVFTPA*QQPYRH
Trigger: GTGTCTGTATGGTTGCTGCAATGCTGGGGTGAAAAC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286485.12
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGAGCTTCTAGCCGTGTaGTTTTCACCCCAGCATTGC +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLELLAV*FSPQHC
Trigger: GCAATGCTGGGGTGAAAACAACACGGCTAGAAGCTC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTGGCTGCTTCCACATaGCTGCTGGTACCATTACTG +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCLAAST*LLVPLL
Trigger: CAGTAATGGTACCAGCAGCAATGTGGAAGCAGCCAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTTGGCTGCTTCCACATaGCTGCTGGTACCATTACTG +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLAAST*LLVPLL
Trigger: CAGTAATGGTACCAGCAGCAATGTGGAAGCAGCCAA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GATGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGCTAAATTCGTTGTTCTaGCCAAGGTGTTTTGCAACA +
Preference number: 5 (lower is better)
Translates to: DANAWCTLTAFFKSSSDKLNSLF*PRCFAT
Trigger: TGTTGCAAAACACCTTGGCAAGAACAACGAATTTAG...CTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp TGCCAATGCGTGGTGCACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCCTTGTATTCATCCTTTaGCAAGTAAAGAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: CQCVVHTHSVFQVLFRQGLVFIL*QVKNCS
Trigger: GGAACAGTTCTTTACTTGCAAAAGGATGAATACAAG...GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAGGCCTTTTCTGGCTaGTATTCATCCTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFKAFSG*YSSFCK
Trigger: CTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGACAGCTGCCACACAATaGATTTTGTTTATCCACCCT +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWTAATQ*ILFIHP
Trigger: AGGGTGGATAAACAAAATCAATTGTGTGGCAGCTGT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCACAGCTGCCACACAATaGATTTTGTTTATCCACCCT +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFTAATQ*ILFIHP
Trigger: AGGGTGGATAAACAAAATCAATTGTGTGGCAGCTGT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAACAGCTGCCACACAATaGATTTTGTTTATCCACCCT +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGTAATQ*ILFIHP
Trigger: AGGGTGGATAAACAAAATCAATTGTGTGGCAGCTGT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000518315.5
ENST00000523619.5
CDS-3UTR CAA 90 bp AAAAATGGGTTAGTAGTACTTCCAATACGACTGATGGTCTTTGGATGTGTTCCGTCTTCTGAGAGCCGATaGCTGCTGGAAATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KNGLVVLPIRLMVFGCVPSSESR*LLEMVV
Trigger: CACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGA...CGGAACACATCCAAAGACCATCAGTCGTATTGGAAGTACTACTAACCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp ATACGACTGATGGTCTTTGGATGTGTTCCGTTAGCTTTCTCCTCAGTACTTTCTTACTCATCGACGTCCTaGGCTTTGACCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: IRLMVFGCVPLAFSSVLSYSSTS*ALTFLS
Trigger: CGACAAGAAGGTCAAAGCCAAGGACGTCGATGAGTA...AGAAAGTACTGAGGAGAAAGCTAACGGAACACATCCAAAGACCATCAGTCGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCTATTAGTTCTGAAGTaGTGCCACTTGCGGAGATTT +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWLLVLK*CHLRRF
Trigger: AAATCTCCGCAAGTGGCACAACTTCAGAACTAATAG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGACTATTAGTTCTGAAGTaGTGCCACTTGCGGAGATTT +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGLLVLK*CHLRRF
Trigger: AAATCTCCGCAAGTGGCACAACTTCAGAACTAATAG...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPDTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAGAAAGACAGATAACTaGCTTGTGGATATGTTGGAT +
Preference number: 5 (lower is better)
Translates to: ETAGRWLGLYLTALIWTERKTDN*LVDMLD
Trigger: ATCCAACATATCCACAAGCAAGTTATCTGTCTTTCT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTCCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 5 (lower is better)
Translates to: VIFLPSQASTDAAPREWFPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTTCCTCATGTCACTTTaGCCCAGGGGCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTFLMSL*PRGQSS
Trigger: TGAGGACTGGCCCCTGGGCAAAAGTGACATGAGGAA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAAACCTATCTTAGCCTaGGAAAGCCACCCAGATTTT +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGKPILA*ESHPDF
Trigger: AAAATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAGCTCAGTGTAACTTaGTGTTTAGGCAGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFKLSVT*CLGSKR
Trigger: CCTCTTACTGCCTAAACACAAAGTTACACTGAGCTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAAGCTCAGTGTAACTTaGTGTTTAGGCAGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDKLSVT*CLGSKR
Trigger: CCTCTTACTGCCTAAACACAAAGTTACACTGAGCTT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAAGCTCAGTGTAACTTaGTGTTTAGGCAGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGKLSVT*CLGSKR
Trigger: CCTCTTACTGCCTAAACACAAAGTTACACTGAGCTT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GTGATATTTCTTCCAAGTCAAGCGAGTACGGATGCGGCACCACGAGAGTGGTTTAAAAGGAGAATGCCTTaGGATTTCAGTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: VIFLPSQASTDAAPREWFKRRMP*DFSPSF
Trigger: AAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTTT...AAACCACTCTCGTGGTGCCGCATCCGTACTCGCTTGACTTGGAAGAAATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGTGACAGCATTTTCTTaGATGACTGACATACTGCCT +
Preference number: 5 (lower is better)
Translates to: SLPKTANADSFAIEKEQAVTAFS*MTDILP
Trigger: AGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCAC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATGTGACAGCATTTTCTTaGATGACTGACATACTGCCT +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDVTAFS*MTDILP
Trigger: AGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCAC...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGTGACAGCATTTTCTTaGATGACTGACATACTGCCT +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFVTAFS*MTDILP
Trigger: AGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCAC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCGAATGTGCAGATGCATaGTTCACCCAAACAAATGTC +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFECADA*FTQTNV
Trigger: GACATTTGTTTGGGTGAACAATGCATCTGCACATTC...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAATTCATATTTGGCCTaGGCAACACTCTGGGAATGT +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFNSYLA*ATLWEC
Trigger: ACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GAGACTGCAGGGAGGTGGTTAGGCCTTTACCTAACAGCTCTGATCTGGACTGAAAATAAAAATTCATATTaGGCCTTGGCAACACTCTGG +
Preference number: 5 (lower is better)
Translates to: ETAGRWLGLYLTALIWTENKNSY*ALATLW
Trigger: CCAGAGTGTTGCCAAGGCCAAATATGAATTTTTATT...TTCAGTCCAGATCAGAGCTGTTAGGTAAAGGCCTAACCACCTCCCTGCAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GAGAGGTTCCTCTTTGCAGAGATGATGTGTTATCACCACTCTCTGCAGGGCTCTAAAAACTTTCCTCCGTaGTTACTTCAGCTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: ERFLFAEMMCYHHSLQGSKNFPP*LLQLKE
Trigger: CTCTTTCAGCTGAAGTAACAACGGAGGAAAGTTTTT...AGAGCCCTGCAGAGAGTGGTGATAACACATCATCTCTGCAAAGAGGAACCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTGCTGGGTCTCTCTCTaGTCTCCTCCTGTCCACAGT +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGCWVSL*SPPVHS
Trigger: ACTGTGGACAGGAGGAGACAAGAGAGAGACCCAGCA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGATGGCGTGGCACTTaGGAAGACTCTTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCRWRGT*EDSLLS
Trigger: TGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGTCCTCACCCGTACCTaGCTGGCACTCTGGACACTA +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMVLTRT*LALWTL
Trigger: TAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGAC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCATTCTTGATTGAGTaGTACAGAGCCTTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFSFLIE*YRALFS
Trigger: GGAGAACAAGGCTCTGTACAACTCAATCAAGAATGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS TCA 90 bp CATTCTCAGTTAAACTACTTGAATTACACAAACCAGCTGATGAGATaGGATGGCGTGGCACTTTGGAAGACTCTTTGCTGTCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: HSQLNYLNYTNQLMR*DGVALWKTLCCQER
Trigger: CCTCTCCTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTTTGTGTAATTCAAGTAGTTTAACTGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 90 bp TCAGTTAAACTACTTGAATTACACAAACCAGCTGATGAGATGAGATaGCGTGGCACTTTGGAAGACTCTTTGCTGTCAGGAGAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SVKLLELHKPADEMR*RGTLEDSLLSGEAV
Trigger: AACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTTTGTGTAATTCAAGTAGTTTAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 90 bp CTCTCGACCAATGGTCTTCGTACTCTGTTGTATATACGAATCACCTaGAATCTTCTTAAAACAGAAACTGAGCAGGTTAAGGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: LSTNGLRTLLYIRIT*NLLKTETEQVKVGP
Trigger: AGGCCCCACCTTAACCTGCTCAGTTTCTGTTTTAAGAAGATTCCAGGTGATTCGTATATACAACAGAGTACGAAGACCATTGGTCGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520789.1
CDS-3UTR CAA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGGTTTTCACCCCAGCATaGCAGCAACCATACAGACAC +
Preference number: 5 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMVFTPA*QQPYRH
Trigger: GTGTCTGTATGGTTGCTGCAATGCTGGGGTGAAAAC...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CAA 90 bp TGTAGATCGGTATTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTTGGCTGCTTCCACATaGCTGCTGGTACCATTACTG +
Preference number: 5 (lower is better)
Translates to: CRSVLRSIIAQVRQWTPSLAAST*LLVPLL
Trigger: CAGTAATGGTACCAGCAGCAATGTGGAAGCAGCCAA...AGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATATCTTCTTTCCAATATaGTGGCCATGTAGATCGGTA +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDIFFPI*WPCRSV
Trigger: TACCGATCTACATGGCCACAATATTGGAAAGAAGAT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000523619.5
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCATCTTCTTTCCAATATaGTGGCCATGTAGATCGGTA +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFIFFPI*WPCRSV
Trigger: TACCGATCTACATGGCCACAATATTGGAAAGAAGAT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000523619.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGCTTTCAGCAGATCCTaGGAGAAATCAACACCCTCA +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCAFSRS*EKSTPS
Trigger: TGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACGTTTGTTCATGTGCCACGCTCAGTGACTCAGTCACTCTCGGAGTTGATACCTCTTGTATTCATCCTTTaGCAAGTAAAGAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: TFVHVPRSVTQSLSELIPLVFIL*QVKNCS
Trigger: GGAACAGTTCTTTACTTGCAAAAGGATGAATACAAG...AGGTATCAACTCCGAGAGTGACTGAGTCACTGAGCGTGGCACATGAACAAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTCTGGGCTCTGAGTTaGAAAAAGCAAGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILWALS*KKQDPP
Trigger: TGGAGGGTCTTGCTTTTTCAAACTCAGAGCCCAGAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CCATCCTCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTCTCTGGGCTCTGAGTTaGAAAAAGCAAGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: PSSFSSWSLLSIHICMNFLWALS*KKQDPP
Trigger: TGGAGGGTCTTGCTTTTTCAAACTCAGAGCCCAGAG...AAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGCCACACAATTGATTTaGTTTATCCACCCTTGCATT +
Preference number: 5 (lower is better)
Translates to: SLPKTANADSFAIEKEQAATQLI*FIHPCI
Trigger: AATGCAAGGGTGGATAAACAAAATCAATTGTGTGGC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTCTTCTGAGAGCCGATaGCTGCTGGAAATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGSSESR*LLEMVV
Trigger: CACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTACTCATCGACGTCCTaGGCTTTGACCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLYSSTS*ALTFLS
Trigger: CGACAAGAAGGTCAAAGCCAAGGACGTCGATGAGTA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATTACTCAGTAGCTCTTaGCCTCCTTCCTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLLSSS*PPSLRM
Trigger: CATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAACGTTACGCTTGACTTaGGCAGTGATTGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLTLRLT*AVIGEV
Trigger: TACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTCCTCTTTCCCTTGCTaGGCTGAAATGGAATCAGCA +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHSSFPC*AEMESA
Trigger: TGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGGA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTCCTCTTTCCCTTGCTaGGCTGAAATGGAATCAGCA +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSSFPC*AEMESA
Trigger: TGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGGA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCTCAAGGGCCGATTATaGCCCCCATCCTTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILKGRL*PPSFSK
Trigger: TTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: SLPKTANADSFAIEKEQADTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGRQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGAAACCTATCTTAGCCTaGGAAAGCCACCCAGATTTT +
Preference number: 5 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKKPILA*ESHPDF
Trigger: AAAATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTT...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAAAGGAGAATGCCTTaGGATTTCAGTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFKRRMP*DFSPSF
Trigger: AAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCAGGGAGCTATGCCCTaGGTATTGCACACAGTACAC +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGQGAMP*VLHTVH
Trigger: GTGTACTGTGTGCAATACCAAGGGCATAGCTCCCTG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCAGGGAGCTATGCCCTaGGTATTGCACACAGTACAC +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTQGAMP*VLHTVH
Trigger: GTGTACTGTGTGCAATACCAAGGGCATAGCTCCCTG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGCAGGGAGCGTTTTGTaGACTCTCTGTGTTTTACGA +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCAGSVL*TLCVLR
Trigger: TCGTAAAACACAGAGAGTCAACAAAACGCTCCCTGC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCAAAAACTTTCCTCCGTaGTTACTTCAGCTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFKNFPP*LLQLKE
Trigger: CTCTTTCAGCTGAAGTAACAACGGAGGAAAGTTTTT...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTACTTTGGAAGACTCTTaGCTGTCAGGAGAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCTLEDS*LSGEAV
Trigger: AACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTCCTTGTTTCTTCACTaGTACTCCTCTCTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKSLFLH*YSSLKG
Trigger: TCCTTTGAGAGAGGAGTACAAGTGAAGAAACAAGGA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS CCA 90 bp TATCTGGAGCTTTCCCTTCAGATCTGCCAAATAAAAATTCATATTTaGCCTTGGCAACACTCTGGGAATGTGCAGATGCATTGTTCACCC +
Preference number: 5 (lower is better)
Translates to: YLELSLQICQIKIHI*PWQHSGNVQMHCSP
Trigger: GGGTGAACAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATTTTTATTTGGCAGATCTGAAGGGAAAGCTCCAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000520789.1
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATAGTTTGCTAAATTCGTaGTTCTTGCCAAGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDSLLNS*FLPRCF
Trigger: AAAACACCTTGGCAAGAACAACGAATTTAGCAAACT...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CTTGGCCACAGGGTGAAATACAAACCTATCTTAGCCTTGGAAAGCCACCCAGATTCTTCTGCAACTAGTTaGCTAAATTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LGHRVKYKPILALESHPDSSATS*LNSLFL
Trigger: CAAGAACAACGAATTTAGCAAACTAGTTGCAGAAGA...ATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTTGTATTTCACCCTGTGGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTCCGAGCAACTCTCTCTCGTTCTaGAGTTTCTCCCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: SFSSWSLLSIHICMNFPSNSLSF*SFSHKR
Trigger: TCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTT...GCTCGGAAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGCCAAGAATCCACTTTaGTACACAGCAGCATTTGGA +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHAKNPL*YTAAFG
Trigger: TCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GTCGGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTGCCAAGAATCCACTTTaGTACACAGCAGCATTTGGA +
Preference number: 5 (lower is better)
Translates to: VGSFKFKHVWFLLIVRGLAKNPL*YTAAFG
Trigger: TCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGC...AAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp AGCTTACCCAAAACTGCTAATGCCGACAGTTTCGCCATTGAAAAGGAGCAGGCTCTTGTATTCATCCTTTaGCAAGTAAAGAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: SLPKTANADSFAIEKEQALVFIL*QVKNCS
Trigger: GGAACAGTTCTTTACTTGCAAAAGGATGAATACAAG...AGCCTGCTCCTTTTCAATGGCGAAACTGTCGGCATTAGCAGTTTTGGGTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAAGGCCTTTTCTGGCTaGTATTCATCCTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLKAFSG*YSSFCK
Trigger: CTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACACTCACAGCGTTTTTCAAGTCCTCTTCAGACAAGGCCTTTTCTGGCTTGTATAAGGCCTTTTCTGGCTaGTATTCATCCTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: TLTAFFKSSSDKAFSGLYKAFSG*YSSFCK
Trigger: CTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTT...ATACAAGCCAGAAAAGGCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCTCTGGGCTCTGAGTTaGAAAAAGCAAGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLWALS*KKQDPP
Trigger: TGGAGGGTCTTGCTTTTTCAAACTCAGAGCCCAGAG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCTCTGGGCTCTGAGTTaGAAAAAGCAAGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLWALS*KKQDPP
Trigger: TGGAGGGTCTTGCTTTTTCAAACTCAGAGCCCAGAG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCTTCTGAGAGCCGATaGCTGCTGGAAATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSSESR*LLEMVV
Trigger: CACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATTTACTCAGTAGCTCTTaGCCTCCTTCCTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLLSSS*PPSLRM
Trigger: CATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAA...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCTGACACGTTACGCTaGACTTTGGCAGTGATTGGA +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSDTLR*TLAVIG
Trigger: TCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLRAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAAAACCTATCTTAGCCTaGGAAAGCCACCCAGATTTT +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLKPILA*ESHPDF
Trigger: AAAATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGAAACCCAAAAGGTTTaGTTAGTAAGACAATGGAGA +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGETQKV*LVRQWR
Trigger: TCTCCATTGTCTTACTAACAAAACCTTTTGGGTTTC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGCTATGCCCTTGGTATaGCACACAGTACACTGCAAA +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIAMPLV*HTVHCK
Trigger: TTTGCAGTGTACTGTGTGCAATACCAAGGGCATAGC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGCTATGCCCTTGGTATaGCACACAGTACACTGCAAA +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLAMPLV*HTVHCK
Trigger: TTTGCAGTGTACTGTGTGCAATACCAAGGGCATAGC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCAGGGAGCTATGCCCTaGGTATTGCACACAGTACAC +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMQGAMP*VLHTVH
Trigger: GTGTACTGTGTGCAATACCAAGGGCATAGCTCCCTG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGAATAAAAATTCATATTaGGCCTTGGCAACACTCTGG +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWNKNSY*ALATLW
Trigger: CCAGAGTGTTGCCAAGGCCAAATATGAATTTTTATT...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTTCCTTGAGATGACTTaGAGAGGGGGCCTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMFLEMT*RGGLSD
Trigger: GTCAGAGAGGCCCCCTCTCAAAGTCATCTCAAGGAA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCCAGCAGGGAGCGTTTaGTTGACTCTCTGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLPAGSV*LTLCVL
Trigger: TAAAACACAGAGAGTCAACAAAACGCTCCCTGCTGG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAGATGGCGTGGCACTTaGGAAGACTCTTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGRWRGT*EDSLLS
Trigger: TGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTTCTCAGTTAAACTACTaGAATTACACAAACCAGCTG +
Preference number: 5 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVSQLNY*NYTNQL
Trigger: CAGCTGGTTTGTGTAATTCAAGTAGTTTAACTGAGA...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TATAATGCATCTCAAAGTCAGACACTAGAGCTCAGATTCCACCCTGGCCCTTGGTCTCAGTTAAACTACTaGAATTACACAAACCAGCTG +
Preference number: 5 (lower is better)
Translates to: YNASQSQTLELRFHPGPWSQLNY*NYTNQL
Trigger: CAGCTGGTTTGTGTAATTCAAGTAGTTTAACTGAGA...CCAAGGGCCAGGGTGGAATCTGAGCTCTAGTGTCTGACTTTGAGATGCATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTGGTTGGCTATGGGCCAGACTCTCAGAATCTAGGCAAATCAGTGACTGTTTCTCTCAGTTAAACTACTaGAATTACACAAACCAGCTG +
Preference number: 5 (lower is better)
Translates to: CGWLWARLSESRQISDCFSQLNY*NYTNQL
Trigger: CAGCTGGTTTGTGTAATTCAAGTAGTTTAACTGAGA...GAAACAGTCACTGATTTGCCTAGATTCTGAGAGTCTGGCCCATAGCCAACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCCACCACGAGAGTGGTTaGATCTCCCGTAAAACATAC +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIHHESG*ISRKTY
Trigger: GTATGTTTTACGGGAGATCAAACCACTCTCGTGGTG...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ATCTTGAAAAACCCTATTTTGCTCCATGACCAGCACTTCCTGGCCGCAGATGGAGAATATTCTGGCTCTTaGCATCTTAAGGTCTTATGT +
Preference number: 5 (lower is better)
Translates to: ILKNPILLHDQHFLAADGEYSGS*HLKVLC
Trigger: ACATAAGACCTTAAGATGCAAAGAGCCAGAATATTC...TCCATCTGCGGCCAGGAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp CCAGTACGTGTTATAGTACCGCCAGCTTACCCAAAACTGCTAATGCCGACAGTTGAATATTCTGGCTCTTaGCATCTTAAGGTCTTATGT +
Preference number: 5 (lower is better)
Translates to: PVRVIVPPAYPKLLMPTVEYSGS*HLKVLC
Trigger: ACATAAGACCTTAAGATGCAAAGAGCCAGAATATTC...AACTGTCGGCATTAGCAGTTTTGGGTAAGCTGGCGGTACTATAACACGTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTATTCCACCCTGGCCCTaGGAAAACATCTGTGATGCA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTIPPWP*ENICDA
Trigger: TGCATCACAGATGTTTTCCAAGGGCCAGGGTGGAAT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGACAGGAAGTGCCTCCTaGTTTCTTCACTTGTACTCC +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLTGSAS*FLHLYS
Trigger: GGAGTACAAGTGAAGAAACAAGGAGGCACTTCCTGT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGCCATCCTCGCTGTTGTaGCTGATGGAAAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGPSSLL*LMEKCS
Trigger: TGAGCACTTTTCCATCAGCAACAACAGCGAGGATGG...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGAGTTGTACAGAGCCTaGTTCTCCTTAGCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCELYRA*FSLAEN
Trigger: GTTTTCTGCTAAGGAGAACAAGGCTCTGTACAACTC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS TCA 90 bp AAATCAACACCCTCATTTACCCCTTGCAGATTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCAATATTGTGGCCATGTAGATCGGTA +
Preference number: 5 (lower is better)
Translates to: KSTPSFTPCRFAMNS*QVIFFPILWPCRSV
Trigger: TACCGATCTACATGGCCACAATATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGGTGTTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000519851.5
ENST00000520858.5
ENST00000523619.5
CDS TCA 90 bp AAATCAACACCCTCATTTACCCCTTGCAGATTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCAATATTTACGTGGCCATGTAGATCG +
Preference number: 5 (lower is better)
Translates to: KSTPSFTPCRFAMNS*QVIFFPIFTWPCRS
Trigger: CGATCTACATGGCCACGTAAATATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGGTGTTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440756.4
CDS CCA 90 bp GAGCTTTCCCTTCAGATCTGCCAAATAAAAATTCATATTTGGCCTTaGCAACACTCTGGGAATGTGCAGATGCATTGTTCACCCAAACAA +
Preference number: 5 (lower is better)
Translates to: ELSLQICQIKIHIWP*QHSGNVQMHCSPKQ
Trigger: TTGTTTGGGTGAACAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATTTTTATTTGGCAGATCTGAAGGGAAAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000520789.1
ENST00000521475.1
CDS CCA 90 bp AGCCCGACATGTTTTGGATCTAAGTTTCACAAATCCACACTTACGTaGCCATGTAGATCGGTATTAAGAAGCATTATTGCACAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: SPTCFGSKFHKSTLT*PCRSVLRSIIAQVR
Trigger: CCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACATGGCCACGTAAGTGTGGATTTGTGAAACTTAGATCCAAAACATGTCGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518963.5
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCCGTTTGGCCAACCTTTaGGCTGCTTCCACATTGCTG +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLRLANL*AASTLL
Trigger: CAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAACG...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACTAAATTCGTTGTTCTaGCCAAGGTGTTTTGCAACA +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLNSLF*PRCFAT
Trigger: TGTTGCAAAACACCTTGGCAAGAACAACGAATTTAG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CTGAATCTCAGGAGGAGAGGACTAACCACATGCATGGTTACCCTAAATGGAAAGTCTTCTGCAACTAGTTaGCTAAATTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LNLRRRGLTTCMVTLNGKSSATS*LNSLFL
Trigger: CAAGAACAACGAATTTAGCAAACTAGTTGCAGAAGA...CTTTCCATTTAGGGTAACCATGCATGTGGTTAGTCCTCTCCTCCTGAGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAACTCTCTCTCGTTCTaGAGTTTCTCCCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLNSLSF*SFSHKR
Trigger: TCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGCTTTCAGCAGATCCTaGGAGAAATCAACACCCTCA +
Preference number: 5 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRAFSRS*EKSTPS
Trigger: TGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TTCAGACAAGGCCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTGCTTTCAGCAGATCCTaGGAGAAATCAACACCCTCA +
Preference number: 5 (lower is better)
Translates to: FRQGLFWLVFILLQVKNCAFSRS*EKSTPS
Trigger: TGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGC...ACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTGTACACAGCAGCATTaGGATCATGAGGAATGTCCA +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLCTQQH*DHEECP
Trigger: TGGACATTCCTCATGATCCAAATGCTGCTGTGTACA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTTACCCCTTGCAGATTTGCAATGAACTCCTGACAGGTCATCTTCTTTCCAATTGTACACAGCAGCATTaGGATCATGAGGAATGTCCA +
Preference number: 5 (lower is better)
Translates to: IYPLQICNELLTGHLLSNCTQQH*DHEECP
Trigger: TGGACATTCCTCATGATCCAAATGCTGCTGTGTACA...ATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAGGCCTTTTCTGGCTaGTATTCATCCTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKAFSG*YSSFCK
Trigger: CTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATACAGCTGCCACACAATaGATTTTGTTTATCCACCCT +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHTAATQ*ILFIHP
Trigger: AGGGTGGATAAACAAAATCAATTGTGTGGCAGCTGT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCACGTTACGCTTGACTTaGGCAGTGATTGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGITLRLT*AVIGEV
Trigger: TACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GTCGGCAGTTTTAAGTTTAAACACGTTTGGTTTCTTCTCATAGTCCGTGGCCTTTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: VGSFKFKHVWFLLIVRGLLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...AAGGCCACGGACTATGAGAAGAAACCAAACGTGTTTAAACTTAAAACTGCCGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTCCTCTTTCCCTTGCTaGGCTGAAATGGAATCAGCA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSSFPC*AEMESA
Trigger: TGCTGATTCCATTTCAGCCAAGCAAGGGAAAGAGGA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCTCAAGGGCCGATTATaGCCCCCATCCTTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLKGRL*PPSFSK
Trigger: TTTGCTAAAGGATGGGGGCAATAATCGGCCCTTGAG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATCTATTAGTTCTGAAGTaGTGCCACTTGCGGAGATTT +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHLLVLK*CHLRRF
Trigger: AAATCTCCGCAAGTGGCACAACTTCAGAACTAATAG...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTACCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 5 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGTGACAGCATTTTCTTaGATGACTGACATACTGCCT +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHVTAFS*MTDILP
Trigger: AGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCAC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGCTATGCCCTTGGTATaGCACACAGTACACTGCAAA +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGAMPLV*HTVHCK
Trigger: TTTGCAGTGTACTGTGTGCAATACCAAGGGCATAGC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGCTATGCCCTTGGTATaGCACACAGTACACTGCAAA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTAMPLV*HTVHCK
Trigger: TTTGCAGTGTACTGTGTGCAATACCAAGGGCATAGC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGACTTTGGAAGACTCTTaGCTGTCAGGAGAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGTLEDS*LSGEAV
Trigger: AACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGAGTTGTACAGAGCCTaGTTCTCCTTAGCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLELYRA*FSLAEN
Trigger: GTTTTCTGCTAAGGAGAACAAGGCTCTGTACAACTC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS TCA 90 bp TTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTaGTCTCTGAGGACAGGTGCCCATTTGGTTTCAGCATCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: FILWRKTPPIFLSSL*SLRTGAHLVSASSP
Trigger: TGGAGAAGATGCTGAAACCAAATGGGCACCTGTCCTCAGAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCTTGGCTGCTTCCACATaGCTGCTGGTACCATTACTG +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLLAAST*LLVPLL
Trigger: CAGTAATGGTACCAGCAGCAATGTGGAAGCAGCCAA...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTATCTTCTGCAACTAGTTaGCTAAATTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLSSATS*LNSLFL
Trigger: CAAGAACAACGAATTTAGCAAACTAGTTGCAGAAGA...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTGTACACAGCAGCATTaGGATCATGAGGAATGTCCA +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGCTQQH*DHEECP
Trigger: TGGACATTCCTCATGATCCAAATGCTGCTGTGTACA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTTGTACACAGCAGCATTaGGATCATGAGGAATGTCCA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTCTQQH*DHEECP
Trigger: TGGACATTCCTCATGATCCAAATGCTGCTGTGTACA...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGCCAAGAATCCACTTTaGTACACAGCAGCATTTGGA +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGAKNPL*YTAAFG
Trigger: TCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATGCCAAGAATCCACTTTaGTACACAGCAGCATTTGGA +
Preference number: 5 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNAKNPL*YTAAFG
Trigger: TCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGC...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAAGGCCTTTTCTGGCTaGTATTCATCCTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLKAFSG*YSSFCK
Trigger: CTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTGCCACACAATTGATTTaGTTTATCCACCCTTGCATT +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCATQLI*FIHPCI
Trigger: AATGCAAGGGTGGATAAACAAAATCAATTGTGTGGC...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGCCACACAATTGATTTaGTTTATCCACCCTTGCATT +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHATQLI*FIHPCI
Trigger: AATGCAAGGGTGGATAAACAAAATCAATTGTGTGGC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGATTACTCAGTAGCTCTTaGCCTCCTTCCTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRLLSSS*PPSLRM
Trigger: CATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAA...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGACGTTACGCTTGACTTaGGCAGTGATTGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGTLRLT*AVIGEV
Trigger: TACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCTGACACGTTACGCTaGACTTTGGCAGTGATTGGA +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSDTLR*TLAVIG
Trigger: TCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGILKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTAGAAACCCAAAAGGTTTaGTTAGTAAGACAATGGAGA +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLETQKV*LVRQWR
Trigger: TCTCCATTGTCTTACTAACAAAACCTTTTGGGTTTC...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAAAGGAGAATGCCTTaGGATTTCAGTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKRRMP*DFSPSF
Trigger: AAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGTGACAGCATTTTCTTaGATGACTGACATACTGCCT +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIVTAFS*MTDILP
Trigger: AGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCAC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAACTAGAAACAGCATCTaGGTCCAGTACCTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRTRNSI*VQYLCS
Trigger: GCTACAAAGGTACTGGACCAAGATGCTGTTTCTAGT...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAAAAACTTTCCTCCGTaGTTACTTCAGCTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCKNFPP*LLQLKE
Trigger: CTCTTTCAGCTGAAGTAACAACGGAGGAAAGTTTTT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTTTCTCAAGATGCTGTTaGTTTTCCTGTAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCFSRCC*FSCRKT
Trigger: AGTCTTCCTACAGGAAAACAAACAGCATCTTGAGAA...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TGCAAGCATGTGTACACATGTCAGAGGTCCCAGACATGTCAACTTTTCTCCTTAACAATGCCAATTAGTTaGAGCCACAGTGAATATAAC +
Preference number: 5 (lower is better)
Translates to: CKHVYTCQRSQTCQLFSLTMPIS*SHSEYN
Trigger: GTTATATTCACTGTGGCTCAAACTAATTGGCATTGT...TAAGGAGAAAAGTTGACATGTCTGGGACCTCTGACATGTGTACACATGCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATGAGCAGGCTGCTATTTaGTCACTAATTACTTTCACA +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHEQAAI*SLITFT
Trigger: TGTGAAAGTAATTAGTGACAAAATAGCAGCCTGCTC...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGTCATTCTTGATTGAGTaGTACAGAGCCTTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLSFLIE*YRALFS
Trigger: GGAGAACAAGGCTCTGTACAACTCAATCAAGAATGA...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCAGGACAGGTGCCCATTaGGTTTCAGCATCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLRTGAH*VSASSP
Trigger: TGGAGAAGATGCTGAAACCAAATGGGCACCTGTCCT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp AGGGACTACATTTCCATCAGAGGACTCTCTCCCATCATGGTTTTGCTGAGATTACTTACTTTCATCCTTTaGCAAGTAAAGAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: RDYISIRGLSPIMVLLRLLTFIL*QVKNCS
Trigger: GGAACAGTTCTTTACTTGCAAAAGGATGAAAGTAAG...TAATCTCAGCAAAACCATGATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615573.4
CDS-3UTR CAA 90 bp TTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCATCTTGTGAAGCAATGCTAAATTCGTTGTTCTaGCCAAGGTGTTTTGCAACA +
Preference number: 5 (lower is better)
Translates to: LRSIIAQVRQWTPSCEAMLNSLF*PRCFAT
Trigger: TGTTGCAAAACACCTTGGCAAGAACAACGAATTTAG...CATTGCTTCACAAGATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CAA 90 bp ACCATGGCTTTACAGCAGGTTTTCTCTAATTCACTGGAACCATGCTATTCCTGTAGTTTGCTAAATTCGTaGTTCTTGCCAAGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: TMALQQVFSNSLEPCYSCSLLNS*FLPRCF
Trigger: AAAACACCTTGGCAAGAACAACGAATTTAGCAAACT...ACAGGAATAGCATGGTTCCAGTGAATTAGAGAAAACCTGCTGTAAAGCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp CCATGTAGATCGGTATTAAGAAGCATTATTGCACAGGTAAGGCAATGGACTCCAAGTTTGCTAAATTCGTaGTTCTTGCCAAGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: PCRSVLRSIIAQVRQWTPSLLNS*FLPRCF
Trigger: AAAACACCTTGGCAAGAACAACGAATTTAGCAAACT...TGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CAA 90 bp TCGTTTTCCTCTTGGAGTCTTCTTTCCATCCATATCTGCATGAATTTTCCGAGCTCTTCTGCAACTAGTTaGCTAAATTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SFSSWSLLSIHICMNFPSSSATS*LNSLFL
Trigger: CAAGAACAACGAATTTAGCAAACTAGTTGCAGAAGA...GCTCGGAAAATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAACTCTCTCTCGTTCTaGAGTTTCTCCCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMNSLSF*SFSHKR
Trigger: TCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATCTTCTTTCCAATATaGTGGCCATGTAGATCGGTA +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIIFFPI*WPCRSV
Trigger: TACCGATCTACATGGCCACAATATTGGAAAGAAGAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000523619.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTTACTCAGTAGCTCTTaGCCTCCTTCCTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLLSSS*PPSLRM
Trigger: CATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGACGTTACGCTTGACTTaGGCAGTGATTGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMTLRLT*AVIGEV
Trigger: TACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGAGCAGCTGATTCTTaGGTCATAGTACCTTCAACA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTRAADS*VIVPST
Trigger: TGTTGAAGGTACTATGACCAAAGAATCAGCTGCTCT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLDTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGACAGATAACTTGCTaGTGGATATGTTGGATTCAG +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRQITC*WICWIQ
Trigger: CTGAATCCAACATATCCACAAGCAAGTTATCTGTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp AAAAGGTTACACATAATCCAGGGACTACATTTCCATCAGAGGACTCTCTCCCATAGAAAGACAGATAACTaGCTTGTGGATATGTTGGAT +
Preference number: 5 (lower is better)
Translates to: KRLHIIQGLHFHQRTLSHRKTDN*LVDMLD
Trigger: ATCCAACATATCCACAAGCAAGTTATCTGTCTTTCT...ATGGGAGAGAGTCCTCTGATGGAAATGTAGTCCCTGGATTATGTGTAACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGAAACCTATCTTAGCCTaGGAAAGCCACCCAGATTTT +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGKPILA*ESHPDF
Trigger: AAAATCTGGGTGGCTTTCCAAGGCTAAGATAGGTTT...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAAAAGGAGAATGCCTTaGGATTTCAGTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLKRRMP*DFSPSF
Trigger: AAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTTT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTACTGTTCCTTTCAAAAGAAGACCACCACAAACGCCATCGTTTTCTAGAAGAGAATGTGCAGATGCATaGTTCACCCAAACAAATGTC +
Preference number: 5 (lower is better)
Translates to: ITVPFKRRPPQTPSFSRRECADA*FTQTNV
Trigger: GACATTTGTTTGGGTGAACAATGCATCTGCACATTC...TCTTCTAGAAAACGATGGCGTTTGTGGTGGTCTTCTTTTGAAAGGAACAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATAATTCATATTTGGCCTaGGCAACACTCTGGGAATGT +
Preference number: 5 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNNSYLA*ATLWEC
Trigger: ACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATT...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCTAAATTCGTTGTTCTaGCCAAGGTGTTTTGCAACA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLNSLF*PRCFAT
Trigger: TGTTGCAAAACACCTTGGCAAGAACAACGAATTTAG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp AATATCTATTGGAGAAGTGTATTAAAACTCTCTCTCGTTCTTGAGTTTCTCCCAAACTCTCTCTCGTTCTaGAGTTTCTCCCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: NIYWRSVLKLSLVLEFLPNSLSF*SFSHKR
Trigger: TCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTT...TGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACACTTCTCCAATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCAACTCTCTCTCGTTCTaGAGTTTCTCCCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLNSLSF*SFSHKR
Trigger: TCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp TGGATCATGAGGAATGTCCAAAAATGGGTTAGTAGTACTTCCAATACGACTGATGCCACACAATTGATTTaGTTTATCCACCCTTGCATT +
Preference number: 5 (lower is better)
Translates to: WIMRNVQKWVSSTSNTTDATQLI*FIHPCI
Trigger: AATGCAAGGGTGGATAAACAAAATCAATTGTGTGGC...ATCAGTCGTATTGGAAGTACTACTAACCCATTTTTGGACATTCCTCATGATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGACAGCTGCCACACAATaGATTTTGTTTATCCACCCT +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMTAATQ*ILFIHP
Trigger: AGGGTGGATAAACAAAATCAATTGTGTGGCAGCTGT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTTGAAAAACCCTATTTaGCTCCATGACCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLKNPI*LHDQHF
Trigger: GAAGTGCTGGTCATGGAGCAAAATAGGGTTTTTCAA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTATAAACAAAGTCACTTaGCACCTGCAACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTINKVT*HLQPED
Trigger: ATCTTCTGGTTGCAGGTGCAAAGTGACTTTGTTTAT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGATACATGGGCCATATaGGTAACTATCCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGDTWAI*VTILFV
Trigger: AACAAACAGGATAGTTACCAATATGGCCCATGTATC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GCATTTTCTTTGATGACTGACATACTGCCTGTAAGAATAGTCTCCAAAAGCCTGAGAAAGACAGATAACTaGCTTGTGGATATGTTGGAT +
Preference number: 5 (lower is better)
Translates to: AFSLMTDILPVRIVSKSLRKTDN*LVDMLD
Trigger: ATCCAACATATCCACAAGCAAGTTATCTGTCTTTCT...CAGGCTTTTGGAGACTATTCTTACAGGCAGTATGTCAGTCATCAAAGAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GAATGCCTTTGGATTTCAGTCCTTCCTTTATGGATGAGAGATGGAAAAGGAATCGAAACCCAAAAGGTTTaGTTAGTAAGACAATGGAGA +
Preference number: 5 (lower is better)
Translates to: ECLWISVLPLWMRDGKGIETQKV*LVRQWR
Trigger: TCTCCATTGTCTTACTAACAAAACCTTTTGGGTTTC...GATTCCTTTTCCATCTCTCATCCATAAAGGAAGGACTGAAATCCAAAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGTGACAGCATTTTCTTaGATGACTGACATACTGCCT +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMVTAFS*MTDILP
Trigger: AGGCAGTATGTCAGTCATCAAAGAAAATGCTGTCAC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TATTTCTATAACACTATTCCTAAGAGCTTAGCTCTCTGCCCTGCAAAGGGAAATTTCTCAAGATGCTGTTaGTTTTCCTGTAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: YFYNTIPKSLALCPAKGNFSRCC*FSCRKT
Trigger: AGTCTTCCTACAGGAAAACAAACAGCATCTTGAGAA...ATTTCCCTTTGCAGGGCAGAGAGCTAAGCTCTTAGGAATAGTGTTATAGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCACTTTCAGCAGATCCTaGGAGAAATCAACACCCTCA +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLTFSRS*EKSTPS
Trigger: TGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp CCTTTTCTGGCTTGTATTCATCCTTTTGCAAGTAAAGAACTGTTCCCTTCAGTAAGTTTGCTAAATTCGTaGTTCTTGCCAAGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: PFLACIHPFASKELFPSVSLLNS*FLPRCF
Trigger: AAAACACCTTGGCAAGAACAACGAATTTAGCAAACT...TACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTAGTTTGCTAAATTCGTaGTTCTTGCCAAGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTSLLNS*FLPRCF
Trigger: AAAACACCTTGGCAAGAACAACGAATTTAGCAAACT...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTCTTGTATTCATCCTTTaGCAAGTAAAGAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTLVFIL*QVKNCS
Trigger: GGAACAGTTCTTTACTTGCAAAAGGATGAATACAAG...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCCTGTATGGTCAATTTaGCAACAACACTATGACCAA +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMPVWSI*QQHYDQ
Trigger: TTGGTCATAGTGTTGTTGCAAAATTGACCATACAGG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp TGCTTTCTATCCTCTGCATCTAAGAGGAATAAAAAGGTTACACATAATCCAGGGGAAACCCAAAAGGTTTaGTTAGTAAGACAATGGAGA +
Preference number: 5 (lower is better)
Translates to: CFLSSASKRNKKVTHNPGETQKV*LVRQWR
Trigger: TCTCCATTGTCTTACTAACAAAACCTTTTGGGTTTC...CCCTGGATTATGTGTAACCTTTTTATTCCTCTTAGATGCAGAGGATAGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp GATTCAGTGAGAGGCTACAAAAATCAATCTGATACATGGGCCATATTGGTAACTGAAACCCAAAAGGTTTaGTTAGTAAGACAATGGAGA +
Preference number: 5 (lower is better)
Translates to: DSVRGYKNQSDTWAILVTETQKV*LVRQWR
Trigger: TCTCCATTGTCTTACTAACAAAACCTTTTGGGTTTC...AGTTACCAATATGGCCCATGTATCAGATTGATTTTTGTAGCCTCTCACTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCAAAGCCCCTCTCTATaGCTATCAATAATCTATCAC +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMQSPSL*LSIIYH
Trigger: GTGATAGATTATTGATAGCAATAGAGAGGGGCTTTG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAAAAGGAGAATGCCTTaGGATTTCAGTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMKRRMP*DFSPSF
Trigger: AAAGGAAGGACTGAAATCCAAAGGCATTCTCCTTTT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
ENST00000614430.3
ENST00000615573.4
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGGAGCAGGCTGCTATTTaGTCACTAATTACTTTCACA +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMEQAAI*SLITFT
Trigger: TGTGAAAGTAATTAGTGACAAAATAGCAGCCTGCTC...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCCTAAATTCGTTGTTCTaGCCAAGGTGTTTTGCAACA +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLLNSLF*PRCFAT
Trigger: TGTTGCAAAACACCTTGGCAAGAACAACGAATTTAG...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGAGTTTGCTAAATTCGTaGTTCTTGCCAAGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSLLNS*FLPRCF
Trigger: AAAACACCTTGGCAAGAACAACGAATTTAGCAAACT...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGTCTTCTGCAACTAGTTaGCTAAATTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMSSATS*LNSLFL
Trigger: CAAGAACAACGAATTTAGCAAACTAGTTGCAGAAGA...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCATCTTCTTTCCAATATaGTGGCCATGTAGATCGGTA +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLIFFPI*WPCRSV
Trigger: TACCGATCTACATGGCCACAATATTGGAAAGAAGAT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp ATTCAGATTTTATACATGGGCCACCTGTATGGTCAATTTTGCAACAACACTATGCTTGTATTCATCCTTTaGCAAGTAAAGAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: IQILYMGHLYGQFCNNTMLVFIL*QVKNCS
Trigger: GGAACAGTTCTTTACTTGCAAAAGGATGAATACAAG...CATAGTGTTGTTGCAAAATTGACCATACAGGTGGCCCATGTATAAAATCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000428502.6
ENST00000440756.4
ENST00000523619.5
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCAGTTTGCTAAATTCGTaGTTCTTGCCAAGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLSLLNS*FLPRCF
Trigger: AAAACACCTTGGCAAGAACAACGAATTTAGCAAACT...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS-3UTR CAA 90 bp AATATCTATTGGAGAAGTGTATTAAAACTCTCTCTCGTTCTTGAGTTTCTCCCATCTTCTGCAACTAGTTaGCTAAATTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NIYWRSVLKLSLVLEFLPSSATS*LNSLFL
Trigger: CAAGAACAACGAATTTAGCAAACTAGTTGCAGAAGA...TGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACACTTCTCCAATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517971.5
CDS-3UTR CAA 90 bp TGTTTATTTTATGGAGAAAGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCTCTTCTGCAACTAGTTaGCTAAATTCGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: CLFYGERHLQYFSVVCDLSSATS*LNSLFL
Trigger: CAAGAACAACGAATTTAGCAAACTAGTTGCAGAAGA...GAGATCACAGACTACTGAGAAATATTGGAGGTGTCTTTCTCCATAAAATAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS TCA 72 bp CACGCACCTAGGCGTCCCTCGGGGTCCCGGCCTCTCTaGCCGGGCTCCCCCGGCACCGATCCGCGGCCGGAG +
Preference number: 6 (lower is better)
Translates to: HAPRRPSGSRPL*PGSPGTDPRPE
Trigger: CTCCGGCCGCGGATCGGTGCCGGGGGAGCCCGGTCAGAGAGGCCGGGACCCCGAGGGACGCCTAGGTGCGTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521841.1
CDS CAA 72 bp TCCTCTCAGGAAGGGCCGTGTGACTGGAGCCGCGAGTaGGGCGCCGTCTCGCCGGGGCTGGAGGTACGCGGG +
Preference number: 6 (lower is better)
Translates to: SSQEGPCDWSRE*GAVSPGLEVRG
Trigger: CCCGCGTACCTCCAGCCCCGGCGAGACGGCGCCCAACTCGCGGCTCCAGTCACACGGCCCTTCCTGAGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521841.1
CDS CAA 90 bp CCTGGTGTTTCCTCTCAGGAAGGGCCGTGTGACTGGAGCCGCGAGTaGGGCGCCGTCTCGCCGGGGCTGGAGGTACGCGGGCTTCGGGAC +
Preference number: 6 (lower is better)
Translates to: PGVSSQEGPCDWSRE*GAVSPGLEVRGLRD
Trigger: GTCCCGAAGCCCGCGTACCTCCAGCCCCGGCGAGACGGCGCCCAACTCGCGGCTCCAGTCACACGGCCCTTCCTGAGAGGAAACACCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521841.1
CDS CCA 72 bp TTCCCTGGTGTTTCCTCTCAGGAAGGGCCGTGTGACTaGAGCCGCGAGTTGGGCGCCGTCTCGCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: FPGVSSQEGPCD*SRELGAVSPGL
Trigger: CAGCCCCGGCGAGACGGCGCCCAACTCGCGGCTCCAGTCACACGGCCCTTCCTGAGAGGAAACACCAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521841.1
CDS TCA 72 bp TGCTTTCCCTGGTGTTTCCTCTCAGGAAGGGCCGTGTaGCTGGAGCCGCGAGTTGGGCGCCGTCTCGCCGGG +
Preference number: 6 (lower is better)
Translates to: CFPWCFLSGRAV*LEPRVGRRLAG
Trigger: CCCGGCGAGACGGCGCCCAACTCGCGGCTCCAGTCACACGGCCCTTCCTGAGAGGAAACACCAGGGAAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521841.1
CDS TCA 72 bp GGGGGTCCATGCCCCACAGATCCTGGGTGGCAGAAGTaGCTGGCCAGTGCTTCCAGCCCATGGAGGGACTGC +
Preference number: 6 (lower is better)
Translates to: GGPCPTDPGWQK*LASASSPWRDC
Trigger: GCAGTCCCTCCATGGGCTGGAAGCACTGGCCAGTCACTTCTGCCACCCAGGATCTGTGGGGCATGGACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 72 bp GCATCCCTGCATCGGGGGTCCATGCCCCACAGATCCTaGGTGGCAGAAGTGACTGGCCAGTGCTTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: ASLHRGSMPHRS*VAEVTGQCFQP
Trigger: GGGCTGGAAGCACTGGCCAGTCACTTCTGCCACCCAGGATCTGTGGGGCATGGACCCCCGATGCAGGGATGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS GCA 72 bp TCCAACCGTTCCAAGGCTCTCACGCTGGAGGAACTCTaGGGGGTTGTGCCTGAGCAGCTCCTGAGCGCCGTG +
Preference number: 6 (lower is better)
Translates to: SNRSKALTLEEL*GVVPEQLLSAV
Trigger: CACGGCGCTCAGGAGCTGCTCAGGCACAACCCCGCAGAGTTCCTCCAGCGTGAGAGCCTTGGAACGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000521878.1
ENST00000614430.3
CDS GCA 72 bp AGCCCAGAGTGGCAGCCAGTAAGAGGCTGGACACCCTaGTGCTCTTGTGGGTGGCATGGCAGAGCCTCACCA +
Preference number: 6 (lower is better)
Translates to: SPEWQPVRGWTP*CSCGWHGRASP
Trigger: TGGTGAGGCTCTGCCATGCCACCCACAAGAGCAGCAGGGTGTCCAGCCTCTTACTGGCTGCCACTCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 72 bp GCTGGTGTGCACAGCTGGACAGTACCTGTAGAGCCATaGCCTTGTCGCCTGCGCTGTGGTACCTGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: AGVHSWTVPVEP*PCRLRCGTCGL
Trigger: GAGGCCACAGGTACCACAGCGCAGGCGACAAGGGCATGGCTCTACAGGTACTGTCCAGCTGTGCACACCAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 72 bp GTCCATGCCCCACAGATCCTGGGTGGCAGAAGTGACTaGCCAGTGCTTCCAGCCCATGGAGGGACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VHAPQILGGRSD*PVLPAHGGTAA
Trigger: AGCAGCAGTCCCTCCATGGGCTGGAAGCACTGGCCAGTCACTTCTGCCACCCAGGATCTGTGGGGCATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CAA 90 bp CCTTGCTGGTGTGCACAGCTGGACAGTACCTGTAGAGCCATGCCCTaGTCGCCTGCGCTGTGGTACCTGTGGCCTCCTTACAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PCWCAQLDSTCRAMP*SPALWYLWPPYSSW
Trigger: CCAGGAGCTGTAAGGAGGCCACAGGTACCACAGCGCAGGCGACAAGGGCATGGCTCTACAGGTACTGTCCAGCTGTGCACACCAGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 72 bp ACCATACAGACACCAAGAAGAGCCCATCGCAACCCCTaGGGTGCGCCTGGACCATCCTTCCTCTCCGAAGCC +
Preference number: 6 (lower is better)
Translates to: TIQTPRRAHRNP*GAPGPSFLSEA
Trigger: GGCTTCGGAGAGGAAGGATGGTCCAGGCGCACCCCAGGGGTTGCGATGGGCTCTTCTTGGTGTCTGTATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000517971.5
ENST00000518315.5
ENST00000519633.1
ENST00000519653.5
CDS CCA 72 bp TGTCTTGGAGGCAGGGGCCTGGCAATGCCTGTGATGTaGGGATCTGCAATCACCACCCCTGCTTACGTCCGG +
Preference number: 6 (lower is better)
Translates to: CLGGRGLAMPVM*GSAITTPAYVR
Trigger: CCGGACGTAAGCAGGGGTGGTGATTGCAGATCCCCACATCACAGGCATTGCCAGGCCCCTGCCTCCAAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 72 bp AGAGCCATGCCCTTGTCGCCTGCGCTGTGGTACCTGTaGCCTCCTTACAGCTCCTGGGGAGTATTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: RAMPLSPALWYL*PPYSSWGVFGR
Trigger: CCTGCCAAATACTCCCCAGGAGCTGTAAGGAGGCCACAGGTACCACAGCGCAGGCGACAAGGGCATGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS TCA 72 bp GAAACCAACACTGCCTGCAGAGTGGCAGGTCACTGCTaGGCTCCCGAGGGAGGCCAAAGGACAAGATGGCTC +
Preference number: 6 (lower is better)
Translates to: ETNTACRVAGHC*APEGGQRTRWL
Trigger: GAGCCATCTTGTCCTTTGGCCTCCCTCGGGAGCTCAGCAGTGACCTGCCACTCTGCAGGCAGTGTTGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 72 bp TGGGCGTCCCATGGAGCTGCTTCGATCACATCCCCCTaGGTGCTCTCTCCCAAGAGCAGACCTCTGCTCTTT +
Preference number: 6 (lower is better)
Translates to: WASHGAASITSP*VLSPKSRPLLF
Trigger: AAAGAGCAGAGGTCTGCTCTTGGGAGAGAGCACCCAGGGGGATGTGATCGAAGCAGCTCCATGGGACGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 72 bp GTACCTGTGGCCTCCTTACAGCTCCTGGGGAGTATTTaGCAGGTCTCGGCGCCTCTCCTCAGCACAGTCCTT +
Preference number: 6 (lower is better)
Translates to: VPVASLQLLGSI*QVSAPLLSTVL
Trigger: AAGGACTGTGCTGAGGAGAGGCGCCGAGACCTGCCAAATACTCCCCAGGAGCTGTAAGGAGGCCACAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS CCA 72 bp AGTACCTGTAGAGCCATGCCCTTGTCGCCTGCGCTGTaGTACCTGTGGCCTCCTTACAGCTCCTGGGGAGTA +
Preference number: 6 (lower is better)
Translates to: STCRAMPLSPAL*YLWPPYSSWGV
Trigger: TACTCCCCAGGAGCTGTAAGGAGGCCACAGGTACCACAGCGCAGGCGACAAGGGCATGGCTCTACAGGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS TCA 72 bp CCGGATAGAATCCTCCCGGGAGTATTTCACGGAACCTaGGGTCCTCACCCGTACCTTGCTGGCACTCTGGAC +
Preference number: 6 (lower is better)
Translates to: PDRILPGVFHGT*GPHPYLAGTLD
Trigger: GTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATACTCCCGGGAGGATTCTATCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000614430.3
ENST00000615573.4
CDS GCA 72 bp CGTCCCATGGAGCTGCTTCGATCACATCCCCCTGGGTaGTCTCTCCCAAGAGCAGACCTCTGCTCTTTCAAG +
Preference number: 6 (lower is better)
Translates to: RPMELLRSHPPG*SLPRADLCSFK
Trigger: CTTGAAAGAGCAGAGGTCTGCTCTTGGGAGAGAGCACCCAGGGGGATGTGATCGAAGCAGCTCCATGGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 72 bp AAAAGGCACTTTCCAACCGTTCCAAGGCTCTCACGCTaGAGGAACTCTGCGGGGTTGTGCCTGAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: KRHFPTVPRLSR*RNSAGLCLSSS
Trigger: GGAGCTGCTCAGGCACAACCCCGCAGAGTTCCTCCAGCGTGAGAGCCTTGGAACGGTTGGAAAGTGCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428502.6
ENST00000521878.1
ENST00000614430.3
CDS TCA 72 bp GCCACTGGATCCCTCAGGGGCTCAGGGATACGAACTTaGAAGAAGTTGAAGGAGGACGTCCCCCTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: ATGSLRGSGIRT*KKLKEDVPLFP
Trigger: TGGGAAGAGGGGGACGTCCTCCTTCAACTTCTTTCAAGTTCGTATCCCTGAGCCCCTGAGGGATCCAGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519851.5
CDS CCA 72 bp AAGAGGCTGGACACCCTGCTGCTCTTGTGGGTGGCATaGCAGAGCCTCACCATCAAATTCCAGAGAAGCCCT +
Preference number: 6 (lower is better)
Translates to: KRLDTLLLLWVA*QSLTIKFQRSP
Trigger: AGGGCTTCTCTGGAATTTGATGGTGAGGCTCTGCCATGCCACCCACAAGAGCAGCAGGGTGTCCAGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 72 bp TTCCACTCCTTGAAATTCCACATGTTTGACCCGGCCTaGGCGTCCCATGGAGCTGCTTCGATCACATCCCCC +
Preference number: 6 (lower is better)
Translates to: FHSLKFHMFDPA*ASHGAASITSP
Trigger: GGGGGATGTGATCGAAGCAGCTCCATGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTCAAGGAGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 72 bp TGCCACTGGATCCCTCAGGGGCTCAGGGATACGAACTaGAAAGAAGTTGAAGGAGGACGTCCCCCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: CHWIPQGLRDTN*KEVEGGRPPLP
Trigger: GGGAAGAGGGGGACGTCCTCCTTCAACTTCTTTCAAGTTCGTATCCCTGAGCCCCTGAGGGATCCAGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519851.5
CDS GCA 72 bp GAGCTCCCGAGGGAGGCCAAAGGACAAGATGGCTCCTaGACACAGACAGCCCCTTTCCTCCCATTATTCATT +
Preference number: 6 (lower is better)
Translates to: ELPREAKGQDGS*TQTAPFLPLFI
Trigger: AATGAATAATGGGAGGAAAGGGGCTGTCTGTGTGCAGGAGCCATCTTGTCCTTTGGCCTCCCTCGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 72 bp CAAGAGCAGACCTCTGCTCTTTCAAGAAACCAACACTaGCTGCAGAGTGGCAGGTCACTGCTGAGCTCCCGA +
Preference number: 6 (lower is better)
Translates to: QEQTSALSRNQH*LQSGRSLLSSR
Trigger: TCGGGAGCTCAGCAGTGACCTGCCACTCTGCAGGCAGTGTTGGTTTCTTGAAAGAGCAGAGGTCTGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 72 bp GACGCCACTAGAATAGCCCATCACGATGCCACCATCTaGAGACACACTCAGGATATCCTGATGTCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: DATRIAHHDATI*RHTQDILMSSP
Trigger: GGGGGAGGACATCAGGATATCCTGAGTGTGTCTGCAGATGGTGGCATCGTGATGGGCTATTCTAGTGGCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 90 bp CTGGGTCTCTCTCTTGTCTCCTCCTGTCCACAGTATTTCCACTCCTaGAAATTCCACATGTTTGACCCGGCCTGGGCGTCCCATGGAGCT +
Preference number: 6 (lower is better)
Translates to: LGLSLVSSCPQYFHS*KFHMFDPAWASHGA
Trigger: AGCTCCATGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTCAAGGAGTGGAAATACTGTGGACAGGAGGAGACAAGAGAGAGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 72 bp GCCTCAAAGATCCTGAGCCTTAATCTTGGCTACGGCTaGAAAAGCCACCACCGGTGGCCATGTAGATCGGTA +
Preference number: 6 (lower is better)
Translates to: ASKILSLNLGYG*KSHHRWPCRSV
Trigger: TACCGATCTACATGGCCACCGGTGGTGGCTTTTGCAGCCGTAGCCAAGATTAAGGCTCAGGATCTTTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518315.5
CDS CAA 90 bp TCCTCCCGGGAGTATTTCACGGAACCTGAGGTCCTCACCCGTACCTaGCTGGCACTCTGGACACTATTCACGCCAATCATTTTCGAAGGT +
Preference number: 6 (lower is better)
Translates to: SSREYFTEPEVLTRT*LALWTLFTPIIFEG
Trigger: ACCTTCGAAAATGATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATACTCCCGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS TCA 72 bp TCCACAGTATTTCCACTCCTTGAAATTCCACATGTTTaGCCCGGCCTGGGCGTCCCATGGAGCTGCTTCGAT +
Preference number: 6 (lower is better)
Translates to: STVFPLLEIPHV*PGLGVPWSCFD
Trigger: ATCGAAGCAGCTCCATGGGACGCCCAGGCCGGGTCAAACATGTGGAATTTCAAGGAGTGGAAATACTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS TCA 72 bp GTTGCAAGTACAAACTGCTACACACTGACTCCGCAGTaGCATTCTCCCAGAATGCCACTGGATCCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: VASTNCYTLTPQ*HSPRMPLDPSG
Trigger: CCCTGAGGGATCCAGTGGCATTCTGGGAGAATGTCACTGCGGAGTCAGTGTGTAGCAGTTTGTACTTGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518303.5
ENST00000519851.5
CDS CAA 72 bp GACCATGATCCACAGACCAGCTTTGAGGAGCAAGGCTaGAAGGCGCTAAAGCTTCCGAATGAAGCCGTGTTC +
Preference number: 6 (lower is better)
Translates to: DHDPQTSFEEQG*KALKLPNEAVF
Trigger: GAACACGGCTTCATTCGGAAGCTTTAGCGCCTTCAAGCCTTGCTCCTCAAAGCTGGTCTGTGGATCATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520789.1
CDS CAA 90 bp TTCCCTGGTGACCATGATCCACAGACCAGCTTTGAGGAGCAAGGCTaGAAGGCGCTAAAGCTTCCGAATGAAGCCGTGTTCAAAGTACGC +
Preference number: 6 (lower is better)
Translates to: FPGDHDPQTSFEEQG*KALKLPNEAVFKVR
Trigger: GCGTACTTTGAACACGGCTTCATTCGGAAGCTTTAGCGCCTTCAAGCCTTGCTCCTCAAAGCTGGTCTGTGGATCATGGTCACCAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520789.1
CDS CCA 72 bp CCAAAATGGTTTCAAACTGGGAGCTGTACACGTCGGTaGAGTCCTCCGTATATCCAGGCCCAAGGATGTCTT +
Preference number: 6 (lower is better)
Translates to: PKWFQTGSCTRR*SPPYIQAQGCL
Trigger: AAGACATCCTTGGGCCTGGATATACGGAGGACTCCACCGACGTGTACAGCTCCCAGTTTGAAACCATTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 72 bp GAACCTGAGGTCCTCACCCGTACCTTGCTGGCACTCTaGACACTATTCACGCCAATCATTTTCGAAGGTCAA +
Preference number: 6 (lower is better)
Translates to: EPEVLTRTLLAL*TLFTPIIFEGQ
Trigger: TTGACCTTCGAAAATGATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS CCA 72 bp ATTTCACGGAACCTGAGGTCCTCACCCGTACCTTGCTaGCACTCTGGACACTATTCACGCCAATCATTTTCG +
Preference number: 6 (lower is better)
Translates to: ISRNLRSSPVPC*HSGHYSRQSFS
Trigger: CGAAAATGATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTCCGTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS GCA 72 bp AGTATTTCACGGAACCTGAGGTCCTCACCCGTACCTTaGTGGCACTCTGGACACTATTCACGCCAATCATTT +
Preference number: 6 (lower is better)
Translates to: SISRNLRSSPVP*WHSGHYSRQSF
Trigger: AAATGATTGGCGTGAATAGTGTCCAGAGTGCCAGCAAGGTACGGGTGAGGACCTCAGGTTCCGTGAAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428502.6
ENST00000614430.3
CDS CAA 72 bp GATGAGATGAGATGGCGTGGCACTTTGGAAGACTCTTaGCTGTCAGGAGAGGCTGTTCTTTGCAGTGATGTC +
Preference number: 6 (lower is better)
Translates to: DEMRWRGTLEDS*LSGEAVLCSDV
Trigger: GACATCACTGCAAAGAACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCTCATCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 72 bp CACAAACCAGCTGATGAGATGAGATGGCGTGGCACTTaGGAAGACTCTTTGCTGTCAGGAGAGGCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: HKPADEMRWRGT*EDSLLSGEAVL
Trigger: AAGAACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 90 bp AATTCATATTTGGCCTTGGCAACACTCTGGGAATGTGCAGATGCATaGTTCACCCAAACAAATGTCTCTGCCGCTGCGCTCCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: NSYLALATLWECADA*FTQTNVSAAALLPS
Trigger: GGAAGGAAGGAGCGCAGCGGCAGAGACATTTGTTTGGGTGAACAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327040.13
ENST00000440756.4
CDS TCA 72 bp TGCAGACACACTCAGGATATCCTGATGTCCTCCCCCTaGTGTCCTCTCCAAGAACTGACCACCTTCTTTAAT +
Preference number: 6 (lower is better)
Translates to: CRHTQDILMSSP*CPLQELTTFFN
Trigger: ATTAAAGAAGGTGGTCAGTTCTTGGAGAGGACATCAGGGGGAGGACATCAGGATATCCTGAGTGTGTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 90 bp AAACCAGCTGATGAGATGAGATGGCGTGGCACTTTGGAAGACTCTTaGCTGTCAGGAGAGGCTGTTCTTTGCAGTGATGTCTCAAAATCT +
Preference number: 6 (lower is better)
Translates to: KPADEMRWRGTLEDS*LSGEAVLCSDVSKS
Trigger: AGATTTTGAGACATCACTGCAAAGAACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 90 bp CTTGAATTACACAAACCAGCTGATGAGATGAGATGGCGTGGCACTTaGGAAGACTCTTTGCTGTCAGGAGAGGCTGTTCTTTGCAGTGAT +
Preference number: 6 (lower is better)
Translates to: LELHKPADEMRWRGT*EDSLLSGEAVLCSD
Trigger: ATCACTGCAAAGAACAGCCTCTCCTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTTTGTGTAATTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 90 bp AATTCATATTTGGCCTTGGCAACACTCTGGGAATGTGCAGATGCATaGTTCACCCAAACAAATGTCTCTGCCTTGAGAGGCAGAGTGGCA +
Preference number: 6 (lower is better)
Translates to: NSYLALATLWECADA*FTQTNVSALRGRVA
Trigger: TGCCACTCTGCCTCTCAAGGCAGAGACATTTGTTTGGGTGAACAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521475.1
CDS GCA 72 bp GCTGTTCTTTGCAGTGATGTCTCAAAATCTATAGGATaGTGGGTCTCTCTCTTGTCTCCTCCTGTCCACAGT +
Preference number: 6 (lower is better)
Translates to: AVLCSDVSKSIG*WVSLLSPPVHS
Trigger: ACTGTGGACAGGAGGAGACAAGAGAGAGACCCAGCATCCTATAGATTTTGAGACATCACTGCAAAGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS GCA 72 bp ATGTGCAGATGCATTGTTCACCCAAACAAATGTCTCTaGCTACAGCACCAAGTAAAACACGTACTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: MCRCIVHPNKCL*LQHQVKHVLLG
Trigger: CCCCAGCAGTACGTGTTTTACTTGGTGCTGTAGGCAGAGACATTTGTTTGGGTGAACAATGCATCTGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520789.1
CDS CAA 90 bp TTTCACCCCAGCATTGCTTCGTCAGCAAACAGTCTGCCCATAATTTaGTCAGGAATTGAAGAGCATTCTCCCATTCCATCTGCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: FHPSIASSANSLPII*SGIEEHSPIPSAQQ
Trigger: TTGCTGAGCAGATGGAATGGGAGAATGCTCTTCAATTCCTGACAAAATTATGGGCAGACTGTTTGCTGACGAAGCAATGCTGGGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518303.5
ENST00000519851.5
CDS TCA 72 bp TTACGACTGGCAGTGTCCAGCTCTTTTTCCACCTGCTaGACTGAAAAACTAGAAACAGCATCTTGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: LRLAVSSSFSTC*TEKLETASWSS
Trigger: ACTGGACCAAGATGCTGTTTCTAGTTTTTCAGTTCAGCAGGTGGAAAAAGAGCTGGACACTGCCAGTCGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS TCA 72 bp TTCCTCCCATTATTCATTATCTGGGAAATCTCTGCCTaGGTGTCTCCAGTTAACAGCGCGGTGAGATCTTTC +
Preference number: 6 (lower is better)
Translates to: FLPLFIIWEISA*VSPVNSAVRSF
Trigger: GAAAGATCTCACCGCGCTGTTAACTGGAGACACTCAGGCAGAGATTTCCCAGATAATGAATAATGGGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS TCA 72 bp AGACACCTCCAATATTTCTCAGTAGTCTGTGATCTCTaGGGACAGGTGCCCATTTGGTTTCAGCATCTTCTC +
Preference number: 6 (lower is better)
Translates to: RHLQYFSVVCDL*GQVPIWFQHLL
Trigger: GAGAAGATGCTGAAACCAAATGGGCACCTGTCCTCAGAGATCACAGACTACTGAGAAATATTGGAGGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS CCA 72 bp CTACTTGAATTACACAAACCAGCTGATGAGATGAGATaGCGTGGCACTTTGGAAGACTCTTTGCTGTCAGGA +
Preference number: 6 (lower is better)
Translates to: LLELHKPADEMR*RGTLEDSLLSG
Trigger: TCCTGACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTTTGTGTAATTCAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 72 bp CTCCTCTTGTTCGCTGATCCTTTCCCTGTCTCTCTCTaGTTTAGGTGTCTTCTCAAGATGCTGTTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: LLLFADPFPVSL*FRCLLKMLFVF
Trigger: GAAAACAAACAGCATCTTGAGAAGACACCTAAACCAGAGAGAGACAGGGAAAGGATCAGCGAACAAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 72 bp CATCTTCTCCAATCCCACAACACTTTCAGCAGATCCTaGGAGAAATCAACACCCTCATTTACCCCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: HLLQSHNTFSRS*EKSTPSFTPCR
Trigger: TCTGCAAGGGGTAAATGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGTGTTGTGGGATTGGAGAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS CAA 90 bp TGGTTTCAGCATCTTCTCCAATCCCACAACACTTTCAGCAGATCCTaGGAGAAATCAACACCCTCATTTACCCCTTGCAGATTTGCAATG +
Preference number: 6 (lower is better)
Translates to: WFQHLLQSHNTFSRS*EKSTPSFTPCRFAM
Trigger: CATTGCAAATCTGCAAGGGGTAAATGAGGGTGTTGATTTCTCCAAGGATCTGCTGAAAGTGTTGTGGGATTGGAGAAGATGCTGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520858.5
CDS TCA 72 bp CCCTCATTTACCCCTTGCAGATTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCAATATTGTGGCCATGT +
Preference number: 6 (lower is better)
Translates to: PSFTPCRFAMNS*QVIFFPILWPC
Trigger: ACATGGCCACAATATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000519851.5
ENST00000520858.5
ENST00000523619.5
CDS TCA 72 bp CCCTCATTTACCCCTTGCAGATTTGCAATGAACTCCTaGCAGGTCATCTTCTTTCCAATATTTACGTGGCCA +
Preference number: 6 (lower is better)
Translates to: PSFTPCRFAMNS*QVIFFPIFTWP
Trigger: TGGCCACGTAAATATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440756.4
CDS CCA 72 bp GTTCTTTGCAGTGATGTCTCAAAATCTATAGGATGCTaGGTCTCTCTCTTGTCTCCTCCTGTCCACAGTATT +
Preference number: 6 (lower is better)
Translates to: VLCSDVSKSIGC*VSLLSPPVHSI
Trigger: AATACTGTGGACAGGAGGAGACAAGAGAGAGACCCAGCATCCTATAGATTTTGAGACATCACTGCAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CCA 72 bp ACTCTGCACTGTAGTATAAAGAAGTGTTGTCCAAAATaGTTTCAAACTGGGAGCTGTACACGTCGGTGGAGT +
Preference number: 6 (lower is better)
Translates to: TLHCSIKKCCPK*FQTGSCTRRWS
Trigger: ACTCCACCGACGTGTACAGCTCCCAGTTTGAAACCATTTTGGACAACACTTCTTTATACTACAGTGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 72 bp CCTCTCCAAGAACTGACCACCTTCTTTAATGCGCTGTaGTATCATTGGAGTGAGGGGCATTTCAAAGCTAAA +
Preference number: 6 (lower is better)
Translates to: PLQELTTFFNAL*YHWSEGHFKAK
Trigger: TTTAGCTTTGAAATGCCCCTCACTCCAATGATACAACAGCGCATTAAAGAAGGTGGTCAGTTCTTGGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 90 bp GGAGCTTTCCCTTCAGATCTGCCAAATAAAAATTCATATTTGGCCTaGGCAACACTCTGGGAATGTGCAGATGCATTGTTCACCCAAACA +
Preference number: 6 (lower is better)
Translates to: GAFPSDLPNKNSYLA*ATLWECADALFTQT
Trigger: TGTTTGGGTGAACAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATTTTTATTTGGCAGATCTGAAGGGAAAGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000520789.1
ENST00000521475.1
CDS TCA 72 bp TTAAACTACTTGAATTACACAAACCAGCTGATGAGATaGGATGGCGTGGCACTTTGGAAGACTCTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: LNYLNYTNQLMR*DGVALWKTLCC
Trigger: ACAGCAAAGAGTCTTCCAAAGTGCCACGCCATCTCATCTCATCAGCTGGTTTGTGTAATTCAAGTAGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000523619.5
CDS CAA 72 bp CCTTCAGATCTGCCAAATAAAAATTCATATTTGGCCTaGGCAACACTCTGGGAATGTGCAGATGCATTGTTC +
Preference number: 6 (lower is better)
Translates to: PSDLPNKNSYLA*ATLWECADALF
Trigger: GAACAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATTTTTATTTGGCAGATCTGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000520789.1
ENST00000521475.1
CDS CAA 72 bp GAACCACTGCTCTCGACCAATGGTCTTCGTACTCTGTaGTATATACGAATCACCTGGAATCTTCTTAAAACA +
Preference number: 6 (lower is better)
Translates to: EPLLSTNGLRTL*YIRITWNLLKT
Trigger: TGTTTTAAGAAGATTCCAGGTGATTCGTATATACAACAGAGTACGAAGACCATTGGTCGAGAGCAGTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520789.1
CDS TCA 72 bp AATCAACACCCTCATTTACCCCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCTTCTTTCCAATATTGT +
Preference number: 6 (lower is better)
Translates to: NQHPHLPLADLQ*TPDRSSSFQYC
Trigger: ACAATATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGGTGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000519851.5
ENST00000520858.5
ENST00000523619.5
CDS TCA 72 bp AATCAACACCCTCATTTACCCCTTGCAGATTTGCAATaGACTCCTGACAGGTCATCTTCTTTCCAATATTTA +
Preference number: 6 (lower is better)
Translates to: NQHPHLPLADLQ*TPDRSSSFQYL
Trigger: TAAATATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGGTGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440756.4
CDS CCA 72 bp CCAAATAAAAATTCATATTTGGCCTTGGCAACACTCTaGGAATGTGCAGATGCATTGTTCACCCAAACAAAT +
Preference number: 6 (lower is better)
Translates to: PNKNSYLALATL*ECADALFTQTN
Trigger: ATTTGTTTGGGTGAACAATGCATCTGCACATTCCCAGAGTGTTGCCAAGGCCAAATATGAATTTTTATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327040.13
ENST00000440756.4
ENST00000520789.1
ENST00000521475.1
ENST00000521841.1
CDS CCA 72 bp AATGGTCTTCGTACTCTGTTGTATATACGAATCACCTaGAATCTTCTTAAAACAGAAACTGAGCAGGTTAAG +
Preference number: 6 (lower is better)
Translates to: NGLRTLLYIRIT*NLLKTETEQVK
Trigger: CTTAACCTGCTCAGTTTCTGTTTTAAGAAGATTCCAGGTGATTCGTATATACAACAGAGTACGAAGACCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520789.1
CDS TCA 72 bp CTATTGGAGAAGTGTATTAAAACTCTCTCTCGTTCTTaGGTTTCTCCCACAAGAGAGAATGCTTTAAAGAAA +
Preference number: 6 (lower is better)
Translates to: LLEKCIKTLSRS*VSPTRENALKK
Trigger: TTTCTTTAAAGCATTCTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACACTTCTCCAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286485.12
ENST00000327040.13
ENST00000440756.4
ENST00000517971.5
ENST00000518303.5
ENST00000518315.5
ENST00000518963.5
ENST00000519653.5
ENST00000519851.5
ENST00000520858.5
ENST00000523619.5